4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on gh3.5D uninoculated
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List of experiments correlated with "gh3.5D uninoculated"  Help Download transcriptome of top 30
Score Experiment Correlation from
gh3.5D uninoculated		 Correlation to
gh3.5D uninoculated		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 gh3.5D uninoculated 1.00 >More info 1.00 >More info Col-0 48 hpi Original data GEO bulk
2 Col-0 48 hpi -0.85 >More info -0.84 >More info Col-0 uninoculated Original data GEO bulk
3 Mutant gh3.5-1D 0.77 >More info 0.84 >More info Col-0 Original data GEO bulk
4 sni1 -0.73 >More info -0.81 >More info WT Original data GEO bulk
5 del1-1 mutant 5d uninfected -0.72 >More info -0.80 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
6 S58-2 -0.75 >More info -0.77 >More info wt Original data GEO bulk
7 S15-118 -0.75 >More info -0.77 >More info wt Original data GEO bulk
8 SA 4mM -0.71 >More info -0.80 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
9 vtc2 (I) -0.74 >More info -0.76 >More info Col (I) rosette Original data GEO bulk
10 UV Stress 24 h (shoot) -0.71 >More info -0.79 >More info Stress mock 24 h (shoot) Original data Stress treatments
11 cpr5 -0.72 >More info -0.77 >More info WT(COL) Original data GEO bulk
12 camta3-2 -0.66 >More info -0.82 >More info WT Original data GEO bulk
13 cpr5npr1 -0.74 >More info -0.74 >More info WT(COL) Original data GEO bulk
14 Elevated CO2 AMPLE N DAY -0.77 >More info -0.71 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
15 edr1 18 h powdery mildew -0.71 >More info -0.77 >More info Col-0 18 h powdery mildew Original data GEO bulk
16 cpr5scv1 -0.72 >More info -0.75 >More info WT(COL) Original data GEO bulk
17 ceh1 mutant -0.70 >More info -0.77 >More info Parent line Original data
18 aba3-1 -0.72 >More info -0.72 >More info wt Original data GEO bulk
19 Col whole leaf 7dpi -0.71 >More info -0.73 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
20 abi4 vtc2 (I) -0.71 >More info -0.72 >More info Col (I) rosette Original data GEO bulk
21 cpr5 -0.72 >More info -0.70 >More info WT seedling Original data GEO bulk
22 cpr5npr1svi1 -0.66 >More info -0.75 >More info WT(COL) Original data GEO bulk
23 cs26 long day -0.70 >More info -0.71 >More info Leaves-WT-LD leaf Original data GEO bulk
24 CMV-WT -0.70 >More info -0.70 >More info Mock-At Aerial tissues Original data GEO bulk
25 Col ozone 2d -0.70 >More info -0.70 >More info Col clean-air 2d ozone Original data GEO bulk
26 IMI 4mM -0.71 >More info -0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
27 CLO 4mM -0.72 >More info -0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
28 smg7b-1 -0.72 >More info -0.67 >More info WT whole plant Original data GEO bulk
29 pvip1 pvip2 -0.72 >More info -0.67 >More info Col-0 whole rosettes Original data GEO bulk
30 Col whole leaf 5dpi -0.68 >More info -0.71 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
31 Col-0 INA 48h -0.63 >More info -0.75 >More info Col-0 MOCK 48h Original data GEO bulk
32 camta1/3 warm -0.64 >More info -0.74 >More info WT warm entire aerial part Original data GEO bulk
33 Col-0 INA 6d -0.66 >More info -0.72 >More info Col-0 MOCK 6d Original data GEO bulk
34 sid2-1 cold 0.63 >More info 0.75 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
35 S14-150 -0.66 >More info -0.71 >More info wt Original data GEO bulk
36 cs26 short-day 0.66 >More info 0.71 >More info Leaves-WT-SD leaf Original data GEO bulk
37 bio4-1 mutant leaves -0.66 >More info -0.71 >More info WT leaves leaves Original data GEO bulk
38 mkk1/mkk2 control rep -0.71 >More info -0.66 >More info Col-0 Time 0 rep Original data GEO bulk
39 Cor hrpS 10h -0.65 >More info -0.71 >More info Mock 10h Cor hrpS Original data GEO bulk
40 edr1 36 h powdery mildew -0.69 >More info -0.67 >More info Col-0 36 h powdery mildew Original data GEO bulk
41 RPL18 TuMV inoculated total RNA -0.69 >More info -0.66 >More info mock inoculated total RNA PO Original data GEO bulk
42 bHLH122 ox 0.64 >More info 0.71 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
43 WT powdery mildew -0.66 >More info -0.69 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
44 Elevated CO2 AMPLE N NIGHT -0.66 >More info -0.68 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
45 pmr5 pmr6 -0.71 >More info -0.63 >More info Col-0 Original data GEO bulk
46 eds16 whole leaf 5dpi 0.62 >More info 0.72 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
47 A. thaliana-A. lyrata hybrid 0.65 >More info 0.69 >More info A. thaliana mature leaves before flowering Original data GEO bulk
48 gh3.5-1D 48 hpi -0.71 >More info -0.62 >More info Col-0 uninoculated Original data GEO bulk
49 Col whole leaf amplified 5 dpi -0.66 >More info -0.66 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
50 SLWF infested -0.73 >More info -0.59 >More info SLWF uninfested rosette tissue Original data GEO bulk
51 abi4-102 (II) -0.68 >More info -0.63 >More info Col (II) rosette Original data GEO bulk
52 bio4-1 mutant watered00µM biotin leaves 0.66 >More info 0.64 >More info bio4-1 mutant leaves leaves Original data GEO bulk
53 RPL18 TuMV inoculated polysomal RNA -0.69 >More info -0.61 >More info mock inoculated polysomal RNA PO Original data GEO bulk
54 abi4-102 (I) -0.67 >More info -0.61 >More info Col (I) rosette Original data GEO bulk
55 sid2 0.63 >More info 0.65 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
56 edr1 0 h powdery mildew -0.64 >More info -0.63 >More info Col-0 0 h powdery mildew Original data GEO bulk
57 Shoot -K -0.62 >More info -0.65 >More info Control-shoot Original data GEO bulk
58 GST 4 h (leaf) -0.56 >More info -0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
59 K starvation (shoot) -0.62 >More info -0.65 >More info Ws (shoot) Original data GEO bulk
60 ein2-1 9 hpi A. brassicicola -0.61 >More info -0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 Mutant siz1-3 -0.63 >More info -0.63 >More info Col-0 Original data GEO bulk
62 35S:RPS4 eds1-2 24h 0.67 >More info 0.59 >More info 35S:RPS4 24h leaves Original data
63 siz1-3 control -0.63 >More info -0.63 >More info Col-0 control Original data GEO bulk
64 vtc1 (II) -0.67 >More info -0.59 >More info Col (II) rosette Original data GEO bulk
65 Col-0 9 hpi A. brassicicola -0.57 >More info -0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
66 GST NPP1 4 h (leaf) -0.59 >More info -0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 CAX1/CAX3 mutant -0.58 >More info -0.66 >More info Col whole plant Original data GEO bulk
68 eds16 whole leaf 0h UI 0.50 >More info 0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
69 myb3 myb3r4d -0.63 >More info -0.61 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
70 12h-DC3000 avrRpm1 -0.54 >More info -0.69 >More info 12h-DC3000 leaves Original data GEO bulk
71 agb1 gpa1 -ABA LF -0.50 >More info -0.73 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
72 camta1/2/3 warm -0.64 >More info -0.59 >More info WT warm entire aerial part Original data GEO bulk
73 ERF96OE -0.55 >More info -0.68 >More info WT leaf Original data
74 des1.1 -0.59 >More info -0.63 >More info Leaves-WT leaf Original data GEO bulk
75 agb1 -ABA LF -0.47 >More info -0.75 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
76 camta2/3 warm -0.60 >More info -0.61 >More info WT warm entire aerial part Original data GEO bulk
77 cat2-hCO2 0.70 >More info 0.51 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
78 Col whole leaf 5 dpi -0.60 >More info -0.61 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
79 Flagellin 4 h (leaf) -0.58 >More info -0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
80 seedlings-week-old RECA1-overexpressing
transgenic		 -0.65 >More info -0.56 >More info seedlings-week-old Col-0 seedlings Original data
81 Elevated CO2 fully expanded leaf -0.67 >More info -0.53 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
82 apk1 apk2 -0.65 >More info -0.55 >More info Col0-control whole rosette Original data GEO bulk
83 upf3 -0.66 >More info -0.54 >More info WT whole plant Original data GEO bulk
84 WT +elf18 10h -0.60 >More info -0.60 >More info WT untreated elf18 Original data GEO bulk
85 OE WRKY63.3 high light -0.61 >More info -0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
86 20d after anthesis -0.61 >More info -0.58 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
87 LTN008-2 aza-dc -0.71 >More info -0.48 >More info LTN012-2 Mock Original data
88 pmr5 -0.62 >More info -0.57 >More info Col-0 Original data GEO bulk
89 ataf1-1 mutant Col-0 Bgh inoculated -0.63 >More info -0.56 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
90 GO5; 0h switch to ambient CO2 concentrations; 0.68 >More info 0.50 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
91 atgsnor1-1 0.63 >More info 0.55 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
92 ice1 6H Cold -0.61 >More info -0.57 >More info WT 6H Cold Original data GEO bulk
93 agb1 +ABA LF 0.52 >More info 0.64 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
94 OH1 -0.62 >More info -0.54 >More info Col-0 leaves Original data GEO bulk
95 B.cinerea 18 h infection -0.56 >More info -0.60 >More info Mock 18 h Original data Botrytis cinerea infection
96 Botrytis cinerea 18h -0.56 >More info -0.60 >More info control 18h Original data GEO bulk
97 rosette leaves fdh -0.59 >More info -0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
98 E.orontii Infection 3 day -0.50 >More info -0.65 >More info Uninfection 3 day Original data Elicitor treatments
99 lht1 PstDC3000 48h -0.65 >More info -0.50 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
100 Octopus overexpressor 35SDYG25 -0.57 >More info -0.58 >More info WS Original data GEO bulk
101 WT 2-4h Xanthomonas -0.53 >More info -0.61 >More info WT T0 Original data GEO bulk
102 efr-1 +elf18 10h 0.58 >More info 0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
103 D2O -0.58 >More info -0.56 >More info H2O seedling Original data GEO bulk
104 pmr4-1 powdery mildew -0.61 >More info -0.53 >More info WT powdery mildew uninoculated Original data GEO bulk
105 msh1 albino -0.50 >More info -0.63 >More info WT aerial part Original data GEO bulk
106 Mutant siz1-3 (Drought) -0.59 >More info -0.54 >More info Col-0 (Drought) Original data GEO bulk
107 camta1/2/3 24h cold -0.56 >More info -0.57 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
108 IRP1-OE-Fe--shoot -0.63 >More info -0.50 >More info COL-0-Fe--shoot shoot Original data
109 Col laser microdissected 5 dpi -0.56 >More info -0.57 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
110 +1.6 mM Tween 20 1 h. -0.51 >More info -0.62 >More info +distilled water 1 h. Original data GEO bulk
111 dense canopy -0.51 >More info -0.62 >More info single (control) petiole Original data GEO bulk
112 siz1-3 drought -0.59 >More info -0.54 >More info Col-0 drought Original data GEO bulk
113 gpa1 -ABA LF -0.48 >More info -0.65 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
114 camta3-1 -0.59 >More info -0.53 >More info WT Original data GEO bulk
115 WT-SA -0.59 >More info -0.53 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
116 35S::ERF104 Flg22 4h -0.56 >More info -0.56 >More info 35S::ERF104 H2O 4h Original data GEO bulk
117 35S:RPS4 eds1-2 8h 0.57 >More info 0.55 >More info 35S:RPS4 8h leaves Original data
118 PAHs stress -0.60 >More info -0.52 >More info exp control phenanthrene whole plants Original data GEO bulk
119 rsa3-1 Na 24h -0.45 >More info -0.67 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
120 treated group -0.37 >More info -0.75 >More info Control group Original data
121 WT cold -0.55 >More info -0.56 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
122 Elevated CO2 expanding leaf -0.68 >More info -0.43 >More info Ambient CO2 expanding leaf expanding leaf Original data
123 pepr1-1 Pepr2-3 +Pep2 2h 0.54 >More info 0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
124 BLM+INA -0.61 >More info -0.50 >More info CK BLM and INA seedling Original data
125 low CO2 + light -0.49 >More info -0.62 >More info normal CO2 + light Original data GEO bulk
126 ice1 24H Cold -0.56 >More info -0.54 >More info WT 24H Cold Original data GEO bulk
127 8h-DC3000 avrRpm1 -0.58 >More info -0.52 >More info 8h-DC3000 leaves Original data GEO bulk
128 HopZ1a treated -0.57 >More info -0.53 >More info col Original data GEO bulk
129 rcf1-1 cold 24h -0.40 >More info -0.70 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
130 col-5 hrpA 12h -0.47 >More info -0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
131 downy mildew cotyledons late stage -0.63 >More info -0.46 >More info mock inoculated Cotyledons Original data GEO bulk
132 Lipopolysaccaride4 h (leaf) -0.53 >More info -0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
133 dark +H2O2 0.44 >More info 0.65 >More info dark 5 mM H2O2 seedling Original data GEO bulk
134 ice1 control -0.60 >More info -0.49 >More info WT control Original data GEO bulk
135 wavy -0.52 >More info -0.57 >More info WT Original data GEO bulk
136 lht1 untreated -0.60 >More info -0.49 >More info WT untreated untreated leaf Original data GEO bulk
137 mpk6-ko Flg22 4h -0.52 >More info -0.57 >More info mpk6-ko H2O 4h Original data GEO bulk
138 penta Alternaria 3dpi -0.60 >More info -0.49 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
139 flu -0.49 >More info -0.60 >More info WT Col Original data GEO bulk
140 smg5-2 -0.64 >More info -0.44 >More info WT whole plant Original data GEO bulk
141 Cor 24h -0.50 >More info -0.58 >More info Mock 24h Cor Original data GEO bulk
142 flu over-tAPX -0.46 >More info -0.62 >More info WT Col Original data GEO bulk
143 pepr1-1 Pepr2-3 +Pep2 10h 0.61 >More info 0.46 >More info WT +Pep2 10h Pep2 Original data GEO bulk
144 anac017-2 AntimycinA 3h 0.54 >More info 0.53 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
145 vte2-1 3d vernalization -0.53 >More info -0.54 >More info WT 3d vernalization Original data GEO bulk
146 eds16 whole leaf 6hpi 0.49 >More info 0.58 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
147 total mRNA eif3k -0.51 >More info -0.55 >More info total mRNA WT aerial part Original data GEO bulk
148 hrcC -0.51 >More info -0.55 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
149 HopZ1a treated ulp1c ulp1d -0.56 >More info -0.50 >More info col Original data GEO bulk
150 erf104-ko Flg22 4h -0.50 >More info -0.56 >More info erf104-ko H2O 4h Original data GEO bulk
151 mkk1/mkk2 24h BTH rep -0.56 >More info -0.50 >More info Col-0 24h BTH rep Original data GEO bulk
152 WT AntimycinA 3h -0.51 >More info -0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
153 atmospheric CO2 low Mg shoot -0.60 >More info -0.46 >More info atmospheric CO2 normal Mg shoot Shoot Original data
154 irradiated leaf (cmt 1d) -0.67 >More info -0.38 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
155 eds16 whole leaf 7d UI 0.52 >More info 0.53 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
156 aerial organ callus inducing medium 96 h -0.53 >More info -0.52 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
157 Phaseolicola 2 h (leaf) -0.45 >More info -0.60 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
158 vtc2 mature somatic embryo -0.42 >More info -0.63 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
159 Leafminer locally damaged thaliana seedlings -0.58 >More info -0.47 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
160 bZIP1ko mutant N+Light- -0.58 >More info -0.47 >More info WT-sib N+Light- whole plant Original data GEO bulk
161 AvrRpm1 2 h (leaf) -0.48 >More info -0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
162 irradiated leaf (WT 1d) -0.63 >More info -0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
163 anac017-1 H2O2 3h 0.50 >More info 0.54 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
164 4d red light grown hmr-5 seedlings -0.56 >More info -0.48 >More info 4d red light grown WT(Col-0) seedlings Original data
165 leaf chr11-1chr17-1 -0.59 >More info -0.45 >More info leaf Col-0 leaves Original data GEO bulk
166 eds16 whole leaf 7dpi 0.49 >More info 0.55 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
167 shoot control p35S -0.39 >More info -0.65 >More info shoot control total Original data GEO bulk
168 arp6-10 12 ºC 0.43 >More info 0.61 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
169 pad4-PsmES4326-24hpi 0.57 >More info 0.46 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
170 Pto inoculated -0.54 >More info -0.49 >More info col Original data GEO bulk
171 aerial organ callus inducing medium 48 h -0.52 >More info -0.51 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
172 CMP 24hr -0.57 >More info -0.46 >More info Acetone 24hr root Original data GEO bulk
173 mbd11 mutant thaliana 10-day-old seedling -0.47 >More info -0.56 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
174 mbd6 mutant thaliana 10-day-old seedling -0.50 >More info -0.52 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
175 ataf1-1 mutant Col-0 Un-inoculated 0.61 >More info 0.41 >More info WT Col-0 Un-inoculated Original data GEO bulk
176 bak1-3 +Pep2 10h -0.50 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
177 pmr4-1 control -0.51 >More info -0.51 >More info WT control uninoculated Original data GEO bulk
178 pho1 -0.55 >More info -0.46 >More info Col2WT Original data GEO bulk
179 tunicamycin 0.50 >More info 0.51 >More info DMF Original data GEO bulk
180 pnp1-1 1wk +P -0.56 >More info -0.45 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
181 shoot hypoxia p35S -0.43 >More info -0.58 >More info shoot hypoxia total Original data GEO bulk
182 WT +elf18 2h -0.48 >More info -0.53 >More info WT untreated elf18 Original data GEO bulk
183 npr1-1 SA 0.51 >More info 0.49 >More info Col-0 SA complete seedling Original data
184 wrky33 Bc inoculation 14h -0.62 >More info -0.38 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
185 upf1 -0.63 >More info -0.37 >More info WT whole plant Original data GEO bulk
186 WT in -N -0.53 >More info -0.47 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
187 P.syringae AvrRpt2 4 h (leaf) -0.60 >More info -0.40 >More info Mock 4 h (leaf) Original data Elicitor treatments
188 oas-a1.1 Cd 18h -0.39 >More info -0.61 >More info Cd 18h root Root Original data GEO bulk
189 A6 mutant -0.46 >More info -0.54 >More info WT rosette leaves Rosette leaves Original data GEO bulk
190 del1-1 5dpi -0.67 >More info -0.32 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
191 ago4-1 -0.58 >More info -0.41 >More info WT La-er whole plants Original data GEO bulk
192 gpa1 +ABA LF 0.34 >More info 0.65 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
193 Constans-mutant -0.54 >More info -0.44 >More info Col control above-ground whole plant Original data GEO bulk
194 ice1 3H Cold -0.58 >More info -0.40 >More info WT 3H Cold Original data GEO bulk
195 overexpresser LBD38 in -N 0.56 >More info 0.42 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
196 DFPM -0.51 >More info -0.47 >More info control Original data GEO bulk
197 WT +Pep2 10h -0.52 >More info -0.46 >More info WT untreated Pep2 Original data GEO bulk
198 Col-Luc WT 3h antimycin A -0.52 >More info -0.46 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
199 Mutant arf2-6 0.47 >More info 0.51 >More info Col Original data GEO bulk
200 WT NAA/flg 2h -0.48 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
201 bri1-116 0.25 >More info 0.73 >More info Col seedling Original data GEO bulk
202 Nicotinamide-53hr -0.51 >More info -0.46 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
203 csn5 (csn5a-2 csn5b) light -0.58 >More info -0.39 >More info WT light Original data GEO bulk
204 Sulfometuron EC50 -0.51 >More info -0.46 >More info Carrier Original data GEO bulk
205 ulp1c ulp1d -0.37 >More info -0.60 >More info col Original data GEO bulk
206 AtMYB30-as 90-105 min Xanthomonas -0.37 >More info -0.60 >More info WT 90-105 min Xanthomonas Original data GEO bulk
207 Time-0 chr11-1chr17-1 0.47 >More info 0.50 >More info Time-0 Col-0 leaf explants Original data
208 WT-NOCO2 INFECTED -0.59 >More info -0.37 >More info WT-MOCK Original data GEO bulk
209 Tsu -Fe 24h Shoots -0.59 >More info -0.37 >More info Tsu +Fe 24h Shoots Original data GEO bulk
210 IRP1-OE-Ctrl--shoot -0.57 >More info -0.39 >More info COL-0-Ctrl--shoot shoot Original data
211 AgNO3 3 h -0.45 >More info -0.51 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
212 WT 3h -P -0.42 >More info -0.54 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
213 shoots bhlh100/101 0uM Fe -0.55 >More info -0.40 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
214 WT leaves - Fe -0.54 >More info -0.41 >More info WT leaves + Fe Leaves Original data GEO bulk
215 nas4x leaves + Fe -0.53 >More info -0.42 >More info WT leaves + Fe Leaves Original data GEO bulk
216 agb1 gpa1 +ABA LF 0.37 >More info 0.58 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
217 Col ozone 3h -0.38 >More info -0.57 >More info Col clean-air 3h ozone Original data GEO bulk
218 WT Bc inoculation 14h -0.56 >More info -0.38 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
219 GST-overexpression seedlings control -0.55 >More info -0.39 >More info WT seedlings control Seedlings Original data
220 dde2-2 9 hpi A. brassicicola -0.38 >More info -0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
221 leaf blade in D -0.42 >More info -0.52 >More info leaf blade in WL leaf blades Original data GEO bulk
222 phyB mutant 22C 10hrs 0.36 >More info 0.58 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
223 toc1-1-49hr -0.41 >More info -0.53 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
224 nas4x leaves - Fe 0.41 >More info 0.53 >More info WT leaves - Fe Leaves Original data GEO bulk
225 root epidermis and lateral root cap -S 0.42 >More info 0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
226 E.coli TUV86 2 fliC 7h -0.43 >More info -0.51 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
227 cov1 cov2 stem Base -0.54 >More info -0.39 >More info WT stem Base stem Base Original data GEO bulk
228 Mature callus -0.55 >More info -0.38 >More info Young callus hypocotyls Original data GEO bulk
229 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.68 >More info 0.25 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
230 Shoot apex inflorescence (after bolting) 0.28 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
231 abh1 -ABA -0.60 >More info -0.33 >More info Col-0 -ABA Original data GEO bulk
232 coi1-16 ein2 sid2 ctrl 0.58 >More info 0.35 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
233 Laer MeJA 1h 0.50 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
234 petiole in D -0.42 >More info -0.51 >More info petiole in WL petioles Original data GEO bulk
235 Col-0 2HS -0.30 >More info -0.63 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
236 DC3000 2 h (leaf) -0.38 >More info -0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
237 Col-0 +ABA LF -0.37 >More info -0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
238 35:SUB1C -0.50 >More info -0.42 >More info WT whole seedling Original data GEO bulk
239 ORS1 induced -0.58 >More info -0.34 >More info mock-induced rosette leaves Original data GEO bulk
240 Light 3day wt 0.50 >More info 0.42 >More info 0h wt Original data
241 miR393 0h 0.18 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
242 sfr6 drought 0.42 >More info 0.50 >More info WT drought All aerial tissue Original data GEO bulk
243 oxt6:AtCPSF30 line 0.33 >More info 0.59 >More info oxt6 mutant Original data GEO bulk
244 M6PR transgenic 0mM NaCl -0.52 >More info -0.39 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
245 Col-0 mbs1-1 HL 3h 0.56 >More info 0.35 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
246 Shoot -Cs -0.58 >More info -0.33 >More info Control-shoot Original data GEO bulk
247 Te ozone -0.58 >More info -0.33 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
248 Got7 UV -0.32 >More info -0.59 >More info Got7 mock UV seedling Original data
249 arf2 brz 0.52 >More info 0.38 >More info arf2 mock Original data GEO bulk
250 INA -0.40 >More info -0.50 >More info CK INA seedling Original data
251 Col-0 DCA 48h -0.33 >More info -0.56 >More info Col-0 MOCK 48h Original data GEO bulk
252 rpl24 total -0.51 >More info -0.38 >More info WT total seedling shoot/aerial seedling Original data
253 Col leaves 48h LT -0.52 >More info -0.37 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
254 Tsu -Fe 48h Shoots -0.52 >More info -0.37 >More info Tsu +Fe 24h Shoots Original data GEO bulk
255 35SAvr -0.38 >More info -0.51 >More info Ecotype Col Original data GEO bulk
256 ubc13A-es 0.38 >More info 0.51 >More info Col-es root Original data GEO bulk
257 rcf1-1 cold 12h -0.39 >More info -0.50 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
258 eds16 whole leaf 3dpi 0.50 >More info 0.38 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
259 UV -0.62 >More info -0.26 >More info WT aerial region Original data GEO bulk
260 gun1gun5 far-red pretreated 0.38 >More info 0.50 >More info WT far-red pretreated Original data GEO bulk
261 col-5 hrpA 2h -0.35 >More info -0.53 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
262 atmospheric CO2 high Mg shoot -0.54 >More info -0.33 >More info atmospheric CO2 normal Mg shoot Shoot Original data
263 col-5 DC3000 12h -0.34 >More info -0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
264 CT101 ozone -0.52 >More info -0.35 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
265 rpoTmp(line) MLD stressed -0.50 >More info -0.37 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
266 dor control -0.51 >More info -0.36 >More info WT control Original data GEO bulk
267 AvrRpt2 Col-0 6hpi -0.55 >More info -0.31 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
268 35:SUB1A -0.50 >More info -0.36 >More info WT whole seedling Original data GEO bulk
269 csn3-1 light -0.53 >More info -0.32 >More info WT light Original data GEO bulk
270 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.54 >More info -0.31 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
271 SAM SE agl15 agl18 double mutant -0.29 >More info -0.56 >More info SAM SE Col Original data GEO bulk
272 seed germinating in countinuous light 24h SL 0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
273 WT-elf18 -0.33 >More info -0.52 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
274 ex1ex2flu dark 8hours/30 minute light 0.63 >More info 0.22 >More info col dark 8hours/30 minute light Original data GEO bulk
275 pnp1-1 3h +P -0.50 >More info -0.35 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
276 rpl24 polysome -0.50 >More info -0.35 >More info WT polysome seedling shoot/aerial seedling Original data
277 G3P -0.57 >More info -0.28 >More info Mock distal leaves Original data GEO bulk
278 Col-0 under 4 days salt -0.51 >More info -0.33 >More info Col-0 under control 4 days salt treatment rosette Original data
279 Myzus persicae saliva -0.53 >More info -0.31 >More info Control Original data GEO bulk
280 aphid saliva treated -0.53 >More info -0.31 >More info control aphid saliva treated leaves Original data GEO bulk
281 coi1-16 ein2 sid2 ozone -0.60 >More info -0.24 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
282 JMJ24 knockout -0.52 >More info -0.31 >More info WT Original data GEO bulk
283 C24 UV1 0.62 >More info 0.21 >More info C24 mock UV seedling Original data
284 atmyc2 Seedling BL 0.26 >More info 0.57 >More info WT Seedling BL Original data GEO bulk
285 FOX line K16331 -0.50 >More info -0.32 >More info empty vector control (T3) FOX lines Original data GEO bulk
286 albino Ds13-2198-1 0.57 >More info 0.25 >More info control Original data GEO bulk
287 Ba1 UV -0.21 >More info -0.61 >More info Ba1 mock UV seedling Original data
288 Osmotic Stress 24 h (shoot) -0.54 >More info -0.27 >More info Stress mock 24 h (shoot) Original data Stress treatments
289 col-5 DC3000 4h -0.19 >More info -0.62 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
290 col-5 hrpA 4h -0.21 >More info -0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
291 seedlings +5AC -0.50 >More info -0.29 >More info control seedlings 10-day old whole seedling Original data GEO bulk
292 psae1-3 stn7-1 -0.54 >More info -0.25 >More info WS rosette leaves Original data GEO bulk
293 Atwrky63 0.52 >More info 0.26 >More info Col0 none leaf Original data GEO bulk
294 csn4-1 dark -0.50 >More info -0.28 >More info WT light Original data GEO bulk
295 npr1 sni1 ssn2 0.51 >More info 0.26 >More info npr1 sni1 water water seedling Original data GEO bulk
296 Col-0 ozone -0.52 >More info -0.25 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
297 roottip control pSCR 0.21 >More info 0.56 >More info roottip control total control roottip Original data GEO bulk
298 tbf1-mock spray -0.26 >More info -0.51 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
299 WT roots - Fe -0.50 >More info -0.26 >More info WT roots + Fe Roots Original data GEO bulk
300 eds16 whole leaf 1dpi 0.22 >More info 0.54 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
301 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.52 >More info -0.23 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
302 scrm-D -0.50 >More info -0.25 >More info Col-0 WT whole seedling Original data GEO bulk
303 DC3000 24h -0.50 >More info -0.24 >More info Mock 24h DC3000 Original data GEO bulk
304 ANOXIA 0.24 >More info 0.50 >More info ANOXIA+SUCROSE Original data GEO bulk
305 P. infestans 6 h (leaf) -0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
306 Col PSTDC3000 24h -0.60 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
307 WT drought -0.22 >More info -0.50 >More info WT control All aerial tissue Original data GEO bulk
308 Mutant cry1 (High Light) 0.52 >More info 0.19 >More info Col-0 (High Light) Original data GEO bulk
309 des1 water -0.52 >More info -0.19 >More info WT water water leaf Original data GEO bulk
310 cry1 high light 0.52 >More info 0.19 >More info Col-O high light Original data GEO bulk
311 AtMYB30-ox 2-4h Xanthomonas -0.52 >More info -0.18 >More info WT 2-4h Xanthomonas Original data GEO bulk
312 35S:VND7-VP16-GR+CHX -0.18 >More info -0.51 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
313 col-5 DC3000-avrRpm 4h -0.19 >More info -0.50 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
314 OE WRKY40.4 0.51 >More info 0.17 >More info OE WRKY40.4 none leaf Original data GEO bulk
315 EBE-XVE +estradiol 0.04 >More info 0.63 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
316 AAF-OX -0.57 >More info -0.10 >More info Col-0 Rosette leaf Original data GEO bulk
317 C24 ozone -0.50 >More info -0.16 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
318 met1-3 second-selfed generation -0.11 >More info -0.55 >More info Col WT leaf Original data GEO bulk
319 calcicole ecotype Cal-0 -0.52 >More info -0.12 >More info Col-4 1 mM CaCl2 Original data GEO bulk
320 t-zeatin 0.5 h 0.12 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
321 pvip1 pvip2 seedling -0.61 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
322 phosphate-starved -0.08 >More info -0.55 >More info control shoot tissue Original data GEO bulk
323 HairpinZ 4 h (leaf) -0.59 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
324 Imbibed 1 h (seed) -0.11 >More info -0.51 >More info Dry seed Original data Time course of early seed germination
325 IAA 0.5 h -0.05 >More info -0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
326 CMV-A2b mutant -0.53 >More info -0.03 >More info Mock-At Aerial tissues Original data GEO bulk
327 vte2 leaves 120h LT -0.57 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
328 SA Treated -0.60 >More info 0.08 >More info Water Original data GEO bulk
329 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
330 ABA 1 h -0.02 >More info 0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
331 0h hml -0.54 >More info 0.07 >More info 0h wt Original data
332 IAA7mII over-expressor IAA Treated -0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
333 root - 04% oxygen - 2h 0.17 >More info -0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
334 rdr6-15 -0.14 >More info 0.54 >More info Col-0 plant inflorescence Original data
335 Laer pretreat GA Flg22 1h -0.36 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
336 siliques AtHb1 control -0.17 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
337 Mh0 UV 0.53 >More info -0.19 >More info Mh0 mock UV seedling Original data
338 Heat shock optimum -0.47 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
339 WT +Pep2 2h -0.52 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
340 Light 3day hml 0.51 >More info -0.41 >More info 0h hml Original data
341 Col0-PsmES4326-24hpi -0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
342 Col BTH -0.70 >More info 0.67 >More info Col rosettes Original data GEO bulk
343 Leafminer damaged seedlings -0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk