4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT cold
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List of experiments correlated with "WT cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT cold		 Correlation to
WT cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT cold 1.00 >More info 1.00 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
2 4C 7d(SOIL) 0.82 >More info 0.84 >More info 4C 0h(SOIL) Original data GEO bulk
3 4C 7d 0.76 >More info 0.76 >More info 4C 0h Original data GEO bulk
4 Col leaves 48h LT 0.78 >More info 0.74 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
5 sid2-1 cold -0.69 >More info -0.83 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
6 Col whole leaf 5dpi 0.72 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
7 UV Stress 24 h (shoot) 0.72 >More info 0.77 >More info Stress mock 24 h (shoot) Original data Stress treatments
8 cpr5scv1 0.69 >More info 0.77 >More info WT(COL) Original data GEO bulk
9 cpr5npr1svi1 0.68 >More info 0.78 >More info WT(COL) Original data GEO bulk
10 WT cold 24h 0.70 >More info 0.74 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
11 Col whole leaf 7dpi 0.68 >More info 0.75 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
12 aba3-1 0.60 >More info 0.83 >More info wt Original data GEO bulk
13 camta1/3 warm 0.62 >More info 0.80 >More info WT warm entire aerial part Original data GEO bulk
14 mkk1/mkk2 control rep 0.72 >More info 0.70 >More info Col-0 Time 0 rep Original data GEO bulk
15 ceh1 mutant 0.67 >More info 0.74 >More info Parent line Original data
16 Cold Stress 24 h (shoot) 0.72 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
17 WT 24h cold 0.72 >More info 0.68 >More info WT warm 24h cold entire aerial part Original data GEO bulk
18 Col leaves 120h LT 0.72 >More info 0.67 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
19 vtc2 (I) 0.68 >More info 0.70 >More info Col (I) rosette Original data GEO bulk
20 S58-2 0.62 >More info 0.75 >More info wt Original data GEO bulk
21 cpr5 0.62 >More info 0.75 >More info WT(COL) Original data GEO bulk
22 Elevated CO2 AMPLE N DAY 0.60 >More info 0.77 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
23 abi4 vtc2 (I) 0.68 >More info 0.69 >More info Col (I) rosette Original data GEO bulk
24 cpr5npr1 0.67 >More info 0.69 >More info WT(COL) Original data GEO bulk
25 toc1-1-77hr 0.69 >More info 0.66 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
26 tt4 0.72 >More info 0.63 >More info Col-0 aerial part Original data
27 Col BTH 0.67 >More info 0.67 >More info Col rosettes Original data GEO bulk
28 CMV-WT 0.65 >More info 0.69 >More info Mock-At Aerial tissues Original data GEO bulk
29 Col-0 INA 6d 0.69 >More info 0.65 >More info Col-0 MOCK 6d Original data GEO bulk
30 camta1/2/3 warm 0.65 >More info 0.69 >More info WT warm entire aerial part Original data GEO bulk
31 cpr5 0.62 >More info 0.72 >More info WT seedling Original data GEO bulk
32 mkk1/mkk2 24h BTH rep 0.69 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
33 Elevated CO2 AMPLE N NIGHT 0.55 >More info 0.78 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
34 4C 24h(SOIL) 0.64 >More info 0.68 >More info 4C 0h(SOIL) Original data GEO bulk
35 camta2/3 warm 0.62 >More info 0.70 >More info WT warm entire aerial part Original data GEO bulk
36 E.orontii Infection 3 day 0.59 >More info 0.73 >More info Uninfection 3 day Original data Elicitor treatments
37 Col-0 48 hpi 0.68 >More info 0.63 >More info Col-0 uninoculated Original data GEO bulk
38 35S:RPS4 eds1-2 24h -0.62 >More info -0.69 >More info 35S:RPS4 24h leaves Original data
39 camta3-1 0.65 >More info 0.65 >More info WT Original data GEO bulk
40 IMI 4mM 0.63 >More info 0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
41 S15-118 0.60 >More info 0.70 >More info wt Original data GEO bulk
42 del1-1 mutant 5d uninfected 0.52 >More info 0.77 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
43 pmr5 pmr6 0.65 >More info 0.64 >More info Col-0 Original data GEO bulk
44 SLWF infested 0.54 >More info 0.75 >More info SLWF uninfested rosette tissue Original data GEO bulk
45 RPL18 TuMV inoculated total RNA 0.64 >More info 0.64 >More info mock inoculated total RNA PO Original data GEO bulk
46 AvrRpt2 Col-0 6hpi 0.71 >More info 0.57 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
47 ataf1-1 mutant Col-0 Bgh inoculated 0.59 >More info 0.69 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
48 CLO 4mM 0.62 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
49 Cor hrpS 10h 0.71 >More info 0.56 >More info Mock 10h Cor hrpS Original data GEO bulk
50 long 17-degree- 0.62 >More info 0.65 >More info control long Original data GEO bulk
51 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info 0.70 >More info seedlings-week-old Col-0 seedlings Original data
52 sid2 -0.53 >More info -0.73 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
53 sni1 0.54 >More info 0.72 >More info WT Original data GEO bulk
54 gh3.5-1D 48 hpi 0.65 >More info 0.61 >More info Col-0 uninoculated Original data GEO bulk
55 WT cold 12 h 0.59 >More info 0.67 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
56 Laer pretreat GA Flg22 1h 0.54 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
57 WT +elf18 10h 0.67 >More info 0.58 >More info WT untreated elf18 Original data GEO bulk
58 Col whole leaf 5 dpi 0.62 >More info 0.63 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
59 pvip1 pvip2 0.62 >More info 0.63 >More info Col-0 whole rosettes Original data GEO bulk
60 WT powdery mildew 0.60 >More info 0.64 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
61 Col whole leaf amplified 5 dpi 0.61 >More info 0.63 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
62 GST 4 h (leaf) 0.57 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
63 toc1-1-53hr 0.67 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
64 GST NPP1 4 h (leaf) 0.61 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
65 Mutant siz1-3 (Drought) 0.56 >More info 0.67 >More info Col-0 (Drought) Original data GEO bulk
66 siz1-3 drought 0.56 >More info 0.67 >More info Col-0 drought Original data GEO bulk
67 Atss3 Light4 -0.64 >More info -0.58 >More info Atss3 Dark0.5 Original data GEO bulk
68 OH1 0.57 >More info 0.65 >More info Col-0 leaves Original data GEO bulk
69 pmr4-1 powdery mildew 0.58 >More info 0.64 >More info WT powdery mildew uninoculated Original data GEO bulk
70 RPL18 TuMV inoculated polysomal RNA 0.60 >More info 0.61 >More info mock inoculated polysomal RNA PO Original data GEO bulk
71 smg7b-1 0.55 >More info 0.66 >More info WT whole plant Original data GEO bulk
72 Col-0 C2H4 24h 0.66 >More info 0.55 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
73 Cor 10h 0.58 >More info 0.63 >More info Mock 10h Cor Original data GEO bulk
74 toc1-1-49hr 0.58 >More info 0.62 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
75 B.cinerea 18 h infection 0.50 >More info 0.70 >More info Mock 18 h Original data Botrytis cinerea infection
76 Botrytis cinerea 18h 0.50 >More info 0.70 >More info control 18h Original data GEO bulk
77 mkk2 24h BTH rep 0.57 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
78 Col(gl) 0mM NaCl 0.59 >More info 0.60 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
79 pad4-PsmES4326-24hpi -0.62 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
80 pnp1-1 3h +P 0.61 >More info 0.58 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
81 camta1/2/3 24h cold 0.53 >More info 0.66 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
82 Col(gl) leaf 0mM NaCl 0.59 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
83 atmospheric CO2 low Mg shoot 0.68 >More info 0.51 >More info atmospheric CO2 normal Mg shoot Shoot Original data
84 Nicotinamide-49hr 0.54 >More info 0.64 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
85 MYB12OX/tt4 0.64 >More info 0.54 >More info Col-0 aerial part Original data
86 A. thaliana-A. lyrata hybrid -0.52 >More info -0.66 >More info A. thaliana mature leaves before flowering Original data GEO bulk
87 Cd 24h root -0.62 >More info -0.56 >More info WT-Untreated Shoot Original data GEO bulk
88 WT +Pep2 10h 0.63 >More info 0.55 >More info WT untreated Pep2 Original data GEO bulk
89 4C 24h 0.53 >More info 0.65 >More info 4C 0h Original data GEO bulk
90 35S:RPS4 eds1-2 8h -0.52 >More info -0.66 >More info 35S:RPS4 8h leaves Original data
91 Total RNA csp1 cold 0.59 >More info 0.59 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
92 E.coli TUV86 2 fliC 7h 0.59 >More info 0.59 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
93 WT-SA 0.58 >More info 0.60 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
94 CAX1/CAX3 mutant 0.57 >More info 0.61 >More info Col whole plant Original data GEO bulk
95 Col0-PsmES4326-24hpi 0.57 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
96 vte2-1 3d vernalization 0.58 >More info 0.59 >More info WT 3d vernalization Original data GEO bulk
97 WT 24H Cold 0.53 >More info 0.64 >More info WT control Original data GEO bulk
98 pmr5 0.58 >More info 0.59 >More info Col-0 Original data GEO bulk
99 rosette leaves lcr 0.53 >More info 0.64 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
100 eds16 whole leaf 5dpi -0.50 >More info -0.66 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
101 pap1-D/tt4 0.64 >More info 0.52 >More info Col-0 aerial part Original data
102 pepr1-1 Pepr2-3 +Pep2 2h -0.55 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
103 Te ozone 0.63 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
104 Laer Flg22 2h 0.62 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
105 cs26 long day 0.53 >More info 0.63 >More info Leaves-WT-LD leaf Original data GEO bulk
106 PAHs stress 0.52 >More info 0.64 >More info exp control phenanthrene whole plants Original data GEO bulk
107 CT101 ozone 0.65 >More info 0.50 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
108 Shoot dark control 7h 0.58 >More info 0.57 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
109 E.coli 0157 H7 7h 0.56 >More info 0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
110 mil4 BTH 0.56 >More info 0.59 >More info Col BTH rosettes Original data GEO bulk
111 npr1 sni1 SA 0.55 >More info 0.60 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
112 coi1-16 ein2 sid2 ctrl -0.63 >More info -0.52 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
113 M6PR transgenic leaf 0mM NaCl 0.55 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
114 Col-0 under 4 days salt 0.64 >More info 0.50 >More info Col-0 under control 4 days salt treatment rosette Original data
115 seedlings protease IV 0.53 >More info 0.61 >More info seedlings nontreated control whole seedling Original data
116 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.65 >More info 0.49 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
117 bio4-1 mutant leaves 0.55 >More info 0.59 >More info WT leaves leaves Original data GEO bulk
118 wrky33 Bc inoculation 14h 0.64 >More info 0.49 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
119 short 8-degree- 0.52 >More info 0.61 >More info control short Original data GEO bulk
120 efr-1 +elf18 10h -0.52 >More info -0.61 >More info WT +elf18 10h elf18 Original data GEO bulk
121 col-5 hrpA 12h 0.53 >More info 0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
122 coi1-16 ein2 sid2 ozone 0.65 >More info 0.48 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
123 MIL4 ox BTH 0.58 >More info 0.55 >More info Col BTH Original data GEO bulk
124 eds16 whole leaf 3dpi -0.37 >More info -0.76 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
125 dde2-2 9 hpi A. brassicicola 0.52 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
126 M6PR transgenic 0mM NaCl 0.58 >More info 0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
127 cs26 short-day -0.53 >More info -0.59 >More info Leaves-WT-SD leaf Original data GEO bulk
128 WT-NOCO2 INFECTED 0.54 >More info 0.58 >More info WT-MOCK Original data GEO bulk
129 WT 6H Cold 0.53 >More info 0.59 >More info WT control Original data GEO bulk
130 npr1 sni1 brca2a SA -0.51 >More info -0.61 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
131 OE WRKY63.3 high light 0.56 >More info 0.56 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
132 Lipopolysaccaride4 h (leaf) 0.59 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
133 rosette leaves bdg 0.40 >More info 0.72 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
134 Heat shock optimum 0.47 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
135 gh3.5D uninoculated -0.56 >More info -0.55 >More info Col-0 48 hpi Original data GEO bulk
136 aerial organ callus inducing medium 12 h 0.60 >More info 0.51 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
137 Mutant siz1-3 0.51 >More info 0.60 >More info Col-0 Original data GEO bulk
138 siz1-3 control 0.51 >More info 0.60 >More info Col-0 control Original data GEO bulk
139 LTN008-2 aza-dc 0.60 >More info 0.51 >More info LTN012-2 Mock Original data
140 aerial organ callus inducing medium 48 h 0.60 >More info 0.51 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
141 camta3-2 0.47 >More info 0.64 >More info WT Original data GEO bulk
142 edr1 18 h powdery mildew 0.47 >More info 0.64 >More info Col-0 18 h powdery mildew Original data GEO bulk
143 abi4-102 (I) 0.59 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
144 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.61 >More info 0.49 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
145 WT Bc inoculation 14h 0.62 >More info 0.48 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
146 Col leaf 100mM NaCl 0.53 >More info 0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
147 Col leaf 100mM NaCl 0.53 >More info 0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
148 rosette leaves fdh 0.57 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
149 Col 100mM NaCl 0.53 >More info 0.57 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
150 Laer Flg22+GA 2h 0.59 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
151 CMP 4hr 0.51 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
152 aerial organ callus inducing medium 24h 0.55 >More info 0.55 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
153 Laer treat paclobutrazol (PAC) 0.60 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
154 Col-0-avrB-6h 0.48 >More info 0.62 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
155 S14-150 0.56 >More info 0.53 >More info wt Original data GEO bulk
156 +1.6 mM Tween 20 1 h. 0.53 >More info 0.56 >More info +distilled water 1 h. Original data GEO bulk
157 hrpA 7h 0.53 >More info 0.56 >More info Mock 7h hrpA Original data GEO bulk
158 WT 3h -P 0.57 >More info 0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
159 D2O 0.59 >More info 0.50 >More info H2O seedling Original data GEO bulk
160 Flagellin 4 h (leaf) 0.57 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
161 HopZ1a treated 0.51 >More info 0.58 >More info col Original data GEO bulk
162 Col-0 INA 48h 0.48 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
163 ice1 6H Cold 0.48 >More info 0.61 >More info WT 6H Cold Original data GEO bulk
164 Compost 0.47 >More info 0.62 >More info Perlite Compost Original data GEO bulk
165 Col-0 9 hpi A. brassicicola 0.52 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
166 Cold Stress 24 h (root) 0.55 >More info 0.53 >More info Stress mock 24 h (root) Original data Stress treatments
167 toc1-1-57hr 0.56 >More info 0.52 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
168 Elevated CO2 fully expanded leaf 0.55 >More info 0.52 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
169 sid2-2 24hpi A. brassicicola -0.56 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
170 hrcC 0.51 >More info 0.56 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
171 Col ozone 2d 0.43 >More info 0.64 >More info Col clean-air 2d ozone Original data GEO bulk
172 ice1 control 0.57 >More info 0.50 >More info WT control Original data GEO bulk
173 scrm-D 0.59 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
174 msh1 albino 0.49 >More info 0.58 >More info WT aerial part Original data GEO bulk
175 sta1 0.62 >More info 0.44 >More info WT Original data GEO bulk
176 AvrRpm1 2 h (leaf) 0.50 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
177 Light 3day wt -0.50 >More info -0.56 >More info 0h wt Original data
178 short 10-degree- 0.47 >More info 0.59 >More info control short Original data GEO bulk
179 flu over-tAPX 0.48 >More info 0.58 >More info WT Col Original data GEO bulk
180 anac017-2 AntimycinA 3h -0.45 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
181 Primisulfuron EC50 0.56 >More info 0.49 >More info Carrier (primisulfuron) Original data GEO bulk
182 Ws 100mM NaCl 0.52 >More info 0.53 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
183 Ws leaf 100mM NaCl 0.52 >More info 0.53 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
184 Shoot submergence 24h 0.55 >More info 0.50 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
185 miR393 0h -0.41 >More info -0.64 >More info WT 0h Leaf tissue Original data GEO bulk
186 amiRAP aerobic -0.42 >More info -0.63 >More info WT aerobic aerobic Original data GEO bulk
187 Leafminer damaged seedlings 0.49 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
188 aerial organ callus inducing medium 96 h 0.57 >More info 0.48 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
189 wavy 0.48 >More info 0.57 >More info WT Original data GEO bulk
190 Laer Flg22 1h 0.54 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
191 C24 ozone 0.63 >More info 0.41 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
192 35S::ERF104 Flg22 4h 0.51 >More info 0.53 >More info 35S::ERF104 H2O 4h Original data GEO bulk
193 Nicotinamide-53hr 0.55 >More info 0.48 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
194 WT Col-0 Bgh inoculated 0.42 >More info 0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
195 ORS1 induced 0.43 >More info 0.60 >More info mock-induced rosette leaves Original data GEO bulk
196 edr1 36 h powdery mildew 0.49 >More info 0.54 >More info Col-0 36 h powdery mildew Original data GEO bulk
197 WT +elf18 2h 0.49 >More info 0.54 >More info WT untreated elf18 Original data GEO bulk
198 Seedling KUA1-IOX est 0.46 >More info 0.57 >More info Seedling KUA1-IOX mock Original data
199 irradiated leaf (WT 1d) 0.53 >More info 0.49 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
200 Time-0 chr11-1chr17-1 -0.51 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
201 long 10-degree- 0.56 >More info 0.46 >More info control long Original data GEO bulk
202 Laer Flg22+GA 1h 0.53 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
203 Col-0 ozone 0.61 >More info 0.41 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
204 Col-0 low oxygen 0.53 >More info 0.49 >More info Col-0 Original data GEO bulk
205 WT flg22 2h 0.51 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
206 eds16 whole leaf 0h UI -0.39 >More info -0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
207 Stem tissue 2 days NAA 0.39 >More info 0.63 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
208 ein2-1 9 hpi A. brassicicola 0.46 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
209 Imidazolinone EC50 0.55 >More info 0.46 >More info Carrier (Imidazolinone) Original data GEO bulk
210 4C 0h 0.51 >More info 0.50 >More info 22C 0h Original data GEO bulk
211 npr1-PsmES4326-24hpi -0.54 >More info -0.47 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
212 WOX1-1 0.55 >More info 0.46 >More info Col-0 aerial part Original data
213 Phaseolicola 2 h (leaf) 0.43 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
214 petiole in D 0.48 >More info 0.53 >More info petiole in WL petioles Original data GEO bulk
215 oas-a1.1 Cd 18h 0.45 >More info 0.56 >More info Cd 18h root Root Original data GEO bulk
216 coi1-2 0.43 >More info 0.58 >More info Col-0 mock Whole seedling Original data GEO bulk
217 Col-0 SA 0.38 >More info 0.63 >More info Col-0 Original data GEO bulk
218 Leaf GLU1-KO 0.56 >More info 0.44 >More info Leaf Col(0) rosette leaves Original data GEO bulk
219 long 8-degree- 0.50 >More info 0.50 >More info control long Original data GEO bulk
220 gai Control 0.57 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
221 UV 0.51 >More info 0.49 >More info WT aerial region Original data GEO bulk
222 ERF96OE 0.50 >More info 0.50 >More info WT leaf Original data
223 Dark 6h ivd 0.53 >More info 0.47 >More info 0h ivd Original data
224 MIL4 ox 0.56 >More info 0.44 >More info Col Original data GEO bulk
225 Sulfometuron EC50 0.57 >More info 0.43 >More info Carrier Original data GEO bulk
226 P.syringae AvrRpt2 4 h (leaf) 0.48 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
227 35:SUB1A 0.49 >More info 0.51 >More info WT whole seedling Original data GEO bulk
228 WT 2-4h Xanthomonas 0.31 >More info 0.69 >More info WT T0 Original data GEO bulk
229 INA 0.42 >More info 0.58 >More info CK INA seedling Original data
230 AZC 0.55 >More info 0.44 >More info noneHS Original data GEO bulk
231 12h-DC3000 avrRpm1 0.52 >More info 0.47 >More info 12h-DC3000 leaves Original data GEO bulk
232 mpk6-ko Flg22 4h 0.43 >More info 0.56 >More info mpk6-ko H2O 4h Original data GEO bulk
233 Nicotinamide-73hr 0.48 >More info 0.51 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
234 CMP 24hr 0.47 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
235 DFPM 0.41 >More info 0.58 >More info control Original data GEO bulk
236 pepr1-1 Pepr2-3 +Pep2 10h -0.48 >More info -0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
237 bak1-3 +Pep2 10h 0.45 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
238 CBF3 0mM NaCl 0.50 >More info 0.48 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
239 ice1 3H Cold 0.51 >More info 0.47 >More info WT 3H Cold Original data GEO bulk
240 del1-1 5dpi 0.62 >More info 0.36 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
241 Botrytis cinerea 48h 0.53 >More info 0.45 >More info control 48h Original data GEO bulk
242 SPT4-R3 seedlings0 DAS 0.50 >More info 0.48 >More info Col-0 seedlings0 DAS seedlings Original data
243 bHLH122 ox -0.53 >More info -0.45 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
244 Col ozone 3h 0.41 >More info 0.57 >More info Col clean-air 3h ozone Original data GEO bulk
245 rsa3-1 Na 24h 0.32 >More info 0.66 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
246 camta1/2 warm -0.43 >More info -0.55 >More info WT 24h cold entire aerial part Original data GEO bulk
247 4C 1h 0.29 >More info 0.69 >More info 4C 0h Original data GEO bulk
248 MYB12OX 0.47 >More info 0.51 >More info Col-0 aerial part Original data
249 Laer pretreat GA Flg22 0h 0.58 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
250 Bur-0-3h IAA 0.56 >More info 0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
251 PRR5-VP 6h light on 0.55 >More info 0.42 >More info WT 6h light on whole plant Original data GEO bulk
252 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.47 >More info WT light Original data GEO bulk
253 flu 0.47 >More info 0.50 >More info WT Col Original data GEO bulk
254 erf104-ko Flg22 4h 0.46 >More info 0.51 >More info erf104-ko H2O 4h Original data GEO bulk
255 miR393 flg22 2h 0.46 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
256 npr1-1 SA -0.50 >More info -0.46 >More info Col-0 SA complete seedling Original data
257 Laer pretreat GA Flg22 2h 0.50 >More info 0.46 >More info Laer pretreat water control leaf discs Original data GEO bulk
258 AFB1 flg22 2h 0.52 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
259 long 14-degree- 0.63 >More info 0.33 >More info control long Original data GEO bulk
260 E.orontii Infection 6 h 0.34 >More info 0.62 >More info Uninfection 6 h Original data Elicitor treatments
261 Col-Luc WT 3h antimycin A 0.45 >More info 0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
262 20d after anthesis 0.45 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
263 pnp1-1 1wk -P 0.56 >More info 0.39 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
264 apum23 0.56 >More info 0.39 >More info WT (Col-3) aerial parts Original data GEO bulk
265 pho1 0.39 >More info 0.56 >More info Col2WT Original data GEO bulk
266 SOS1 0mM NaCl 0.52 >More info 0.43 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
267 short 17-degree- 0.42 >More info 0.53 >More info control short Original data GEO bulk
268 dense canopy 0.42 >More info 0.53 >More info single (control) petiole Original data GEO bulk
269 tumour 0.41 >More info 0.54 >More info non-tumor tumour Original data GEO bulk
270 ein2-1 24hpi A. brassicicola -0.44 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
271 Mutant lwd1_lwd2 0.38 >More info 0.56 >More info Wildtype for phy mutants Original data GEO bulk
272 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.38 >More info 0.56 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
273 WT NAA/flg 2h 0.53 >More info 0.41 >More info WT 0h Leaf tissue Original data GEO bulk
274 DC3000 hrcC 2 h (leaf) 0.44 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
275 oas-a1.1 Cd 24h 0.37 >More info 0.57 >More info Cd 24h root Shoot Original data GEO bulk
276 phyB mutant 22C 10hrs -0.33 >More info -0.61 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
277 bio4-1 mutant watered00µM biotin leaves -0.30 >More info -0.64 >More info bio4-1 mutant leaves leaves Original data GEO bulk
278 Fenclorim 4hr 0.44 >More info 0.50 >More info Acetone 4hr root Original data GEO bulk
279 npr1 0.36 >More info 0.58 >More info WT(COL) Original data GEO bulk
280 Shoot -Cs 0.37 >More info 0.57 >More info Control-shoot Original data GEO bulk
281 col 24h4c set4 0.44 >More info 0.50 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
282 ws 24h4c q8ws 0.51 >More info 0.42 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
283 gpa1 -ABA LF 0.52 >More info 0.41 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
284 scrm-D:mute 0.51 >More info 0.42 >More info Col-0 WT whole seedling Original data GEO bulk
285 GA 0.33 >More info 0.60 >More info none GA Rosette Original data GEO bulk
286 C24-3h IAA 0.53 >More info 0.39 >More info C24-0h IAA whole plant Original data GEO bulk
287 short 14-degree- 0.36 >More info 0.56 >More info control short Original data GEO bulk
288 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.39 >More info 0.53 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
289 Col-0 V. longisporum-inoculated 48 hpi 0.37 >More info 0.55 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
290 Triazolopyrimidine EC50 0.50 >More info 0.42 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
291 8h-DC3000 avrRpm1 0.50 >More info 0.42 >More info 8h-DC3000 leaves Original data GEO bulk
292 Cycloheximide 3 h 0.41 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
293 oligomycin 4 h 0.42 >More info 0.50 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
294 long 12-degree- 0.62 >More info 0.29 >More info control long Original data GEO bulk
295 Osmotic Stress 24 h (shoot) 0.50 >More info 0.40 >More info Stress mock 24 h (shoot) Original data Stress treatments
296 express RfBP -0.50 >More info -0.40 >More info WT green part of the whole plant Original data GEO bulk
297 irradiated leaf (cmt 1d) 0.51 >More info 0.39 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
298 mbd4 mutant thaliana 10-day-old seedling 0.55 >More info 0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
299 dor drought 0.50 >More info 0.40 >More info WT drought Original data GEO bulk
300 C24 24h cold -0.53 >More info -0.37 >More info Col 24h cold leaf Original data GEO bulk
301 4d red light grown hmr-5 seedlings 0.52 >More info 0.38 >More info 4d red light grown WT(Col-0) seedlings Original data
302 Glyphosate EC50 0.51 >More info 0.38 >More info Carrier (Glyphosate) Original data GEO bulk
303 vtc1 (II) 0.37 >More info 0.52 >More info Col (II) rosette Original data GEO bulk
304 35S:RPS4 eds1-2 2h -0.31 >More info -0.58 >More info 35S:RPS4 2h leaves Original data
305 rosette Light Wounded 0.34 >More info 0.54 >More info rosette Light Control Original data GEO bulk
306 anti-sense for AtAOX1a 0.53 >More info 0.35 >More info WT Original data GEO bulk
307 eds16 whole leaf 1dpi -0.24 >More info -0.64 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
308 OE WRKY63.3 0.35 >More info 0.53 >More info OE WRKY40.4 none leaf Original data GEO bulk
309 OE WRKY40.4 high light 0.33 >More info 0.54 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
310 leaf blade in D 0.37 >More info 0.50 >More info leaf blade in WL leaf blades Original data GEO bulk
311 OsRLCK253 expressing -0.37 >More info -0.50 >More info WT seedlings Original data GEO bulk
312 mil4 0.55 >More info 0.31 >More info Col rosettes Original data GEO bulk
313 Total RNA 35S:HF-RPL18 0.31 >More info 0.55 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
314 toc1-1-65hr 0.34 >More info 0.51 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
315 WT roots - Fe 0.31 >More info 0.54 >More info WT roots + Fe Roots Original data GEO bulk
316 Col-0 DCA 6d 0.51 >More info 0.32 >More info Col-0 MOCK 6d Original data GEO bulk
317 A6 mutant 0.33 >More info 0.50 >More info WT rosette leaves Rosette leaves Original data GEO bulk
318 Col-0-3h IAA 0.50 >More info 0.32 >More info Col-0-0h IAA whole plant Original data GEO bulk
319 WT leaves - Fe 0.31 >More info 0.51 >More info WT leaves + Fe Leaves Original data GEO bulk
320 brm-101 0.32 >More info 0.50 >More info Ler Original data GEO bulk
321 Shoot P recovery 0.50 >More info 0.31 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
322 auxin and brassinazole seedlings 0.51 >More info 0.30 >More info auxin seedlings Original data GEO bulk
323 Lip0 UV 0.26 >More info 0.55 >More info Lip0 mock UV seedling Original data
324 siliques AtHb1 control 0.28 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
325 P.p 2.5hai 0.22 >More info 0.58 >More info At-Control roots Original data GEO bulk
326 PstDC3000 48h 0.19 >More info 0.60 >More info WT untreated 48hr leaf Original data GEO bulk
327 light -0.59 >More info -0.18 >More info dark light seedling Original data GEO bulk
328 Got7 UV 0.23 >More info 0.54 >More info Got7 mock UV seedling Original data
329 eds16 whole leaf 7dpi -0.27 >More info -0.50 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
330 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
331 phyB mutant 16C 4hrs 0.57 >More info 0.18 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
332 treated group 0.17 >More info 0.56 >More info Control group Original data
333 bak1-3 +Pep2 2h 0.19 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
334 Col-0 DCA 48h 0.12 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
335 Ba1 UV 0.20 >More info 0.50 >More info Ba1 mock UV seedling Original data
336 IAA7mII over-expressor IAA Treated 0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
337 CeO2 germinant -0.19 >More info -0.50 >More info Millipore Water germinant CeO2 seedling Original data
338 pad4-est1b-1-doublemutant 0.52 >More info 0.16 >More info pad4-mutant developed rosette leaves Original data GEO bulk
339 Salicylic Acid 3 h 0.14 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
340 SA 24h 0.14 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
341 SA 4mM 0.61 >More info 0.00 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
342 irradiated leaf (cmt 5d) 0.08 >More info 0.53 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
343 Shoot submergence 7h 0.60 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
344 HairpinZ 4 h (leaf) 0.62 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
345 vte2 leaves 120h LT 0.53 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
346 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
347 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
348 FAMA induced 4h -0.02 >More info -0.50 >More info control 4h Whole seedling Original data GEO bulk
349 WT 3H Cold -0.05 >More info 0.57 >More info WT control Original data GEO bulk
350 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
351 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.55 >More info 0.07 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
352 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
353 P. infestans 6 h (leaf) 0.60 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
354 Col PSTDC3000 24h 0.58 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
355 Light 3day hml -0.51 >More info 0.55 >More info 0h hml Original data