4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells cortex 140mM NaCl 20 hours
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List of experiments correlated with "root cells cortex 140mM NaCl 20 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells cortex 140mM NaCl 20 hours		 Correlation to
root cells cortex 140mM NaCl 20 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells cortex 140mM NaCl 20 hours 1.00 >More info 1.00 >More info root cells cortex standard 1 hour root cells cortex Original data
2 root cells cortex 140mM NaCl 48 hours 0.92 >More info 0.89 >More info root cells cortex standard 1 hour root cells cortex Original data
3 root cells cortex 140mM NaCl 32 hours 0.88 >More info 0.91 >More info root cells cortex standard 1 hour root cells cortex Original data
4 root cells cortex 140mM NaCl 8 hours 0.90 >More info 0.86 >More info root cells cortex standard 1 hour root cells cortex Original data
5 root cells stele 140mM NaCl 32 hours 0.80 >More info 0.84 >More info root cells stele standard 1 hour root cells stele Original data
6 root cells stele 140mM NaCl 20 hours 0.77 >More info 0.85 >More info root cells stele standard 1 hour root cells stele Original data
7 root cells stele 140mM NaCl 48 hours 0.78 >More info 0.84 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells endodermis 140mM NaCl 32 hours 0.80 >More info 0.81 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root cells cortex 140mM NaCl 3 hours 0.82 >More info 0.79 >More info root cells cortex standard 1 hour root cells cortex Original data
10 root cells epidermis 140mM NaCl 48 hours 0.77 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
11 root cells endodermis 140mM NaCl 20 hours 0.80 >More info 0.80 >More info root cells endodermis standard 1 hour root cells endodermis Original data
12 root cells endodermis 140mM NaCl 48 hours 0.81 >More info 0.79 >More info root cells endodermis standard 1 hour root cells endodermis Original data
13 root cells epidermis 140mM NaCl 20 hours 0.76 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
14 root cells cortex 140mM NaCl 1 hour 0.78 >More info 0.80 >More info root cells cortex standard 1 hour root cells cortex Original data
15 root cells endodermis 140mM NaCl 8 hours 0.79 >More info 0.76 >More info root cells endodermis standard 1 hour root cells endodermis Original data
16 root cells epidermis 140mM NaCl 32 hours 0.72 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
17 root cells stele 140mM NaCl 8 hours 0.75 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
18 root cells endodermis 140mM NaCl 3 hours 0.81 >More info 0.72 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root cells epidermis 140mM NaCl 3 hours 0.72 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
20 root cells epidermis 140mM NaCl 8 hours 0.69 >More info 0.80 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 root cells stele 140mM NaCl 1 hour 0.72 >More info 0.76 >More info root cells stele standard 1 hour root cells stele Original data
22 root cells stele 140mM NaCl 3 hours 0.73 >More info 0.74 >More info root cells stele standard 1 hour root cells stele Original data
23 root cells endodermis 140mM NaCl 1 hour 0.67 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
24 root cells epidermis 140mM NaCl 1 hour 0.58 >More info 0.73 >More info root cells epidermis standard 1 hour root cells epidermis Original data
25 root cortex pH4.6 0.52 >More info 0.76 >More info root cortex pH5.7 Original data GEO bulk
26 Col-0 low oxygen 0.59 >More info 0.63 >More info Col-0 control low oxygen root Original data GEO bulk
27 line J1551-5 days control + 2 days salt s 0.49 >More info 0.71 >More info line J1551-7 days-control Original data
28 bbx24 in Simulated Shade -0.53 >More info -0.66 >More info WT in simulated shade shade seedling Original data
29 OXUPB1-2 meristematic zone 0.60 >More info 0.59 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
30 root stele pH4.6 0.52 >More info 0.66 >More info root stele pH5.7 Original data GEO bulk
31 root endodermis and quiescent center pH4.6 0.48 >More info 0.68 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
32 24h +Pi -0.61 >More info -0.49 >More info 24h -Pi root Original data GEO bulk
33 root Dosed gold 0.61 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
34 0.125 mM gold 24 h 0.61 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
35 (Col-0)+200 uM As 0.47 >More info 0.59 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
36 NaCl Col 0.48 >More info 0.58 >More info Col Original data GEO bulk
37 root epidermis and lateral root cap pH4.6 0.50 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
38 whole roots 140 mM NaCl 4 hour 0.42 >More info 0.63 >More info whole roots standard Original data GEO bulk
39 AgNO3 3 h 0.47 >More info 0.58 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
40 SCL3 OE -0.52 >More info -0.52 >More info Col-0 whole root Original data GEO bulk
41 whole roots 140 mM NaCl 30 minutes 0.52 >More info 0.51 >More info whole roots standard Original data GEO bulk
42 RRE2 Chitin 0.56 >More info 0.46 >More info Chitin Original data GEO bulk
43 B.cinerea 18 h infection 0.42 >More info 0.60 >More info Mock 18 h Original data Botrytis cinerea infection
44 Botrytis cinerea 18h 0.42 >More info 0.60 >More info control 18h Original data GEO bulk
45 6h +Pi -0.46 >More info -0.55 >More info 6h -Pi root Original data GEO bulk
46 (Col-0)+100 uM As 0.43 >More info 0.58 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
47 root endodermis and quiescent center 40 mM NaCl 0.47 >More info 0.54 >More info root endodermis and quiescent center Original data GEO bulk
48 whole roots 140 mM NaCl 1 hour 0.52 >More info 0.48 >More info whole roots standard Original data GEO bulk
49 IMI 4mM 0.43 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
50 CMP 24hr 0.47 >More info 0.53 >More info Acetone 24hr root Original data GEO bulk
51 Whole root - low pH 12H 0.47 >More info 0.53 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
52 rhd2 0.52 >More info 0.47 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
53 line J2731-5 days control + 2 days salt s 0.44 >More info 0.54 >More info line J2731-7 days-control Original data
54 upb1-1 elongation zone -0.50 >More info -0.47 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
55 8hr-pH4.5 0.44 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
56 oas-a1.1 Cd 18h 0.40 >More info 0.57 >More info Cd 18h root Root Original data GEO bulk
57 roots IAA 0.39 >More info 0.58 >More info roots mock Original data GEO bulk
58 Botrytis cinerea 48h 0.35 >More info 0.61 >More info control 48h Original data GEO bulk
59 root longitudinal zone-4 NaCl 0.46 >More info 0.50 >More info root longitudinal zone-4 Original data GEO bulk
60 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
61 whole roots -Fe 6 hour 0.29 >More info 0.66 >More info whole roots standard Original data GEO bulk
62 gun1gun5 far-red pretreated -0.42 >More info -0.53 >More info WT far-red pretreated Original data GEO bulk
63 Shoot -Cs 0.37 >More info 0.58 >More info Control-shoot Original data GEO bulk
64 sid2-2 9 hpi A. brassicicola 0.41 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
65 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
66 root hypoxia total 0.40 >More info 0.53 >More info root control total Original data GEO bulk
67 pepr1-1 Pepr2-3 +Pep2 2h -0.37 >More info -0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
68 Col-0 2HS 0.39 >More info 0.54 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
69 CMP 4hr 0.41 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
70 1h +Pi -0.36 >More info -0.56 >More info 1h -Pi root Original data GEO bulk
71 red illumination +lincomycin 0.17 >More info 0.75 >More info red illumination -lincomycin Original data GEO bulk
72 RRE1 Chitin 0.50 >More info 0.42 >More info Chitin Original data GEO bulk
73 Col0-PsmES4326-24hpi 0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
74 R. solani AG8 0.42 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
75 WT 30μM arsenate 8 hours. 0.42 >More info 0.50 >More info WT control (not supplemented). Original data
76 Col BTH 0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
77 Anoxia 0.33 >More info 0.58 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
78 Laer pretreat GA Flg22 1h 0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
