4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Root -K
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List of experiments correlated with "Root -K"  Help Download transcriptome of top 30
Score Experiment Correlation from
Root -K		 Correlation to
Root -K		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Root -K 1.00 >More info 1.00 >More info Control-root Original data GEO bulk
2 K starvation (root) 1.00 >More info 1.00 >More info Ws (root) Original data GEO bulk
3 root endodermis and quiescent center 40 mM NaCl 0.61 >More info 0.67 >More info root endodermis and quiescent center Original data GEO bulk
4 5-Triiodobenzoic acid3 h 0.69 >More info 0.59 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 Phytoprostane A1 4 h 0.67 >More info 0.60 >More info Col-0 Original data GEO bulk
6 cngc4 0.60 >More info 0.67 >More info Ws-2 Seedlings Original data GEO bulk
7 TNT-seedlings 0.53 >More info 0.72 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
8 6h +Pi -0.60 >More info -0.64 >More info 6h -Pi root Original data GEO bulk
9 3m.KCl 0.60 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
10 Fenclorim 24hr 0.69 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
11 AgNO3 3 h 0.61 >More info 0.60 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
12 whole roots 140 mM NaCl 30 minutes 0.55 >More info 0.65 >More info whole roots standard Original data GEO bulk
13 low CO2 + light 0.52 >More info 0.68 >More info normal CO2 + light Original data GEO bulk
14 Col-0 low oxygen 0.58 >More info 0.62 >More info Col-0 control low oxygen root Original data GEO bulk
15 root longitudinal zone-4 -Fe 0.50 >More info 0.70 >More info root longitudinal zone-4 standard Original data GEO bulk
16 Whole root - low pH 12H 0.59 >More info 0.61 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
17 agb1 -ABA LF 0.34 >More info 0.86 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
18 NaCl Col 0.57 >More info 0.62 >More info Col Original data GEO bulk
19 plant (tga2-5-6) 4h phytoprostane A1 0.54 >More info 0.64 >More info plant (tga2-5-6) 4h control Original data GEO bulk
20 whole roots 140 mM NaCl 1 hour 0.51 >More info 0.66 >More info whole roots standard Original data GEO bulk
21 SA 0.63 >More info 0.54 >More info WT mock Whole seedling Original data GEO bulk
22 Col -Fe 0.58 >More info 0.57 >More info Col-es root Original data GEO bulk
23 WT roots - Fe 0.66 >More info 0.49 >More info WT roots + Fe Roots Original data GEO bulk
24 9 hr Hypoxia Total RNA 0.65 >More info 0.49 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
25 Nicotinamide-85hr 0.59 >More info 0.54 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
26 phr1 Shoot-Pi 0.54 >More info 0.58 >More info WT Root-Pi shoots Original data GEO bulk
27 iron minus 0 h 0.48 >More info 0.63 >More info iron +0 h root Original data GEO bulk
28 afb3-1 2h KNO3 0.53 >More info 0.57 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
29 WT+H2O2 0.57 >More info 0.53 >More info WT H2O2 Original data GEO bulk
30 root longitudinal zone-4 NaCl 0.59 >More info 0.50 >More info root longitudinal zone-4 Original data GEO bulk
31 plant (Col-0) 4h phytoprostane A1 0.61 >More info 0.48 >More info plant (tga2-5-6) 4h control Original data GEO bulk
32 BLM 0.61 >More info 0.47 >More info CK BLM seedling Original data
33 SCR-GR Time 12H Dex 0.50 >More info 0.58 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
34 dorn1-1 Root 100 mM ATP 30 min -0.42 >More info -0.66 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
35 WT-16ºC -0.53 >More info -0.54 >More info WT-23ºC Original data GEO bulk
36 COL-0-Fe--root 0.55 >More info 0.51 >More info COL-0-Ctrl--root root Original data
37 Col0-PsmES4326-24hpi 0.45 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
38 Roots Cd -0.43 >More info -0.63 >More info Roots control Cd Root Original data GEO bulk
39 Col-0 Root 100 mM ATP 30 min 0.44 >More info 0.62 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
40 Nicotinamide-53hr 0.59 >More info 0.46 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
41 OXUPB1-2 meristematic zone 0.59 >More info 0.46 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
42 sfr6 drought -0.29 >More info -0.76 >More info WT drought All aerial tissue Original data GEO bulk
43 2 hr Hypoxia Total RNA 0.57 >More info 0.47 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
44 BLM+INA 0.60 >More info 0.44 >More info CK BLM and INA seedling Original data
45 P.p 6hai 0.63 >More info 0.40 >More info At-Control roots Original data GEO bulk
46 root cells cortex 140mM NaCl 1 hour 0.52 >More info 0.51 >More info root cells cortex standard 1 hour root cells cortex Original data
47 root stele 40 mM NaCls 0.50 >More info 0.53 >More info root stele Original data GEO bulk
48 Fenclorim 4hr 0.61 >More info 0.42 >More info Acetone 4hr root Original data GEO bulk
49 Osmotic Stress 24 h (root) 0.50 >More info 0.53 >More info Stress mock 24 h (root) Original data Stress treatments
50 Whole root - low pH 24H 0.47 >More info 0.56 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
51 pepr1-1 Pepr2-3 +Pep2 10h -0.55 >More info -0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
52 CMP 4hr 0.59 >More info 0.43 >More info Acetone 4hr root Original data GEO bulk
53 Ibuprofen 3 h 0.51 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
54 6m.KCl 0.52 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
55 dicamba 0.57 >More info 0.45 >More info WT mock whole seedling Original data GEO bulk
56 WT (Col) glucose -0.43 >More info -0.59 >More info WT (Col) glucose seedlings Original data GEO bulk
57 bak1-3 +Pep2 10h 0.57 >More info 0.44 >More info WT +Pep2 10h Pep2 Original data GEO bulk
58 4d red light grown hmr-5 seedlings 0.60 >More info 0.41 >More info 4d red light grown WT(Col-0) seedlings Original data
59 SA 4mM 0.46 >More info 0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
60 Nicotinamide-77hr 0.58 >More info 0.42 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
61 seedlings-week-old RECA1-overexpressing
transgenic		 0.55 >More info 0.45 >More info seedlings-week-old Col-0 seedlings Original data
62 arp6-10 12 ºC -0.39 >More info -0.61 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
63 root cells endodermis 140mM NaCl 3 hours 0.51 >More info 0.48 >More info root cells endodermis standard 1 hour root cells endodermis Original data
64 3m.KNO3 0.50 >More info 0.49 >More info To. KNO3 14 day old Roots Original data GEO bulk
65 P.p 30hai 0.66 >More info 0.33 >More info At-Control roots Original data GEO bulk
66 Nicotinamide-73hr 0.52 >More info 0.47 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
67 8hr-pH4.5 0.44 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
68 agb1 gpa1 -ABA LF 0.37 >More info 0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
69 12m.KCl 0.48 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
70 Root dark control 24h 0.44 >More info 0.55 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
71 IAA/inhibitor B Treated 0.39 >More info 0.59 >More info IAA Treated Original data GEO bulk
72 ABA SA 24h 0.29 >More info 0.69 >More info EtOH 24h 24hr Original data GEO bulk
73 root cells stele 140mM NaCl 3 hours 0.50 >More info 0.47 >More info root cells stele standard 1 hour root cells stele Original data
74 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
75 SAM SE agl15 agl18 double mutant 0.33 >More info 0.64 >More info SAM SE Col Original data GEO bulk
76 whole roots -Fe 72 hour 0.54 >More info 0.42 >More info whole roots standard Original data GEO bulk
77 Fe starvation 72 h 0.54 >More info 0.42 >More info Control Original data GEO bulk
78 low CO2 + dark 0.45 >More info 0.51 >More info normal CO2 + light Original data GEO bulk
79 SCR-GR Time 3H Dex 0.39 >More info 0.56 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
80 Nicotinamide-69hr 0.50 >More info 0.45 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
81 Anoxia 0.42 >More info 0.53 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
82 toc1-1-85hr 0.31 >More info 0.64 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
83 Tsu-1 -Fe 48h 0.38 >More info 0.57 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
84 Tsu -Fe 48h Roots 0.38 >More info 0.57 >More info Tsu +Fe 24h Roots Original data GEO bulk
85 bHLH122 ox -0.37 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
86 Nicotinamide-89hr 0.54 >More info 0.40 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
87 Nicotinamide-57hr 0.57 >More info 0.37 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
88 ABA JA 24h 0.30 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
89 WT 30μM arsenate 8 hours. 0.44 >More info 0.50 >More info WT control (not supplemented). Original data
90 Shoot -K 0.52 >More info 0.41 >More info Control-shoot Original data GEO bulk
91 K starvation (shoot) 0.52 >More info 0.41 >More info Ws (shoot) Original data GEO bulk
92 RRE2 Chitin 0.53 >More info 0.39 >More info Chitin Original data GEO bulk
93 Leafminer damaged seedlings 0.36 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
94 myb3 myb3r4d 0.30 >More info 0.62 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
95 CeO2 germinant -0.34 >More info -0.58 >More info Millipore Water germinant CeO2 seedling Original data
96 R. solani AG8 0.51 >More info 0.40 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
97 IMI 4mM 0.51 >More info 0.40 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
98 ABA 24h 0.38 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
99 root cells stele 140mM NaCl 1 hour 0.50 >More info 0.41 >More info root cells stele standard 1 hour root cells stele Original data
100 oligomycin 1 h 0.31 >More info 0.60 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
101 iron minus 24h 0.22 >More info 0.68 >More info iron +24h root Original data GEO bulk
102 WT H2O2 3h 0.39 >More info 0.51 >More info WT water 3h 3h_H2O2 Original data GEO bulk
103 bbx24 in Simulated Shade -0.33 >More info -0.57 >More info WT in simulated shade shade seedling Original data
104 9 hr Hypoxia IP RNA 0.53 >More info 0.36 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
105 21h-DC3000 hrpA -0.28 >More info -0.61 >More info 21h-DC3000 leaves Original data GEO bulk
106 toc1-1-77hr 0.38 >More info 0.51 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
107 root longitudinal zone-1 low sulfur -0.36 >More info -0.53 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
108 ABA DFPM 0.57 >More info 0.32 >More info control Original data GEO bulk
109 CMP 24hr 0.60 >More info 0.29 >More info Acetone 24hr root Original data GEO bulk
110 Nicotinamide-81hr 0.55 >More info 0.33 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
111 Col-0 2HS 0.50 >More info 0.38 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
112 whole roots -Fe 6 hour 0.30 >More info 0.58 >More info whole roots standard Original data GEO bulk
113 SCR-GR Time 1H Dex 0.31 >More info 0.57 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
114 des1.1 0.33 >More info 0.54 >More info Leaves-WT leaf Original data GEO bulk
115 toc1-1-53hr 0.32 >More info 0.55 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
116 P.p 10.5hai 0.61 >More info 0.26 >More info At-Control roots Original data GEO bulk
117 embryo paclobutrazol 0.50 >More info 0.37 >More info embryo-control paclobutrazol embryo Original data GEO bulk
118 embryo ABA 0.50 >More info 0.37 >More info embryo-control ABA embryo Original data GEO bulk
119 coi1-2 0.52 >More info 0.34 >More info Col-0 mock Whole seedling Original data GEO bulk
120 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
121 oas-a1.1 Cd 18h 0.35 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
122 35S::LFY 0.36 >More info 0.50 >More info Landsberg erecta seedlings Original data GEO bulk
123 root Dosed gold 0.50 >More info 0.35 >More info root No gold .125 mM gold 24 h roots Original data
124 0.125 mM gold 24 h 0.50 >More info 0.35 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
