4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on mbd4 mutant thaliana 10-day-old seedling
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Score Experiment Correlation from
mbd4 mutant thaliana 10-day-old seedling		 Correlation to
mbd4 mutant thaliana 10-day-old seedling		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mbd4 mutant thaliana 10-day-old seedling 1.00 >More info 1.00 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
2 mbd6 mutant thaliana 10-day-old seedling 0.81 >More info 0.84 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
3 Aerobic prt6 0.56 >More info 0.76 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
4 Norflurazon 0.62 >More info 0.68 >More info Col-0 Original data GEO bulk
5 Norflurazon 0.62 >More info 0.68 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
6 leaf blade in D 0.54 >More info 0.76 >More info leaf blade in WL leaf blades Original data GEO bulk
7 Aerobic e1 ate2 0.45 >More info 0.80 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
8 WT 3h -P 0.51 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
9 petiole in D 0.53 >More info 0.70 >More info petiole in WL petioles Original data GEO bulk
10 mbd11 mutant thaliana 10-day-old seedling 0.60 >More info 0.60 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
11 pho1 0.47 >More info 0.73 >More info Col2WT Original data GEO bulk
12 Leaf GLU1-KO 0.60 >More info 0.59 >More info Leaf Col(0) rosette leaves Original data GEO bulk
13 tt4 0.52 >More info 0.67 >More info Col-0 aerial part Original data
14 Hypoxic prt6 0.56 >More info 0.61 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
15 seedlings-week-old RECA1-overexpressing
transgenic		 0.52 >More info 0.64 >More info seedlings-week-old Col-0 seedlings Original data
16 Shoot submergence 24h 0.55 >More info 0.60 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
17 anac017-2 AntimycinA 3h -0.60 >More info -0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
18 pap1-D/tt4 0.49 >More info 0.65 >More info Col-0 aerial part Original data
19 IMI 4mM 0.51 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
20 M6PR transgenic leaf 0mM NaCl 0.44 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
21 Col-0 C2H4 24h 0.50 >More info 0.61 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
22 Pseudomonas 0.49 >More info 0.62 >More info Control pseudomonas treated whole seedling Original data GEO bulk
23 Col-0 9 hpi A. brassicicola 0.48 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
24 edr1 36 h powdery mildew 0.50 >More info 0.60 >More info Col-0 36 h powdery mildew Original data GEO bulk
25 4d red light grown hmr-5 seedlings 0.50 >More info 0.60 >More info 4d red light grown WT(Col-0) seedlings Original data
26 leaf blade in FRD 0.45 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
27 1 h Light Total RNA -0.38 >More info -0.72 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
28 Col(gl) leaf 0mM NaCl 0.42 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
29 Col(gl) 0mM NaCl 0.42 >More info 0.67 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
30 ice1 6H Cold 0.52 >More info 0.57 >More info WT 6H Cold Original data GEO bulk
31 UV Stress 24 h (shoot) 0.50 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
32 msh1 albino 0.48 >More info 0.60 >More info WT aerial part Original data GEO bulk
33 ice1 3H Cold 0.53 >More info 0.54 >More info WT 3H Cold Original data GEO bulk
34 cpr5scv1 0.42 >More info 0.65 >More info WT(COL) Original data GEO bulk
35 ataf1-1 mutant Col-0 Bgh inoculated 0.48 >More info 0.58 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
36 pnp1-1 3h +P 0.52 >More info 0.53 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
37 PRR5-VP 12h light on -0.47 >More info -0.58 >More info WT 12h light on whole plant Original data GEO bulk
38 ice1 24H Cold 0.53 >More info 0.51 >More info WT 24H Cold Original data GEO bulk
39 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.61 >More info 0.43 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
40 mil4 BTH 0.47 >More info 0.57 >More info Col BTH rosettes Original data GEO bulk
41 Col BTH 0.37 >More info 0.67 >More info Col rosettes Original data GEO bulk
42 Col-0 2HS 0.35 >More info 0.69 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
43 ERF96OE 0.43 >More info 0.61 >More info WT leaf Original data
44 ceh1 mutant 0.46 >More info 0.58 >More info Parent line Original data
45 Hypoxic e1 ate 0.50 >More info 0.53 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
46 Root submergence 7h 0.46 >More info 0.57 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
47 pmr5 pmr6 0.42 >More info 0.61 >More info Col-0 Original data GEO bulk
48 MYB12OX/tt4 0.44 >More info 0.59 >More info Col-0 aerial part Original data
49 shoot-10 μM DEX- 6 hr 0.41 >More info 0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
50 CLO 4mM 0.43 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
51 ein2-1 9 hpi A. brassicicola 0.41 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
52 CT101 ozone 0.55 >More info 0.46 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
53 Col-Luc WT 3h antimycin A 0.50 >More info 0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
54 WT Col-0 Bgh inoculated 0.46 >More info 0.55 >More info WT Col-0 Un-inoculated Original data GEO bulk
55 Col-0 low oxygen 0.45 >More info 0.56 >More info Col-0 Original data GEO bulk
56 petiole in FRD 0.45 >More info 0.56 >More info petiole in WL petioles Original data GEO bulk
57 Shoot dark control 7h 0.42 >More info 0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
58 Root submergence 24h 0.48 >More info 0.53 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
59 cpr5npr1 0.37 >More info 0.64 >More info WT(COL) Original data GEO bulk
60 S15-118 0.37 >More info 0.64 >More info wt Original data GEO bulk
61 cat2-2; 8h switch to ambient CO2 concentrations; 0.20 >More info 0.81 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
62 shoot-10 μM DEX- 12 hr 0.38 >More info 0.63 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
63 safener treated 0.49 >More info 0.51 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
64 R. solani AG8 0.45 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
65 1 h Light IP RNA -0.36 >More info -0.64 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
66 aba3-1 0.32 >More info 0.68 >More info wt Original data GEO bulk
67 sid2-2 9 hpi A. brassicicola 0.49 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
68 coi1-16 ein2 sid2 ctrl -0.53 >More info -0.46 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
69 root - 01% oxygen - 48h 0.33 >More info 0.66 >More info root - 21% oxygen - 48h Original data GEO bulk
70 Col-0 norflurazon 0.48 >More info 0.51 >More info Col-0 control Original data GEO bulk
71 phyABDE Rc50 -0.43 >More info -0.56 >More info phyABDE Dark red light whole seedling Original data GEO bulk
72 JMJ24-IBM1 double knockout -0.41 >More info -0.58 >More info WT Original data GEO bulk
73 cpr5npr1svi1 0.39 >More info 0.60 >More info WT(COL) Original data GEO bulk
74 Sulfometuron EC50 0.36 >More info 0.63 >More info Carrier Original data GEO bulk
75 flu over-tAPX 0.35 >More info 0.63 >More info WT Col Original data GEO bulk
76 ice1 control 0.47 >More info 0.51 >More info WT control Original data GEO bulk
77 Col0-PsmES4326-24hpi 0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
78 aerial organ callus inducing medium 12 h 0.44 >More info 0.53 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
79 rcf1-1 cold 0h 0.37 >More info 0.60 >More info WT cold 0h Control seedlings Original data GEO bulk
80 sfr3 cold 0.36 >More info 0.61 >More info WT cold All aerial tissue Original data GEO bulk
81 S14-150 0.37 >More info 0.60 >More info wt Original data GEO bulk
82 Night Time Treatment -0.43 >More info -0.54 >More info Night Time Control 1hr white light pulse aerial rosette Original data
83 Day Time Treatment -0.35 >More info -0.62 >More info Day Time Control 1hr white light pulse aerial rosette Original data
84 Elevated CO2 AMPLE N NIGHT 0.36 >More info 0.61 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
85 gpa1-4/agb1-2 ozone 2d -0.28 >More info -0.68 >More info Col ozone 2d ozone Original data GEO bulk
86 Fenclorim 4hr 0.42 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
87 CMV-A2b mutant 0.35 >More info 0.61 >More info Mock-At Aerial tissues Original data GEO bulk
88 Col-0 +lincomycin 0.45 >More info 0.51 >More info Col-0 -lincomycin Original data GEO bulk
89 9 hr Hypoxia IP RNA 0.44 >More info 0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
90 pepr1-1 Pepr2-3 +Pep2 2h -0.39 >More info -0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
91 30m light -0.24 >More info -0.71 >More info before light whole seedlings Original data GEO bulk
92 cop1 Seedling BL 0.43 >More info 0.52 >More info WT Seedling BL Original data GEO bulk
93 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.54 >More info 0.40 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
94 Te ozone 0.56 >More info 0.38 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
95 6h +Pi -0.39 >More info -0.55 >More info 6h -Pi root Original data GEO bulk
96 ABA 1 h -0.36 >More info -0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
97 ACC 3 h 0.36 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
98 Ba1 UV 0.25 >More info 0.69 >More info Ba1 mock UV seedling Original data
99 flu 0.32 >More info 0.62 >More info WT Col Original data GEO bulk
100 WT 1wk -P 0.32 >More info 0.62 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
101 Nicotinamide-49hr 0.37 >More info 0.57 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
102 CMP 4hr 0.43 >More info 0.51 >More info Acetone 4hr root Original data GEO bulk
103 pmr5 0.37 >More info 0.57 >More info Col-0 Original data GEO bulk
104 vtc2 (I) 0.38 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
105 Shoot dark control 24h 0.37 >More info 0.56 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
106 M6PR transgenic 0mM NaCl 0.39 >More info 0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
107 mkk1/mkk2 24h BTH rep 0.42 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
108 CAX1/CAX3 mutant 0.41 >More info 0.52 >More info Col whole plant Original data GEO bulk
109 MPK6 ox Shoot Hypoxia 0.30 >More info 0.63 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
110 WT 2-4h Xanthomonas 0.42 >More info 0.51 >More info WT T0 Original data GEO bulk
111 FOX line K19624 0.36 >More info 0.56 >More info empty vector control (T3) FOX lines Original data GEO bulk
112 abi4 vtc2 (I) 0.38 >More info 0.54 >More info Col (I) rosette Original data GEO bulk
113 atmyc2 cop1 Seedling BL 0.40 >More info 0.52 >More info WT Seedling BL Original data GEO bulk
114 WT seedlings NaCl -0.39 >More info -0.53 >More info WT seedlings control Seedlings Original data GEO bulk
115 root - 04% oxygen - 48h 0.21 >More info 0.71 >More info root - 21% oxygen - 48h Original data GEO bulk
116 Atss3 Light4 -0.30 >More info -0.62 >More info Atss3 Dark0.5 Original data GEO bulk
117 oligomycin 1 h 0.41 >More info 0.51 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
118 60m light -0.26 >More info -0.65 >More info before light whole seedlings Original data GEO bulk
119 Nicotinamide-69hr 0.37 >More info 0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
120 SA 4mM 0.28 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
121 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
122 rcf1-1 cold 24h 0.39 >More info 0.52 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
123 dde2-2 9 hpi A. brassicicola 0.40 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
124 gun1-9 norflurazon 0.41 >More info 0.50 >More info gun1-9 control Original data GEO bulk
125 Seedling-HeatStressed TOTALmRNA 0.41 >More info 0.50 >More info Seedling-control TOTALmRNA seedling Original data
126 Col-0 ozone 0.54 >More info 0.36 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
127 24h +Pi -0.38 >More info -0.52 >More info 24h -Pi root Original data GEO bulk
128 WT cold 0.35 >More info 0.55 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
129 bio4-1 mutant leaves 0.34 >More info 0.55 >More info WT leaves leaves Original data GEO bulk
130 seedling 1.5h after HZE atm-1 0.38 >More info 0.51 >More info seedling day 1 unirradiated atm-1 1.5h Original data
131 bHLH122 ox -0.34 >More info -0.54 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
132 WOX1-1 0.33 >More info 0.55 >More info Col-0 aerial part Original data
133 Elevated CO2 leaf primordia 0.34 >More info 0.54 >More info Ambient CO2 leaf primordia leaf primordia Original data
134 Col whole leaf 7dpi 0.37 >More info 0.51 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
135 root hypoxia total 0.35 >More info 0.53 >More info root control total Original data GEO bulk
136 edr1 96 h powdery mildew 0.37 >More info 0.51 >More info Col-0 96 h powdery mildew Original data GEO bulk
137 sav1-1 shade 0.37 >More info 0.51 >More info Col-0 shade seedlings Original data GEO bulk
138 hira-root -0.37 >More info -0.51 >More info WT-root root Original data
139 Triazolopyrimidine EC50 0.31 >More info 0.57 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
140 35S:PCO1 hypoxia -0.30 >More info -0.58 >More info WT hypoxia whole rosette Original data
141 Stem tissue 5 days NAA 0.31 >More info 0.56 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
142 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
143 myb3 myb3r4d 0.13 >More info 0.74 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
144 +1.6 mM Tween 20 1 h. 0.27 >More info 0.60 >More info +distilled water 1 h. Original data GEO bulk
145 coi1-16 ein2 sid2 ozone 0.52 >More info 0.34 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
146 root - 04% oxygen - 2h 0.19 >More info 0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
147 Col whole leaf 5dpi 0.32 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
148 Nicotinamide-53hr 0.34 >More info 0.52 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
149 Primisulfuron EC50 0.31 >More info 0.55 >More info Carrier (primisulfuron) Original data GEO bulk
150 pvip1 pvip2 0.36 >More info 0.50 >More info Col-0 whole rosettes Original data GEO bulk
151 anti-sense for AtAOX1a 0.15 >More info 0.71 >More info WT Original data GEO bulk
152 Elevated CO2 AMPLE N DAY 0.36 >More info 0.50 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
153 Dex-rga(delta17) 4h GA4 -0.33 >More info -0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
154 rosette leaves fdh 0.28 >More info 0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
155 pepr1-1 Pepr2-3 +Pep2 10h -0.35 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
156 WT AntimycinA 3h 0.35 >More info 0.50 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
157 Red/FR Light45min 0.03 >More info 0.81 >More info FarRed Light 45min Original data Light treatments
158 root - 08% oxygen - 2h 0.16 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
159 Col-0 48 hpi 0.33 >More info 0.51 >More info Col-0 uninoculated Original data GEO bulk
160 Mutant lwd1_lwd2 0.27 >More info 0.57 >More info Wildtype for phy mutants Original data GEO bulk
161 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.27 >More info 0.57 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
162 Col-0-avrB-6h 0.30 >More info 0.53 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
163 toc1-1-49hr 0.28 >More info 0.55 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
164 S58-2 0.33 >More info 0.50 >More info wt Original data GEO bulk
165 SCR-GR Time 1H Dex 0.25 >More info 0.58 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
166 WT Shoot Hypoxia 0.26 >More info 0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
167 root - 01% oxygen - 2h 0.17 >More info 0.65 >More info root - 21% oxygen - 2h Original data GEO bulk
168 miR393 0h -0.20 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
169 TA induced 0.29 >More info 0.53 >More info Methanol TA Suspension cells Original data GEO bulk
170 pap1-D 0.29 >More info 0.53 >More info Col-0 aerial part Original data
171 Col-0 SA 0.25 >More info 0.57 >More info Col-0 Original data GEO bulk
172 C24 ozone 0.50 >More info 0.31 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
173 8hr-pH4.5 0.29 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
174 ckh1 CK200 0.19 >More info 0.62 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
175 cat2-long-day 4d 0.29 >More info 0.52 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
176 Shoot -Cs 0.15 >More info 0.66 >More info Control-shoot Original data GEO bulk
177 Glyphosate EC50 0.20 >More info 0.61 >More info Carrier (Glyphosate) Original data GEO bulk
178 Hydrogen Peroxide 500 uM 0.26 >More info 0.55 >More info Control RB and PER Hydrogen Peroxide Original data
179 sfr6 drought -0.22 >More info -0.59 >More info WT drought All aerial tissue Original data GEO bulk
180 Col-0 wt Hypoxic 0.30 >More info 0.50 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
181 gh3.5-1D 48 hpi 0.28 >More info 0.52 >More info Col-0 uninoculated Original data GEO bulk
182 sni1 0.26 >More info 0.54 >More info WT Original data GEO bulk
183 sng1 0.27 >More info 0.52 >More info WT aerial region Original data GEO bulk
184 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
185 ADD3 -0.29 >More info -0.50 >More info WT aerial part Original data GEO bulk
186 8h-DC3000 avrRpm1 0.27 >More info 0.51 >More info 8h-DC3000 leaves Original data GEO bulk
187 rcf1-1 cold 12h 0.26 >More info 0.52 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
188 35S::PI ap3-3 35S::AP-GR +DEX 0.24 >More info 0.54 >More info 0hr DEX Original data GEO bulk
189 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
190 ptpks2 -0.18 >More info -0.59 >More info Col-WT leaves Original data GEO bulk
191 24h light (+Lincomycin) 0.26 >More info 0.51 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
192 ABA JA 24h 0.14 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
193 shl-2 Pool 0.26 >More info 0.51 >More info Ler Pool seedling Original data GEO bulk
194 Leafminer damaged seedlings 0.21 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
195 camta3-2 0.22 >More info 0.53 >More info WT Original data GEO bulk
196 Atss3 Light1 -0.19 >More info -0.56 >More info Atss3 Dark0.5 Original data GEO bulk
197 AAF-OX 0.23 >More info 0.52 >More info Col-0 Rosette leaf Original data GEO bulk
198 OsSAP11 expressing -0.23 >More info -0.52 >More info WT seedlings Original data GEO bulk
199 Shoot -P 0.13 >More info 0.62 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
200 seedling 6h after HZE WT 0.25 >More info 0.50 >More info seedling day 1 unirradiated WT 6h Original data
201 Col in Pi deficiency medium 0.21 >More info 0.53 >More info Col in control medium root Original data GEO bulk
202 bak1-3 +Pep2 10h 0.22 >More info 0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
203 Blue Light 45 min -0.18 >More info -0.55 >More info White Light 45min Original data Light treatments
204 6h volatiles Sm. R3089 0.18 >More info 0.55 >More info 6h untreated whole seedling Original data GEO bulk
205 GO5; 8h switch to ambient CO2 concentrations; 0.19 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
206 E.orontii Infection 3 day 0.22 >More info 0.50 >More info Uninfection 3 day Original data Elicitor treatments
207 AFB1 0h 0.22 >More info 0.50 >More info Col 0h Leaf Original data GEO bulk
208 12h-DC3000 avrRpm1 0.22 >More info 0.50 >More info 12h-DC3000 leaves Original data GEO bulk
209 root longitudinal zone-3 -Fe -0.06 >More info -0.65 >More info root longitudinal zone-3 standard Original data GEO bulk
210 des1.1 0.21 >More info 0.50 >More info Leaves-WT leaf Original data GEO bulk
211 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
212 bio4-1 mutant watered00µM biotin leaves -0.18 >More info -0.51 >More info bio4-1 mutant leaves leaves Original data GEO bulk
213 sfr6 cold 0.19 >More info 0.50 >More info WT cold All aerial tissue Original data GEO bulk
214 ISOXABEN -0.19 >More info -0.50 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
215 P.syringae AvrRpt2 4 h (leaf) 0.15 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
216 amiR-tor induced 3d 0.13 >More info 0.54 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
217 root - 08% oxygen - 48h 0.10 >More info 0.57 >More info root - 21% oxygen - 48h Original data GEO bulk
218 Col ozone 3h 0.15 >More info 0.50 >More info Col clean-air 3h ozone Original data GEO bulk
219 nar1-4/- 0.15 >More info 0.50 >More info WT whole seedling Original data GEO bulk
220 Rose Bengal 0.5 uM 0.10 >More info 0.54 >More info Control RB and PER Rose Bengal Original data
221 msh1 recA3 untreated 0.10 >More info 0.53 >More info WT untreated above-ground parts Original data GEO bulk
222 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
223 treated group 0.09 >More info 0.54 >More info Control group Original data
224 Shoot apex inflorescence (after bolting) -0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
225 2xX4x interploidy cross 0.08 >More info 0.54 >More info 2xX2x cross Original data GEO bulk
226 NJ15 -0.02 >More info 0.63 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
227 Shoot submergence 7h 0.60 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
228 WT (Ler) CK25 -0.05 >More info -0.54 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
229 atmyc2 Seedling BL 0.08 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
230 Cs shoot -0.03 >More info -0.54 >More info control shoot Original data GEO bulk
231 AGL24 induced -0.03 >More info -0.54 >More info WT-ESTRADIOL Original data GEO bulk
232 root - 04% oxygen - 30min -0.01 >More info 0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
233 opr3 OPDA 0.5 h 0.01 >More info 0.55 >More info opr3 0 h Original data GEO bulk
234 root - 08% oxygen - 30min -0.05 >More info 0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
235 vte2-1 1d vernalization -0.01 >More info 0.56 >More info WT 1d vernalization Original data GEO bulk
236 JA 3h -0.00 >More info 0.54 >More info EtOH 3h 3hr Original data GEO bulk
237 Mutant cry1 -0.52 >More info -0.01 >More info Col-0 Original data GEO bulk
238 cry1 low light -0.52 >More info -0.01 >More info Col-O low light Original data GEO bulk
239 WT Atum 1h 0.01 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
240 ara1/2mut -0.05 >More info 0.57 >More info Col-3 Original data GEO bulk
241 Chemically 0.04 >More info -0.52 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
242 GO5; harvested 8h continiously maintained in high
CO2;		 -0.03 >More info 0.51 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
243 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
244 IBM1 knockout -0.27 >More info 0.56 >More info WT Original data GEO bulk