79 root stele -S 0.31 >More info 0.60 >More info root stele pH5.7 Original data GEO bulk
80 Col-0 flu HL 3h 0.41 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
81 whole roots -Fe 48 hour 0.38 >More info 0.52 >More info whole roots standard Original data GEO bulk
82 flu 0.38 >More info 0.52 >More info WT Col Original data GEO bulk
83 siliques AtHb1 control 0.38 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
84 Fe starvation 72 h 0.38 >More info 0.51 >More info Control Original data GEO bulk
85 whole roots -Fe 72 hour 0.38 >More info 0.51 >More info whole roots standard Original data GEO bulk
86 Phaseolicola 2 h (leaf) 0.34 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
87 pmr5 pmr6 0.34 >More info 0.52 >More info Col-0 Original data GEO bulk
88 roottip hypoxia total 0.32 >More info 0.53 >More info roottip control total Original data GEO bulk
89 inhibitor A Treated 0.31 >More info 0.54 >More info Negative Control Original data GEO bulk
90 ein2-1 9 hpi A. brassicicola 0.31 >More info 0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
91 seed germinating in countinuous light 24h SL 0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
92 seedlings protease IV 0.29 >More info 0.52 >More info seedlings nontreated control whole seedling Original data
93 jkd-4 QC 0.30 >More info 0.51 >More info Col-0 QC Quiescent Center Original data
94 SCR 72hr-S 0.31 >More info 0.50 >More info SCR 0hr endodermis Original data
95 bri1-116 0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
96 Ws HS 0.22 >More info 0.58 >More info Ws control heat shocked seedling Original data GEO bulk
97 chito-tetramer 0.24 >More info 0.55 >More info Col Mock Original data GEO bulk
98 eto1-4 +393 -0.28 >More info -0.50 >More info eto1-4 whole seedling Original data GEO bulk
99 root epidermis and lateral root cap -S 0.15 >More info 0.61 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
100 Inflorescences Trp1 0.08 >More info 0.67 >More info Inflorescences ler inflorescences Original data GEO bulk
101 root - 01% oxygen - 2h 0.17 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
102 SHR-GR Time 1H Dex -0.21 >More info -0.53 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
103 Col-0 HS 0.24 >More info 0.50 >More info Col-0 control heat shocked seedling Original data GEO bulk
104 Total RNA 35S:HF-RPL18 0.12 >More info 0.62 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
105 WT (Col-0) heat shock 0.24 >More info 0.50 >More info WT (Col-0) whole seedling Original data GEO bulk
106 akt1-1 0.16 >More info 0.58 >More info Ws-2 Seedlings Original data GEO bulk
107 Methyl Jasmonate 1 h 0.20 >More info 0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
108 root - 04% oxygen - 2h 0.09 >More info 0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
109 Starch sheath 5 days MS incubation 0.21 >More info 0.52 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
110 WT+chitooctaose 0.22 >More info 0.51 >More info WT+water chitooctaose seedlings Original data GEO bulk
111 WT Root Hypoxia 0.23 >More info 0.50 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
112 Shoot apex inflorescence (after bolting) 0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
113 chito-octamer 0.22 >More info 0.50 >More info Col Mock Original data GEO bulk
114 Starch sheath 2 days NAA 0.17 >More info 0.52 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
115 SCR-GR Time 3H Dex 0.16 >More info 0.52 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
116 dark-hs 0.12 >More info 0.55 >More info dark-control seedling Original data
117 Methyl Jasmonate 0.5 h 0.14 >More info 0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
118 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
119 Whole root - low pH 1H 0.01 >More info 0.57 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
120 Red/FR Light45min -0.07 >More info 0.63 >More info FarRed Light 45min Original data Light treatments
121 35SAvr 0.03 >More info 0.51 >More info Ecotype Col Original data GEO bulk
122 root - 08% oxygen - 30min -0.06 >More info 0.60 >More info root - 21% oxygen - 30min Original data GEO bulk
123 Light 3day hml -0.05 >More info 0.56 >More info 0h hml Original data
124 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data