125 4C 1h 0.28 >More info 0.57 >More info 4C 0h Original data GEO bulk
126 Root -P -0.51 >More info -0.33 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
127 bri1-116 0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
128 DFPM 0.55 >More info 0.28 >More info control Original data GEO bulk
129 aux1 mutant roots ethylene 0.31 >More info 0.52 >More info roots air Original data GEO bulk
130 del1-1 mutant 5d uninfected 0.27 >More info 0.56 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
131 iron minus 6 h 0.23 >More info 0.60 >More info iron +6 h root Original data GEO bulk
132 roottip control pWOL 0.32 >More info 0.50 >More info roottip control total control roottip Original data GEO bulk
133 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
134 bak1-3 +Pep2 2h 0.52 >More info 0.28 >More info WT +Pep2 2h Pep2 Original data GEO bulk
135 21h-DC3000 avrRpm1 -0.28 >More info -0.52 >More info 21h-DC3000 leaves Original data GEO bulk
136 WT drought 0.27 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
137 root longitudinal zone-3 NaCl 0.30 >More info 0.50 >More info root longitudinal zone-3 Original data GEO bulk
138 root longitudinal zone-1 pH 4.6 0.24 >More info 0.55 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
139 afb3-1 2h KCl -0.20 >More info -0.59 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
140 Root P recovery 0.52 >More info 0.26 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
141 WR 35S 8h BL 0.51 >More info 0.27 >More info WR 35S 0h BL brassinosteroid root Original data
142 WT 3H Cold 0.23 >More info 0.54 >More info WT control Original data GEO bulk
143 CMV-WT 0.50 >More info 0.26 >More info Mock-At Aerial tissues Original data GEO bulk
144 Prohexadione 12 h 0.50 >More info 0.26 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
145 Col-0 HS 0.15 >More info 0.61 >More info Col-0 control heat shocked seedling Original data GEO bulk
146 WT (Col-0) heat shock 0.15 >More info 0.61 >More info WT (Col-0) whole seedling Original data GEO bulk
147 gpa1 -ABA GC -0.24 >More info -0.50 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
148 A. halleri highZn-leaf 0.12 >More info 0.62 >More info A. petraea highZn-leaf Original data GEO bulk
149 ptpks2 -0.16 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
150 Chemically 0.17 >More info 0.54 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
151 root longitudinal zone-2 -Fe 0.16 >More info 0.53 >More info root longitudinal zone-2 standard Original data GEO bulk
152 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
153 Nicotinamide-49hr 0.50 >More info 0.18 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
154 Propiconazole 12 h 0.51 >More info 0.11 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
155 non-polysome mRNA eif3k -0.06 >More info -0.53 >More info non-polysome mRNA WT aerial part Original data GEO bulk
156 SA Treated 0.51 >More info 0.08 >More info Water Original data GEO bulk
157 Rose Bengal 0.5 uM 0.06 >More info 0.50 >More info Control RB and PER Rose Bengal Original data
158 3x(m) 0.02 >More info 0.53 >More info 2x two week old seedlings Original data
159 siliques AtHb1 control 0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
160 seed germinating in countinuous light 24h SL -0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
161 opr3 JA 0.5 h -0.00 >More info 0.51 >More info opr3 0 h Original data GEO bulk
162 Shoot apex inflorescence (after bolting) -0.15 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
163 root longitudinal zone-3 -Fe -0.09 >More info 0.57 >More info root longitudinal zone-3 standard Original data GEO bulk
164 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
165 4d red light grown hmr-22 seedlings 0.63 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
166 SHR-GR Time 6H Dex 0.09 >More info -0.51 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
167 Ler KAR1 24h seed -0.17 >More info 0.51 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk