4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root endodermis and quiescent center pH4.6
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List of experiments correlated with "root endodermis and quiescent center pH4.6"  Help Download transcriptome of top 30
Score Experiment Correlation from
root endodermis and quiescent center pH4.6		 Correlation to
root endodermis and quiescent center pH4.6		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root endodermis and quiescent center pH4.6 1.00 >More info 1.00 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
2 root cortex pH4.6 0.81 >More info 0.78 >More info root cortex pH5.7 Original data GEO bulk
3 root stele pH4.6 0.77 >More info 0.77 >More info root stele pH5.7 Original data GEO bulk
4 root epidermis and lateral root cap pH4.6 0.69 >More info 0.64 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
5 root cells endodermis 140mM NaCl 3 hours 0.68 >More info 0.58 >More info root cells endodermis standard 1 hour root cells endodermis Original data
6 root longitudinal zone-3 pH 4.6 0.61 >More info 0.65 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
7 root columella root cap pH4.6 0.70 >More info 0.54 >More info root columella root cap pH5.7 Original data GEO bulk
8 root cells endodermis 140mM NaCl 8 hours 0.67 >More info 0.56 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root stele -S 0.56 >More info 0.65 >More info root stele pH5.7 Original data GEO bulk
10 Whole root - low pH 12H 0.64 >More info 0.54 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
11 Whole root - low pH 24H 0.64 >More info 0.53 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
12 root cells cortex 140mM NaCl 32 hours 0.65 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
13 root cells cortex 140mM NaCl 8 hours 0.64 >More info 0.53 >More info root cells cortex standard 1 hour root cells cortex Original data
14 prors1-2 leaves 0.54 >More info 0.62 >More info Col-0 leaves leaves Original data
15 root cells cortex 140mM NaCl 20 hours 0.68 >More info 0.48 >More info root cells cortex standard 1 hour root cells cortex Original data
16 root cells cortex 140mM NaCl 3 hours 0.65 >More info 0.47 >More info root cells cortex standard 1 hour root cells cortex Original data
17 GO5; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
18 root cells endodermis 140mM NaCl 20 hours 0.64 >More info 0.47 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 ahg2-1sid2-2 0.51 >More info 0.60 >More info WT (Col) control Original data GEO bulk
20 Cocultivation 8 hrs root 0.59 >More info 0.52 >More info Mock cocultivation 8 hrs root Root Original data
21 msh1 recA3 untreated 0.51 >More info 0.60 >More info WT untreated above-ground parts Original data GEO bulk
22 Imidazolinone EC50 0.59 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
23 root cells endodermis 140mM NaCl 48 hours 0.65 >More info 0.45 >More info root cells endodermis standard 1 hour root cells endodermis Original data
24 35S::PI ap3-3 35S::AP-GR +DEX 0.54 >More info 0.54 >More info 0hr DEX Original data GEO bulk
25 msh1 recA3 heat shock 0.57 >More info 0.51 >More info WT heat shock above-ground parts Original data GEO bulk
26 Tsu -Fe 24h Roots 0.57 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
27 Tsu-1 -Fe 24h 0.57 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
28 sicy-192 gun1-101 cotyledons 0.59 >More info 0.48 >More info WT cotyledons cotyledons Original data
29 Norflurazon 0.53 >More info 0.53 >More info Col-0 Original data GEO bulk
30 Norflurazon 0.53 >More info 0.53 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
31 OXUPB1-2 meristematic zone 0.47 >More info 0.59 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
32 ahg2-1 0.55 >More info 0.50 >More info WT (Col) control Original data GEO bulk
33 ahg1-1 0.44 >More info 0.61 >More info ABA control Original data GEO bulk
34 SCR 48hr-S 0.46 >More info 0.59 >More info SCR 0hr endodermis Original data
35 root cells endodermis 140mM NaCl 1 hour 0.58 >More info 0.47 >More info root cells endodermis standard 1 hour root cells endodermis Original data
36 root cells cortex 140mM NaCl 48 hours 0.66 >More info 0.38 >More info root cells cortex standard 1 hour root cells cortex Original data
37 root cells endodermis 140mM NaCl 32 hours 0.65 >More info 0.39 >More info root cells endodermis standard 1 hour root cells endodermis Original data
38 red illumination +lincomycin 0.33 >More info 0.71 >More info red illumination -lincomycin Original data GEO bulk
39 SCR 96hr-S 0.43 >More info 0.61 >More info SCR 0hr endodermis Original data
40 whole roots -Fe 72 hour 0.55 >More info 0.48 >More info whole roots standard Original data GEO bulk
41 Fe starvation 72 h 0.55 >More info 0.48 >More info Control Original data GEO bulk
42 SCR 72hr-S 0.43 >More info 0.59 >More info SCR 0hr endodermis Original data
43 sta1 0.60 >More info 0.41 >More info WT Original data GEO bulk
44 csn5 (csn5a-2 csn5b) dark 0.55 >More info 0.46 >More info WT dark Original data GEO bulk
45 SA 0.58 >More info 0.43 >More info WT mock Whole seedling Original data GEO bulk
46 SCR 24hr-S 0.44 >More info 0.57 >More info SCR 0hr endodermis Original data
47 root cells cortex 140mM NaCl 1 hour 0.54 >More info 0.46 >More info root cells cortex standard 1 hour root cells cortex Original data
48 cdpk6-yfp 0.47 >More info 0.52 >More info Kan seedlings Original data GEO bulk
49 csn5 (csn5a-2 csn5b) light 0.62 >More info 0.36 >More info WT light Original data GEO bulk
50 whole roots -Fe 48 hour 0.51 >More info 0.46 >More info whole roots standard Original data GEO bulk
51 R. solani AG8 0.53 >More info 0.44 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
52 GA4 3 h (ga1 seed) 0.56 >More info 0.40 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
53 roots IAA 0.56 >More info 0.40 >More info roots mock Original data GEO bulk
54 Root -Cs 0.60 >More info 0.36 >More info Control-root Original data GEO bulk
55 UV 0.57 >More info 0.39 >More info WT aerial region Original data GEO bulk
56 (Col-0)+200 uM As 0.61 >More info 0.35 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
57 Triazolopyrimidine EC50 0.59 >More info 0.37 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
58 Primisulfuron EC50 0.60 >More info 0.35 >More info Carrier (primisulfuron) Original data GEO bulk
59 bri1-116 0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
60 TNT-seedlings 0.51 >More info 0.43 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
61 Col-0 low oxygen 0.53 >More info 0.40 >More info Col-0 control low oxygen root Original data GEO bulk
62 csn4-1 mutant 0.55 >More info 0.38 >More info WT dark Original data GEO bulk
63 csn3-1 light 0.62 >More info 0.31 >More info WT light Original data GEO bulk
64 Leaf GLU1-KO 0.58 >More info 0.35 >More info Leaf Col(0) rosette leaves Original data GEO bulk
65 intact root auxin 0.56 >More info 0.36 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
66 Nicotinamide-81hr 0.56 >More info 0.36 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
67 IMI 4mM 0.55 >More info 0.37 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
68 csn3-1 dark 0.53 >More info 0.39 >More info WT dark Original data GEO bulk
69 noa1-2 0.51 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
70 Col-0 6h NAA 0.51 >More info 0.41 >More info Col-0 6h MOCK Original data GEO bulk
71 dicamba 0.53 >More info 0.38 >More info WT mock whole seedling Original data GEO bulk
72 Sulfometuron EC50 0.61 >More info 0.30 >More info Carrier Original data GEO bulk
73 Cs shoot -0.22 >More info -0.69 >More info control shoot Original data GEO bulk
74 atgsnor1-3-avrB-6h 0.53 >More info 0.37 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
75 seed germinating in countinuous light 24h SL 0.23 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
76 gun1-9 norflurazon 0.55 >More info 0.34 >More info gun1-9 control Original data GEO bulk
77 NAA 6h 0.50 >More info 0.38 >More info before treatment NAA root Original data GEO bulk
78 embryo paclobutrazol 0.50 >More info 0.38 >More info embryo-control paclobutrazol embryo Original data GEO bulk
79 aox1a:rpoTmp untreated 0.51 >More info 0.37 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
80 CMP 4hr 0.53 >More info 0.34 >More info Acetone 4hr root Original data GEO bulk
81 gun5 norflurazon 0.51 >More info 0.36 >More info gun5 control Original data GEO bulk
82 21h-DC3000 hrpA 0.31 >More info 0.55 >More info 21h-DC3000 leaves Original data GEO bulk
83 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
84 msh1 stunt 0.50 >More info 0.36 >More info WT Col-0 above ground part of plant Original data GEO bulk
85 GiantCell Root 0.56 >More info 0.29 >More info Control Root laser captured giant cells Original data GEO bulk
86 rao2 AntimycinA 3h -0.52 >More info -0.33 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
87 Differentiation 12h 0.53 >More info 0.32 >More info Differentiation 0h leaves Original data
88 rao2 H2O2 3h -0.51 >More info -0.34 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
89 hni9 high nitrogen 0.57 >More info 0.28 >More info WT high nitrogen roots Original data GEO bulk
90 Col-0 under 4 days salt 0.50 >More info 0.34 >More info Col-0 under control 4 days salt treatment rosette Original data
91 Nicotinamide-61hr 0.53 >More info 0.31 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
92 clf-28 swn-7 0.57 >More info 0.27 >More info Col whole plant Original data GEO bulk
93 21h-DC3000 avrRpm1 0.25 >More info 0.59 >More info 21h-DC3000 leaves Original data GEO bulk
94 aox1a(line) MLD stressed 0.50 >More info 0.33 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
95 5-Triiodobenzoic acid3 h 0.50 >More info 0.33 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
96 nia1nia2noa1-2 0.56 >More info 0.27 >More info Col-0 whole seedlings Original data GEO bulk
97 Col leaves 48h LT 0.51 >More info 0.31 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
98 SCR-GR Time 6H Dex -0.56 >More info -0.26 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
99 WT 30μM arsenate 8 hours. 0.51 >More info 0.30 >More info WT control (not supplemented). Original data
100 JA 24h -0.30 >More info -0.51 >More info EtOH 24h 24hr Original data GEO bulk
101 (Col-0)+100 uM As 0.51 >More info 0.29 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
102 SHR-GR Time 12H Dex 0.50 >More info 0.30 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
103 oligomycin 1 h 0.27 >More info 0.53 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
104 pnp1-1 1wk -P 0.55 >More info 0.24 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
105 E2Fa-Dpa 0.53 >More info 0.26 >More info WT Original data GEO bulk
106 pnp1-1 3h +P 0.50 >More info 0.29 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
107 Nicotinamide-89hr 0.52 >More info 0.27 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
108 Col-0 norflurazon 0.54 >More info 0.24 >More info Col-0 control Original data GEO bulk
109 Nicotinamide-93hr 0.55 >More info 0.21 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
110 Mock pft1 leaf 0.23 >More info 0.53 >More info Mock Col-0 leaf water leaf Original data GEO bulk
111 Shoot apex inflorescence (after bolting) 0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
112 root epidermis and lateral root cap -S 0.21 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
113 Leafminer damaged seedlings 0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
114 Col0-PsmES4326-24hpi 0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
115 seedlings +5AC 0.52 >More info 0.20 >More info control seedlings 10-day old whole seedling Original data GEO bulk
116 Differentiation 24h 0.50 >More info 0.22 >More info Differentiation 0h leaves Original data
117 ANOXIA 0.21 >More info 0.51 >More info ANOXIA+SUCROSE Original data GEO bulk
118 Heat shock optimum 0.07 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
119 6h volatiles Sm. R3089 0.19 >More info 0.53 >More info 6h untreated whole seedling Original data GEO bulk
120 COL-0-Fe--root 0.55 >More info 0.16 >More info COL-0-Ctrl--root root Original data
121 Laer pretreat GA Flg22 1h -0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
122 Full C2 T3 -0.20 >More info -0.51 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
123 ARR21C-ox 0.59 >More info 0.11 >More info Col-0 Original data ARR21C overexpression
124 atmospheric CO2 low Mg shoot 0.52 >More info 0.16 >More info atmospheric CO2 normal Mg shoot Shoot Original data
125 ara1/2mut 0.12 >More info 0.54 >More info Col-3 Original data GEO bulk
126 siliques AtHb1 control 0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
127 ice1 control 0.51 >More info 0.11 >More info WT control Original data GEO bulk
128 Whole root - low pH 1H 0.12 >More info 0.50 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
129 SA Treated 0.50 >More info 0.08 >More info Water Original data GEO bulk
130 ice1 6H Cold 0.51 >More info 0.03 >More info WT 6H Cold Original data GEO bulk
131 Lip0 UV 0.11 >More info -0.65 >More info Lip0 mock UV seedling Original data
132 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
133 pGL3::GL3-GR Dex 4 hours -0.04 >More info 0.57 >More info pGL3::GL3-GR mock 4 hours Original data GEO bulk
134 Blue Light 45 min 0.01 >More info -0.53 >More info White Light 45min Original data Light treatments
135 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
136 vtc2-1 0.05 >More info -0.50 >More info Col-0 whole plant Original data GEO bulk
137 35S:VND7-VP16-GR+CHX 0.32 >More info -0.66 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk