4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root stele pH4.6
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List of experiments correlated with "root stele pH4.6"  Help Download transcriptome of top 30
Score Experiment Correlation from
root stele pH4.6		 Correlation to
root stele pH4.6		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root stele pH4.6 1.00 >More info 1.00 >More info root stele pH5.7 Original data GEO bulk
2 root epidermis and lateral root cap pH4.6 0.80 >More info 0.80 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
3 root endodermis and quiescent center pH4.6 0.77 >More info 0.77 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
4 root cortex pH4.6 0.75 >More info 0.77 >More info root cortex pH5.7 Original data GEO bulk
5 Whole root - low pH 12H 0.73 >More info 0.70 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
6 root cells endodermis 140mM NaCl 48 hours 0.72 >More info 0.63 >More info root cells endodermis standard 1 hour root cells endodermis Original data
7 root cells endodermis 140mM NaCl 3 hours 0.69 >More info 0.65 >More info root cells endodermis standard 1 hour root cells endodermis Original data
8 root cells epidermis 140mM NaCl 48 hours 0.68 >More info 0.64 >More info root cells epidermis standard 1 hour root cells epidermis Original data
9 TNT-seedlings 0.61 >More info 0.71 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
10 root cells endodermis 140mM NaCl 20 hours 0.71 >More info 0.60 >More info root cells endodermis standard 1 hour root cells endodermis Original data
11 root cells stele 140mM NaCl 3 hours 0.64 >More info 0.67 >More info root cells stele standard 1 hour root cells stele Original data
12 root cells endodermis 140mM NaCl 8 hours 0.70 >More info 0.60 >More info root cells endodermis standard 1 hour root cells endodermis Original data
13 root cells endodermis 140mM NaCl 32 hours 0.69 >More info 0.60 >More info root cells endodermis standard 1 hour root cells endodermis Original data
14 root cells epidermis 140mM NaCl 3 hours 0.60 >More info 0.68 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 root longitudinal zone-3 pH 4.6 0.51 >More info 0.76 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
16 Whole root - low pH 24H 0.69 >More info 0.57 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
17 root cells epidermis 140mM NaCl 8 hours 0.61 >More info 0.63 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 root cells endodermis 140mM NaCl 1 hour 0.69 >More info 0.55 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root cells cortex 140mM NaCl 8 hours 0.66 >More info 0.57 >More info root cells cortex standard 1 hour root cells cortex Original data
20 root cells epidermis 140mM NaCl 20 hours 0.62 >More info 0.60 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 Root -Cs 0.65 >More info 0.56 >More info Control-root Original data GEO bulk
22 root cells cortex 140mM NaCl 32 hours 0.65 >More info 0.55 >More info root cells cortex standard 1 hour root cells cortex Original data
23 24h +Pi -0.61 >More info -0.59 >More info 24h -Pi root Original data GEO bulk
24 pericycle auxin 0.60 >More info 0.59 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
25 root cells epidermis 140mM NaCl 32 hours 0.55 >More info 0.64 >More info root cells epidermis standard 1 hour root cells epidermis Original data
26 root columella root cap pH4.6 0.67 >More info 0.51 >More info root columella root cap pH5.7 Original data GEO bulk
27 root Dosed gold 0.65 >More info 0.53 >More info root No gold .125 mM gold 24 h roots Original data
28 root cells cortex 140mM NaCl 20 hours 0.66 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
29 0.125 mM gold 24 h 0.65 >More info 0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
30 root cells cortex 140mM NaCl 1 hour 0.58 >More info 0.59 >More info root cells cortex standard 1 hour root cells cortex Original data
31 root cells cortex 140mM NaCl 48 hours 0.70 >More info 0.47 >More info root cells cortex standard 1 hour root cells cortex Original data
32 Tsu -Fe 24h Roots 0.66 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
33 Tsu-1 -Fe 24h 0.66 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
34 root cells stele 140mM NaCl 8 hours 0.52 >More info 0.64 >More info root cells stele standard 1 hour root cells stele Original data
35 Col-0 low oxygen 0.67 >More info 0.49 >More info Col-0 control low oxygen root Original data GEO bulk
36 columella auxin 0.56 >More info 0.60 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
37 bbx24 in Simulated Shade -0.60 >More info -0.55 >More info WT in simulated shade shade seedling Original data
38 Cocultivation 8 hrs root 0.61 >More info 0.54 >More info Mock cocultivation 8 hrs root Root Original data
39 whole roots -Fe 72 hour 0.63 >More info 0.51 >More info whole roots standard Original data GEO bulk
40 root cells stele 140mM NaCl 48 hours 0.53 >More info 0.61 >More info root cells stele standard 1 hour root cells stele Original data
41 root longitudinal zone-2 pH 4.6 0.50 >More info 0.64 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
42 root cells cortex 140mM NaCl 3 hours 0.64 >More info 0.50 >More info root cells cortex standard 1 hour root cells cortex Original data
43 Fe starvation 72 h 0.63 >More info 0.51 >More info Control Original data GEO bulk
44 root cells stele 140mM NaCl 32 hours 0.49 >More info 0.64 >More info root cells stele standard 1 hour root cells stele Original data
45 SA 0.63 >More info 0.49 >More info WT mock Whole seedling Original data GEO bulk
46 whole roots -Fe 48 hour 0.62 >More info 0.50 >More info whole roots standard Original data GEO bulk
47 root epidermis and lateral root cap -S 0.49 >More info 0.63 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
48 Ba1 UV 0.55 >More info 0.56 >More info Ba1 mock UV seedling Original data
49 epidermis auxin 0.55 >More info 0.56 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
50 8hr-pH4.5 0.51 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
51 root cells stele 140mM NaCl 20 hours 0.51 >More info 0.58 >More info root cells stele standard 1 hour root cells stele Original data
52 root control pSultr2:2 0.56 >More info 0.51 >More info root control total control root Original data GEO bulk
53 R. solani AG8 0.57 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
54 msh1 recA3 untreated 0.47 >More info 0.58 >More info WT untreated above-ground parts Original data GEO bulk
55 root cells epidermis 140mM NaCl 1 hour 0.47 >More info 0.58 >More info root cells epidermis standard 1 hour root cells epidermis Original data
56 root control pWOL 0.48 >More info 0.56 >More info root control total control root Original data GEO bulk
57 ahg2-1sid2-2 0.43 >More info 0.61 >More info WT (Col) control Original data GEO bulk
58 root stele -S 0.48 >More info 0.56 >More info root stele pH5.7 Original data GEO bulk
59 root hypoxia pWOL 0.45 >More info 0.57 >More info root hypoxia total hypoxia root Original data GEO bulk
60 root control pGL2 0.49 >More info 0.52 >More info root control total control root Original data GEO bulk
61 cdpk6-yfp 0.46 >More info 0.55 >More info Kan seedlings Original data GEO bulk
62 Whole root - low pH 3H 0.55 >More info 0.45 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
63 Phytoprostane A1 4 h 0.49 >More info 0.51 >More info Col-0 Original data GEO bulk
64 Whole root - low pH 6H 0.49 >More info 0.51 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
65 phr1 Shoot-Pi 0.57 >More info 0.42 >More info WT Root-Pi shoots Original data GEO bulk
66 OXUPB1-2 meristematic zone 0.52 >More info 0.46 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
67 stele auxin 0.54 >More info 0.44 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
68 toc1-1-85hr 0.36 >More info 0.62 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
69 Shoot -Cs 0.53 >More info 0.44 >More info Control-shoot Original data GEO bulk
70 plant (tga2-5-6) 4h phytoprostane A1 0.46 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
71 seed germinating in countinuous light 24h SL 0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
72 prors1-2 leaves 0.42 >More info 0.55 >More info Col-0 leaves leaves Original data
73 35S::PI ap3-3 35S::AP-GR +DEX 0.56 >More info 0.40 >More info 0hr DEX Original data GEO bulk
74 roots IAA 0.50 >More info 0.46 >More info roots mock Original data GEO bulk
75 afb3-1 2h KNO3 0.43 >More info 0.53 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
76 UV 0.58 >More info 0.37 >More info WT aerial region Original data GEO bulk
77 stele pSHR 0h BL 0.55 >More info 0.39 >More info WR 35S 0h BL brassinosteroid root Original data
78 6h +Pi -0.39 >More info -0.55 >More info 6h -Pi root Original data GEO bulk
79 oas-a1.1 Cd 18h 0.52 >More info 0.41 >More info Cd 18h root Root Original data GEO bulk
80 Heat shock optimum 0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
81 GO5; 8h switch to ambient CO2 concentrations; 0.57 >More info 0.35 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
82 root cells stele 140mM NaCl 1 hour 0.34 >More info 0.58 >More info root cells stele standard 1 hour root cells stele Original data
83 Wounding Stress3 h (root) -0.57 >More info -0.34 >More info Stress mock 3 h (root) Original data Stress treatments
84 Chemically 0.30 >More info 0.61 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
85 AgNO3 3 h 0.37 >More info 0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
86 toc1-1-81hr 0.27 >More info 0.62 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
87 CeO2 germinant -0.25 >More info -0.64 >More info Millipore Water germinant CeO2 seedling Original data
88 Col-0 V. longisporum-inoculated 48 hpi 0.31 >More info 0.58 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
89 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
90 SCR 48hr-S 0.38 >More info 0.50 >More info SCR 0hr endodermis Original data
91 SCR 72hr-S 0.35 >More info 0.52 >More info SCR 0hr endodermis Original data
92 Shoot apex inflorescence (after bolting) 0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
93 SCR 24hr-S 0.35 >More info 0.51 >More info SCR 0hr endodermis Original data
94 toc1-1-73hr 0.34 >More info 0.51 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
95 SCR 96hr-S 0.31 >More info 0.54 >More info SCR 0hr endodermis Original data
96 whole roots -Fe 6 hour 0.33 >More info 0.51 >More info whole roots standard Original data GEO bulk
97 red illumination +lincomycin 0.23 >More info 0.61 >More info red illumination -lincomycin Original data GEO bulk
98 root cap pGL2(QC pSCRBRI1) 0h BL 0.59 >More info 0.24 >More info WR 35S 0h BL brassinosteroid root Original data
99 9m.KCl 0.56 >More info 0.26 >More info To. KCl 14 day old Roots Original data GEO bulk
100 Col0 roots 2hr KNO3 nitrogen -0.24 >More info -0.58 >More info Col0 roots 2hr KCl control root Original data GEO bulk
101 Dark 4 h pls UV-AB 5min 0.51 >More info 0.30 >More info Dark 4 h Original data Light treatments
102 Whole root - low pH 1H 0.15 >More info 0.66 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
103 Oxidative Stress 3 h (root) -0.50 >More info -0.29 >More info Stress mock 3 h (root) Original data Stress treatments
104 SCL3 OE -0.52 >More info -0.27 >More info Col-0 whole root Original data GEO bulk
105 COL-0-Fe--root 0.60 >More info 0.19 >More info COL-0-Ctrl--root root Original data
106 QC pSCR(QC pSCRBRI1) 0h BL 0.61 >More info 0.18 >More info WR 35S 0h BL brassinosteroid root Original data
107 shoots bhlh100/101 0uM Fe 0.54 >More info 0.23 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
108 SHR-GR Time 12H Dex 0.52 >More info 0.24 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
109 QC pSCR 0h BL 0.56 >More info 0.19 >More info WR 35S 0h BL brassinosteroid root Original data
110 Leafminer damaged seedlings 0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
111 toc1-1-53hr 0.23 >More info 0.50 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
112 roottip hypoxia total 0.18 >More info 0.53 >More info roottip control total Original data GEO bulk
113 Cs root -0.17 >More info -0.53 >More info control root Original data GEO bulk
114 Mutant axr3-1 (IAA) 0.11 >More info 0.59 >More info Col (IAA) Original data GEO bulk
115 siliques AtHb1 control 0.17 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
116 essp4/sdg8-5 mutant 0.55 >More info 0.13 >More info wild type leaf Original data GEO bulk
117 Inflorescences Trp1 0.16 >More info 0.52 >More info Inflorescences ler inflorescences Original data GEO bulk
118 Laer pretreat GA Flg22 1h -0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
119 Col0-PsmES4326-24hpi 0.05 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
120 bri1-116 -0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
121 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
122 2h KNO3 Whole root 0.06 >More info -0.57 >More info 2h KCl control Whole root Whole root Original data GEO bulk
123 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data