4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Dark 40min pls UV-AB 5min
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List of experiments correlated with "Dark 40min pls UV-AB 5min "  Help Download transcriptome of top 30
Score Experiment Correlation from
Dark 40min pls UV-AB 5min 		Correlation to
Dark 40min pls UV-AB 5min 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Dark 40min pls UV-AB 5min 1.00 >More info 1.00 >More info Dark 45 min Original data Light treatments
2 Dark 40 min pls UV-A 5 min 0.90 >More info 0.94 >More info Dark 45 min Original data Light treatments
3 Dark 44min pls RedLigh 1min 0.83 >More info 0.93 >More info Dark 45 min Original data Light treatments
4 WT Red light 1h 0.85 >More info 0.88 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
5 Light 0.5h polysome-bound 0.85 >More info 0.79 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
6 Light 0.5h steady-state 0.81 >More info 0.83 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
7 2d dark-grown WT(Col-0)/1 hr red light 0.77 >More info 0.83 >More info 2d dark-grown WT seedling Original data GEO bulk
8 Red/FR Light 4 h -0.72 >More info -0.75 >More info FarRed Light 4 h Original data Light treatments
9 FarRed Light 4 h 0.71 >More info 0.73 >More info White Light 4 h Original data Light treatments
10 Light 4h polysome-bound 0.76 >More info 0.67 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
11 Light 4h steady-state 0.75 >More info 0.67 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
12 Blue Light 4 h 0.67 >More info 0.75 >More info White Light 4 h Original data Light treatments
13 Dark 4 h pls UV-AB 5min 0.69 >More info 0.69 >More info Dark 4 h Original data Light treatments
14 FarRed Light 45min -0.57 >More info -0.79 >More info White Light 45min Original data Light treatments
15 WT-Dry 0.60 >More info 0.64 >More info WT-CK dehydration treatment 1h Original data
16 NJ15 0.39 >More info 0.85 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
17 Night Time Treatment 0.58 >More info 0.64 >More info Night Time Control 1hr white light pulse aerial rosette Original data
18 60m light 0.51 >More info 0.68 >More info before light whole seedlings Original data GEO bulk
19 pXVE:HA-EDM2-a untreated -0.50 >More info -0.68 >More info Col-0 untreated seedlings Original data GEO bulk
20 inhibitor A Treated 0.56 >More info 0.60 >More info Negative Control Original data GEO bulk
21 24h volatiles Sm. R3089 -0.56 >More info -0.59 >More info 24h untreated whole seedling Original data GEO bulk
22 WT Red light 18h 0.62 >More info 0.51 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
23 Day Time Treatment 0.58 >More info 0.55 >More info Day Time Control 1hr white light pulse aerial rosette Original data
24 seedling 24h after Gamma WT 0.63 >More info 0.50 >More info seedling day 2 unirradiated WT 24h Original data
25 Red Light 4 h -0.52 >More info -0.60 >More info White Light 4 h Original data Light treatments
26 Col-0 WT HL 3h 0.61 >More info 0.49 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
27 Whole root - S 3H 0.53 >More info 0.57 >More info Whole root - S 0H Original data GEO bulk
28 plant (tga2-5-6) 4h phytoprostane A1 0.45 >More info 0.65 >More info plant (tga2-5-6) 4h control Original data GEO bulk
29 seedling 24h after Gamma atm-1 0.60 >More info 0.49 >More info seedling day 2 unirradiated atm-1 24h Original data
30 30m light 0.48 >More info 0.60 >More info before light whole seedlings Original data GEO bulk
31 Shoot -Cs 0.40 >More info 0.67 >More info Control-shoot Original data GEO bulk
32 Dark 4 h pls RedLight 1min 0.41 >More info 0.65 >More info Dark 4 h Original data Light treatments
33 csn4-1 mutant 0.64 >More info 0.40 >More info WT dark Original data GEO bulk
34 shl-2 Pool -0.49 >More info -0.55 >More info Ler Pool seedling Original data GEO bulk
35 oas-a1.1 root 0.38 >More info 0.65 >More info WT-Untreated Root Original data GEO bulk
36 etiolated cop1BBX22-GFPox 0.57 >More info 0.45 >More info etiolated Col-0 whole seedlings Original data GEO bulk
37 IAA/inhibitor A Treated 0.50 >More info 0.52 >More info IAA Treated Original data GEO bulk
38 Heat and anoxia 0.51 >More info 0.51 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
39 9 hr Hypoxia 1 hr recovery Total RNA 0.50 >More info 0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
40 WT 90-105 min Xanthomonas 0.56 >More info 0.45 >More info WT T0 Original data GEO bulk
41 9 hr Hypoxia 1 hr recovery IP RNA 0.53 >More info 0.48 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
42 TaFLS overexpression line (OE2) -0.53 >More info -0.47 >More info Col-0 Rosette leaves Original data
43 Heat 0.53 >More info 0.47 >More info Control 90 minutes at 38°C. Original data GEO bulk
44 Phytoprostane A1 4 h 0.44 >More info 0.56 >More info Col-0 Original data GEO bulk
45 mkk2 control rep -0.43 >More info -0.57 >More info Col-0 Time 0 rep Original data GEO bulk
46 atmyc2 cop1 Seedling BL 0.49 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
47 Dark 4 h pls UV-A 5 min 0.41 >More info 0.58 >More info Dark 4 h Original data Light treatments
48 WT(Ler) Rc50 0.50 >More info 0.48 >More info WT(Ler) Dark Original data GEO bulk
49 Transgenic LEC2GR Seedling 1h Dex 0.43 >More info 0.55 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
50 cat2-2; 8h switch to ambient CO2 concentrations; 0.41 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
51 Col-0 DEX Shade -0.55 >More info -0.42 >More info Col-0 DEX WL seedlings Original data
52 wnk8-1 untreated -0.37 >More info -0.60 >More info Col-0 untreated seedlings Original data GEO bulk
53 csn5 (csn5a-2 csn5b) dark 0.59 >More info 0.37 >More info WT dark Original data GEO bulk
54 Shoot dark control 7h -0.53 >More info -0.43 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
55 6-trichlorophenoxyacetic acid 3 h 0.32 >More info 0.64 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
56 inhibitor B Treated 0.37 >More info 0.59 >More info Negative Control Original data GEO bulk
57 toc1-1-85hr 0.38 >More info 0.58 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
58 csn3-1 dark 0.60 >More info 0.35 >More info WT dark Original data GEO bulk
59 WT hypoxia -0.51 >More info -0.43 >More info WT normoxia whole rosette Original data
60 wnk8-2 untreated -0.43 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
61 lht1 untreated 0.54 >More info 0.38 >More info WT untreated untreated leaf Original data GEO bulk
62 erf104-ko H2O 4h 0.55 >More info 0.37 >More info Col-0 H2O 4h Original data GEO bulk
63 Cor 24h 0.51 >More info 0.40 >More info Mock 24h Cor Original data GEO bulk
64 35S::ERF104 H2O 4h 0.52 >More info 0.38 >More info Col-0 H2O 4h Original data GEO bulk
65 UV 0.54 >More info 0.36 >More info WT aerial region Original data GEO bulk
66 csn5 (csn5a-2 csn5b) light 0.58 >More info 0.32 >More info WT light Original data GEO bulk
67 WT 6H Cold 0.34 >More info 0.55 >More info WT control Original data GEO bulk
68 Shoot dark control 24h -0.52 >More info -0.37 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
69 csn3-1 light 0.55 >More info 0.33 >More info WT light Original data GEO bulk
70 plant (Col-0) 4h phytoprostane A1 0.34 >More info 0.54 >More info plant (tga2-5-6) 4h control Original data GEO bulk
71 WT seedlings MV 0.38 >More info 0.50 >More info WT seedlings control Seedlings Original data GEO bulk
72 bio4-1 mutant watered00µM biotin leaves -0.34 >More info -0.53 >More info bio4-1 mutant leaves leaves Original data GEO bulk
73 WT 3h -P 0.25 >More info 0.62 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
74 ANOXIA -0.27 >More info -0.60 >More info ANOXIA+SUCROSE Original data GEO bulk
75 WT Seedling BL 0.36 >More info 0.51 >More info WT Seedling Dark Original data GEO bulk
76 IAA/inhibitor B Treated 0.29 >More info 0.58 >More info IAA Treated Original data GEO bulk
77 12h volatiles Sm. R3089 -0.34 >More info -0.52 >More info 12h untreated whole seedling Original data GEO bulk
78 Col0-PsmES4326-24hpi 0.25 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
79 PsJN -0.36 >More info -0.50 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
80 5-Triiodobenzoic acid3 h 0.29 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
81 seed germinating in countinuous light 24h SL 0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
82 dark-hs 0.33 >More info 0.52 >More info dark-control seedling Original data
83 2hr continuous KNO3 ECR cell -0.17 >More info -0.67 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
84 rdr6-15 -0.52 >More info -0.31 >More info Col-0 Original data GEO bulk
85 flu 0.31 >More info 0.52 >More info WT Col Original data GEO bulk
86 essp3/brm5 mutant 0.53 >More info 0.29 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
87 gun1gun5 far-red pretreated -0.32 >More info -0.50 >More info WT far-red pretreated Original data GEO bulk
88 Col-0 DCA 48h 0.50 >More info 0.31 >More info Col-0 MOCK 48h Original data GEO bulk
89 short 12-degree- 0.29 >More info 0.52 >More info control short Original data GEO bulk
90 Col whole leaf 3dpi 0.28 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
91 Red/FR Light45min -0.04 >More info 0.83 >More info FarRed Light 45min Original data Light treatments
92 opr3 OPDA 0.5 h 0.16 >More info 0.62 >More info opr3 0 h Original data GEO bulk
93 CeO2 germinant -0.28 >More info -0.50 >More info Millipore Water germinant CeO2 seedling Original data
94 sicy-192 gun1-101 cotyledons 0.50 >More info 0.27 >More info WT cotyledons cotyledons Original data
95 cop1 Seedling BL+ABA 0.50 >More info 0.26 >More info WT Seedling BL+ABA Original data GEO bulk
96 AgNO3 3 h 0.20 >More info 0.56 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
97 npr1-3 DCA 48h 0.25 >More info 0.51 >More info npr1-3 MOCK 48h Original data GEO bulk
98 tmm1-inflorescence-tips 0.25 >More info 0.50 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
99 bri1-116 0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
100 2hr continuous KNO3 PeR cell -0.17 >More info -0.58 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
101 ABA 1 h 0.16 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
102 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.23 >More info 0.51 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
103 Laer pretreat GA Flg22 1h 0.02 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
104 Shoot apex inflorescence (after bolting) 0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
105 WT+H2O2 0.14 >More info 0.56 >More info WT H2O2 Original data GEO bulk
106 swn-7 -0.50 >More info -0.20 >More info Col whole plant Original data GEO bulk
107 Prohexadione 12 h 0.17 >More info 0.52 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
108 root longitudinal zone-1 -Fe -0.17 >More info -0.50 >More info root longitudinal zone-1 standard Original data GEO bulk
109 anac017-2 water 3h 0.16 >More info 0.51 >More info WT water 3h 3h_water Original data GEO bulk
110 seedling SPL13 -0.51 >More info -0.15 >More info seedling Col-0 Original data GEO bulk
111 Whole root - low pH 1H 0.11 >More info 0.55 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
112 35S::PI ap3-3 35S::AP-GR +DEX 0.03 >More info 0.62 >More info 0hr DEX Original data GEO bulk
113 WT 3H Cold 0.09 >More info 0.55 >More info WT control Original data GEO bulk
114 Col BTH -0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
115 Heat shock optimum -0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
116 siliques AtHb1 control 0.09 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
117 TNT-seedlings 0.04 >More info 0.56 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
118 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
119 IAA7mII over-expressor IAA Treated -0.19 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
120 Ba1 UV 0.06 >More info -0.55 >More info Ba1 mock UV seedling Original data
121 Leafminer damaged seedlings -0.07 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
122 4C 1h -0.05 >More info 0.51 >More info 4C 0h Original data GEO bulk
123 xyl-grown cell culture- 1h 1mM Suc 0.15 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data