4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cortex pH4.6
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List of experiments correlated with "root cortex pH4.6"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cortex pH4.6		 Correlation to
root cortex pH4.6		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cortex pH4.6 1.00 >More info 1.00 >More info root cortex pH5.7 Original data GEO bulk
2 root endodermis and quiescent center pH4.6 0.78 >More info 0.81 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
3 root epidermis and lateral root cap pH4.6 0.77 >More info 0.76 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
4 root stele pH4.6 0.77 >More info 0.75 >More info root stele pH5.7 Original data GEO bulk
5 root columella root cap pH4.6 0.70 >More info 0.59 >More info root columella root cap pH5.7 Original data GEO bulk
6 root cells cortex 140mM NaCl 20 hours 0.76 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
7 Whole root - low pH 12H 0.61 >More info 0.67 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
8 root cells cortex 140mM NaCl 32 hours 0.72 >More info 0.54 >More info root cells cortex standard 1 hour root cells cortex Original data
9 35S::PI ap3-3 35S::AP-GR +DEX 0.55 >More info 0.71 >More info 0hr DEX Original data GEO bulk
10 root cells cortex 140mM NaCl 8 hours 0.70 >More info 0.53 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root stele -S 0.66 >More info 0.55 >More info root stele pH5.7 Original data GEO bulk
12 ahg2-1sid2-2 0.52 >More info 0.65 >More info WT (Col) control Original data GEO bulk
13 root cells cortex 140mM NaCl 3 hours 0.67 >More info 0.50 >More info root cells cortex standard 1 hour root cells cortex Original data
14 msh1 recA3 untreated 0.45 >More info 0.71 >More info WT untreated above-ground parts Original data GEO bulk
15 root cells epidermis 140mM NaCl 3 hours 0.60 >More info 0.55 >More info root cells epidermis standard 1 hour root cells epidermis Original data
16 Whole root - low pH 24H 0.59 >More info 0.54 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
17 cdpk6-yfp 0.55 >More info 0.58 >More info Kan seedlings Original data GEO bulk
18 SCR 72hr-S 0.56 >More info 0.57 >More info SCR 0hr endodermis Original data
19 SCR 96hr-S 0.55 >More info 0.57 >More info SCR 0hr endodermis Original data
20 prors1-2 leaves 0.52 >More info 0.58 >More info Col-0 leaves leaves Original data
21 root cells cortex 140mM NaCl 48 hours 0.69 >More info 0.40 >More info root cells cortex standard 1 hour root cells cortex Original data
22 bri1-116 0.36 >More info 0.73 >More info Col seedling Original data GEO bulk
23 Imidazolinone EC50 0.57 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
24 Norflurazon 0.56 >More info 0.52 >More info Col-0 Original data GEO bulk
25 root longitudinal zone-4 pH 4.6 0.51 >More info 0.57 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
26 Norflurazon 0.56 >More info 0.52 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
27 root longitudinal zone-3 pH 4.6 0.50 >More info 0.58 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
28 root cells epidermis 140mM NaCl 48 hours 0.58 >More info 0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
29 UV 0.59 >More info 0.47 >More info WT aerial region Original data GEO bulk
30 root cells epidermis 140mM NaCl 20 hours 0.59 >More info 0.46 >More info root cells epidermis standard 1 hour root cells epidermis Original data
31 GO5; 8h switch to ambient CO2 concentrations; 0.53 >More info 0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
32 upb1-1 elongation zone -0.53 >More info -0.51 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
33 bbx24 in Simulated Shade -0.40 >More info -0.64 >More info WT in simulated shade shade seedling Original data
34 root cells epidermis 140mM NaCl 8 hours 0.56 >More info 0.47 >More info root cells epidermis standard 1 hour root cells epidermis Original data
35 ahg2-1 0.51 >More info 0.52 >More info WT (Col) control Original data GEO bulk
36 QC pSCR 8h BL -0.52 >More info -0.51 >More info QC pSCR 0h BL brassinosteroid root Original data
37 Tsu -Fe 24h Roots 0.54 >More info 0.49 >More info Tsu +Fe 24h Roots Original data GEO bulk
38 Tsu-1 -Fe 24h 0.54 >More info 0.49 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
39 red illumination +lincomycin 0.43 >More info 0.60 >More info red illumination -lincomycin Original data GEO bulk
40 SCR 48hr-S 0.47 >More info 0.56 >More info SCR 0hr endodermis Original data
41 etiolated cop1BBX22-GFPox 0.67 >More info 0.35 >More info etiolated Col-0 whole seedlings Original data GEO bulk
42 Root -Cs 0.61 >More info 0.41 >More info Control-root Original data GEO bulk
43 root cells endodermis 140mM NaCl 3 hours 0.54 >More info 0.48 >More info root cells endodermis standard 1 hour root cells endodermis Original data
44 root cells epidermis 140mM NaCl 32 hours 0.53 >More info 0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
45 csn5 (csn5a-2 csn5b) dark 0.59 >More info 0.41 >More info WT dark Original data GEO bulk
46 Cocultivation 8 hrs root 0.47 >More info 0.53 >More info Mock cocultivation 8 hrs root Root Original data
47 Col-0 low oxygen 0.56 >More info 0.43 >More info Col-0 control low oxygen root Original data GEO bulk
48 noa1-2 0.54 >More info 0.45 >More info Col-0 whole seedlings Original data GEO bulk
49 atgsnor1-3-avrB-6h 0.60 >More info 0.39 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
50 root cells stele 140mM NaCl 32 hours 0.59 >More info 0.39 >More info root cells stele standard 1 hour root cells stele Original data
51 root cells cortex 140mM NaCl 1 hour 0.52 >More info 0.46 >More info root cells cortex standard 1 hour root cells cortex Original data
52 Primisulfuron EC50 0.57 >More info 0.40 >More info Carrier (primisulfuron) Original data GEO bulk
53 Sulfometuron EC50 0.60 >More info 0.37 >More info Carrier Original data GEO bulk
54 sta1 0.56 >More info 0.40 >More info WT Original data GEO bulk
55 root cells endodermis 140mM NaCl 48 hours 0.56 >More info 0.40 >More info root cells endodermis standard 1 hour root cells endodermis Original data
56 Leaf GLU1-KO 0.55 >More info 0.41 >More info Leaf Col(0) rosette leaves Original data GEO bulk
57 csn4-1 mutant 0.61 >More info 0.35 >More info WT dark Original data GEO bulk
58 apum23 0.54 >More info 0.42 >More info WT (Col-3) aerial parts Original data GEO bulk
59 msh1 recA3 heat shock 0.38 >More info 0.58 >More info WT heat shock above-ground parts Original data GEO bulk
60 Cs root -0.38 >More info -0.58 >More info control root Original data GEO bulk
61 SCR 24hr-S 0.43 >More info 0.53 >More info SCR 0hr endodermis Original data
62 Triazolopyrimidine EC50 0.55 >More info 0.40 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
63 seed germinating in countinuous light 24h SL 0.28 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
64 hira-root -0.40 >More info -0.55 >More info WT-root root Original data
65 nia1nia2noa1-2 0.59 >More info 0.36 >More info Col-0 whole seedlings Original data GEO bulk
66 csn3-1 dark 0.57 >More info 0.38 >More info WT dark Original data GEO bulk
67 root cells stele 140mM NaCl 48 hours 0.57 >More info 0.37 >More info root cells stele standard 1 hour root cells stele Original data
68 Col leaves 48h LT 0.52 >More info 0.42 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
69 root cells stele 140mM NaCl 20 hours 0.58 >More info 0.35 >More info root cells stele standard 1 hour root cells stele Original data
70 root cells endodermis 140mM NaCl 32 hours 0.57 >More info 0.36 >More info root cells endodermis standard 1 hour root cells endodermis Original data
71 root cells stele 140mM NaCl 8 hours 0.55 >More info 0.37 >More info root cells stele standard 1 hour root cells stele Original data
72 dicamba 0.50 >More info 0.40 >More info WT mock whole seedling Original data GEO bulk
73 Heat shock optimum 0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 Shoot -Cs 0.38 >More info 0.52 >More info Control-shoot Original data GEO bulk
75 root - 01% oxygen - 48h 0.52 >More info 0.37 >More info root - 21% oxygen - 48h Original data GEO bulk
76 21h-DC3000 avrRpm1 0.39 >More info 0.50 >More info 21h-DC3000 leaves Original data GEO bulk
77 root cells endodermis 140mM NaCl 20 hours 0.51 >More info 0.37 >More info root cells endodermis standard 1 hour root cells endodermis Original data
78 SCR-GR Time 6H Dex -0.58 >More info -0.30 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
79 csn3-1 light 0.54 >More info 0.33 >More info WT light Original data GEO bulk
80 GA4 3 h (ga1 seed) 0.53 >More info 0.34 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
81 Chemically 0.34 >More info 0.53 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
82 oligomycin 1 h 0.28 >More info 0.59 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
83 intact root auxin 0.53 >More info 0.33 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
84 csn5 (csn5a-2 csn5b) light 0.53 >More info 0.33 >More info WT light Original data GEO bulk
85 Col-0 norflurazon 0.50 >More info 0.36 >More info Col-0 control Original data GEO bulk
86 PNO8 12 h -0.26 >More info -0.60 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
87 gun1-1 -lincomycin -0.35 >More info -0.51 >More info Col-0 -lincomycin Original data GEO bulk
88 phr1 phl1 Shoot-Pi 0.52 >More info 0.33 >More info WT Shoot-Pi shoots Original data GEO bulk
89 35SpBVR3 -0.54 >More info -0.31 >More info WT Original data GEO bulk
90 aox1a(line) MLD stressed 0.50 >More info 0.35 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
91 Whole root - low pH 6H 0.21 >More info 0.64 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
92 Col BTH 0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
93 Shoot apex inflorescence (after bolting) 0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 NAA 6h 0.53 >More info 0.27 >More info before treatment NAA root Original data GEO bulk
95 Full C2 T3 -0.23 >More info -0.57 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
96 Col-0 6h NAA 0.53 >More info 0.26 >More info Col-0 6h MOCK Original data GEO bulk
97 Blue Light 4 h 0.29 >More info 0.50 >More info White Light 4 h Original data Light treatments
98 Col-O low light -0.51 >More info -0.27 >More info Col-O bule light Original data GEO bulk
99 phr1 Shoot-Pi 0.50 >More info 0.27 >More info WT Root-Pi shoots Original data GEO bulk
100 CabpBVR2 -0.54 >More info -0.23 >More info WT Original data GEO bulk
101 abi4-102 -lincomycin -0.51 >More info -0.24 >More info Col-0 -lincomycin Original data GEO bulk
102 hni9 high nitrogen 0.50 >More info 0.25 >More info WT high nitrogen roots Original data GEO bulk
103 Wounding Stress3 h (root) -0.50 >More info -0.24 >More info Stress mock 3 h (root) Original data Stress treatments
104 E2Fa-Dpa 0.50 >More info 0.21 >More info WT Original data GEO bulk
105 Whole root - low pH 3H 0.13 >More info 0.58 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
106 4C 24h(SOIL) 0.50 >More info 0.20 >More info 4C 0h(SOIL) Original data GEO bulk
107 etiolated cop1 0.65 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
108 Leafminer damaged seedlings 0.13 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
109 control leaf (cmt 5d) -0.12 >More info -0.56 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
110 Whole root - low pH 1H 0.04 >More info 0.63 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
111 WT 24H Cold 0.51 >More info 0.15 >More info WT control Original data GEO bulk
112 root cap pGL2 3h BL -0.51 >More info -0.15 >More info root cap pGL2 0h BL brassinosteroid root Original data
113 WT cold 24h 0.51 >More info 0.13 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
114 ARR21C-ox 0.50 >More info 0.13 >More info Col-0 Original data ARR21C overexpression
115 phosphate-starved -0.13 >More info -0.50 >More info control shoot tissue Original data GEO bulk
116 Laer pretreat GA Flg22 1h -0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
117 Light 3day hml 0.05 >More info 0.55 >More info 0h hml Original data
118 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
119 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
120 Col0-PsmES4326-24hpi -0.09 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
121 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
122 8hr-pH4.5 0.00 >More info 0.50 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk