4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on SCL3 OE
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List of experiments correlated with "SCL3 OE"  Help Download transcriptome of top 30
Score Experiment Correlation from
SCL3 OE		 Correlation to
SCL3 OE		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 SCL3 OE 1.00 >More info 1.00 >More info Col-0 whole root Original data GEO bulk
2 24h +Pi 0.71 >More info 0.73 >More info 24h -Pi root Original data GEO bulk
3 Col-0 Root 100 mM ATP 30 min -0.59 >More info -0.74 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
4 Col in Pi deficiency medium -0.54 >More info -0.79 >More info Col in control medium root Original data GEO bulk
5 root Dosed gold -0.62 >More info -0.61 >More info root No gold .125 mM gold 24 h roots Original data
6 0.125 mM gold 24 h -0.62 >More info -0.61 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
7 Root -Cs -0.52 >More info -0.64 >More info Control-root Original data GEO bulk
8 Whole root - low pH 24H -0.54 >More info -0.61 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
9 phr1 phl1 Root-Pi 0.42 >More info 0.73 >More info WT Shoot+Pi roots Original data GEO bulk
10 1h +Pi 0.47 >More info 0.67 >More info 1h -Pi root Original data GEO bulk
11 Oxidative Stress 3 h (root) 0.62 >More info 0.50 >More info Stress mock 3 h (root) Original data Stress treatments
12 gun5 control -0.56 >More info -0.56 >More info Col-0 control Original data GEO bulk
13 atmyc2 cop1 Seedling Dark -0.44 >More info -0.68 >More info WT Seedling Dark Original data GEO bulk
14 hira-root 0.51 >More info 0.59 >More info WT-root root Original data
15 6h +Pi 0.49 >More info 0.60 >More info 6h -Pi root Original data GEO bulk
16 oas-a1.1 Cd 18h -0.46 >More info -0.62 >More info Cd 18h root Root Original data GEO bulk
17 Whole root - low pH 3H -0.43 >More info -0.64 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
18 4C 1h -0.42 >More info -0.65 >More info 4C 0h Original data GEO bulk
19 R. solani AG8 -0.52 >More info -0.54 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
20 WT Seedling BL -0.43 >More info -0.63 >More info WT Seedling Dark Original data GEO bulk
21 whole roots 140 mM NaCl 30 minutes -0.50 >More info -0.55 >More info whole roots standard Original data GEO bulk
22 Whole root - low pH 1H -0.36 >More info -0.69 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
23 root cells epidermis 140mM NaCl 48 hours -0.47 >More info -0.58 >More info root cells epidermis standard 1 hour root cells epidermis Original data
24 root cells cortex 140mM NaCl 20 hours -0.52 >More info -0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
25 Mutant ga1-5 0.52 >More info 0.51 >More info Ler-1 Original data Comparison of plant hormone related mutant
26 cop1 Seedling Dark -0.31 >More info -0.72 >More info WT Seedling Dark Original data GEO bulk
27 rsa1 salt 0 h -0.56 >More info -0.46 >More info WT salt 0 h Control seedlings Original data GEO bulk
28 root cells epidermis 140mM NaCl 32 hours -0.47 >More info -0.55 >More info root cells epidermis standard 1 hour root cells epidermis Original data
29 bbx24 in Simulated Shade 0.54 >More info 0.47 >More info WT in simulated shade shade seedling Original data
30 phr1 Shoot-Pi -0.34 >More info -0.67 >More info WT Root-Pi shoots Original data GEO bulk
31 P.p 30hai -0.40 >More info -0.61 >More info At-Control roots Original data GEO bulk
32 afb3-1 2h KNO3 -0.31 >More info -0.70 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
33 WT light -0.40 >More info -0.61 >More info WT dark Original data GEO bulk
34 root cells cortex 140mM NaCl 32 hours -0.50 >More info -0.50 >More info root cells cortex standard 1 hour root cells cortex Original data
35 8hr-pH4.5 -0.46 >More info -0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
36 R. solani AG2-1 -0.37 >More info -0.62 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
37 root cells endodermis 140mM NaCl 48 hours -0.44 >More info -0.55 >More info root cells endodermis standard 1 hour root cells endodermis Original data
38 root cells endodermis 140mM NaCl 32 hours -0.42 >More info -0.57 >More info root cells endodermis standard 1 hour root cells endodermis Original data
39 root cells endodermis 140mM NaCl 20 hours -0.46 >More info -0.53 >More info root cells endodermis standard 1 hour root cells endodermis Original data
40 root cells cortex 140mM NaCl 48 hours -0.49 >More info -0.50 >More info root cells cortex standard 1 hour root cells cortex Original data
41 root cells cortex 140mM NaCl 8 hours -0.51 >More info -0.47 >More info root cells cortex standard 1 hour root cells cortex Original data
42 IAA 0.5 h -0.28 >More info -0.70 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
43 GA 120min -0.40 >More info -0.58 >More info CON120 GA 120 min. root tips Original data GEO bulk
44 root cells stele 140mM NaCl 48 hours -0.42 >More info -0.56 >More info root cells stele standard 1 hour root cells stele Original data
45 root cells epidermis 140mM NaCl 20 hours -0.45 >More info -0.53 >More info root cells epidermis standard 1 hour root cells epidermis Original data
46 dorn1-1 Root 100 mM ATP 30 min 0.42 >More info 0.56 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
47 mbd6 mutant thaliana 10-day-old seedling -0.62 >More info -0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
48 root cells endodermis and quiescent center -Fe -0.46 >More info -0.51 >More info whole roots standard Original data GEO bulk
49 vtc2 mature somatic embryo -0.29 >More info -0.68 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
50 root cells stele 140mM NaCl 32 hours -0.40 >More info -0.55 >More info root cells stele standard 1 hour root cells stele Original data
51 Whole root - low pH 12H -0.43 >More info -0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
52 Mutant iaa17-6 (IAA) -0.55 >More info -0.38 >More info Col (IAA) Original data GEO bulk
53 whole roots 140 mM NaCl 1 hour -0.42 >More info -0.51 >More info whole roots standard Original data GEO bulk
54 root cells stele 140mM NaCl 20 hours -0.41 >More info -0.52 >More info root cells stele standard 1 hour root cells stele Original data
55 root protoplasts 40 mM NaCl -0.34 >More info -0.55 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
56 12h-DC3000 avrRpm1 -0.17 >More info -0.72 >More info 12h-DC3000 leaves Original data GEO bulk
57 Whole root - low pH 6H -0.37 >More info -0.51 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
58 S14-150 -0.30 >More info -0.58 >More info wt Original data GEO bulk
59 WT Root Hypoxia -0.19 >More info -0.67 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
60 CabpBVR2 0.25 >More info 0.61 >More info WT Original data GEO bulk
61 4C 2h(SOIL) -0.36 >More info -0.50 >More info 4C 0h(SOIL) Original data GEO bulk
62 grf1/grf2/grf3 -0.51 >More info -0.34 >More info WS Original data GEO bulk
63 Col-0 mbs1-1 HL 3h 0.54 >More info 0.31 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
64 root - 08% oxygen - 2h -0.22 >More info -0.63 >More info root - 21% oxygen - 2h Original data GEO bulk
65 AtLysM RLK1 mutant water -0.35 >More info -0.50 >More info WT water Original data GEO bulk
66 WT Rc50 -0.32 >More info -0.52 >More info WT Dark red light whole seedling Original data GEO bulk
67 seedlings-week-old RECA1-overexpressing
transgenic		 -0.50 >More info -0.33 >More info seedlings-week-old Col-0 seedlings Original data
68 Red/FR Light45min 0.10 >More info 0.73 >More info FarRed Light 45min Original data Light treatments
69 4x -0.50 >More info -0.32 >More info 2x two week old seedlings Original data
70 Col-0 wt Hypoxic -0.26 >More info -0.56 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
71 WT(Ler) Rc50 -0.31 >More info -0.51 >More info WT(Ler) Dark Original data GEO bulk
72 root hypoxia total -0.28 >More info -0.52 >More info root control total Original data GEO bulk
73 aba3-1 -0.27 >More info -0.53 >More info wt Original data GEO bulk
74 35S:MYB28 like miR -0.10 >More info -0.70 >More info WT for miR Original data GEO bulk
75 iron minus 6 h 0.19 >More info 0.60 >More info iron +6 h root Original data GEO bulk
76 root stele pH4.6 -0.27 >More info -0.52 >More info root stele pH5.7 Original data GEO bulk
77 Light -0.17 >More info -0.61 >More info Control Original data GEO bulk
78 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
79 abi1 hypocotyl -0.19 >More info -0.59 >More info Ler hypocotyl hypocotyl Original data GEO bulk
80 WT(Ler) Rc15 -0.23 >More info -0.55 >More info WT(Ler) Dark Original data GEO bulk
81 2hr transitory KNO3 ECR cell 0.21 >More info 0.57 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
82 Col-0 V. longisporum-inoculated 48 hpi -0.25 >More info -0.52 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
83 gun1-9 control -0.50 >More info -0.26 >More info Col-0 control Original data GEO bulk
84 root - 04% oxygen - 30min -0.09 >More info -0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
85 12m.KCl -0.26 >More info -0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
86 35S::RSL4 0.23 >More info 0.52 >More info Col-0 Control root Original data GEO bulk
87 FarRed Light 45min -0.05 >More info -0.69 >More info White Light 45min Original data Light treatments
88 root longitudinal zone-3 -Fe 0.03 >More info 0.71 >More info root longitudinal zone-3 standard Original data GEO bulk
89 P.p 6hai -0.21 >More info -0.53 >More info At-Control roots Original data GEO bulk
90 clf-28 0.50 >More info 0.22 >More info Col whole plant Original data GEO bulk
91 aux1 mutant roots ethylene -0.22 >More info -0.50 >More info roots air Original data GEO bulk
92 2hr continuous KNO3 ECR cell 0.06 >More info 0.66 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
93 bak1-3 +Pep2 2h -0.12 >More info -0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
94 xyl-grown cell culture- 1h 1mM Fru -0.13 >More info -0.56 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
95 Norflurazon 0.13 >More info 0.55 >More info Col-0 Original data GEO bulk
96 root - 04% oxygen - 48h -0.00 >More info -0.68 >More info root - 21% oxygen - 48h Original data GEO bulk
97 Laer pretreat JA Flg22 0h 0.12 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
98 Shoot -P -0.14 >More info -0.54 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
99 Norflurazon 0.13 >More info 0.55 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
100 nrpe1 0.14 >More info 0.53 >More info WT Original data
101 root - 08% oxygen - 30min -0.11 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
102 root - 01% oxygen - 30min -0.01 >More info -0.66 >More info root - 21% oxygen - 30min Original data GEO bulk
103 ced1 -0.17 >More info -0.50 >More info WT PEG 6hr seedlings Original data GEO bulk
104 Cs shoot 0.11 >More info 0.56 >More info control shoot Original data GEO bulk
105 Dark 4 h pls RedLight 1min -0.09 >More info -0.58 >More info Dark 4 h Original data Light treatments
106 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
107 35S:PCO1 hypoxia 0.15 >More info 0.51 >More info WT hypoxia whole rosette Original data
108 ANOXIA 0.06 >More info 0.60 >More info ANOXIA+SUCROSE Original data GEO bulk
109 myb61 xylem -0.15 >More info -0.50 >More info wt xylem xylem Original data GEO bulk
110 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
111 root - 01% oxygen - 48h -0.11 >More info -0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
112 nia1nia2noa1-2 -0.50 >More info -0.10 >More info Col-0 whole seedlings Original data GEO bulk
113 Col-0 low oxygen 0.06 >More info 0.53 >More info Col-0 Original data GEO bulk
114 root - 04% oxygen - 2h -0.01 >More info -0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
115 SCR-GR Time 3H Dex -0.06 >More info -0.51 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
116 sfr3 control -0.03 >More info -0.54 >More info WT control All aerial tissue Original data GEO bulk
117 2xX4x interploidy cross -0.00 >More info 0.55 >More info 2xX2x cross Original data GEO bulk
118 TAMM27 roots 2hr KCl control -0.04 >More info -0.51 >More info Col0 roots 2hr KCl control root Original data GEO bulk
119 Mutant pif1-2 (Dark etiol) 0.02 >More info 0.51 >More info Col-0 (Dark etiol) Original data GEO bulk
120 pif1-2 dark 0.02 >More info 0.51 >More info Wt dark Original data GEO bulk
121 Col BTH -0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
122 WR 35S 3h BL 0.02 >More info -0.52 >More info WR 35S 0h BL brassinosteroid root Original data
123 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
124 P-chlorophenoxy- isobutyric acid 3 h -0.11 >More info 0.59 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
125 dor drought -0.10 >More info 0.58 >More info WT drought Original data GEO bulk
126 Col0-PsmES4326-24hpi -0.15 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
127 Shoot apex inflorescence (after bolting) -0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
128 root - 01% oxygen - 2h 0.17 >More info -0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
129 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
130 npr1 -0.17 >More info 0.60 >More info WT(COL) Original data GEO bulk
131 cat2-2; 8h switch to ambient CO2 concentrations; -0.18 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
132 xyl-grown cell culture- 1h 1mM Suc -0.20 >More info 0.55 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
133 Heat shock optimum -0.31 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
134 Leafminer damaged seedlings -0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
135 WT roots - Fe -0.18 >More info 0.50 >More info WT roots + Fe Roots Original data GEO bulk
136 siliques AtHb1 control -0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk