4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seedling 24h after HZE WT
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List of experiments correlated with "seedling 24h after HZE WT"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedling 24h after HZE WT		 Correlation to
seedling 24h after HZE WT		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedling 24h after HZE WT 1.00 >More info 1.00 >More info seedling day 2 unirradiated WT 24h Original data
2 seedling 3h after Gamma WT 0.84 >More info 0.88 >More info seedling day 1 unirradiated WT 3h Original data
3 seedling 24h after HZE atm-1 0.85 >More info 0.81 >More info seedling day 2 unirradiated atm-1 24h Original data
4 seedling 12h after HZE WT 0.89 >More info 0.75 >More info seedling day 1 unirradiated WT 12h Original data
5 seedling 6h after HZE WT 0.88 >More info 0.74 >More info seedling day 1 unirradiated WT 6h Original data
6 seedling 6h after Gamma WT 0.83 >More info 0.77 >More info seedling day 1 unirradiated WT 6h Original data
7 irradiated leaf (WT 1d) 0.81 >More info 0.69 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
8 seedling 1.5h after Gamma WT 0.79 >More info 0.71 >More info seedling day 1 unirradiated WT 1.5h Original data
9 Genotoxic Stress 3 h (shoot) 0.59 >More info 0.85 >More info Stress mock 3 h (shoot) Original data Stress treatments
10 atm3 -0.68 >More info -0.72 >More info Col0 whole plant Original data GEO bulk
11 seedling 6h after Gamma atm-1 0.79 >More info 0.59 >More info seedling day 1 unirradiated atm-1 6h Original data
12 irradiated leaf (cmt 1d) 0.75 >More info 0.58 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
13 BLM+INA 0.75 >More info 0.54 >More info CK BLM and INA seedling Original data
14 seedling 12h after Gamma WT 0.79 >More info 0.48 >More info seedling day 1 unirradiated WT 12h Original data
15 pil5 red light 0.75 >More info 0.49 >More info Col-0 red light Original data GEO bulk
16 BLM 0.68 >More info 0.54 >More info CK BLM seedling Original data
17 seedling 12h after Gamma atm-1 0.76 >More info 0.46 >More info seedling day 1 unirradiated atm-1 12h Original data
18 seedling 12h after HZE atm-1 0.75 >More info 0.45 >More info seedling day 1 unirradiated atm-1 12h Original data
19 sicy-192 cotyledons 0.71 >More info 0.45 >More info WT cotyledons cotyledons Original data
20 35S::PI ap3-3 35S::AP-GR +DEX 0.44 >More info 0.70 >More info 0hr DEX Original data GEO bulk
21 seedling 1.5h after HZE WT 0.77 >More info 0.35 >More info seedling day 1 unirradiated WT 1.5h Original data
22 seedling 24h after Gamma WT 0.77 >More info 0.34 >More info seedling day 2 unirradiated WT 24h Original data
23 seedling 6h after HZE atm-1 0.63 >More info 0.48 >More info seedling day 1 unirradiated atm-1 6h Original data
24 apum23 0.75 >More info 0.35 >More info WT (Col-3) aerial parts Original data GEO bulk
25 Sulfometuron EC50 0.57 >More info 0.51 >More info Carrier Original data GEO bulk
26 rosette Dark Wounded 0.32 >More info 0.75 >More info rosette Dark Control Original data GEO bulk
27 Genotoxic Stress 3 h (root) 0.70 >More info 0.36 >More info Stress mock 3 h (root) Original data Stress treatments
28 NJ15 0.34 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
29 Primisulfuron EC50 0.61 >More info 0.43 >More info Carrier (primisulfuron) Original data GEO bulk
30 Triazolopyrimidine EC50 0.61 >More info 0.43 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
31 esd7-1 0.61 >More info 0.42 >More info Ler seedlings Original data GEO bulk
32 csn3-1 light 0.70 >More info 0.32 >More info WT light Original data GEO bulk
33 csn5 (csn5a-2 csn5b) light 0.68 >More info 0.34 >More info WT light Original data GEO bulk
34 Leaf wounded 0.27 >More info 0.75 >More info Leaf control vegetative leaf Original data GEO bulk
35 sta1 0.61 >More info 0.40 >More info WT Original data GEO bulk
36 UV 0.69 >More info 0.32 >More info WT aerial region Original data GEO bulk
37 gis5 seedlings 0.66 >More info 0.34 >More info WT seedlings Whole seedlings (leaves + roots) Original data
38 Col0-PsmES4326-24hpi 0.37 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
39 35S:VND7-VP16-GR+CHX 0.36 >More info 0.62 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
40 35S:RPS4 eds1-2 2h -0.32 >More info -0.66 >More info 35S:RPS4 2h leaves Original data
41 WT seedlings MV 0.51 >More info 0.46 >More info WT seedlings control Seedlings Original data GEO bulk
42 irradiated leaf (cmt 5d) 0.59 >More info 0.38 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
43 albino Ds13-2198-1 -0.57 >More info -0.40 >More info control Original data GEO bulk
44 RPL18 TuMV inoculated total RNA 0.60 >More info 0.37 >More info mock inoculated total RNA PO Original data GEO bulk
45 ppi2 0.51 >More info 0.45 >More info WT whole plant Original data GEO bulk
46 sicy-192 gun1-101 cotyledons 0.60 >More info 0.36 >More info WT cotyledons cotyledons Original data
47 rosette Light Wounded 0.29 >More info 0.67 >More info rosette Light Control Original data GEO bulk
48 UV Stress 24 h (shoot) 0.62 >More info 0.33 >More info Stress mock 24 h (shoot) Original data Stress treatments
49 cat2-2; 8h switch to ambient CO2 concentrations; 0.44 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
50 FLIGHT TAGESB plate6 ROOTS 0.34 >More info 0.61 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
51 Mutant cry1 (High Light) -0.55 >More info -0.39 >More info Col-0 (High Light) Original data GEO bulk
52 cry1 high light -0.55 >More info -0.39 >More info Col-O high light Original data GEO bulk
53 Imidazolinone EC50 0.57 >More info 0.37 >More info Carrier (Imidazolinone) Original data GEO bulk
54 msh1 albino 0.53 >More info 0.40 >More info WT aerial part Original data GEO bulk
55 LTN008-2 aza-dc 0.65 >More info 0.28 >More info LTN012-2 Mock Original data
56 Rose Bengal 0.5 uM 0.36 >More info 0.56 >More info Control RB and PER Rose Bengal Original data
57 WT 3h -P 0.23 >More info 0.68 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
58 WT+chitooctaose 0.27 >More info 0.64 >More info WT+water chitooctaose seedlings Original data GEO bulk
59 sni1 0.57 >More info 0.34 >More info WT Original data GEO bulk
60 flu 0.33 >More info 0.56 >More info WT Col Original data GEO bulk
61 Leaf GLU1-KO 0.54 >More info 0.35 >More info Leaf Col(0) rosette leaves Original data GEO bulk
62 GR:KAN1 DEX Shade 0.52 >More info 0.36 >More info GR:KAN1 Mock Shade seedlings Original data
63 seedlings +5AC 0.71 >More info 0.17 >More info control seedlings 10-day old whole seedling Original data GEO bulk
64 flu over-tAPX 0.34 >More info 0.53 >More info WT Col Original data GEO bulk
65 WT-Dry 0.16 >More info 0.71 >More info WT-CK dehydration treatment 1h Original data
66 Selenate (root) 0.32 >More info 0.54 >More info Ws (root) Original data GEO bulk
67 Root Selenate 0.32 >More info 0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
68 WT mitomycin C 0.65 >More info 0.21 >More info WT mock shoot apical meristem Original data
69 seedling 1.5h after Gamma atm-1 0.63 >More info 0.23 >More info seedling day 1 unirradiated atm-1 1.5h Original data
70 24h light (+Lincomycin) 0.58 >More info 0.28 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
71 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
72 WT 3H Cold 0.09 >More info 0.77 >More info WT control Original data GEO bulk
73 WT (Ler) TSA 0.51 >More info 0.34 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
74 WT chitooctaose 0.33 >More info 0.52 >More info WT water Original data GEO bulk
75 Col in Pi deficiency medium 0.16 >More info 0.69 >More info Col in control medium root Original data GEO bulk
76 chito-octamer 0.25 >More info 0.60 >More info Col Mock Original data GEO bulk
77 ice1 control 0.50 >More info 0.34 >More info WT control Original data GEO bulk
78 rpl24 total 0.52 >More info 0.32 >More info WT total seedling shoot/aerial seedling Original data
79 seedling 24h after Gamma atm-1 0.64 >More info 0.20 >More info seedling day 2 unirradiated atm-1 24h Original data
80 msh1 recA3 untreated 0.55 >More info 0.29 >More info WT untreated above-ground parts Original data GEO bulk
81 Col-0 norflurazon 0.59 >More info 0.25 >More info Col-0 control Original data GEO bulk
82 WT 6H Cold 0.27 >More info 0.57 >More info WT control Original data GEO bulk
83 4C 2h(SOIL) 0.10 >More info 0.74 >More info 4C 0h(SOIL) Original data GEO bulk
84 CDB1-Knockout -0.11 >More info -0.73 >More info WT Original data GEO bulk
85 pnp1-1 3h +P 0.53 >More info 0.30 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
86 nas4x leaves - Fe -0.56 >More info -0.27 >More info WT leaves - Fe Leaves Original data GEO bulk
87 seedling 3h after HZE WT 0.80 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
88 Protoplast Induced 0.09 >More info 0.73 >More info Uninduced Original data GEO bulk
89 cop1 Seedling BL 0.50 >More info 0.31 >More info WT Seedling BL Original data GEO bulk
90 abi1 hypocotyl 0.15 >More info 0.66 >More info Ler hypocotyl hypocotyl Original data GEO bulk
91 ex2 flu dark 8hours/30 minute light 0.12 >More info 0.68 >More info col dark 8hours/30 minute light Original data GEO bulk
92 GA 0.20 >More info 0.60 >More info none GA Rosette Original data GEO bulk
93 Col-0 +lincomycin 0.54 >More info 0.25 >More info Col-0 -lincomycin Original data GEO bulk
94 E2Fa-Dpa 0.54 >More info 0.25 >More info WT Original data GEO bulk
95 OsSAP11 expressing -0.21 >More info -0.58 >More info WT seedlings Original data GEO bulk
96 eds16 whole leaf 6hpi -0.24 >More info -0.54 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
97 12m.KCl 0.19 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
98 whole roots 140 mM NaCl 30 minutes 0.23 >More info 0.55 >More info whole roots standard Original data GEO bulk
99 chito-tetramer 0.24 >More info 0.53 >More info Col Mock Original data GEO bulk
100 Kas -Fe 48h Shoots 0.53 >More info 0.23 >More info Kas +Fe 24h Shoots Original data GEO bulk
101 FarRed Light 45min -0.03 >More info -0.73 >More info White Light 45min Original data Light treatments
102 myb3 myb3r4d 0.13 >More info 0.63 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
103 csn4-1 dark 0.57 >More info 0.18 >More info WT light Original data GEO bulk
104 flu dark 8hours/30 minute light 0.09 >More info 0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
105 Roots Cd -0.22 >More info -0.53 >More info Roots control Cd Root Original data GEO bulk
106 WT+H2O2 0.23 >More info 0.52 >More info WT H2O2 Original data GEO bulk
107 Col BTH 0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
108 WT leaves - Fe 0.58 >More info 0.16 >More info WT leaves + Fe Leaves Original data GEO bulk
109 aba1 hypocotyl 0.16 >More info 0.58 >More info Ler hypocotyl hypocotyl Original data GEO bulk
110 Leafminer damaged seedlings 0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
111 shoots bhlh100/101 0uM Fe 0.51 >More info 0.22 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
112 COL-0-Fe--shoot 0.51 >More info 0.22 >More info COL-0-Ctrl--shoot shoot Original data
113 miR mutant (higher order mutant) 0.57 >More info 0.15 >More info col control (higher order mutant) Original data GEO bulk
114 seed germinating in countinuous light 24h SL 0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
115 cdpk6-yfp 0.60 >More info 0.11 >More info Kan seedlings Original data GEO bulk
116 irradiated leaf (WT 5d) 0.53 >More info 0.17 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
117 opr3 OPDA 0.5 h 0.04 >More info 0.66 >More info opr3 0 h Original data GEO bulk
118 Col 8h 0.14 >More info 0.56 >More info Col CA Leaves Original data
119 whole roots -Fe 72 hour 0.50 >More info 0.20 >More info whole roots standard Original data GEO bulk
120 Fe starvation 72 h 0.50 >More info 0.20 >More info Control Original data GEO bulk
121 Prohexadione 3 h 0.07 >More info 0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
122 Whole root - low pH 6H 0.20 >More info 0.50 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
123 pil5 dark 0.58 >More info 0.11 >More info Col-0 dark Original data GEO bulk
124 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
125 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
126 ABA 0.5 h 0.16 >More info 0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
127 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
128 Heat shock optimum 0.01 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
129 max4 hypocotyl 0.15 >More info 0.51 >More info wt hypocotyl hypocotyl Original data GEO bulk
130 HARAP aerobic -0.09 >More info -0.55 >More info WT aerobic aerobic Original data GEO bulk
131 Leaf systemic 0.13 >More info 0.50 >More info Leaf control vegetative leaf Original data GEO bulk
132 csn4-1 mutant 0.54 >More info 0.08 >More info WT dark Original data GEO bulk
133 csn3-1 dark 0.53 >More info 0.09 >More info WT dark Original data GEO bulk
134 ein5-1 ski2-3 0.11 >More info 0.50 >More info Col-0 aerial tissue Original data
135 opr3 JA 0.5 h -0.12 >More info 0.73 >More info opr3 0 h Original data GEO bulk
136 WT drought 0.09 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
137 Col-0 2HS 0.11 >More info 0.50 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
138 1h +Pi 0.01 >More info -0.61 >More info 1h -Pi root Original data GEO bulk
139 Norflurazon 0.61 >More info -0.02 >More info Col-0 Original data GEO bulk
140 Norflurazon 0.61 >More info -0.02 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
141 rsa3-1 Na 24h 0.03 >More info 0.55 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
142 SCR-GR Time 1H Dex 0.06 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
143 Rsch 8h 0.05 >More info 0.50 >More info Rsch CA Leaves Original data
144 Elevated CO2 expanding leaf 0.03 >More info 0.52 >More info Ambient CO2 expanding leaf expanding leaf Original data
145 MPK6 ox Shoot Hypoxia 0.04 >More info 0.50 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
146 4C 1h -0.12 >More info 0.66 >More info 4C 0h Original data GEO bulk
147 dorn1-1 Root 100 mM ATP 30 min 0.00 >More info -0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
148 MPK6 ox Root Hypoxia 0.03 >More info 0.50 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
149 control leaf (cmt 5d) -0.54 >More info 0.03 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
150 Red/FR Light45min -0.03 >More info 0.54 >More info FarRed Light 45min Original data Light treatments
151 sav1-1 shade -0.06 >More info 0.56 >More info Col-0 shade seedlings Original data GEO bulk
152 ex1 flu dark 8hours/30 minute light -0.06 >More info 0.54 >More info col dark 8hours/30 minute light Original data GEO bulk
153 ACN1-2 -0.05 >More info 0.53 >More info col-7 Original data GEO bulk
154 bHLH122 ox 0.08 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
155 coi1 0.07 >More info -0.54 >More info Col-0 Leaves Original data GEO bulk
156 cngc19 -0.03 >More info 0.50 >More info Col-0 root Original data GEO bulk
157 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
158 IAA7mII over-expressor IAA Treated -0.24 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
159 Kas-1 -Fe 24h 0.09 >More info -0.51 >More info Kas-1 +Fe 24h roots Original data GEO bulk
160 Kas -Fe 24h Roots 0.09 >More info -0.51 >More info Kas +Fe 24h Roots Original data GEO bulk
161 ABA SA 24h -0.21 >More info 0.61 >More info EtOH 24h 24hr Original data GEO bulk
162 pab polysome 0.15 >More info -0.50 >More info WT polysome seedling shoot/aerial seedling Original data
163 ACN1-2 Sucrose -0.27 >More info 0.51 >More info Col-7 Sucrose Original data GEO bulk