4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on det2 light-dark
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List of experiments correlated with "det2 light-dark"  Help Download transcriptome of top 30
Score Experiment Correlation from
det2 light-dark		 Correlation to
det2 light-dark		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 det2 light-dark 1.00 >More info 1.00 >More info det2 light light-dark Original data GEO bulk
2 Shoot dark control 24h 0.69 >More info 0.74 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
3 low CO2 + dark 0.64 >More info 0.77 >More info normal CO2 + light Original data GEO bulk
4 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.71 >More info -0.70 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
5 B.cinerea 18 h infection -0.53 >More info -0.84 >More info Mock 18 h Original data Botrytis cinerea infection
6 Botrytis cinerea 18h -0.53 >More info -0.84 >More info control 18h Original data GEO bulk
7 12h volatiles Sm. R3089 0.53 >More info 0.80 >More info 12h untreated whole seedling Original data GEO bulk
8 Day Time Treatment -0.64 >More info -0.68 >More info Day Time Control 1hr white light pulse aerial rosette Original data
9 04h Col-0 -0.59 >More info -0.72 >More info 00h Col-0 Original data GEO bulk
10 Shoot dark control 7h 0.61 >More info 0.66 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
11 seedling 24h after Gamma WT -0.57 >More info -0.67 >More info seedling day 2 unirradiated WT 24h Original data
12 Pseudomonas 0.48 >More info 0.76 >More info Control pseudomonas treated whole seedling Original data GEO bulk
13 WT (Col) glucose -0.54 >More info -0.68 >More info WT (Col) glucose seedlings Original data GEO bulk
14 Propiconazole 3 h -0.56 >More info -0.66 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
15 sdg2 -0.63 >More info -0.58 >More info wt seedling Original data GEO bulk
16 shl-2 Pool 0.54 >More info 0.66 >More info Ler Pool seedling Original data GEO bulk
17 Whole root - S 3H -0.51 >More info -0.69 >More info Whole root - S 0H Original data GEO bulk
18 WT hypoxia 0.58 >More info 0.61 >More info WT normoxia whole rosette Original data
19 Glyphosate EC50 -0.49 >More info -0.70 >More info Carrier (Glyphosate) Original data GEO bulk
20 seedling 24h after Gamma atm-1 -0.53 >More info -0.65 >More info seedling day 2 unirradiated atm-1 24h Original data
21 Col-0 WT HL 3h -0.57 >More info -0.60 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
22 Shoot submergence 24h 0.55 >More info 0.62 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
23 Col-0 overexpressing At1g54160 control -0.58 >More info -0.59 >More info WT no treatement Original data GEO bulk
24 At1g54160 ox -0.58 >More info -0.59 >More info Col-0 Original data GEO bulk
25 6h volatiles Sm. R3089 0.41 >More info 0.76 >More info 6h untreated whole seedling Original data GEO bulk
26 Night Time Treatment -0.54 >More info -0.62 >More info Night Time Control 1hr white light pulse aerial rosette Original data
27 csn4-1 mutant -0.58 >More info -0.57 >More info WT dark Original data GEO bulk
28 eto1-4 + AVG 0.56 >More info 0.59 >More info eto1-4 whole seedling Original data GEO bulk
29 gun1gun5 far-red pretreated 0.54 >More info 0.61 >More info WT far-red pretreated Original data GEO bulk
30 IRP1-OE-Ctrl--shoot -0.65 >More info -0.50 >More info COL-0-Ctrl--shoot shoot Original data
31 detached inflorescences 24h 0.55 >More info 0.59 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
32 csn5 (csn5a-2 csn5b) dark -0.58 >More info -0.55 >More info WT dark Original data GEO bulk
33 Blue Light 4 h -0.47 >More info -0.66 >More info White Light 4 h Original data Light treatments
34 35S::MBF1c 0.54 >More info 0.58 >More info control Original data GEO bulk
35 R. solani AG2-1 -0.60 >More info -0.52 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
36 csn3-1 dark -0.58 >More info -0.54 >More info WT dark Original data GEO bulk
37 60m light -0.46 >More info -0.64 >More info before light whole seedlings Original data GEO bulk
38 cop1 Seedling BL+ABA -0.56 >More info -0.53 >More info WT Seedling BL+ABA Original data GEO bulk
39 Shoot -Cs -0.34 >More info -0.75 >More info Control-shoot Original data GEO bulk
40 Light 4h steady-state -0.50 >More info -0.59 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
41 WT 1wk -P -0.57 >More info -0.52 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
42 pXVE:HA-EDM2-a untreated 0.48 >More info 0.61 >More info Col-0 untreated seedlings Original data GEO bulk
43 Dark 1day hml 0.62 >More info 0.46 >More info 0h hml Original data
44 Dark 1day wt 0.63 >More info 0.45 >More info 0h wt Original data
45 Dark 4 h pls UV-AB 5min -0.50 >More info -0.58 >More info Dark 4 h Original data Light treatments
46 Dark 1day ivd 0.62 >More info 0.45 >More info 0h ivd Original data
47 apk1 apk2 -0.51 >More info -0.56 >More info Col0-control whole rosette Original data GEO bulk
48 Light 4h polysome-bound -0.49 >More info -0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
49 seedling 1.5h after HZE atm-1 0.46 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
50 24h volatiles Sm. R3089 0.53 >More info 0.52 >More info 24h untreated whole seedling Original data GEO bulk
51 sfr3 control -0.50 >More info -0.55 >More info WT control All aerial tissue Original data GEO bulk
52 12h Col-0 -0.53 >More info -0.51 >More info 00h Col-0 Original data GEO bulk
53 elf3-7-16ºC -0.50 >More info -0.54 >More info WT-16ºC Original data GEO bulk
54 pip3 At2g19270 TDNA 9 0.42 >More info 0.62 >More info Col-0 whole plant Original data GEO bulk
55 MYB12OX/tt4 0.50 >More info 0.53 >More info Col-0 aerial part Original data
56 petiole in FRD 0.49 >More info 0.54 >More info petiole in WL petioles Original data GEO bulk
57 Cocultivation 8 hrs leaf 0.46 >More info 0.57 >More info Mock cocultivation 8 hrs leaf Leaf Original data
58 FarRed Light 45min 0.27 >More info 0.75 >More info White Light 45min Original data Light treatments
59 hypoxic -0.45 >More info -0.57 >More info WT aerobic hypoxia Original data GEO bulk
60 1 h Light Total RNA -0.42 >More info -0.60 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
61 WOX1-1 0.49 >More info 0.53 >More info Col-0 aerial part Original data
62 Transgenic LEC2GR Seedling 1h Dex -0.46 >More info -0.55 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
63 35S::PI ap3-3 35S::AP-GR +DEX -0.47 >More info -0.54 >More info 0hr DEX Original data GEO bulk
64 MG132 3 h -0.52 >More info -0.48 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
65 leaf blade in FRD 0.52 >More info 0.48 >More info leaf blade in WL leaf blades Original data GEO bulk
66 35S::HRE2 Aerobic 0.46 >More info 0.54 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
67 tmm1-inflorescence-tips -0.37 >More info -0.63 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
68 camta1-2 0.44 >More info 0.56 >More info Col-0-WT Original data GEO bulk
69 Col-0 DCA 48h -0.53 >More info -0.46 >More info Col-0 MOCK 48h Original data GEO bulk
70 psad1 0.46 >More info 0.53 >More info WS rosette leaves Original data GEO bulk
71 WT Red light 18h -0.41 >More info -0.58 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
72 pif4pif5 mut 1h FR -0.39 >More info -0.59 >More info WT 1h FR Original data GEO bulk
73 sid2 0.42 >More info 0.56 >More info Col rosettes Original data GEO bulk
74 mil4 sid2 0.46 >More info 0.52 >More info Col rosettes Original data GEO bulk
75 Col-0 mbs1-1 HL 0h -0.52 >More info -0.45 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
76 root - 08% oxygen - 48h -0.27 >More info -0.70 >More info root - 21% oxygen - 48h Original data GEO bulk
77 A2hsfa1-ox in quadruple mutant -0.46 >More info -0.51 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
78 Col-0 shade 0.38 >More info 0.59 >More info Col-0 light seedlings Original data GEO bulk
79 Col-0 DEX Shade 0.51 >More info 0.45 >More info Col-0 DEX WL seedlings Original data
80 30m light -0.36 >More info -0.60 >More info before light whole seedlings Original data GEO bulk
81 R. solani AG8 -0.44 >More info -0.52 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
82 WT cold -0.43 >More info -0.53 >More info WT control All aerial tissue Original data GEO bulk
83 essp4/sdg8-5 mutant -0.51 >More info -0.44 >More info wild type leaf Original data GEO bulk
84 FarRed Light 4 h -0.34 >More info -0.61 >More info White Light 4 h Original data Light treatments
85 JA -0.45 >More info -0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
86 ebs Pool 0.50 >More info 0.44 >More info Ler Pool seedling Original data GEO bulk
87 PNO8 3 h -0.52 >More info -0.42 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
88 Dark 4 h pls UV-A 5 min -0.34 >More info -0.60 >More info Dark 4 h Original data Light treatments
89 PNO8 12 h 0.38 >More info 0.55 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
90 Mutant pif1-2 (Dark etiol) 0.40 >More info 0.53 >More info Col-0 (Dark etiol) Original data GEO bulk
91 pif1-2 dark 0.40 >More info 0.53 >More info Wt dark Original data GEO bulk
92 M6PR transgenic leaf 0mM NaCl 0.39 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
93 cat2-2; 8h switch to ambient CO2 concentrations; -0.39 >More info -0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
94 pGL1::GL1-GR Dex 24hours 0.38 >More info 0.54 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
95 Mock pft1 leaf -0.39 >More info -0.53 >More info Mock Col-0 leaf water leaf Original data GEO bulk
96 amiR-tor induced 6d -0.37 >More info -0.55 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
97 Dark 3day wt 0.50 >More info 0.42 >More info 0h wt Original data
98 Red/FR Light 4 h 0.35 >More info 0.57 >More info FarRed Light 4 h Original data Light treatments
99 mil4 0.35 >More info 0.57 >More info Col rosettes Original data GEO bulk
100 pap1-D/tt4 0.40 >More info 0.51 >More info Col-0 aerial part Original data
101 long 12-degree- -0.30 >More info -0.61 >More info control long Original data GEO bulk
102 Whole root - low pH 24H -0.34 >More info -0.56 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
103 cop1 Seedling BL -0.50 >More info -0.40 >More info WT Seedling BL Original data GEO bulk
104 Dark 4 h pls RedLight 1min -0.31 >More info -0.59 >More info Dark 4 h Original data Light treatments
105 csn5 (csn5a-2 csn5b) light -0.51 >More info -0.38 >More info WT light Original data GEO bulk
106 Mutant sav3-2 (WL) -0.34 >More info -0.54 >More info Col-0 (WL) Original data GEO bulk
107 sav3-2 light -0.34 >More info -0.54 >More info Col-0 light seedlings Original data GEO bulk
108 Dark 2day wt 0.51 >More info 0.37 >More info 0h wt Original data
109 PBZ -0.35 >More info -0.53 >More info none PBZ Rosette Original data GEO bulk
110 Dark 6h hml 0.53 >More info 0.34 >More info 0h hml Original data
111 Col-0 +lincomycin 0.32 >More info 0.55 >More info Col-0 -lincomycin Original data GEO bulk
112 6h volatiles Sp. HRO-C48 0.50 >More info 0.37 >More info 6h untreated whole seedling Original data GEO bulk
113 piffq FR 1h -0.52 >More info -0.35 >More info WT FR 1h whole seedling Original data GEO bulk
114 Whole root - S 72H -0.35 >More info -0.52 >More info Whole root - S 0H Original data GEO bulk
115 WT+sucrose -0.29 >More info -0.57 >More info WT+no sugars rosette leaves Original data GEO bulk
116 Botrytis cinerea 48h -0.29 >More info -0.57 >More info control 48h Original data GEO bulk
117 phyABDE Rc50 -0.34 >More info -0.51 >More info phyABDE Dark red light whole seedling Original data GEO bulk
118 Col BTH 0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
119 MPK6 ox Shoot Hypoxia -0.32 >More info -0.52 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
120 Red Light 45min 0.31 >More info 0.52 >More info White Light 45min Original data Light treatments
121 MYB29 OE -0.31 >More info -0.52 >More info WT for MYB29/76 Original data GEO bulk
122 short 12-degree- -0.22 >More info -0.61 >More info control short Original data GEO bulk
123 short 17-degree- -0.18 >More info -0.64 >More info control short Original data GEO bulk
124 12h volatiles Sp. HRO-C48 0.30 >More info 0.51 >More info 12h untreated whole seedling Original data GEO bulk
125 WT light -0.30 >More info -0.51 >More info WT dark Original data GEO bulk
126 oas-a1.1 root -0.24 >More info -0.57 >More info WT-Untreated Root Original data GEO bulk
127 G3P -0.50 >More info -0.30 >More info Mock distal leaves Original data GEO bulk
128 CsUBC13-OE -Fe 0.25 >More info 0.55 >More info Col -Fe root Original data GEO bulk
129 sex1-3 0.30 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
130 root - 04% oxygen - 48h -0.15 >More info -0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
131 Light 0.5h steady-state -0.23 >More info -0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
132 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.27 >More info 0.52 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
133 ptpks2 -0.21 >More info -0.58 >More info Col-WT leaves Original data GEO bulk
134 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
135 WT Shoot Hypoxia -0.20 >More info -0.58 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
136 Col-0 mbs1-1 HL 3h 0.28 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
137 Red Light 4 h 0.19 >More info 0.58 >More info White Light 4 h Original data Light treatments
138 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
139 root - 01% oxygen - 48h -0.17 >More info -0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
140 M6PR transgenic leaf 100mM NaCl 0.24 >More info 0.52 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
141 amiRAP hypoxic 0.21 >More info 0.55 >More info hypoxic hypoxia Original data GEO bulk
142 Mutant iaa17-6 (IAA) -0.21 >More info -0.54 >More info Col (IAA) Original data GEO bulk
143 Stem tissue 5 days NAA -0.24 >More info -0.51 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
144 Aerobic e1 ate2 -0.21 >More info -0.54 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
145 scl3 -0.58 >More info -0.16 >More info Col-0 whole root Original data GEO bulk
146 CHS-silenced type 0.55 >More info 0.16 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
147 Shoot apex inflorescence (after bolting) 0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
148 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
149 ahg2-1sid2-2 -0.53 >More info -0.17 >More info WT (Col) control Original data GEO bulk
150 Elevated CO2 AMPLE N NIGHT -0.15 >More info -0.55 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
151 long 10-degree- -0.19 >More info -0.51 >More info control long Original data GEO bulk
152 ERF96OE -0.09 >More info -0.60 >More info WT leaf Original data
153 root - 04% oxygen - 30min -0.07 >More info -0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
154 Red/FR Light45min 0.03 >More info -0.70 >More info FarRed Light 45min Original data Light treatments
155 atmyc2 cop1 Seedling BL -0.51 >More info -0.15 >More info WT Seedling BL Original data GEO bulk
156 roots ethylene -0.13 >More info -0.51 >More info roots air Original data GEO bulk
157 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
158 pif4pif5 mut dark 0.01 >More info -0.63 >More info WT dark Original data GEO bulk
159 Heat shock optimum -0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
160 Ibuprofen 3 h -0.55 >More info -0.05 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
161 root - 01% oxygen - 30min -0.01 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
162 2hr continuous KNO3 PeR cell 0.07 >More info 0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
163 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
164 root - 04% oxygen - 2h 0.16 >More info -0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
165 WT NAA 1h -0.00 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
166 ABA control -0.05 >More info 0.56 >More info No ABA control Original data GEO bulk
167 Col0-PsmES4326-24hpi -0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
168 root - 08% oxygen - 2h 0.05 >More info -0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
169 siliques AtHb1 control -0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
170 Leafminer damaged seedlings -0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
171 root - 01% oxygen - 2h 0.14 >More info -0.51 >More info root - 21% oxygen - 2h Original data GEO bulk