4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 24h light (+Lincomycin)
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List of experiments correlated with "24h light (+Lincomycin)"  Help Download transcriptome of top 30
Score Experiment Correlation from
24h light (+Lincomycin)		 Correlation to
24h light (+Lincomycin)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 24h light (+Lincomycin) 1.00 >More info 1.00 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
2 Col-0 norflurazon 0.83 >More info 0.74 >More info Col-0 control Original data GEO bulk
3 Col-0 +lincomycin 0.75 >More info 0.80 >More info Col-0 -lincomycin Original data GEO bulk
4 Norflurazon 0.71 >More info 0.78 >More info Col-0 Original data GEO bulk
5 Norflurazon 0.71 >More info 0.78 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
6 sicy-192 cotyledons 0.71 >More info 0.72 >More info WT cotyledons cotyledons Original data
7 gun5 norflurazon 0.76 >More info 0.61 >More info gun5 control Original data GEO bulk
8 4h light (+Lincomycin) 0.61 >More info 0.72 >More info 4h light (-Lincomycin) seedlings Original data GEO bulk
9 Shoot dark control 24h 0.65 >More info 0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
10 gun1-9 norflurazon 0.74 >More info 0.55 >More info gun1-9 control Original data GEO bulk
11 pnp1-1 3h -P 0.68 >More info 0.60 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
12 sicy-192 gun1-101 cotyledons 0.63 >More info 0.65 >More info WT cotyledons cotyledons Original data
13 pnp1-1 3h +P 0.73 >More info 0.53 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
14 Shoot dark control 7h 0.61 >More info 0.60 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
15 Shoot submergence 24h 0.63 >More info 0.58 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 Osmotic Stress 24 h (shoot) 0.58 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
17 Dark 1day ivd 0.63 >More info 0.52 >More info 0h ivd Original data
18 Dark 1day hml 0.60 >More info 0.54 >More info 0h hml Original data
19 Dark 3day wt 0.66 >More info 0.48 >More info 0h wt Original data
20 WT Seedling BL -0.58 >More info -0.56 >More info WT Seedling Dark Original data GEO bulk
21 Nicotinamide-69hr 0.60 >More info 0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
22 spch 0.60 >More info 0.54 >More info Col-0 WT whole seedling Original data GEO bulk
23 4d red light grown hmr-5 seedlings 0.60 >More info 0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
24 ADD3 -0.57 >More info -0.57 >More info WT aerial part Original data GEO bulk
25 6h volatiles Sm. R3089 0.46 >More info 0.67 >More info 6h untreated whole seedling Original data GEO bulk
26 Col BTH 0.46 >More info 0.67 >More info Col rosettes Original data GEO bulk
27 Dark 2day wt 0.64 >More info 0.49 >More info 0h wt Original data
28 Dark 2day hml 0.63 >More info 0.49 >More info 0h hml Original data
29 Col0-PsmES4326-24hpi 0.51 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
30 apum23 0.51 >More info 0.60 >More info WT (Col-3) aerial parts Original data GEO bulk
31 Dark 1day wt 0.63 >More info 0.48 >More info 0h wt Original data
32 Col-0 C2H4 24h 0.63 >More info 0.48 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
33 Nicotinamide-93hr 0.64 >More info 0.46 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
34 Dark 3day hml 0.62 >More info 0.48 >More info 0h hml Original data
35 gun1-1 +lincomycin -0.52 >More info -0.58 >More info Col-0 +lincomycin Original data GEO bulk
36 aerial organ callus inducing medium 96 h 0.58 >More info 0.52 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
37 Col-0 under 4 days salt 0.66 >More info 0.42 >More info Col-0 under control 4 days salt treatment rosette Original data
38 ppi2 0.68 >More info 0.40 >More info WT whole plant Original data GEO bulk
39 phr1 phl1 Root-Pi 0.57 >More info 0.51 >More info WT Shoot+Pi roots Original data GEO bulk
40 Dark 4 h pls RedLight 1min -0.42 >More info -0.66 >More info Dark 4 h Original data Light treatments
41 Sulfometuron EC50 0.56 >More info 0.51 >More info Carrier Original data GEO bulk
42 WT hypoxia 0.58 >More info 0.48 >More info WT normoxia whole rosette Original data
43 pap1-D/tt4 0.54 >More info 0.52 >More info Col-0 aerial part Original data
44 aerial organ callus inducing medium 48 h 0.60 >More info 0.46 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
45 T6 leaf-drought 0.46 >More info 0.60 >More info T6 leaf-well watered Original data GEO bulk
46 tt4 0.55 >More info 0.50 >More info Col-0 aerial part Original data
47 WT light -0.55 >More info -0.50 >More info WT dark Original data GEO bulk
48 low CO2 + dark 0.56 >More info 0.49 >More info normal CO2 + light Original data GEO bulk
49 Nicotinamide-89hr 0.59 >More info 0.45 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
50 seedling 1.5h after HZE WT 0.54 >More info 0.49 >More info seedling day 1 unirradiated WT 1.5h Original data
51 Seedling KUA1-IOX est 0.47 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
52 detached inflorescences 24h 0.51 >More info 0.51 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
53 Col-0 low oxygen 0.56 >More info 0.46 >More info Col-0 Original data GEO bulk
54 Laer pretreat GA Flg22 1h 0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
55 Pseudomonas 0.42 >More info 0.58 >More info Control pseudomonas treated whole seedling Original data GEO bulk
56 shoots bhlh100/101 0uM Fe 0.56 >More info 0.43 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
57 Nicotinamide-53hr 0.56 >More info 0.43 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
58 sta1 0.41 >More info 0.58 >More info WT Original data GEO bulk
59 WT Red light 18h -0.56 >More info -0.42 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
60 fil-8 yab3-2 yab5-1 0.50 >More info 0.48 >More info wt Apices Original data GEO bulk
61 MYB12OX/tt4 0.50 >More info 0.48 >More info Col-0 aerial part Original data
62 Nicotinamide-77hr 0.56 >More info 0.41 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
63 Dark 6h ivd 0.53 >More info 0.44 >More info 0h ivd Original data
64 Nicotinamide-65hr 0.57 >More info 0.40 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
65 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
66 mkk1/mkk2 24h BTH rep 0.57 >More info 0.38 >More info Col-0 24h BTH rep Original data GEO bulk
67 Dark 6h wt 0.53 >More info 0.42 >More info 0h wt Original data
68 ABA control 0.45 >More info 0.50 >More info No ABA control Original data GEO bulk
69 RPL18 TuMV inoculated total RNA 0.56 >More info 0.38 >More info mock inoculated total RNA PO Original data GEO bulk
70 sfr6 control -0.52 >More info -0.42 >More info WT control All aerial tissue Original data GEO bulk
71 gul2-1 mutant 0.51 >More info 0.43 >More info WT 7 day-old whole seedlings Original data
72 Nicotinamide-73hr 0.60 >More info 0.34 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
73 pil5 red light 0.34 >More info 0.60 >More info Col-0 red light Original data GEO bulk
74 exo70A1 0.54 >More info 0.39 >More info Col-0 whole plant Original data GEO bulk
75 aox1a(line) MLD stressed 0.54 >More info 0.39 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
76 petiole in D 0.55 >More info 0.38 >More info petiole in WL petioles Original data GEO bulk
77 Dark 3day ivd 0.62 >More info 0.31 >More info 0h ivd Original data
78 tmm1-inflorescence-tips -0.23 >More info -0.70 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
79 1 h Light Total RNA -0.43 >More info -0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
80 rosettes WT drought 0.56 >More info 0.36 >More info rosettes WT watered Original data GEO bulk
81 pip3 At2g19270 TDNA 9 0.33 >More info 0.59 >More info Col-0 whole plant Original data GEO bulk
82 irradiated leaf (cmt 1d) 0.31 >More info 0.61 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
83 Imidazolinone EC50 0.41 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
84 SLWF infested 0.55 >More info 0.36 >More info SLWF uninfested rosette tissue Original data GEO bulk
85 dor drought 0.40 >More info 0.51 >More info WT drought Original data GEO bulk
86 red illumination +lincomycin 0.38 >More info 0.53 >More info red illumination -lincomycin Original data GEO bulk
87 Nicotinamide-49hr 0.59 >More info 0.32 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
88 clf-28 swn-7 0.56 >More info 0.34 >More info Col whole plant Original data GEO bulk
89 aerial organ callus inducing medium 12 h 0.58 >More info 0.32 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
90 aerial organ callus inducing medium 24h 0.58 >More info 0.32 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
91 CabpBVR2 0.37 >More info 0.52 >More info WT Original data GEO bulk
92 Nicotinamide-81hr 0.58 >More info 0.31 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
93 ahg1-1 0.38 >More info 0.50 >More info ABA control Original data GEO bulk
94 Laer treat paclobutrazol (PAC) 0.58 >More info 0.30 >More info Laer Control leaf discs Original data GEO bulk
95 Nicotinamide-85hr 0.53 >More info 0.33 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
96 pif4pif5 mut 1h FR -0.55 >More info -0.31 >More info WT 1h FR Original data GEO bulk
97 Cor 10h 0.53 >More info 0.33 >More info Mock 10h Cor Original data GEO bulk
98 SA 4mM 0.56 >More info 0.30 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
99 prors1-2 leaves 0.35 >More info 0.51 >More info Col-0 leaves leaves Original data
100 seedling 24h after HZE WT 0.28 >More info 0.58 >More info seedling day 2 unirradiated WT 24h Original data
101 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.32 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
102 rosette leaves fdh 0.33 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
103 cdpk6-yfp 0.29 >More info 0.56 >More info Kan seedlings Original data GEO bulk
104 UV 0.50 >More info 0.35 >More info WT aerial region Original data GEO bulk
105 E.coli TUV86 2 fliC 7h 0.51 >More info 0.33 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
106 ceh1 mutant 0.52 >More info 0.32 >More info Parent line Original data
107 rosette leaves bdg 0.30 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
108 Heat shock optimum 0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
109 petiole in FRD 0.57 >More info 0.26 >More info petiole in WL petioles Original data GEO bulk
110 msh1 albino 0.54 >More info 0.28 >More info WT aerial part Original data GEO bulk
111 leaf blade in FRD 0.50 >More info 0.32 >More info leaf blade in WL leaf blades Original data GEO bulk
112 UV Stress 24 h (shoot) 0.57 >More info 0.25 >More info Stress mock 24 h (shoot) Original data Stress treatments
113 CMV-WT 0.51 >More info 0.30 >More info Mock-At Aerial tissues Original data GEO bulk
114 mdh 0.50 >More info 0.29 >More info Col Original data GEO bulk
115 atm3 -0.25 >More info -0.54 >More info Col0 whole plant Original data GEO bulk
116 seedling 3h after Gamma WT 0.18 >More info 0.61 >More info seedling day 1 unirradiated WT 3h Original data
117 Mock pft1 leaf -0.25 >More info -0.53 >More info Mock Col-0 leaf water leaf Original data GEO bulk
118 35S::PI ap3-3 35S::AP-GR +DEX 0.23 >More info 0.55 >More info 0hr DEX Original data GEO bulk
119 mbd4 mutant thaliana 10-day-old seedling 0.51 >More info 0.26 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
120 fri-flc 0.51 >More info 0.26 >More info WT Original data GEO bulk
121 Nicotinamide-61hr 0.51 >More info 0.25 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
122 light -0.58 >More info -0.18 >More info dark light seedling Original data GEO bulk
123 atmospheric CO2 low Mg shoot 0.56 >More info 0.20 >More info atmospheric CO2 normal Mg shoot Shoot Original data
124 oas-a1.1 root -0.23 >More info -0.53 >More info WT-Untreated Root Original data GEO bulk
125 ABA SA 24h 0.14 >More info 0.62 >More info EtOH 24h 24hr Original data GEO bulk
126 2hr continuous KNO3 ECR cell 0.20 >More info 0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
127 aphid infested 0.18 >More info 0.55 >More info control aphid infested Leaves Original data GEO bulk
128 aphid infested 0.18 >More info 0.55 >More info CTR Original data GEO bulk
129 2hr transitory KNO3 ECR cell 0.18 >More info 0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
130 sfr2 control -0.54 >More info -0.18 >More info WT control All aerial tissue Original data GEO bulk
131 root epidermis and lateral root cap pH4.6 0.20 >More info 0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
132 Callus 0.22 >More info 0.50 >More info Control for tissue data callus Original data GEO bulk
133 seedlings +5AC 0.56 >More info 0.15 >More info control seedlings 10-day old whole seedling Original data GEO bulk
134 ara1/2mut 0.17 >More info 0.54 >More info Col-3 Original data GEO bulk
135 seedlings-week-old RECA1-overexpressing
transgenic		 0.51 >More info 0.20 >More info seedlings-week-old Col-0 seedlings Original data
136 seed during stratification 12 h S 0.21 >More info 0.50 >More info Control for tissue data seed Original data GEO bulk
137 ice1 control 0.53 >More info 0.17 >More info WT control Original data GEO bulk
138 CLO 4mM 0.55 >More info 0.15 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
139 Flagellin 4 h (leaf) 0.53 >More info 0.17 >More info Mock 4 h (leaf) Original data Elicitor treatments
140 2hr continuous KCl and MSX control PeR cell -0.18 >More info -0.52 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
141 intact root control 0.12 >More info 0.57 >More info Control for tissue data mock whole root Original data GEO bulk
142 SCR-GR Time 1H Dex 0.13 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
143 msh1 recA3 untreated 0.17 >More info 0.51 >More info WT untreated above-ground parts Original data GEO bulk
144 scrm-D 0.58 >More info 0.10 >More info Col-0 WT whole seedling Original data GEO bulk
145 pnp1-1 1wk +P 0.50 >More info 0.17 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
146 IMI 4mM 0.59 >More info 0.08 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
147 PRR5-VP 12h light on -0.50 >More info -0.16 >More info WT 12h light on whole plant Original data GEO bulk
148 Red/FR Light45min 0.11 >More info 0.55 >More info FarRed Light 45min Original data Light treatments
149 GA4 3 h (ga1 seed) 0.50 >More info 0.15 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
150 Dark 2day ivd 0.66 >More info -0.01 >More info 0h ivd Original data
151 CMP 24hr 0.50 >More info 0.15 >More info Acetone 24hr root Original data GEO bulk
152 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.55 >More info 0.08 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
153 wrky33 Bc inoculation 14h 0.54 >More info 0.08 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
154 Shoot submergence 7h 0.62 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
155 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
156 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.50 >More info 0.11 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
157 35S:RPS4 eds1-2 24h -0.53 >More info -0.07 >More info 35S:RPS4 24h leaves Original data
158 CT101 ozone 0.52 >More info 0.08 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
159 eto1-4 0.52 >More info 0.08 >More info Col-0 whole seedling Original data GEO bulk
160 root hair 0.10 >More info 0.50 >More info Control for tissue data root hairs Original data GEO bulk
161 IAA7mII over-expressor IAA Treated -0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
162 WT Bc inoculation 14h 0.51 >More info 0.06 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
163 seedling 3h after HZE WT 0.55 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
164 35S:miR396 0.07 >More info 0.50 >More info WT 0 days-old seedlings. Original data GEO bulk
165 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
166 ABA JA 24h 0.02 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
167 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
168 Col-0 ozone 0.50 >More info 0.05 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
169 Fei-0-30min IAA -0.01 >More info -0.54 >More info Fei-0-0h IAA whole plant Original data GEO bulk
170 Whole root - S 3H -0.02 >More info -0.53 >More info Whole root - S 0H Original data GEO bulk
171 high-R:FR bud uppermost -0.04 >More info -0.51 >More info low-R:FR bud uppermost high R rosette axillary bud n Original data GEO bulk
172 bri1-116 -0.19 >More info 0.73 >More info Col seedling Original data GEO bulk
173 FarRed Light 45min 0.05 >More info -0.58 >More info White Light 45min Original data Light treatments
174 Fe starvation 3 h -0.09 >More info 0.61 >More info Control Original data GEO bulk
175 whole roots -Fe 3 hour -0.09 >More info 0.61 >More info whole roots standard Original data GEO bulk
176 P.p 2.5hai 0.06 >More info -0.57 >More info At-Control roots Original data GEO bulk
177 HairpinZ 4 h (leaf) 0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
178 WT Atum 1h -0.11 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
179 opr3 OPDA 0.5 h -0.02 >More info 0.51 >More info opr3 0 h Original data GEO bulk
180 ckh2 CK0 0.03 >More info -0.50 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
181 Shoot apex inflorescence (after bolting) -0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
182 Dry pre-dawn 0.06 >More info -0.51 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
183 Genotoxic Stress 3 h (shoot) -0.21 >More info 0.56 >More info Stress mock 3 h (shoot) Original data Stress treatments
184 agb1 -ABA LF 0.24 >More info -0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk