4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on root cells cortex 140mM NaCl 1 hour
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "root cells cortex 140mM NaCl 1 hour"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells cortex 140mM NaCl 1 hour		 Correlation to
root cells cortex 140mM NaCl 1 hour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells cortex 140mM NaCl 1 hour 1.00 >More info 1.00 >More info root cells cortex standard 1 hour root cells cortex Original data
2 root cells endodermis 140mM NaCl 1 hour 0.85 >More info 0.87 >More info root cells endodermis standard 1 hour root cells endodermis Original data
3 root cells stele 140mM NaCl 1 hour 0.86 >More info 0.84 >More info root cells stele standard 1 hour root cells stele Original data
4 NaCl Col 0.79 >More info 0.87 >More info Col Original data GEO bulk
5 root cells epidermis 140mM NaCl 1 hour 0.79 >More info 0.86 >More info root cells epidermis standard 1 hour root cells epidermis Original data
6 root cells cortex 140mM NaCl 8 hours 0.84 >More info 0.79 >More info root cells cortex standard 1 hour root cells cortex Original data
7 root cells epidermis 140mM NaCl 3 hours 0.79 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
8 root endodermis and quiescent center 40 mM NaCl 0.76 >More info 0.87 >More info root endodermis and quiescent center Original data GEO bulk
9 root cells stele 140mM NaCl 3 hours 0.80 >More info 0.81 >More info root cells stele standard 1 hour root cells stele Original data
10 root cells cortex 140mM NaCl 3 hours 0.82 >More info 0.78 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells cortex 140mM NaCl 48 hours 0.81 >More info 0.78 >More info root cells cortex standard 1 hour root cells cortex Original data
12 root longitudinal zone-4 NaCl 0.76 >More info 0.83 >More info root longitudinal zone-4 Original data GEO bulk
13 root cells cortex 140mM NaCl 20 hours 0.80 >More info 0.78 >More info root cells cortex standard 1 hour root cells cortex Original data
14 root cells endodermis 140mM NaCl 3 hours 0.81 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
15 root cells cortex 140mM NaCl 32 hours 0.79 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
16 whole roots 140 mM NaCl 4 hour 0.75 >More info 0.80 >More info whole roots standard Original data GEO bulk
17 root cells epidermis 140mM NaCl 8 hours 0.74 >More info 0.80 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 root cells stele 140mM NaCl 8 hours 0.77 >More info 0.76 >More info root cells stele standard 1 hour root cells stele Original data
19 root cells stele 140mM NaCl 32 hours 0.75 >More info 0.77 >More info root cells stele standard 1 hour root cells stele Original data
20 whole roots 140 mM NaCl 1 hour 0.72 >More info 0.80 >More info whole roots standard Original data GEO bulk
21 root cells epidermis 140mM NaCl 48 hours 0.74 >More info 0.77 >More info root cells epidermis standard 1 hour root cells epidermis Original data
22 root cells epidermis 140mM NaCl 20 hours 0.73 >More info 0.77 >More info root cells epidermis standard 1 hour root cells epidermis Original data
23 root cells stele 140mM NaCl 48 hours 0.72 >More info 0.77 >More info root cells stele standard 1 hour root cells stele Original data
24 root longitudinal zone-3 NaCl 0.70 >More info 0.79 >More info root longitudinal zone-3 Original data GEO bulk
25 root cells endodermis 140mM NaCl 8 hours 0.77 >More info 0.68 >More info root cells endodermis standard 1 hour root cells endodermis Original data
26 root cells stele 140mM NaCl 20 hours 0.70 >More info 0.75 >More info root cells stele standard 1 hour root cells stele Original data
27 root cells endodermis 140mM NaCl 32 hours 0.74 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
28 root cells endodermis 140mM NaCl 48 hours 0.74 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
29 whole roots 140 mM NaCl 30 minutes 0.67 >More info 0.76 >More info whole roots standard Original data GEO bulk
30 root cells epidermis 140mM NaCl 32 hours 0.69 >More info 0.74 >More info root cells epidermis standard 1 hour root cells epidermis Original data
31 root cells endodermis 140mM NaCl 20 hours 0.71 >More info 0.66 >More info root cells endodermis standard 1 hour root cells endodermis Original data
32 ABA 3 h 0.66 >More info 0.69 >More info Mock 3 h Original data Basic hormone treatment of seedlings
33 root columella root cap 40 mM NaCl 0.66 >More info 0.66 >More info root columella root cap Original data GEO bulk
34 Osmotic Stress 24 h (root) 0.70 >More info 0.61 >More info Stress mock 24 h (root) Original data Stress treatments
35 rosettes myoox drought 0.60 >More info 0.67 >More info rosettes myoox watered Original data GEO bulk
36 rosettes WT drought 0.62 >More info 0.65 >More info rosettes WT watered Original data GEO bulk
37 root stele 40 mM NaCls 0.70 >More info 0.57 >More info root stele Original data GEO bulk
38 root cortex 40 mM NaCl 0.64 >More info 0.62 >More info root cortex Original data GEO bulk
39 root epidermis and lateral root cap 40 mM NaCl 0.63 >More info 0.63 >More info root epidermis and lateral root cap Original data GEO bulk
40 root longitudinal zone-2 NaCl 0.54 >More info 0.69 >More info root longitudinal zone-2 Original data GEO bulk
41 rosettes drought 0.61 >More info 0.61 >More info rosettes watered Original data GEO bulk
42 rosettes atx drought 0.55 >More info 0.65 >More info rosettes atx watered Original data GEO bulk
43 Col-0 0h NAA 0.53 >More info 0.66 >More info Col-0 6h MOCK Original data GEO bulk
44 6h +Pi -0.58 >More info -0.61 >More info 6h -Pi root Original data GEO bulk
45 Col-0 low oxygen 0.56 >More info 0.62 >More info Col-0 control low oxygen root Original data GEO bulk
46 line J1551-5 days control + 2 days salt s 0.55 >More info 0.63 >More info line J1551-7 days-control Original data
47 OXUPB1-2 meristematic zone 0.63 >More info 0.54 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
48 root stele pH4.6 0.59 >More info 0.58 >More info root stele pH5.7 Original data GEO bulk
49 root longitudinal zone-1 NaCl 0.45 >More info 0.72 >More info root longitudinal zone-1 Original data GEO bulk
50 ABA 1 h 0.54 >More info 0.62 >More info Mock 1 h Original data Basic hormone treatment of seedlings
51 C2 leaf-drought 0.51 >More info 0.64 >More info C2 leaf-well watered Original data GEO bulk
52 24h +Pi -0.58 >More info -0.56 >More info 24h -Pi root Original data GEO bulk
53 root BA 12h 0.54 >More info 0.58 >More info root control 12h boron (5mM) root Original data GEO bulk
54 whole roots 140 mM NaCl 16 hour 0.54 >More info 0.57 >More info whole roots standard Original data GEO bulk
55 bbx24 in Simulated Shade -0.55 >More info -0.53 >More info WT in simulated shade shade seedling Original data
56 ABA DFPM 0.61 >More info 0.47 >More info control Original data GEO bulk
57 afb3-1 2h KNO3 0.35 >More info 0.73 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
58 dicamba 0.61 >More info 0.46 >More info WT mock whole seedling Original data GEO bulk
59 Phytoprostane A1 4 h 0.48 >More info 0.59 >More info Col-0 Original data GEO bulk
60 5-Triiodobenzoic acid3 h 0.49 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
61 K starvation (root) 0.51 >More info 0.53 >More info Ws (root) Original data GEO bulk
62 Homozygous-AtcesA4 0.50 >More info 0.54 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
63 root Dosed gold 0.59 >More info 0.44 >More info root No gold .125 mM gold 24 h roots Original data
64 Root -K 0.51 >More info 0.52 >More info Control-root Original data GEO bulk
65 0.125 mM gold 24 h 0.59 >More info 0.44 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
66 root epidermis and lateral root cap pH4.6 0.48 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
67 phr1 Shoot-Pi 0.51 >More info 0.51 >More info WT Root-Pi shoots Original data GEO bulk
68 Osmotic Stress 24 h (shoot) 0.52 >More info 0.49 >More info Stress mock 24 h (shoot) Original data Stress treatments
69 WT 24H Cold 0.51 >More info 0.50 >More info WT control Original data GEO bulk
70 Anoxia 0.52 >More info 0.49 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
71 ABA SA 3h 0.48 >More info 0.53 >More info EtOH 3h 3hr Original data GEO bulk
72 WT leaf-drought 0.51 >More info 0.49 >More info WT leaf-well watered Original data GEO bulk
73 plant (tga2-5-6) 4h phytoprostane A1 0.33 >More info 0.67 >More info plant (tga2-5-6) 4h control Original data GEO bulk
74 Ws HS 0.34 >More info 0.66 >More info Ws control heat shocked seedling Original data GEO bulk
75 root endodermis and quiescent center pH4.6 0.46 >More info 0.54 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
76 WT (Col-0) inflorescence drought day 5 0.50 >More info 0.49 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
77 Salt Stress 24 h (root) 0.58 >More info 0.41 >More info Stress mock 24 h (root) Original data Stress treatments
78 Col-0 flu HL 3h 0.51 >More info 0.47 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
79 inhibitor B Treated 0.50 >More info 0.48 >More info Negative Control Original data GEO bulk
80 siliques AtHb1 control 0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
81 root cortex pH4.6 0.46 >More info 0.52 >More info root cortex pH5.7 Original data GEO bulk
82 WT H2O2 3h 0.45 >More info 0.53 >More info WT water 3h 3h_H2O2 Original data GEO bulk
83 DUO1 induced 24h 0.51 >More info 0.46 >More info 24hr-not-induced whole plant Original data GEO bulk
84 plant (Col-0) 4h phytoprostane A1 0.46 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
85 Col-0 drought 0.45 >More info 0.52 >More info Col-0 control Original data GEO bulk
86 whole roots 140 mM NaCl 32 hour 0.46 >More info 0.51 >More info whole roots standard Original data GEO bulk
87 WT 30μM arsenate 8 hours. 0.44 >More info 0.53 >More info WT control (not supplemented). Original data
88 Root dark control 7h 0.45 >More info 0.51 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
89 Seedling-HeatStressed POLYSOMESmRNA 0.40 >More info 0.54 >More info Seedling-control POLYSOMESmRNA seedling Original data
90 Homozygous-AtcesA6 0.43 >More info 0.51 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
91 Heat and anoxia 0.40 >More info 0.53 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
92 8hr-pH4.5 0.40 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
93 ABA 24h 0.50 >More info 0.43 >More info EtOH 24h 24hr Original data GEO bulk
94 TNT-seedlings 0.35 >More info 0.58 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
95 bri1-116 0.19 >More info 0.73 >More info Col seedling Original data GEO bulk
96 Fenclorim 4hr 0.51 >More info 0.40 >More info Acetone 4hr root Original data GEO bulk
97 ABA 0.5 h 0.39 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
98 AgNO3 3 h 0.37 >More info 0.54 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
99 whole roots -Fe 6 hour 0.35 >More info 0.56 >More info whole roots standard Original data GEO bulk
100 Root dark control 24h 0.40 >More info 0.51 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
101 T101D 10mM NH4NO3 -0.39 >More info -0.52 >More info col 10mM NH4NO3 Root Original data
102 Col0-PsmES4326-24hpi 0.30 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
103 Col-0 HS 0.31 >More info 0.60 >More info Col-0 control heat shocked seedling Original data GEO bulk
104 WT (Col-0) heat shock 0.31 >More info 0.60 >More info WT (Col-0) whole seedling Original data GEO bulk
105 root epidermis and lateral root cap -S 0.39 >More info 0.51 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
106 Whole root - low pH 12H 0.40 >More info 0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
107 NJ15 0.40 >More info 0.50 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
108 Heat 0.34 >More info 0.55 >More info Control 90 minutes at 38°C. Original data GEO bulk
109 Fenclorim 24hr 0.54 >More info 0.35 >More info Acetone 24hr root Original data GEO bulk
110 RRE1 Chitin 0.52 >More info 0.37 >More info Chitin Original data GEO bulk
111 Seedling-HeatStressed TOTALmRNA 0.37 >More info 0.52 >More info Seedling-control TOTALmRNA seedling Original data
112 Red/FR Light45min 0.20 >More info 0.68 >More info FarRed Light 45min Original data Light treatments
113 35S:VND7-VP16-GR+CHX -0.32 >More info -0.56 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
114 aux1 mutant roots ethylene 0.25 >More info 0.63 >More info roots air Original data GEO bulk
115 Leafminer damaged seedlings 0.31 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
116 Cs shoot -0.21 >More info -0.66 >More info control shoot Original data GEO bulk
117 root longitudinal zone-3 pH 4.6 0.32 >More info 0.54 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
118 Botrytis cinerea 48h 0.31 >More info 0.55 >More info control 48h Original data GEO bulk
119 roots IAA 0.30 >More info 0.56 >More info roots mock Original data GEO bulk
120 Col dryseed 0.54 >More info 0.28 >More info Control for tissue data dry seeds Original data
121 Col-0 37C 0.32 >More info 0.50 >More info Col-0 22C Original data GEO bulk
122 seed germinating in countinuous light 24h SL 0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
123 dark-hs 0.23 >More info 0.59 >More info dark-control seedling Original data
124 sex1-3 0.30 >More info 0.51 >More info Col-WT leaves Original data GEO bulk
125 toc1-1-85hr 0.24 >More info 0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
126 aphid infested 0.22 >More info 0.58 >More info control aphid infested Leaves Original data GEO bulk
127 aphid infested 0.22 >More info 0.58 >More info CTR Original data GEO bulk
128 Fe starvation 24 h 0.29 >More info 0.50 >More info Control Original data GEO bulk
129 whole roots -Fe 24hour 0.29 >More info 0.50 >More info whole roots standard Original data GEO bulk
130 toc1-1-81hr 0.24 >More info 0.55 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
131 Shoot apex inflorescence (after bolting) 0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
132 IMI 4mM 0.28 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
133 red illumination +lincomycin 0.10 >More info 0.68 >More info red illumination -lincomycin Original data GEO bulk
134 Heat shock optimum 0.12 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
135 roottip hypoxia total 0.22 >More info 0.54 >More info roottip control total Original data GEO bulk
136 Mutant axr3-1 (IAA) 0.23 >More info 0.50 >More info Col (IAA) Original data GEO bulk
137 CCA14 dark early 0.22 >More info 0.51 >More info Col dark early Original data GEO bulk
138 IAA 2h 0.20 >More info 0.52 >More info control 2h root Original data GEO bulk
139 Chemically 0.21 >More info 0.50 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
140 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
141 Col0 roots 2hr KNO3 nitrogen -0.12 >More info -0.58 >More info Col0 roots 2hr KCl control root Original data GEO bulk
142 shoots bhlh100/101 100uM Fe -0.12 >More info -0.56 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
143 toc1-1-73hr 0.15 >More info 0.52 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
144 Laer pretreat GA Flg22 1h -0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
145 toc1-1-53hr 0.14 >More info 0.50 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
146 shoot hypoxia pGL2 -0.12 >More info -0.51 >More info shoot hypoxia total Original data GEO bulk
147 EBE-XVE +estradiol 0.01 >More info 0.59 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
148 SA 24h 0.01 >More info -0.58 >More info EtOH 24h 24hr Original data GEO bulk
149 Polysomal RNA 35S:HF-RPL18 cold -0.02 >More info -0.50 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
150 vte2-1 1d vernalization -0.07 >More info 0.58 >More info WT 1d vernalization Original data GEO bulk
151 IAA7mII over-expressor IAA Treated -0.20 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
152 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
153 ABA 0.65 >More info -0.22 >More info control Original data GEO bulk