4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S:PCO1 hypoxia
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List of experiments correlated with "35S:PCO1 hypoxia"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S:PCO1 hypoxia		 Correlation to
35S:PCO1 hypoxia		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S:PCO1 hypoxia 1.00 >More info 1.00 >More info WT hypoxia whole rosette Original data
2 root - 04% oxygen - 2h -0.72 >More info -0.69 >More info root - 21% oxygen - 2h Original data GEO bulk
3 root - 08% oxygen - 2h -0.64 >More info -0.75 >More info root - 21% oxygen - 2h Original data GEO bulk
4 WT Root Hypoxia -0.65 >More info -0.68 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
5 root - 04% oxygen - 30min -0.70 >More info -0.63 >More info root - 21% oxygen - 30min Original data GEO bulk
6 root - 01% oxygen - 2h -0.64 >More info -0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
7 root - 04% oxygen - 48h -0.66 >More info -0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
8 Col-0 wt Hypoxic -0.67 >More info -0.62 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
9 MPK6 ox Shoot Hypoxia -0.56 >More info -0.72 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
10 Aerobic e1 ate2 -0.65 >More info -0.61 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
11 Aerobic prt6 -0.66 >More info -0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
12 root - 08% oxygen - 30min -0.56 >More info -0.65 >More info root - 21% oxygen - 30min Original data GEO bulk
13 WT Shoot Hypoxia -0.60 >More info -0.61 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
14 root - 01% oxygen - 30min -0.63 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
15 MPK6 ox Root Hypoxia -0.64 >More info -0.54 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
16 20m.KCl 0.64 >More info 0.44 >More info To. KCl 14 day old Roots Original data GEO bulk
17 shoot hypoxia total -0.52 >More info -0.51 >More info shoot control total Original data GEO bulk
18 root - 01% oxygen - 48h -0.62 >More info -0.41 >More info root - 21% oxygen - 48h Original data GEO bulk
19 roottip hypoxia total -0.52 >More info -0.51 >More info roottip control total Original data GEO bulk
20 Light -0.58 >More info -0.44 >More info Control Original data GEO bulk
21 Col upon hypoxia 6 hrs -0.67 >More info -0.35 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
22 Polysomal RNA 35S:AtCSP1-FH1 -0.50 >More info -0.51 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
23 pepr1-1 Pepr2-3 untreated -0.54 >More info -0.47 >More info WT untreated untreated Original data GEO bulk
24 root hypoxia total -0.58 >More info -0.42 >More info root control total Original data GEO bulk
25 root - 08% oxygen - 48h -0.49 >More info -0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
26 Col-0 2HS -0.56 >More info -0.42 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
27 tumour -0.65 >More info -0.30 >More info non-tumor tumour Original data GEO bulk
28 prt6-1 -0.67 >More info -0.26 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
29 CeO2 germinant 0.63 >More info 0.25 >More info Millipore Water germinant CeO2 seedling Original data
30 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
31 mbd4 mutant thaliana 10-day-old seedling -0.58 >More info -0.30 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
32 cngc1-3 -0.59 >More info -0.29 >More info Col-0 root Original data GEO bulk
33 mdh 0.53 >More info 0.32 >More info Col Original data GEO bulk
34 spx1 spx2 complete 0.50 >More info 0.34 >More info WT complete seedlings Original data
35 OE-HRA1 2HS  0.54 >More info 0.30 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
36 GV3101 6dpi -0.60 >More info -0.24 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
37 C58 35dpi -0.63 >More info -0.21 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
38 mbd6 mutant thaliana 10-day-old seedling -0.50 >More info -0.33 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
39 Stem tissue 5 days NAA -0.63 >More info -0.20 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
40 PRR5-VP 12h light on 0.60 >More info 0.23 >More info WT 12h light on whole plant Original data GEO bulk
41 gun5 control -0.61 >More info -0.20 >More info Col-0 control Original data GEO bulk
42 shoot control p35S -0.16 >More info -0.65 >More info shoot control total Original data GEO bulk
43 etr1 1% sucrose 12-day-old -0.59 >More info -0.21 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
44 opr3 OPDA 0.5 h -0.21 >More info -0.59 >More info opr3 0 h Original data GEO bulk
45 R. sylvestris submerged -0.61 >More info -0.18 >More info R. sylvestris air Original data GEO bulk
46 35S:ATR1 like miR 0.25 >More info 0.54 >More info WT for miR Original data GEO bulk
47 amiRAP hypoxic 0.56 >More info 0.22 >More info hypoxic hypoxia Original data GEO bulk
48 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
49 mutant-line409 -0.53 >More info -0.24 >More info WT-control whole plant Original data GEO bulk
50 msg2-BR -0.56 >More info -0.20 >More info BR BR dark-grown seedlings Original data GEO bulk
51 9 hr Hypoxia Total RNA -0.50 >More info -0.25 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
52 ABA 1 h 0.16 >More info 0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
53 Imbibed 1 h (seed) -0.24 >More info -0.51 >More info Dry seed Original data Time course of early seed germination
54 shoot hypoxia p35S -0.07 >More info -0.68 >More info shoot hypoxia total Original data GEO bulk
55 whole roots -Fe 72 hour -0.50 >More info -0.24 >More info whole roots standard Original data GEO bulk
56 Col-O low light -0.56 >More info -0.18 >More info Col-O bule light Original data GEO bulk
57 Fe starvation 72 h -0.50 >More info -0.24 >More info Control Original data GEO bulk
58 cys-c1 root -0.61 >More info -0.12 >More info Root-WT roots Original data GEO bulk
59 Elevated CO2 AMPLE N DAY -0.51 >More info -0.22 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
60 R. amphibia submerged -0.56 >More info -0.16 >More info R. amphibia air Original data GEO bulk
61 9 hr Hypoxia 1 hr recovery Total RNA -0.52 >More info -0.20 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
62 Tsu -Fe 24h Roots -0.54 >More info -0.18 >More info Tsu +Fe 24h Roots Original data GEO bulk
63 Tsu-1 -Fe 24h -0.54 >More info -0.18 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
64 cngc19 -0.54 >More info -0.17 >More info Col-0 root Original data GEO bulk
65 myb50 xylem -0.54 >More info -0.16 >More info wt xylem xylem Original data GEO bulk
66 9 hr Hypoxia 1 hr recovery IP RNA -0.52 >More info -0.18 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
67 Hypoxic prt6 -0.50 >More info -0.19 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
68 hypoxic -0.58 >More info -0.10 >More info WT aerobic hypoxia Original data GEO bulk
69 cngc1 0.51 >More info 0.16 >More info Ws-2 Seedlings Original data GEO bulk
70 Col-0 low oxygen -0.50 >More info -0.17 >More info Col-0 control low oxygen root Original data GEO bulk
71 ckh2 CK25 -0.61 >More info -0.05 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
72 SCL3 OE 0.51 >More info 0.15 >More info Col-0 whole root Original data GEO bulk
73 35S:CDO1 normoxia 0.60 >More info 0.04 >More info WT normoxia normoxia whole rosette Original data
74 35S-MIF1 dark grown -0.54 >More info -0.10 >More info Dark-grown WT control Original data GEO bulk
75 CCA1-ox 6am non-polysomal 0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
76 6m.KNO3 0.58 >More info 0.06 >More info To. KNO3 14 day old Roots Original data GEO bulk
77 Mutant iaa5_6_19 -0.57 >More info -0.07 >More info Col Original data GEO bulk
78 xyl-grown cell culture- 1h 1mM Suc -0.10 >More info -0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
79 opr3 OPDA 8 h -0.07 >More info -0.55 >More info opr3 0 h Original data GEO bulk
80 Root submergence 24h -0.51 >More info -0.11 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
81 Shoot apex inflorescence (after bolting) -0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
82 1.5 hr ammonium -0.51 >More info -0.10 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
83 Cambium 5 days NAA -0.53 >More info -0.08 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
84 Te 3d -0.55 >More info -0.05 >More info Te CA Leaves Original data
85 8 hr ammonium -0.51 >More info -0.09 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
86 elevated CO2 high Mg root 0.52 >More info 0.07 >More info atmospheric CO2 high Mg root Root Original data
87 Cs root 0.64 >More info -0.05 >More info control root Original data GEO bulk
88 ckh1 CK25 -0.50 >More info -0.09 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
89 35S::HRE1 Hypoxic -0.51 >More info -0.07 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
90 24h +Pi 0.52 >More info 0.06 >More info 24h -Pi root Original data GEO bulk
91 seedlings + TSA -0.53 >More info -0.05 >More info control seedlings 10-day old whole seedling Original data GEO bulk
92 root callus inducing medium 12 h 0.50 >More info 0.08 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
93 C58 6dpi -0.50 >More info -0.08 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
94 elevated CO2 normal Mg root 0.56 >More info 0.01 >More info atmospheric CO2 normal Mg root Root Original data
95 dsr1 0.53 >More info 0.04 >More info WT mock Whole seedling Original data GEO bulk
96 F1 hybrid submerged -0.57 >More info 0.01 >More info F1 hybrid air Original data GEO bulk
97 RRE1 -0.58 >More info 0.02 >More info Col C Original data GEO bulk
98 siliques WT hypoxia -0.57 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
99 ani1 T16 0.58 >More info -0.02 >More info WT T16 root tissue Original data GEO bulk
100 RRE2 Chitin -0.51 >More info -0.04 >More info Chitin Original data GEO bulk
101 iron minus 6 h 0.56 >More info -0.01 >More info iron +6 h root Original data GEO bulk
102 ABA 0.5 h -0.00 >More info 0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
103 9m.KNO3 0.54 >More info -0.01 >More info To. KNO3 14 day old Roots Original data GEO bulk
104 hog1-7 -0.50 >More info -0.02 >More info wt whole seedling Original data GEO bulk
105 PRR5-VP 6h light on 0.50 >More info 0.02 >More info WT 6h light on whole plant Original data GEO bulk
106 mutant-line774 -0.50 >More info -0.02 >More info WT-control whole plant Original data GEO bulk
107 Shoot submergence 7h -0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
108 axr2-BR -0.54 >More info 0.03 >More info BR BR dark-grown seedlings Original data GEO bulk
109 polysome mRNA eif3k -0.01 >More info -0.50 >More info polysome mRNA WT aerial part Original data GEO bulk
110 axr2 -0.53 >More info 0.03 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
111 Mock pft1 leaf 0.15 >More info -0.65 >More info Mock Col-0 leaf water leaf Original data GEO bulk
112 BI-1-30min IAA 0.50 >More info -0.01 >More info BI-1-0h IAA whole plant Original data GEO bulk
113 Tsu-1 -Fe 48h -0.60 >More info 0.11 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
114 Tsu -Fe 48h Roots -0.60 >More info 0.11 >More info Tsu +Fe 24h Roots Original data GEO bulk
115 Total RNA 35S:AtCSP1-FH1 -0.51 >More info 0.03 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
116 gun1-9 control -0.59 >More info 0.11 >More info Col-0 control Original data GEO bulk
117 chito-tetramer 0.50 >More info -0.04 >More info Col Mock Original data GEO bulk
118 Mutant axr3-1 -0.52 >More info 0.06 >More info Col Original data GEO bulk
119 iron minus 24h 0.50 >More info -0.04 >More info iron +24h root Original data GEO bulk
120 20m.KNO3 0.51 >More info -0.05 >More info To. KNO3 14 day old Roots Original data GEO bulk
121 Heat shock optimum -0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
122 Mutant cry1 0.56 >More info -0.11 >More info Col-0 Original data GEO bulk
123 cry1 low light 0.56 >More info -0.11 >More info Col-O low light Original data GEO bulk
124 shoot hypoxia pRBCS 0.08 >More info -0.52 >More info shoot hypoxia total Original data GEO bulk
125 bri1-116 -0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
126 JMJ24 knockout -0.53 >More info 0.13 >More info WT Original data GEO bulk
127 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.55 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
128 Col0-PsmES4326-24hpi -0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
129 seed germinating in countinuous light 24h SL -0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
130 WT 3H Cold 0.50 >More info -0.14 >More info WT control Original data GEO bulk
131 msg2 -0.51 >More info 0.17 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
132 afb3-1 2h KCl 0.50 >More info -0.18 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
133 Col BTH -0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk
134 ani1 T0.5 -0.25 >More info 0.52 >More info WT T0.5 root tissue Original data GEO bulk
135 Leafminer damaged seedlings -0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
136 12m.KNO3 0.51 >More info -0.30 >More info To. KNO3 14 day old Roots Original data GEO bulk
137 siliques AtHb1 control -0.54 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk