4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells cortex 140mM NaCl 48 hours
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List of experiments correlated with "root cells cortex 140mM NaCl 48 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells cortex 140mM NaCl 48 hours		 Correlation to
root cells cortex 140mM NaCl 48 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells cortex 140mM NaCl 48 hours 1.00 >More info 1.00 >More info root cells cortex standard 1 hour root cells cortex Original data
2 root cells cortex 140mM NaCl 20 hours 0.89 >More info 0.92 >More info root cells cortex standard 1 hour root cells cortex Original data
3 root cells cortex 140mM NaCl 32 hours 0.90 >More info 0.90 >More info root cells cortex standard 1 hour root cells cortex Original data
4 root cells cortex 140mM NaCl 8 hours 0.86 >More info 0.82 >More info root cells cortex standard 1 hour root cells cortex Original data
5 root cells endodermis 140mM NaCl 48 hours 0.83 >More info 0.83 >More info root cells endodermis standard 1 hour root cells endodermis Original data
6 root cells endodermis 140mM NaCl 32 hours 0.82 >More info 0.82 >More info root cells endodermis standard 1 hour root cells endodermis Original data
7 root cells epidermis 140mM NaCl 48 hours 0.77 >More info 0.86 >More info root cells epidermis standard 1 hour root cells epidermis Original data
8 root cells endodermis 140mM NaCl 20 hours 0.81 >More info 0.79 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root cells stele 140mM NaCl 48 hours 0.77 >More info 0.83 >More info root cells stele standard 1 hour root cells stele Original data
10 root cells cortex 140mM NaCl 3 hours 0.81 >More info 0.79 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells cortex 140mM NaCl 1 hour 0.78 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
12 root cells epidermis 140mM NaCl 20 hours 0.76 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 root cells epidermis 140mM NaCl 32 hours 0.74 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
14 root cells stele 140mM NaCl 32 hours 0.76 >More info 0.81 >More info root cells stele standard 1 hour root cells stele Original data
15 root cells epidermis 140mM NaCl 3 hours 0.73 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
16 root cells endodermis 140mM NaCl 3 hours 0.80 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
17 root cells endodermis 140mM NaCl 8 hours 0.78 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
18 root cells epidermis 140mM NaCl 8 hours 0.70 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
19 root cells stele 140mM NaCl 20 hours 0.69 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
20 root cells endodermis 140mM NaCl 1 hour 0.70 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
21 root cells stele 140mM NaCl 3 hours 0.68 >More info 0.75 >More info root cells stele standard 1 hour root cells stele Original data
22 root cells stele 140mM NaCl 1 hour 0.67 >More info 0.75 >More info root cells stele standard 1 hour root cells stele Original data
23 root cells stele 140mM NaCl 8 hours 0.67 >More info 0.73 >More info root cells stele standard 1 hour root cells stele Original data
24 root cells epidermis 140mM NaCl 1 hour 0.59 >More info 0.74 >More info root cells epidermis standard 1 hour root cells epidermis Original data
25 bbx24 in Simulated Shade -0.56 >More info -0.76 >More info WT in simulated shade shade seedling Original data
26 Col-0 low oxygen 0.57 >More info 0.66 >More info Col-0 control low oxygen root Original data GEO bulk
27 OXUPB1-2 meristematic zone 0.60 >More info 0.60 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
28 rhd2 0.53 >More info 0.66 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
29 root stele pH4.6 0.47 >More info 0.70 >More info root stele pH5.7 Original data GEO bulk
30 line J1551-5 days control + 2 days salt s 0.47 >More info 0.69 >More info line J1551-7 days-control Original data
31 AgNO3 3 h 0.42 >More info 0.73 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
32 root Dosed gold 0.60 >More info 0.52 >More info root No gold .125 mM gold 24 h roots Original data
33 0.125 mM gold 24 h 0.60 >More info 0.52 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
34 upb1-1 elongation zone -0.45 >More info -0.66 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
35 root longitudinal zone-4 NaCl 0.50 >More info 0.61 >More info root longitudinal zone-4 Original data GEO bulk
36 root cortex pH4.6 0.40 >More info 0.69 >More info root cortex pH5.7 Original data GEO bulk
37 whole roots 140 mM NaCl 30 minutes 0.48 >More info 0.61 >More info whole roots standard Original data GEO bulk
38 24h +Pi -0.59 >More info -0.49 >More info 24h -Pi root Original data GEO bulk
39 6h +Pi -0.51 >More info -0.55 >More info 6h -Pi root Original data GEO bulk
40 root epidermis and lateral root cap pH4.6 0.45 >More info 0.60 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
41 whole roots -Fe 6 hour 0.33 >More info 0.71 >More info whole roots standard Original data GEO bulk
42 root endodermis and quiescent center pH4.6 0.38 >More info 0.66 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
43 TNT-seedlings 0.40 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
44 NaCl Col 0.48 >More info 0.54 >More info Col Original data GEO bulk
45 RRE1 Chitin 0.57 >More info 0.44 >More info Chitin Original data GEO bulk
46 8hr-pH4.5 0.48 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
47 whole roots 140 mM NaCl 1 hour 0.48 >More info 0.53 >More info whole roots standard Original data GEO bulk
48 RRE2 Chitin 0.57 >More info 0.43 >More info Chitin Original data GEO bulk
49 Anoxia 0.42 >More info 0.58 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
50 Leafminer damaged seedlings 0.44 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
51 SCL3 OE -0.50 >More info -0.49 >More info Col-0 whole root Original data GEO bulk
52 1h +Pi -0.37 >More info -0.61 >More info 1h -Pi root Original data GEO bulk
53 whole roots 140 mM NaCl 4 hour 0.39 >More info 0.59 >More info whole roots standard Original data GEO bulk
54 2 hr Hypoxia Total RNA 0.46 >More info 0.52 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
55 plant (tga2-5-6) 4h phytoprostane A1 0.41 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
56 root hypoxia total 0.41 >More info 0.55 >More info root control total Original data GEO bulk
57 Osmotic Stress 24 h (root) 0.54 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
58 Col-0 2HS 0.40 >More info 0.54 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
59 jkd-4 QC 0.39 >More info 0.55 >More info Col-0 QC Quiescent Center Original data
60 Heat shock optimum 0.28 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
61 oas-a1.1 Cd 18h 0.40 >More info 0.52 >More info Cd 18h root Root Original data GEO bulk
62 roottip hypoxia total 0.32 >More info 0.60 >More info roottip control total Original data GEO bulk
63 Col0-PsmES4326-24hpi 0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
64 flu 0.38 >More info 0.52 >More info WT Col Original data GEO bulk
65 root endodermis and quiescent center 40 mM NaCl 0.40 >More info 0.50 >More info root endodermis and quiescent center Original data GEO bulk
66 WT 30μM arsenate 8 hours. 0.39 >More info 0.51 >More info WT control (not supplemented). Original data
67 Botrytis cinerea 48h 0.32 >More info 0.58 >More info control 48h Original data GEO bulk
68 epidermis auxin 0.38 >More info 0.51 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
69 roots IAA 0.31 >More info 0.58 >More info roots mock Original data GEO bulk
70 IMI 4mM 0.33 >More info 0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
71 CeO2 germinant -0.34 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
72 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
73 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
74 (Col-0)+200 uM As 0.34 >More info 0.52 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
75 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
76 R. solani AG8 0.35 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
77 oligomycin 1 h 0.35 >More info 0.51 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
78 sid2-2 9 hpi A. brassicicola 0.35 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
79 Pst-DC3000(avrRpm1)-4hpi 0.34 >More info 0.51 >More info Pst-DC3000-4hpi Original data GEO bulk
80 columella auxin 0.34 >More info 0.51 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
81 pepr1-1 Pepr2-3 +Pep2 2h -0.31 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
82 Fe starvation 72 h 0.30 >More info 0.53 >More info Control Original data GEO bulk
83 whole roots -Fe 72 hour 0.30 >More info 0.53 >More info whole roots standard Original data GEO bulk
84 (Col-0)+100 uM As 0.31 >More info 0.52 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
85 whole roots -Fe 48 hour 0.31 >More info 0.50 >More info whole roots standard Original data GEO bulk
86 toc1-1-53hr 0.26 >More info 0.55 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
87 red illumination +lincomycin 0.09 >More info 0.72 >More info red illumination -lincomycin Original data GEO bulk
88 chito-tetramer 0.24 >More info 0.56 >More info Col Mock Original data GEO bulk
89 seed germinating in countinuous light 24h SL 0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
90 WT Root Hypoxia 0.26 >More info 0.54 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
91 ein2-1 9 hpi A. brassicicola 0.29 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
92 P.syringae vir 4 h (leaf) 0.21 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
93 root - 01% oxygen - 2h 0.22 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
94 toc1-1-73hr 0.26 >More info 0.51 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
95 root longitudinal zone-3 pH 4.6 0.25 >More info 0.52 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
96 root stele -S 0.23 >More info 0.54 >More info root stele pH5.7 Original data GEO bulk
97 WT+H2O2 0.27 >More info 0.50 >More info WT H2O2 Original data GEO bulk
98 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
99 inhibitor A Treated 0.21 >More info 0.53 >More info Negative Control Original data GEO bulk
100 Ws HS 0.17 >More info 0.57 >More info Ws control heat shocked seedling Original data GEO bulk
101 Methyl Jasmonate 1 h 0.20 >More info 0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
102 root - 04% oxygen - 2h 0.06 >More info 0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
103 WT+chitooctaose 0.23 >More info 0.50 >More info WT+water chitooctaose seedlings Original data GEO bulk
104 root epidermis and lateral root cap -S 0.15 >More info 0.58 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
105 NahG 0.22 >More info 0.51 >More info Col-0 Leaves Original data GEO bulk
106 Light 0.16 >More info 0.55 >More info Control Original data GEO bulk
107 Chemically 0.15 >More info 0.56 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
108 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
109 Inflorescences Trp1 0.05 >More info 0.65 >More info Inflorescences ler inflorescences Original data GEO bulk
110 Col-0 HS 0.17 >More info 0.52 >More info Col-0 control heat shocked seedling Original data GEO bulk
111 WT (Col-0) heat shock 0.17 >More info 0.52 >More info WT (Col-0) whole seedling Original data GEO bulk
112 Starch sheath 5 days MS incubation 0.19 >More info 0.50 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
113 JA 3h 0.16 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
114 Red/FR Light45min 0.04 >More info 0.61 >More info FarRed Light 45min Original data Light treatments
115 SHR-GR Time 1H Dex -0.11 >More info -0.54 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
116 Cs shoot -0.05 >More info -0.60 >More info control shoot Original data GEO bulk
117 root - 04% oxygen - 30min 0.07 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
118 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
119 Total RNA 35S:HF-RPL18 0.00 >More info 0.61 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
120 dark-hs 0.07 >More info 0.53 >More info dark-control seedling Original data
121 35SAvr 0.03 >More info 0.56 >More info Ecotype Col Original data GEO bulk
122 Got7 UV 0.08 >More info 0.50 >More info Got7 mock UV seedling Original data
123 IAA 0.5 h 0.06 >More info 0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
124 Whole root - low pH 1H 0.00 >More info 0.57 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
125 root - 08% oxygen - 30min -0.07 >More info 0.63 >More info root - 21% oxygen - 30min Original data GEO bulk
126 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
127 root - 01% oxygen - 30min -0.03 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk