4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on petiole in D
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List of experiments correlated with "petiole in D"  Help Download transcriptome of top 30
Score Experiment Correlation from
petiole in D		 Correlation to
petiole in D		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 petiole in D 1.00 >More info 1.00 >More info petiole in WL petioles Original data GEO bulk
2 petiole in FRD 0.90 >More info 0.84 >More info petiole in WL petioles Original data GEO bulk
3 leaf blade in D 0.86 >More info 0.88 >More info leaf blade in WL leaf blades Original data GEO bulk
4 leaf blade in FRD 0.84 >More info 0.82 >More info leaf blade in WL leaf blades Original data GEO bulk
5 1 h Light Total RNA -0.74 >More info -0.82 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
6 tt4 0.78 >More info 0.78 >More info Col-0 aerial part Original data
7 M6PR transgenic leaf 0mM NaCl 0.76 >More info 0.76 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
8 pap1-D/tt4 0.79 >More info 0.72 >More info Col-0 aerial part Original data
9 MYB12OX/tt4 0.78 >More info 0.73 >More info Col-0 aerial part Original data
10 1 h Light IP RNA -0.73 >More info -0.75 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
11 mkk2 24h BTH rep 0.72 >More info 0.75 >More info Col-0 24h BTH rep Original data GEO bulk
12 low CO2 + dark 0.70 >More info 0.75 >More info normal CO2 + light Original data GEO bulk
13 Shoot submergence 24h 0.73 >More info 0.71 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
14 Col-0 9 hpi A. brassicicola 0.71 >More info 0.73 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
15 Night Time Treatment -0.70 >More info -0.72 >More info Night Time Control 1hr white light pulse aerial rosette Original data
16 WOX1-1 0.77 >More info 0.65 >More info Col-0 aerial part Original data
17 +1.6 mM Tween 20 1 h. 0.65 >More info 0.77 >More info +distilled water 1 h. Original data GEO bulk
18 Col-0 C2H4 24h 0.74 >More info 0.68 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
19 Col(gl) 0mM NaCl 0.73 >More info 0.68 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
20 Col(gl) leaf 0mM NaCl 0.73 >More info 0.68 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
21 ataf1-1 mutant Col-0 Bgh inoculated 0.70 >More info 0.69 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
22 Atss3 Light4 -0.74 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
23 rosette leaves fdh 0.69 >More info 0.69 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
24 Col ozone 3h 0.67 >More info 0.71 >More info Col clean-air 3h ozone Original data GEO bulk
25 Shoot dark control 7h 0.67 >More info 0.69 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
26 Pseudomonas 0.65 >More info 0.71 >More info Control pseudomonas treated whole seedling Original data GEO bulk
27 hrcC 0.69 >More info 0.66 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
28 pmr5 pmr6 0.71 >More info 0.63 >More info Col-0 Original data GEO bulk
29 ein2-1 9 hpi A. brassicicola 0.69 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
30 GST NPP1 4 h (leaf) 0.67 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
31 GST 4 h (leaf) 0.62 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
32 rGRF 0.65 >More info 0.67 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
33 camta1-2 0.65 >More info 0.67 >More info Col-0-WT Original data GEO bulk
34 E.coli TUV86 2 fliC 7h 0.61 >More info 0.71 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
35 04h Col-0 -0.61 >More info -0.71 >More info 00h Col-0 Original data GEO bulk
36 60m light -0.57 >More info -0.75 >More info before light whole seedlings Original data GEO bulk
37 shoot-10 μM DEX- 6 hr 0.65 >More info 0.66 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
38 edr1 36 h powdery mildew 0.67 >More info 0.64 >More info Col-0 36 h powdery mildew Original data GEO bulk
39 seedlings-week-old RECA1-overexpressing
transgenic		 0.67 >More info 0.64 >More info seedlings-week-old Col-0 seedlings Original data
40 hrpA 7h 0.65 >More info 0.66 >More info Mock 7h hrpA Original data GEO bulk
41 cpr5scv1 0.67 >More info 0.63 >More info WT(COL) Original data GEO bulk
42 M6PR transgenic 0mM NaCl 0.68 >More info 0.62 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
43 WT hypoxia 0.65 >More info 0.65 >More info WT normoxia whole rosette Original data
44 Flagellin 4 h (leaf) 0.67 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
45 Shoot dark control 24h 0.59 >More info 0.71 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
46 pap1-D 0.72 >More info 0.57 >More info Col-0 aerial part Original data
47 30m light -0.55 >More info -0.74 >More info before light whole seedlings Original data GEO bulk
48 bHLH122 ox -0.62 >More info -0.67 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
49 col-5 hrpA 12h 0.62 >More info 0.67 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
50 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.76 >More info 0.52 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
51 anac017-2 AntimycinA 3h -0.63 >More info -0.65 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
52 WT Col-0 Bgh inoculated 0.65 >More info 0.63 >More info WT Col-0 Un-inoculated Original data GEO bulk
53 8h-DC3000 avrRpm1 0.57 >More info 0.71 >More info 8h-DC3000 leaves Original data GEO bulk
54 E.coli 0157 H7 7h 0.56 >More info 0.71 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
55 Day Time Treatment -0.62 >More info -0.65 >More info Day Time Control 1hr white light pulse aerial rosette Original data
56 Col whole leaf 7dpi 0.65 >More info 0.62 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
57 mkk1 24h BTH rep 0.65 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
58 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.76 >More info 0.51 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
59 mkk1/mkk2 control rep 0.69 >More info 0.58 >More info Col-0 Time 0 rep Original data GEO bulk
60 mutant acs9B (single mutant) 0.67 >More info 0.59 >More info col control (single mutant) Original data GEO bulk
61 pepr1-1 Pepr2-3 +Pep2 2h -0.65 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
62 coi1-16 ein2 sid2 ctrl -0.77 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
63 Col whole leaf 5dpi 0.61 >More info 0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
64 35S::ERF104 Flg22 4h 0.65 >More info 0.61 >More info 35S::ERF104 H2O 4h Original data GEO bulk
65 flu over-tAPX 0.64 >More info 0.62 >More info WT Col Original data GEO bulk
66 ERF96OE 0.66 >More info 0.59 >More info WT leaf Original data
67 MYB12OX 0.71 >More info 0.54 >More info Col-0 aerial part Original data
68 SA 4mM 0.64 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
69 CT101 ozone 0.76 >More info 0.48 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
70 WT Bc inoculation 14h 0.73 >More info 0.51 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
71 low CO2 + light 0.57 >More info 0.67 >More info normal CO2 + light Original data GEO bulk
72 CMV-A2b mutant 0.65 >More info 0.59 >More info Mock-At Aerial tissues Original data GEO bulk
73 mbd4 mutant thaliana 10-day-old seedling 0.70 >More info 0.53 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
74 CMV-WT 0.62 >More info 0.61 >More info Mock-At Aerial tissues Original data GEO bulk
75 mbd6 mutant thaliana 10-day-old seedling 0.68 >More info 0.55 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
76 ceh1 mutant 0.68 >More info 0.55 >More info Parent line Original data
77 Col-0 ozone 0.76 >More info 0.47 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
78 Col BTH 0.55 >More info 0.67 >More info Col rosettes Original data GEO bulk
79 mkk1/mkk2 24h BTH rep 0.68 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
80 leaf rlt1-1rlt2-1 -0.63 >More info -0.59 >More info leaf Col-0 leaf Original data GEO bulk
81 E.orontii Infection 3 day 0.51 >More info 0.70 >More info Uninfection 3 day Original data Elicitor treatments
82 UV Stress 24 h (shoot) 0.64 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
83 Te ozone 0.75 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
84 Col-Luc WT 3h antimycin A 0.61 >More info 0.60 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
85 sfr2 control -0.65 >More info -0.56 >More info WT control All aerial tissue Original data GEO bulk
86 flu 0.63 >More info 0.57 >More info WT Col Original data GEO bulk
87 cpr5npr1svi1 0.59 >More info 0.61 >More info WT(COL) Original data GEO bulk
88 pmr5 0.62 >More info 0.58 >More info Col-0 Original data GEO bulk
89 aerial organ callus inducing medium 12 h 0.58 >More info 0.61 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
90 Col(gl) leaf 100mM NaCl 0.62 >More info 0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
91 hrpA fliC 7h 0.64 >More info 0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
92 mkk2 control rep 0.63 >More info 0.56 >More info Col-0 Time 0 rep Original data GEO bulk
93 Col(gl) 100mM NaCl 0.62 >More info 0.57 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
94 detached inflorescences 24h 0.55 >More info 0.63 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
95 bio4-1 mutant leaves 0.62 >More info 0.56 >More info WT leaves leaves Original data GEO bulk
96 Col0-PsmES4326-24hpi 0.57 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
97 Elevated CO2 AMPLE N NIGHT 0.58 >More info 0.59 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
98 mutant acs2C (single mutant) 0.61 >More info 0.56 >More info col control (single mutant) Original data GEO bulk
99 coi1-16 ein2 sid2 ozone 0.76 >More info 0.41 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
100 sid2-2 9 hpi A. brassicicola 0.64 >More info 0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
101 Col-0-avrB-6h 0.58 >More info 0.59 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
102 sfr6 drought -0.48 >More info -0.69 >More info WT drought All aerial tissue Original data GEO bulk
103 Leafminer locally damaged thaliana seedlings 0.60 >More info 0.56 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
104 Leafminer damaged seedlings 0.60 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
105 pnp1-1 3h +P 0.66 >More info 0.50 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
106 seedlings protease IV 0.65 >More info 0.51 >More info seedlings nontreated control whole seedling Original data
107 rosette leaves lcr 0.65 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
108 12h volatiles Sm. R3089 0.57 >More info 0.59 >More info 12h untreated whole seedling Original data GEO bulk
109 pvip1 pvip2 0.58 >More info 0.58 >More info Col-0 whole rosettes Original data GEO bulk
110 fls1-3 0.63 >More info 0.52 >More info Col-0 Rosette leaves Original data
111 shl-2 Pool 0.57 >More info 0.58 >More info Ler Pool seedling Original data GEO bulk
112 Col-0 low oxygen 0.64 >More info 0.51 >More info Col-0 Original data GEO bulk
113 Cor hrpS 10h 0.64 >More info 0.51 >More info Mock 10h Cor hrpS Original data GEO bulk
114 Heat shock optimum 0.50 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
115 6h volatiles Sm. R3089 0.43 >More info 0.72 >More info 6h untreated whole seedling Original data GEO bulk
116 WT 2-4h Xanthomonas 0.54 >More info 0.60 >More info WT T0 Original data GEO bulk
117 seedling 1.5h after HZE atm-1 0.54 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
118 cs26 long day 0.63 >More info 0.51 >More info Leaves-WT-LD leaf Original data GEO bulk
119 Lipopolysaccaride4 h (leaf) 0.57 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
120 Col-0 +lincomycin 0.53 >More info 0.60 >More info Col-0 -lincomycin Original data GEO bulk
121 ebs Pool 0.53 >More info 0.60 >More info Ler Pool seedling Original data GEO bulk
122 mil4 0.64 >More info 0.49 >More info Col rosettes Original data GEO bulk
123 Myzus persicae saliva 0.52 >More info 0.61 >More info Control Original data GEO bulk
124 cs26 short-day -0.63 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
125 aphid saliva treated 0.52 >More info 0.61 >More info control aphid saliva treated leaves Original data GEO bulk
126 OsSAP11 expressing -0.58 >More info -0.55 >More info WT seedlings Original data GEO bulk
127 sid2-1 cold -0.53 >More info -0.60 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
128 Nicotinamide-69hr 0.58 >More info 0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
129 Nicotinamide-73hr 0.59 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
130 Col-0 DEX Shade 0.55 >More info 0.56 >More info Col-0 DEX WL seedlings Original data
131 gpa1-4/agb1-2 ozone 2d -0.34 >More info -0.77 >More info Col ozone 2d ozone Original data GEO bulk
132 Nicotinamide-93hr 0.54 >More info 0.57 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
133 sni1 0.54 >More info 0.57 >More info WT Original data GEO bulk
134 C24 ozone 0.73 >More info 0.38 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
135 phyB mutant 16C 10hrs -0.59 >More info -0.52 >More info 16C 10h whole plant excluding roots Original data GEO bulk
136 sfr6 control -0.59 >More info -0.52 >More info WT control All aerial tissue Original data GEO bulk
137 4d red light grown hmr-5 seedlings 0.54 >More info 0.57 >More info 4d red light grown WT(Col-0) seedlings Original data
138 edr1 18 h powdery mildew 0.57 >More info 0.54 >More info Col-0 18 h powdery mildew Original data GEO bulk
139 wrky33 Bc inoculation 14h 0.68 >More info 0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
140 Mutant coi1(leaf) -0.60 >More info -0.50 >More info Col-0 (leaf) Original data GEO bulk
141 shoot-10 μM DEX- 12 hr 0.52 >More info 0.58 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
142 camta1 leaf water 0.56 >More info 0.54 >More info Col-0 leaf water leaf Original data GEO bulk
143 erf104-ko Flg22 4h 0.56 >More info 0.54 >More info erf104-ko H2O 4h Original data GEO bulk
144 Laer Flg22 2h 0.53 >More info 0.57 >More info Laer Control leaf discs Original data GEO bulk
145 WT AntimycinA 3h 0.54 >More info 0.56 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
146 WT 3h -P 0.54 >More info 0.55 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
147 ice1 6H Cold 0.50 >More info 0.59 >More info WT 6H Cold Original data GEO bulk
148 rosette Light Wounded 0.57 >More info 0.52 >More info rosette Light Control Original data GEO bulk
149 myb3 myb3r4d 0.51 >More info 0.58 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
150 RGA-GR-DEX 0.49 >More info 0.60 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
151 sid2 0.57 >More info 0.51 >More info Col rosettes Original data GEO bulk
152 Light 4h steady-state -0.55 >More info -0.53 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
153 Laer pretreat GA Flg22 1h 0.37 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
154 AFB1 flg22 2h 0.49 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
155 miR393 flg22 2h 0.52 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
156 CAX1/CAX3 mutant 0.63 >More info 0.44 >More info Col whole plant Original data GEO bulk
157 flu dark 8hours/30 minute light 0.51 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
158 Elevated CO2 expanding leaf 0.53 >More info 0.54 >More info Ambient CO2 expanding leaf expanding leaf Original data
159 aerial organ callus inducing medium 24h 0.53 >More info 0.54 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
160 mil4 sid2 0.57 >More info 0.50 >More info Col rosettes Original data GEO bulk
161 Nicotinamide-53hr 0.50 >More info 0.57 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
162 aerial organ callus inducing medium 96 h 0.50 >More info 0.57 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
163 msh1 albino 0.52 >More info 0.54 >More info WT aerial part Original data GEO bulk
164 P.p 10.5hai 0.59 >More info 0.47 >More info At-Control roots Original data GEO bulk
165 Red Light 4 h 0.51 >More info 0.55 >More info White Light 4 h Original data Light treatments
166 tunicamycin -0.65 >More info -0.41 >More info DMF Original data GEO bulk
167 aerial organ callus inducing medium 48 h 0.54 >More info 0.52 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
168 HopZ1a treated 0.49 >More info 0.57 >More info col Original data GEO bulk
169 Sulfometuron EC50 0.49 >More info 0.57 >More info Carrier Original data GEO bulk
170 ein5-1 ski2-3 0.51 >More info 0.54 >More info Col-0 aerial tissue Original data
171 Light 4h polysome-bound -0.54 >More info -0.51 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
172 AgNO3 3 h 0.64 >More info 0.41 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
173 col-5 DC3000 12h 0.50 >More info 0.55 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
174 WT (Col) glucose -0.44 >More info -0.61 >More info WT (Col) glucose seedlings Original data GEO bulk
175 GO5; 8h switch to ambient CO2 concentrations; 0.44 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
176 shoots bhlh100/101 0uM Fe 0.52 >More info 0.52 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
177 Root submergence 7h 0.52 >More info 0.52 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
178 ACC 3 h 0.44 >More info 0.60 >More info Mock 3 h Original data Basic hormone treatment of seedlings
179 Uniconazole 12 h 0.49 >More info 0.55 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
180 sfr3 cold 0.47 >More info 0.57 >More info WT-cold aerial tissues Original data GEO bulk
181 Pst-DC3000(avrRpm1)-4hpi 0.46 >More info 0.58 >More info Pst-DC3000-4hpi Original data GEO bulk
182 ice1 3H Cold 0.52 >More info 0.51 >More info WT 3H Cold Original data GEO bulk
183 wavy 0.59 >More info 0.44 >More info WT Original data GEO bulk
184 Atss3 Light1 -0.58 >More info -0.45 >More info Atss3 Dark0.5 Original data GEO bulk
185 seedling 1.5h after HZE WT 0.54 >More info 0.49 >More info seedling day 1 unirradiated WT 1.5h Original data
186 Col-0 norflurazon 0.55 >More info 0.48 >More info Col-0 control Original data GEO bulk
187 efr-1 +elf18 10h -0.54 >More info -0.49 >More info WT +elf18 10h elf18 Original data GEO bulk
188 mpk6-ko Flg22 4h 0.53 >More info 0.50 >More info mpk6-ko H2O 4h Original data GEO bulk
189 IMI 4mM 0.58 >More info 0.45 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
190 E.orontii Infection 6 h 0.44 >More info 0.59 >More info Uninfection 6 h Original data Elicitor treatments
191 SCR-GR Time 1H Dex 0.48 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
192 seedling 24h after Gamma atm-1 -0.42 >More info -0.61 >More info seedling day 2 unirradiated atm-1 24h Original data
193 6h volatiles Sp. HRO-C48 0.53 >More info 0.49 >More info 6h untreated whole seedling Original data GEO bulk
194 P.p 6hai 0.58 >More info 0.44 >More info At-Control roots Original data GEO bulk
195 dde2-2 9 hpi A. brassicicola 0.59 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
196 mil4 BTH 0.61 >More info 0.41 >More info Col BTH rosettes Original data GEO bulk
197 vtc2 (I) 0.55 >More info 0.47 >More info Col (I) rosette Original data GEO bulk
198 ice1 control 0.53 >More info 0.48 >More info WT control Original data GEO bulk
199 WT NAA/flg 2h 0.53 >More info 0.48 >More info WT 0h Leaf tissue Original data GEO bulk
200 cpr5npr1 0.57 >More info 0.44 >More info WT(COL) Original data GEO bulk
201 WT cold 0.53 >More info 0.48 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
202 Root submergence 24h 0.52 >More info 0.49 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
203 Elevated CO2 AMPLE N DAY 0.61 >More info 0.40 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
204 TNT-seedlings 0.59 >More info 0.42 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
205 Seedling-HeatStressed TOTALmRNA 0.54 >More info 0.47 >More info Seedling-control TOTALmRNA seedling Original data
206 Te 1d 0.48 >More info 0.53 >More info Te CA Leaves Original data
207 WT+H2O2 0.55 >More info 0.45 >More info WT H2O2 Original data GEO bulk
208 npr1 sni1 ssn2 -0.54 >More info -0.46 >More info npr1 sni1 water water seedling Original data GEO bulk
209 rGRF3x35S:GIF 0.56 >More info 0.44 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
210 HopZ1a treated ulp1c ulp1d 0.46 >More info 0.54 >More info col Original data GEO bulk
211 atmyc2 Seedling BL+ABA -0.41 >More info -0.59 >More info WT Seedling BL+ABA Original data GEO bulk
212 MIL4 ox 0.56 >More info 0.43 >More info Col Original data GEO bulk
213 35S:RPS4 eds1-2 8h -0.51 >More info -0.48 >More info 35S:RPS4 8h leaves Original data
214 ice1 24H Cold 0.49 >More info 0.50 >More info WT 24H Cold Original data GEO bulk
215 oligomycin 4 h 0.53 >More info 0.45 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
216 Col-0 DCA 6d 0.57 >More info 0.41 >More info Col-0 MOCK 6d Original data GEO bulk
217 Nicotinamide-49hr 0.51 >More info 0.47 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
218 Dark 6h ivd 0.54 >More info 0.44 >More info 0h ivd Original data
219 Laer treat paclobutrazol (PAC) 0.54 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
220 S15-118 0.57 >More info 0.41 >More info wt Original data GEO bulk
221 FLIGHT TAGESB plate6 SHOOTS 0.56 >More info 0.42 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
222 Drought Stress 24 h (shoot) 0.43 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
223 12h-DC3000 avrRpm1 0.35 >More info 0.63 >More info 12h-DC3000 leaves Original data GEO bulk
224 Nicotinamide-89hr 0.45 >More info 0.53 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
225 pip3 At2g19270 TDNA 9 0.41 >More info 0.57 >More info Col-0 whole plant Original data GEO bulk
226 dense canopy 0.42 >More info 0.56 >More info single (control) petiole Original data GEO bulk
227 sav1-1 light 0.46 >More info 0.52 >More info Col-0 light seedlings Original data GEO bulk
228 3x(p) 0.38 >More info 0.60 >More info 2x two week old seedlings Original data
229 TaFLS overexpression line (OE2) 0.48 >More info 0.50 >More info Col-0 Rosette leaves Original data
230 AvrRpt2 Col-0 6hpi 0.55 >More info 0.42 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
231 Laer Flg22+GA 2h 0.53 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
232 35S:GIF 0.57 >More info 0.40 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
233 C24 24h cold -0.59 >More info -0.38 >More info Col 24h cold leaf Original data GEO bulk
234 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.42 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
235 agb1 gpa1 -ABA GC -0.43 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
236 FAMA induced 4h -0.37 >More info -0.60 >More info control 4h Whole seedling Original data GEO bulk
237 ORS1 induced 0.47 >More info 0.50 >More info mock-induced rosette leaves Original data GEO bulk
238 gun1-1 +lincomycin -0.43 >More info -0.54 >More info Col-0 +lincomycin Original data GEO bulk
239 A. thaliana-A. lyrata hybrid -0.44 >More info -0.53 >More info A. thaliana mature leaves before flowering Original data GEO bulk
240 WT +elf18 2h 0.53 >More info 0.43 >More info WT untreated elf18 Original data GEO bulk
241 Elevated CO2 fully expanded leaf 0.53 >More info 0.43 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
242 pho1 0.58 >More info 0.38 >More info Col2WT Original data GEO bulk
243 aba3-1 0.55 >More info 0.41 >More info wt Original data GEO bulk
244 scrm-D 0.53 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
245 camta1/2/3 warm 0.52 >More info 0.44 >More info WT warm entire aerial part Original data GEO bulk
246 CMP 4hr 0.46 >More info 0.50 >More info Acetone 4hr root Original data GEO bulk
247 Chitosan 3h Treatment 0.56 >More info 0.39 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
248 Rsch 3d 0.40 >More info 0.55 >More info Rsch CA Leaves Original data
249 del1-1 mutant 5d uninfected 0.59 >More info 0.36 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
250 35S:RPS4 eds1-2 24h -0.50 >More info -0.45 >More info 35S:RPS4 24h leaves Original data
251 npr1 sni1 SA 0.64 >More info 0.31 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
252 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.64 >More info -0.31 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
253 Leafminer systemically damaged thaliana seedlings 0.51 >More info 0.44 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
254 DFPM 0.41 >More info 0.54 >More info control Original data GEO bulk
255 WT seedlings NaCl -0.51 >More info -0.43 >More info WT seedlings control Seedlings Original data GEO bulk
256 Seedling-HeatStressed POLYSOMESmRNA 0.52 >More info 0.42 >More info Seedling-control POLYSOMESmRNA seedling Original data
257 aba2 1% sucrose 12-day-old 0.75 >More info 0.19 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
258 ADD3 -0.36 >More info -0.58 >More info WT aerial part Original data GEO bulk
259 TA induced 0.38 >More info 0.55 >More info Methanol TA Suspension cells Original data GEO bulk
260 24h light (+Lincomycin) 0.38 >More info 0.55 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
261 sfr3 cold 0.38 >More info 0.55 >More info WT cold All aerial tissue Original data GEO bulk
262 pad4-PsmES4326-24hpi -0.50 >More info -0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
263 Dark 3day ivd 0.51 >More info 0.42 >More info 0h ivd Original data
264 gh3.5D uninoculated -0.51 >More info -0.42 >More info Col-0 48 hpi Original data GEO bulk
265 eds16 whole leaf 6hpi -0.41 >More info -0.52 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
266 ulp1c ulp1d +Pto 0.41 >More info 0.52 >More info ulp1c ulp1d mock Original data GEO bulk
267 Mutant siz1-3 (Drought) 0.52 >More info 0.40 >More info Col-0 (Drought) Original data GEO bulk
268 Cycloheximide 3 h 0.53 >More info 0.39 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
269 siz1-3 drought 0.52 >More info 0.40 >More info Col-0 drought Original data GEO bulk
270 Wounding Stress3 h (shoot) 0.39 >More info 0.53 >More info Stress mock 3 h (shoot) Original data Stress treatments
271 Col-0 48 hpi 0.50 >More info 0.42 >More info Col-0 uninoculated Original data GEO bulk
272 oas-a1.1 root -0.30 >More info -0.62 >More info WT-Untreated Root Original data GEO bulk
273 Nicotinamide-77hr 0.42 >More info 0.50 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
274 Col-0 INA 6d 0.52 >More info 0.39 >More info Col-0 MOCK 6d Original data GEO bulk
275 cpr5 0.51 >More info 0.40 >More info WT seedling Original data GEO bulk
276 4h decapitation -0.28 >More info -0.63 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
277 gun4-1 0.40 >More info 0.51 >More info WT Col-0 seedling Original data GEO bulk
278 xyl-grown cell culture- 1h 1mM Fru -0.24 >More info -0.67 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
279 penta Alternaria 3dpi 0.41 >More info 0.50 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
280 Dark 4 h pls UV-A 5 min -0.39 >More info -0.51 >More info Dark 4 h Original data Light treatments
281 low R/FR JA spray 0.39 >More info 0.51 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
282 Light 3day wt -0.57 >More info -0.33 >More info 0h wt Original data
283 Col leaf 100mM NaCl 0.50 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
284 Col leaf 100mM NaCl 0.50 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
285 Col 100mM NaCl 0.50 >More info 0.39 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
286 Norflurazon 0.39 >More info 0.50 >More info Col-0 Original data GEO bulk
287 Norflurazon 0.39 >More info 0.50 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
288 abh1 -ABA 0.37 >More info 0.52 >More info Col-0 -ABA Original data GEO bulk
289 del1-1 5dpi 0.58 >More info 0.31 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
290 Laer Flg22 1h 0.52 >More info 0.36 >More info Laer Control leaf discs Original data GEO bulk
291 atmospheric CO2 low Mg shoot 0.51 >More info 0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
292 3x(m) 0.38 >More info 0.50 >More info 2x two week old seedlings Original data
293 Te 3d 0.37 >More info 0.51 >More info Te CA Leaves Original data
294 camta3-1 0.55 >More info 0.32 >More info WT Original data GEO bulk
295 npr1 0.54 >More info 0.33 >More info WT(COL) Original data GEO bulk
296 gpa1 -ABA GC -0.31 >More info -0.56 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
297 CLO 4mM 0.66 >More info 0.21 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
298 nbp35-3/- 0.59 >More info 0.28 >More info WT whole seedling Original data GEO bulk
299 pnp1-1 1wk -P 0.53 >More info 0.33 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
300 miR mutant (higher order mutant) 0.53 >More info 0.33 >More info col control (higher order mutant) Original data GEO bulk
301 R. solani AG8 0.54 >More info 0.32 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
302 sex1-3 0.32 >More info 0.54 >More info Col-WT leaves Original data GEO bulk
303 Shoot -Cs 0.34 >More info 0.52 >More info Control-shoot Original data GEO bulk
304 exo70A1 0.53 >More info 0.32 >More info Col-0 whole plant Original data GEO bulk
305 bak1-3 +Pep2 10h 0.34 >More info 0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
306 DC3000 7h 0.31 >More info 0.54 >More info Mock 7h DC3000 Original data GEO bulk
307 vte1-1 3d vernalization -0.50 >More info -0.35 >More info WT 3d vernalization Original data GEO bulk
308 WT +Pep2 2h 0.50 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
309 mp-B4149 mutant IAA -0.50 >More info -0.35 >More info GR-bdl IAA Original data GEO bulk
310 shoots bhlh100/101 100uM Fe 0.63 >More info 0.22 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
311 WT roots - Fe 0.53 >More info 0.31 >More info WT roots + Fe Roots Original data GEO bulk
312 ABA 1 h -0.26 >More info -0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
313 seedling 24h after Gamma WT -0.29 >More info -0.53 >More info seedling day 2 unirradiated WT 24h Original data
314 mkk1 control rep 0.61 >More info 0.21 >More info Col-0 Time 0 rep Original data GEO bulk
315 rpl24 total 0.52 >More info 0.29 >More info WT total seedling shoot/aerial seedling Original data
316 P.p 30hai 0.50 >More info 0.31 >More info At-Control roots Original data GEO bulk
317 toc1-1-77hr 0.56 >More info 0.24 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
318 Mutant arf2-6 -0.51 >More info -0.29 >More info Col Original data GEO bulk
319 DUO1 induced 6h -0.51 >More info -0.29 >More info 6hr-not-induced whole plant Original data GEO bulk
320 35:SUB1A 0.50 >More info 0.30 >More info WT whole seedling Original data GEO bulk
321 pmr5 0.50 >More info 0.30 >More info Col-0 rosette Original data GEO bulk
322 oas-a1.1 shoot -0.51 >More info -0.29 >More info WT-Untreated Shoot Original data GEO bulk
323 Col-0 Mock Shade 0.59 >More info 0.21 >More info Col-0 Mock WL seedlings Original data
324 light -0.61 >More info -0.18 >More info dark light seedling Original data GEO bulk
325 toc1-1-53hr 0.50 >More info 0.28 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
326 35S:RPS4 rrs1-11 2h 0.56 >More info 0.20 >More info 35S:RPS4 2h leaves Original data
327 Shoot submergence 7h 0.76 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
328 P.p 2.5hai 0.52 >More info 0.24 >More info At-Control roots Original data GEO bulk
329 gai Control 0.52 >More info 0.24 >More info Laer Control leaf discs Original data GEO bulk
330 upf3 0.23 >More info 0.52 >More info WT whole plant Original data GEO bulk
331 Shoot P recovery 0.53 >More info 0.21 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
332 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
333 24h volatiles Sm. R3089 0.22 >More info 0.52 >More info 24h untreated whole seedling Original data GEO bulk
334 cat2-2; 8h switch to ambient CO2 concentrations; 0.23 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
335 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
336 ABA JA 24h 0.05 >More info 0.67 >More info EtOH 24h 24hr Original data GEO bulk
337 Aerobic prt6 0.52 >More info 0.20 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
338 noa1-2 0.53 >More info 0.17 >More info Col-0 whole seedlings Original data GEO bulk
339 Got7 UV 0.17 >More info 0.53 >More info Got7 mock UV seedling Original data
340 Total RNA 35S:HF-RPL18 cold 0.16 >More info 0.51 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
341 atr mock 0.55 >More info 0.11 >More info WT mock shoot apical meristem Original data
342 12m.KNO3 0.14 >More info 0.52 >More info To. KNO3 14 day old Roots Original data GEO bulk
343 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
344 HairpinZ 4 h (leaf) 0.69 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
345 agb1 -ABA LF 0.08 >More info 0.58 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
346 phyB mutant 16C 4hrs 0.56 >More info 0.09 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
347 pif4pif5 mut dark -0.07 >More info -0.58 >More info WT dark Original data GEO bulk
348 glk1 glk2 GLK1-GR +DEX 24h -0.50 >More info -0.14 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
349 AVG 3 h -0.14 >More info -0.50 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
350 ABA 0.5 h -0.11 >More info -0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
351 Truncated AC2 T2 -0.50 >More info -0.11 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
352 Constans-mutant 0.52 >More info 0.08 >More info Col control above-ground whole plant Original data GEO bulk
353 seedling 3h after HZE WT 0.58 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
354 Light 3day hml -0.56 >More info -0.02 >More info 0h hml Original data
355 FLIGHT TAGESB plate 0.50 >More info 0.07 >More info GROUND CONTROL TAGESB plate Original data
356 bri1-116 -0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
357 P. infestans 6 h (leaf) 0.67 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
358 pvip1 pvip2 seedling 0.51 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
359 Shoot apex inflorescence (after bolting) -0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
360 Mutant pif1-2 (Dark etiol) -0.06 >More info 0.51 >More info Col-0 (Dark etiol) Original data GEO bulk
361 pif1-2 dark -0.06 >More info 0.51 >More info Wt dark Original data GEO bulk
362 Blue Light 45 min -0.11 >More info 0.55 >More info White Light 45min Original data Light treatments
363 Col PSTDC3000 24h 0.56 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
364 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
365 ARR22-ox -0.58 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings