4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on atmyc2 Seedling BL
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List of experiments correlated with "atmyc2 Seedling BL"  Help Download transcriptome of top 30
Score Experiment Correlation from
atmyc2 Seedling BL		 Correlation to
atmyc2 Seedling BL		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 atmyc2 Seedling BL 1.00 >More info 1.00 >More info WT Seedling BL Original data GEO bulk
2 bHLH122 ox 0.74 >More info 0.63 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
3 hrpA fliC 7h -0.75 >More info -0.60 >More info Mock 7h hrpA fliC Original data GEO bulk
4 SAM SE agl15 agl18 double mutant -0.71 >More info -0.63 >More info SAM SE Col Original data GEO bulk
5 atmyc2 cop1 Seedling BL 0.74 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
6 cop1 Seedling BL 0.74 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
7 Shoot -K -0.77 >More info -0.51 >More info Control-shoot Original data GEO bulk
8 K starvation (shoot) -0.77 >More info -0.51 >More info Ws (shoot) Original data GEO bulk
9 cca1-lhy 60m light 0.77 >More info 0.47 >More info 60m light whole seedlings Original data GEO bulk
10 arp6-10 12 ºC 0.50 >More info 0.72 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
11 dark +H2O2 0.47 >More info 0.74 >More info dark 5 mM H2O2 seedling Original data GEO bulk
12 roottip control pWOL 0.75 >More info 0.45 >More info roottip control total control roottip Original data GEO bulk
13 roottip control pSCR 0.67 >More info 0.51 >More info roottip control total control roottip Original data GEO bulk
14 gpa1 -ABA LF -0.55 >More info -0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
15 Seedling-control POLYSOMESmRNA -0.63 >More info -0.54 >More info Seedling-control TOTALmRNA seedling Original data
16 short 17-degree- -0.47 >More info -0.69 >More info control short Original data GEO bulk
17 rrd2 IBA -0.45 >More info -0.71 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
18 afb3-1 2h KCl 0.67 >More info 0.47 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
19 Wounding Stress3 h (shoot) -0.73 >More info -0.39 >More info Stress mock 3 h (shoot) Original data Stress treatments
20 tbf1-SA -0.50 >More info -0.61 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
21 express RfBP 0.71 >More info 0.39 >More info WT green part of the whole plant Original data GEO bulk
22 dark +lincomycin -0.53 >More info -0.57 >More info dark -lincomycin Original data GEO bulk
23 tunicamycin 0.57 >More info 0.53 >More info DMF Original data GEO bulk
24 cca1-lhy before light 0.53 >More info 0.57 >More info before light whole seedlings Original data GEO bulk
25 4h decapitation -0.66 >More info -0.44 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
26 agb1 gpa1 -ABA LF -0.47 >More info -0.63 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
27 tbf1-mock spray -0.56 >More info -0.51 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
28 35S::HRE2 Aerobic 0.69 >More info 0.38 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
29 Van SA -0.70 >More info -0.37 >More info Col-0 SA Original data GEO bulk
30 dsr1 0.69 >More info 0.38 >More info WT mock Whole seedling Original data GEO bulk
31 root hypoxia pSCR 0.70 >More info 0.34 >More info root hypoxia total hypoxia root Original data GEO bulk
32 mARF10 -0.73 >More info -0.30 >More info Col-0 Original data GEO bulk
33 oas-a1.1 shoot 0.67 >More info 0.36 >More info WT-Untreated Shoot Original data GEO bulk
34 46T-CK 0.66 >More info 0.37 >More info WT-CK none Original data
35 agb1 -ABA LF -0.45 >More info -0.58 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
36 Col-0 9 hpi A. brassicicola -0.66 >More info -0.36 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
37 root hypoxia pCO2 0.63 >More info 0.39 >More info root hypoxia total hypoxia root Original data GEO bulk
38 Col-0 +ABA LF -0.48 >More info -0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
39 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.40 >More info -0.62 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
40 Ler KAR1 24h seed -0.60 >More info -0.41 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
41 prors1-2 leaves 0.73 >More info 0.28 >More info Col-0 leaves leaves Original data
42 Col-7 Sucrose -0.72 >More info -0.29 >More info col-7 Original data GEO bulk
43 root - 04% oxygen - 48h -0.54 >More info -0.47 >More info root - 21% oxygen - 48h Original data GEO bulk
44 atsf1-2 mutant seedling -0.71 >More info -0.29 >More info Col-0 seedling seedlings Original data
45 elf3-7-16ºC -0.73 >More info -0.27 >More info WT-16ºC Original data GEO bulk
46 short 14-degree- -0.45 >More info -0.55 >More info control short Original data GEO bulk
47 roottip hypoxia pWOL 0.50 >More info 0.49 >More info roottip hypoxia total Original data GEO bulk
48 root control pCO2 0.61 >More info 0.38 >More info root control total control root Original data GEO bulk
49 xyl-grown cell culture- 1h 1mM Glc -0.34 >More info -0.65 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
50 35:SUB1C -0.51 >More info -0.47 >More info WT whole seedling Original data GEO bulk
51 nNOS-control -0.46 >More info -0.52 >More info WT-control leaf Original data
52 P. infestans 6 h (leaf) -0.82 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
53 root hypoxia pSUC2 0.66 >More info 0.31 >More info root hypoxia total hypoxia root Original data GEO bulk
54 iron minus 24h 0.78 >More info 0.19 >More info iron +24h root Original data GEO bulk
55 atmyc2 Seedling BL+ABA 0.47 >More info 0.50 >More info WT Seedling BL+ABA Original data GEO bulk
56 DC3000 7h -0.65 >More info -0.31 >More info Mock 7h DC3000 Original data GEO bulk
57 tmm1-inflorescence-tips -0.43 >More info -0.53 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
58 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
59 ein2-1 9 hpi A. brassicicola -0.65 >More info -0.29 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
60 IAA 0h -0.60 >More info -0.34 >More info control 0h root Original data GEO bulk
61 Full AC2 T2 -0.57 >More info -0.37 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
62 toc1-1-73hr 0.25 >More info 0.68 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
63 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
64 max3GR24 (1 uM) -0.64 >More info -0.29 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
65 Pst-DC3000(avrRpm1)-4hpi -0.63 >More info -0.30 >More info Pst-DC3000-4hpi Original data GEO bulk
66 Van -0.64 >More info -0.29 >More info Col-0 Original data GEO bulk
67 short 8-degree- -0.54 >More info -0.38 >More info control short Original data GEO bulk
68 spch 0.64 >More info 0.28 >More info Col-0 WT whole seedling Original data GEO bulk
69 Cor 10h -0.68 >More info -0.24 >More info Mock 10h Cor Original data GEO bulk
70 Light 3day hml 0.61 >More info 0.31 >More info 0h hml Original data
71 cat2-short-day 2d 0.58 >More info 0.34 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
72 Root dark control 24h 0.55 >More info 0.36 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
73 leaf13 -0.65 >More info -0.26 >More info unwounded leaves none Original data GEO bulk
74 OH1 0.66 >More info 0.25 >More info Col-0 leaves Original data GEO bulk
75 P35S:rGRF3 -0.64 >More info -0.27 >More info WS Original data GEO bulk
76 toc1-1-53hr 0.32 >More info 0.59 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
77 nNOS-drought -0.34 >More info -0.57 >More info WT-drought leaf Original data
78 HARAP hypoxic -0.80 >More info -0.10 >More info hypoxic hypoxia Original data GEO bulk
79 root control pSUC2 0.62 >More info 0.28 >More info root control total control root Original data GEO bulk
80 cngc1 0.56 >More info 0.33 >More info Ws-2 Seedlings Original data GEO bulk
81 anac017-1 H2O2 3h 0.63 >More info 0.26 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
82 aerial organ callus inducing medium 24h -0.71 >More info -0.18 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
83 opr3 JA 0.5 h -0.53 >More info -0.35 >More info opr3 0 h Original data GEO bulk
84 pnp1-1 1wk +P -0.66 >More info -0.22 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
85 root control pSultr2:2 0.57 >More info 0.31 >More info root control total control root Original data GEO bulk
86 treated group -0.68 >More info -0.19 >More info Control group Original data
87 Mh0 UV 0.60 >More info 0.27 >More info Mh0 mock UV seedling Original data
88 abi4-102 (II) -0.61 >More info -0.26 >More info Col (II) rosette Original data GEO bulk
89 SAM SE 35S:AGL15 -0.66 >More info -0.21 >More info SAM SE Col Original data GEO bulk
90 col-5 DC3000-avrRpm 4h -0.62 >More info -0.25 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
91 gun1gun5 far-red pretreated 0.50 >More info 0.37 >More info WT far-red pretreated Original data GEO bulk
92 rosette Dark Wounded -0.68 >More info -0.18 >More info rosette Dark Control Original data GEO bulk
93 HopZ1a treated -0.67 >More info -0.19 >More info col Original data GEO bulk
94 aerial organ callus inducing medium 96 h -0.66 >More info -0.20 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
95 gpa1-4/agb1-2 ozone 2d 0.77 >More info 0.09 >More info Col ozone 2d ozone Original data GEO bulk
96 rosette Light Wounded -0.73 >More info -0.13 >More info rosette Light Control Original data GEO bulk
97 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.28 >More info -0.58 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
98 short 10-degree- -0.52 >More info -0.33 >More info control short Original data GEO bulk
99 mutant acs1A (single mutant) 0.53 >More info 0.32 >More info col control (single mutant) Original data GEO bulk
100 Cor hrpS 10h -0.68 >More info -0.17 >More info Mock 10h Cor hrpS Original data GEO bulk
101 vtc2 zygotic embryo 0.52 >More info 0.32 >More info WT zygotic embryo zygotic embryo Original data GEO bulk
102 roottip hypoxia pSCR 0.29 >More info 0.55 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
103 WT-elf18 -0.32 >More info -0.52 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
104 seedlings protease IV -0.72 >More info -0.12 >More info seedlings nontreated control whole seedling Original data
105 Whole root - low pH 24H 0.55 >More info 0.28 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
106 Fenclorim 24hr -0.54 >More info -0.29 >More info Acetone 24hr root Original data GEO bulk
107 sdg8-2 mutant -0.51 >More info -0.32 >More info wild type leaf Original data GEO bulk
108 piffq FR 1h -0.72 >More info -0.11 >More info WT FR 1h whole seedling Original data GEO bulk
109 Pto inoculated -0.58 >More info -0.25 >More info col Original data GEO bulk
110 gh3.5D uninoculated 0.57 >More info 0.26 >More info Col-0 48 hpi Original data GEO bulk
111 ataf1-1 mutant Col-0 Bgh inoculated -0.71 >More info -0.12 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
112 35S-MIF1 dark grown -0.55 >More info -0.27 >More info Dark-grown WT control Original data GEO bulk
113 CHLD reduction -0.55 >More info -0.27 >More info Col-0 dex green tissue Original data GEO bulk
114 Drought Stress 24 h (shoot) -0.60 >More info -0.22 >More info Stress mock 24 h (shoot) Original data Stress treatments
115 mbd11 mutant thaliana 10-day-old seedling -0.50 >More info -0.31 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
116 gun1gun5 Norflurazon 0.54 >More info 0.27 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
117 gun4-1 0.54 >More info 0.27 >More info WT Col-0 seedling Original data GEO bulk
118 WT zebularine -0.53 >More info -0.28 >More info WT mock shoot apical meristem Original data
119 dsr1 SA Treated 0.60 >More info 0.21 >More info SA Whole seedling Original data GEO bulk
120 Leafminer locally damaged thaliana seedlings -0.69 >More info -0.12 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
121 anac017-1 AntimycinA 3h 0.58 >More info 0.23 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
122 sid2-2 9 hpi A. brassicicola -0.60 >More info -0.21 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
123 Col-0-avrB-6h -0.66 >More info -0.14 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
124 shoots bhlh100/101 100uM Fe -0.51 >More info -0.29 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
125 WT Col-0 Bgh inoculated -0.63 >More info -0.16 >More info WT Col-0 Un-inoculated Original data GEO bulk
126 root - 08% oxygen - 2h -0.12 >More info -0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
127 toc1-1-85hr 0.13 >More info 0.66 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
128 coi1-16 ein2 sid2 ctrl 0.71 >More info 0.08 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
129 ice1 control -0.67 >More info -0.11 >More info WT control Original data GEO bulk
130 mtf1-1 -0.64 >More info -0.14 >More info Col0 root Original data
131 Rsch 1d -0.62 >More info -0.16 >More info Rsch CA Leaves Original data
132 Mutant iaa17-6 -0.62 >More info -0.15 >More info Col Original data GEO bulk
133 Root P recovery 0.66 >More info 0.11 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
134 Col-0 ozone -0.74 >More info -0.03 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
135 AtGATA2ox -0.53 >More info -0.24 >More info Col seedling Original data GEO bulk
136 roots bhlh100/101 0uM Fe 0.56 >More info 0.20 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
137 Botrytis cinerea 48h -0.77 >More info 0.01 >More info control 48h Original data GEO bulk
138 rao2 H2O2 3h 0.50 >More info 0.26 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
139 35:SUB1A -0.64 >More info -0.12 >More info WT whole seedling Original data GEO bulk
140 Ws 2h KNO3 0.70 >More info 0.06 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
141 elf3-7-23ºC -0.67 >More info -0.09 >More info WT-23ºC Original data GEO bulk
142 vte2 leaves 48h LT -0.65 >More info -0.11 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
143 wt systemic wounding -0.50 >More info -0.26 >More info wt control leaves Original data GEO bulk
144 gpa1 +ABA LF 0.13 >More info 0.63 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
145 VND6 0h -0.54 >More info -0.21 >More info wt 0h Original data GEO bulk
146 lec1-1 8 DAF Seed -0.64 >More info -0.11 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
147 shoot hypoxia p35S -0.52 >More info -0.23 >More info shoot hypoxia total Original data GEO bulk
148 Selenate (root) -0.73 >More info -0.02 >More info Ws (root) Original data GEO bulk
149 Root Selenate -0.73 >More info -0.02 >More info Root control 40 micromolar selenate Root Original data GEO bulk
150 ein2-1 +elf18 10h -0.70 >More info -0.05 >More info WT +elf18 10h elf18 Original data GEO bulk
151 myb50 xylem -0.57 >More info -0.18 >More info wt xylem xylem Original data GEO bulk
152 Lip0 UV -0.56 >More info -0.19 >More info Lip0 mock UV seedling Original data
153 AmGSTF1 expressor 0.51 >More info 0.24 >More info WT leaf tissue Original data GEO bulk
154 wrky33 mock -0.65 >More info -0.10 >More info WT mock 14 hour mock control leaves Original data
155 B.cinerea 18 h infection -0.83 >More info 0.08 >More info Mock 18 h Original data Botrytis cinerea infection
156 Botrytis cinerea 18h -0.83 >More info 0.08 >More info control 18h Original data GEO bulk
157 irradiated leaf (cmt 5d) -0.79 >More info 0.05 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
158 sta1 -0.50 >More info -0.24 >More info WT Original data GEO bulk
159 over-tAPX 0.50 >More info 0.24 >More info WT Col Original data GEO bulk
160 cdkf:1-2 -0.56 >More info -0.18 >More info wt seedling young seedlings Original data GEO bulk
161 ein3 eil1 JA -0.64 >More info -0.10 >More info JA Whole seedling Original data GEO bulk
162 toc1-1-77hr 0.12 >More info 0.62 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
163 WT polysome -0.68 >More info -0.05 >More info WT non-polysome Original data GEO bulk
164 ref6-1 -0.56 >More info -0.17 >More info Col whole seedling Original data GEO bulk
165 Chitin -0.54 >More info -0.19 >More info Col C Original data GEO bulk
166 Salt Stress 24 h (shoot) -0.69 >More info -0.04 >More info Stress mock 24 h (shoot) Original data Stress treatments
167 AvrRpt2 Col-0 6hpi -0.66 >More info -0.07 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
168 Col whole leaf 6hpi -0.61 >More info -0.12 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
169 OsSAP11 expressing 0.75 >More info -0.02 >More info WT seedlings Original data GEO bulk
170 agb1 gpa1 +ABA LF 0.23 >More info 0.50 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
171 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.18 >More info -0.55 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
172 msh1 albino -0.55 >More info -0.17 >More info WT aerial part Original data GEO bulk
173 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.74 >More info 0.02 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
174 hira-root -0.51 >More info -0.21 >More info WT-root root Original data
175 Whole root - S 48H 0.61 >More info 0.11 >More info Whole root - S 0H Original data GEO bulk
176 Te ozone -0.73 >More info 0.01 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
177 Brassinolide 1 h (det2) -0.54 >More info -0.18 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
178 wrky72-1-NOCO2 INFECTED 0.18 >More info 0.54 >More info WT-NOCO2 INFECTED Original data GEO bulk
179 mkk1 24h BTH rep -0.15 >More info -0.56 >More info Col-0 24h BTH rep Original data GEO bulk
180 Bay-0-3h IAA 0.60 >More info 0.11 >More info Bay-0-0h IAA whole plant Original data GEO bulk
181 DMTU -0.59 >More info -0.12 >More info control Original data GEO bulk
182 miR393 flg22 1h -0.57 >More info -0.14 >More info WT 0h Leaf tissue Original data GEO bulk
183 WT NAA/flg 1h -0.51 >More info -0.20 >More info WT 0h Leaf tissue Original data GEO bulk
184 naxillin 3h -0.56 >More info -0.14 >More info before treatment naxillin root Original data GEO bulk
185 GST-overexpression seedlings control -0.55 >More info -0.15 >More info WT seedlings control Seedlings Original data
186 root protoplasts 40 mM NaCl -0.61 >More info -0.09 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
187 WT Bc inoculation 14h -0.70 >More info 0.00 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
188 shoot hypoxia pGL2 -0.60 >More info -0.10 >More info shoot hypoxia total Original data GEO bulk
189 lec2-1 8 DAF Seed -0.58 >More info -0.12 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
190 coi1-16 ein2 sid2 ozone -0.71 >More info 0.01 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
191 Col-Luc WT 3h antimycin A -0.56 >More info -0.13 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
192 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
193 WT Uniconazole 0.63 >More info 0.06 >More info WT mock Original data GEO bulk
194 Sha-3h IAA 0.57 >More info 0.12 >More info Sha-0h IAA whole plant Original data GEO bulk
195 Col whole leaf 7dpi -0.51 >More info -0.17 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
196 root hypoxia pWOL 0.50 >More info 0.18 >More info root hypoxia total hypoxia root Original data GEO bulk
197 miR393 flg22 2h -0.50 >More info -0.18 >More info WT 0h Leaf tissue Original data GEO bulk
198 Whole root - S 24H 0.61 >More info 0.07 >More info Whole root - S 0H Original data GEO bulk
199 HopZ1a treated ulp1c ulp1d -0.55 >More info -0.12 >More info col Original data GEO bulk
200 WT flg22 1h -0.56 >More info -0.11 >More info WT 0h Leaf tissue Original data GEO bulk
201 whole roots -Fe 48 hour 0.54 >More info 0.13 >More info whole roots standard Original data GEO bulk
202 HRE1-RNAi20 hypoxia 6 hrs -0.62 >More info -0.05 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
203 IMI 4mM -0.63 >More info -0.04 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
204 A. halleri highZn-root 0.69 >More info -0.02 >More info A. petraea highZn-root Original data GEO bulk
205 whole roots -Fe 72 hour 0.51 >More info 0.15 >More info whole roots standard Original data GEO bulk
206 hypoxic 0.68 >More info -0.02 >More info WT aerobic hypoxia Original data GEO bulk
207 Fe starvation 72 h 0.51 >More info 0.15 >More info Control Original data GEO bulk
208 toc1-1-81hr 0.14 >More info 0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
209 ARF10 -0.69 >More info 0.03 >More info Col-0 Original data GEO bulk
210 WT+chitooctaose -0.51 >More info -0.14 >More info WT+water chitooctaose seedlings Original data GEO bulk
211 atr mock -0.61 >More info -0.04 >More info WT mock shoot apical meristem Original data
212 arr-dmso-sample -0.58 >More info -0.07 >More info Wt-dmso-sample seedling Original data
213 AFB1 0h 0.08 >More info 0.57 >More info Col 0h Leaf Original data GEO bulk
214 chito-octamer -0.65 >More info 0.01 >More info Col Mock Original data GEO bulk
215 pollinated pop2-1 flowers 0.53 >More info 0.11 >More info pollinated WT flowers flowers Original data GEO bulk
216 Laer Flg22(Agrobacterium) 2h 0.55 >More info 0.09 >More info Laer Control leaf discs Original data GEO bulk
217 C24 UV1 0.53 >More info 0.11 >More info C24 mock UV seedling Original data
218 Got7 UV -0.53 >More info -0.10 >More info Got7 mock UV seedling Original data
219 cs26 short-day 0.50 >More info 0.13 >More info Leaves-WT-SD leaf Original data GEO bulk
220 rcf1-1 cold 0h -0.59 >More info -0.04 >More info WT cold 0h Control seedlings Original data GEO bulk
221 Laer pretreat GA Flg22 1h -0.08 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
222 Rsch 8h -0.70 >More info 0.07 >More info Rsch CA Leaves Original data
223 whole roots 140 mM NaCl 30 minutes -0.54 >More info -0.08 >More info whole roots standard Original data GEO bulk
224 R. amphibia submerged 0.51 >More info 0.11 >More info R. amphibia air Original data GEO bulk
225 agb1 +ABA LF 0.09 >More info 0.53 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
226 GR-REV 120min -0.56 >More info -0.05 >More info Col 120min Original data GEO bulk
227 CLO 4mM -0.58 >More info -0.03 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
228 opr3 OPDA 22 h -0.51 >More info -0.10 >More info opr3 0 h Original data GEO bulk
229 ice1 3H Cold -0.50 >More info -0.11 >More info WT 3H Cold Original data GEO bulk
230 Mutant iaa5_6_19(IAA) 0.60 >More info 0.01 >More info Col (IAA) Original data GEO bulk
231 Col-0 37C -0.71 >More info 0.10 >More info Col-0 22C Original data GEO bulk
232 CMV-A2b mutant -0.62 >More info 0.01 >More info Mock-At Aerial tissues Original data GEO bulk
233 JMJ24 knockout -0.61 >More info 0.00 >More info WT Original data GEO bulk
234 shoot control pGL2 -0.52 >More info -0.09 >More info shoot control total Original data GEO bulk
235 prt6-1 0.57 >More info 0.03 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
236 scrm-D -0.52 >More info -0.08 >More info Col-0 WT whole seedling Original data GEO bulk
237 tor mutant -0.63 >More info 0.03 >More info WT (Col) none seedlings Original data GEO bulk
238 F1 whole seedlings root -0.50 >More info -0.10 >More info Col whole seedlings root Seedlings Original data GEO bulk
239 Time-0 chr11-1chr17-1 0.56 >More info 0.03 >More info Time-0 Col-0 leaf explants Original data
240 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
241 mbd4 mutant thaliana 10-day-old seedling 0.51 >More info 0.08 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
242 irradiated leaf (WT 5d) -0.62 >More info 0.03 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
243 aerial organ callus inducing medium 48 h -0.50 >More info -0.09 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
244 Stem wox4 0.63 >More info -0.04 >More info Stem Col first internode of stem Original data GEO bulk
245 ASL9-ox 0.62 >More info -0.03 >More info WT aerial parts of seedlings Original data GEO bulk
246 Elevated CO2 AMPLE N DAY -0.64 >More info 0.06 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
247 ein2-1 +elf18 2h -0.68 >More info 0.10 >More info WT +elf18 2h elf18 Original data GEO bulk
248 SAB -0.68 >More info 0.10 >More info COL seedling Original data
249 wrky33 Bc inoculation 14h -0.62 >More info 0.04 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
250 gun5 norflurazon 0.50 >More info 0.08 >More info gun5 control Original data GEO bulk
251 ga1-3/brm-1 -0.50 >More info -0.07 >More info wt shoots Original data GEO bulk
252 Red Light 45min 0.52 >More info 0.05 >More info White Light 45min Original data Light treatments
253 spx1 spx2 complete -0.60 >More info 0.03 >More info WT complete seedlings Original data
254 HSP90 Reduced RNAi-A3 -0.53 >More info -0.03 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
255 pmr5 -0.64 >More info 0.08 >More info Col-0 Original data GEO bulk
256 Cycloheximide 3 h -0.58 >More info 0.02 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
257 Bay-0-1h IAA 0.52 >More info 0.03 >More info Bay-0-0h IAA whole plant Original data GEO bulk
258 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.56 >More info 0.01 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
259 Fenclorim 4hr -0.51 >More info -0.04 >More info Acetone 4hr root Original data GEO bulk
260 arf2 brz 0.51 >More info 0.04 >More info arf2 mock Original data GEO bulk
261 Atss3 Light4 0.59 >More info -0.04 >More info Atss3 Dark0.5 Original data GEO bulk
262 35S:RPS4 rrs1-11 2h -0.60 >More info 0.05 >More info 35S:RPS4 2h leaves Original data
263 Ws 100mM NaCl -0.63 >More info 0.09 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
264 Ws leaf 100mM NaCl -0.63 >More info 0.09 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
265 elevated CO2 high Mg shoot 0.52 >More info 0.02 >More info atmospheric CO2 high Mg shoot Shoot Original data
266 ein2 mutant roots mock -0.62 >More info 0.08 >More info roots mock Original data GEO bulk
267 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
268 WT seedlings MV -0.65 >More info 0.12 >More info WT seedlings control Seedlings Original data GEO bulk
269 SOS1 0mM NaCl -0.71 >More info 0.18 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
270 SND1 12h -0.53 >More info 0.00 >More info wt 12h Original data GEO bulk
271 whole roots -Fe 0.51 >More info 0.02 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
272 4C 1h -0.55 >More info 0.02 >More info 4C 0h Original data GEO bulk
273 SLWF infested -0.53 >More info -0.00 >More info SLWF uninfested rosette tissue Original data GEO bulk
274 pip3 At2g19270 TDNA 9 -0.04 >More info 0.56 >More info Col-0 whole plant Original data GEO bulk
275 elevated CO2 high Mg root 0.57 >More info -0.05 >More info atmospheric CO2 high Mg root Root Original data
276 seedlings +5AC -0.57 >More info 0.06 >More info control seedlings 10-day old whole seedling Original data GEO bulk
277 SA 3h 0.57 >More info -0.07 >More info EtOH 3h 3hr Original data GEO bulk
278 pmr5 pmr6 -0.55 >More info 0.06 >More info Col-0 Original data GEO bulk
279 ein2 mutant roots IAA -0.55 >More info 0.06 >More info roots ethylene Original data GEO bulk
280 amiRAP hypoxic -0.68 >More info 0.19 >More info hypoxic hypoxia Original data GEO bulk
281 M6PR transgenic 0mM NaCl -0.66 >More info 0.17 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
282 toc1-1-89hr 0.51 >More info -0.02 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
283 Heat shock optimum -0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
284 CT101 ozone -0.55 >More info 0.07 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
285 SIZ -0.56 >More info 0.08 >More info COL seedling Original data
286 Col BRZ 0.55 >More info -0.10 >More info Col mock Original data GEO bulk
287 hst5 -0.53 >More info 0.08 >More info Col-0 Original data GEO bulk
288 abh1 -ABA -0.50 >More info 0.05 >More info Col-0 -ABA Original data GEO bulk
289 wavy -0.56 >More info 0.13 >More info WT Original data GEO bulk
290 M6PR transgenic 100mM NaCl -0.56 >More info 0.13 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
291 pepr1-1 Pepr2-3 +Pep2 2h 0.53 >More info -0.10 >More info WT +Pep2 2h Pep2 Original data GEO bulk
292 siliques AtHb1 control -0.09 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
293 ptpks2 0.18 >More info -0.61 >More info Col-WT leaves Original data GEO bulk
294 root cells cortex -Fe -0.68 >More info 0.26 >More info whole roots standard Original data GEO bulk
295 wrky72-1-MOCK -0.51 >More info 0.09 >More info WT-MOCK Original data GEO bulk
296 Mutant axr3-1 (IAA) -0.09 >More info 0.51 >More info Col (IAA) Original data GEO bulk
297 4d red light grown hmr-22 seedlings 0.62 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
298 Whole root - low pH 30min -0.54 >More info 0.15 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
299 atmyc2 Seedling Dark 0.25 >More info -0.64 >More info WT Seedling Dark Original data GEO bulk
300 Chitosan 3h Treatment -0.60 >More info 0.22 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
301 penta MeJA 1h -0.56 >More info 0.19 >More info Laer MeJA 1h leaf discs Original data GEO bulk
302 1 h Light Total RNA 0.52 >More info -0.15 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
303 sid2-PsmES4326-24hpi -0.53 >More info 0.16 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
304 myb3 myb3r4d -0.66 >More info 0.30 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
305 ANOXIA 0.66 >More info -0.30 >More info ANOXIA+SUCROSE Original data GEO bulk
306 IAA7mII over-expressor IAA Treated -0.35 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
307 Whole root - S 12H 0.51 >More info -0.18 >More info Whole root - S 0H Original data GEO bulk
308 Col0-PsmES4326-24hpi -0.35 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
309 R. solani AG8 -0.57 >More info 0.32 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
310 miR 0h -0.32 >More info 0.55 >More info Col 0h Leaf Original data GEO bulk
311 WT +Pep2 2h -0.55 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
312 3x(m) -0.34 >More info 0.53 >More info 2x two week old seedlings Original data
313 roottip hypoxia p35S -0.51 >More info 0.38 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
314 Leafminer damaged seedlings -0.69 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
315 35S::PI ap3-3 35S::AP-GR +DEX 0.39 >More info -0.51 >More info 0hr DEX Original data GEO bulk