4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on GO5; 0h switch to ambient CO2 concentrations;
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List of experiments correlated with "GO5; 0h switch to ambient CO2 concentrations;"  Help Download transcriptome of top 30
Score Experiment Correlation from
GO5; 0h switch to ambient CO2 concentrations;		 Correlation to
GO5; 0h switch to ambient CO2 concentrations;		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 GO5; 0h switch to ambient CO2 concentrations; 1.00 >More info 1.00 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
2 cat2-2; 0h switch to ambient CO2 concentrations; 0.80 >More info 0.77 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
3 SA 4mM -0.59 >More info -0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
4 WT 2-4h Xanthomonas -0.56 >More info -0.76 >More info WT T0 Original data GEO bulk
5 stn7-1 0.60 >More info 0.70 >More info Col-0 rosette leaves Original data GEO bulk
6 myb3 myb3r4d -0.59 >More info -0.68 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
7 ceh1 mutant -0.45 >More info -0.82 >More info Parent line Original data
8 cpr5 -0.56 >More info -0.70 >More info WT(COL) Original data GEO bulk
9 SLWF infested -0.67 >More info -0.59 >More info SLWF uninfested rosette tissue Original data GEO bulk
10 ice1 6H Cold -0.51 >More info -0.74 >More info WT 6H Cold Original data GEO bulk
11 ice1 control -0.54 >More info -0.68 >More info WT control Original data GEO bulk
12 cat2-hCO2 0.64 >More info 0.58 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
13 Elevated CO2 AMPLE N DAY -0.41 >More info -0.81 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
14 SA 3h -0.56 >More info -0.65 >More info EtOH 3h 3hr Original data GEO bulk
15 Col whole leaf 3dpi -0.54 >More info -0.66 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
16 Shoot -K -0.56 >More info -0.63 >More info Control-shoot Original data GEO bulk
17 K starvation (shoot) -0.56 >More info -0.63 >More info Ws (shoot) Original data GEO bulk
18 pmr5 pmr6 -0.47 >More info -0.72 >More info Col-0 Original data GEO bulk
19 gh3.5D uninoculated 0.50 >More info 0.68 >More info Col-0 48 hpi Original data GEO bulk
20 B.cinerea 18 h infection -0.52 >More info -0.65 >More info Mock 18 h Original data Botrytis cinerea infection
21 Botrytis cinerea 18h -0.52 >More info -0.65 >More info control 18h Original data GEO bulk
22 edr1 0 h powdery mildew -0.47 >More info -0.69 >More info Col-0 0 h powdery mildew Original data GEO bulk
23 eds16 whole leaf 7d UI 0.61 >More info 0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
24 CMV-A2b mutant -0.38 >More info -0.77 >More info Mock-At Aerial tissues Original data GEO bulk
25 GO5; harvested 8h continiously maintained in high
CO2;		 0.52 >More info 0.62 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
26 hrpA fliC 7h -0.40 >More info -0.74 >More info Mock 7h hrpA fliC Original data GEO bulk
27 edr1 36 h powdery mildew -0.42 >More info -0.71 >More info Col-0 36 h powdery mildew Original data GEO bulk
28 cpr5scv1 -0.44 >More info -0.68 >More info WT(COL) Original data GEO bulk
29 Leafminer locally damaged thaliana seedlings -0.51 >More info -0.60 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
30 RGA-GR-DEX -0.47 >More info -0.64 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
31 low CO2 + light -0.39 >More info -0.72 >More info normal CO2 + light Original data GEO bulk
32 Col-0 INA 48h -0.30 >More info -0.80 >More info Col-0 MOCK 48h Original data GEO bulk
33 CMV-WT -0.36 >More info -0.74 >More info Mock-At Aerial tissues Original data GEO bulk
34 upf1 -0.46 >More info -0.63 >More info WT whole plant Original data GEO bulk
35 sni1 -0.33 >More info -0.76 >More info WT Original data GEO bulk
36 cpr5npr1svi1 -0.40 >More info -0.69 >More info WT(COL) Original data GEO bulk
37 Col-0-avrB-6h -0.50 >More info -0.58 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
38 flu over-tAPX -0.48 >More info -0.60 >More info WT Col Original data GEO bulk
39 flu -0.45 >More info -0.63 >More info WT Col Original data GEO bulk
40 wavy -0.38 >More info -0.70 >More info WT Original data GEO bulk
41 pmr5 -0.38 >More info -0.70 >More info Col-0 Original data GEO bulk
42 cpr5npr1 -0.52 >More info -0.55 >More info WT(COL) Original data GEO bulk
43 IMI 4mM -0.52 >More info -0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 smg5-2 -0.56 >More info -0.50 >More info WT whole plant Original data GEO bulk
45 edr1 18 h powdery mildew -0.29 >More info -0.77 >More info Col-0 18 h powdery mildew Original data GEO bulk
46 DFPM -0.47 >More info -0.59 >More info control Original data GEO bulk
47 Time-0 chr11-1chr17-1 0.45 >More info 0.61 >More info Time-0 Col-0 leaf explants Original data
48 CLO 4mM -0.50 >More info -0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
49 GST NPP1 4 h (leaf) -0.38 >More info -0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
50 RPL18 TuMV inoculated total RNA -0.46 >More info -0.59 >More info mock inoculated total RNA PO Original data GEO bulk
51 Col-0 48 hpi -0.40 >More info -0.65 >More info Col-0 uninoculated Original data GEO bulk
52 20d after anthesis -0.50 >More info -0.54 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
53 Lipopolysaccaride4 h (leaf) -0.39 >More info -0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
54 Col-0 DCA 48h -0.34 >More info -0.70 >More info Col-0 MOCK 48h Original data GEO bulk
55 HopZ1a treated -0.40 >More info -0.64 >More info col Original data GEO bulk
56 Elevated CO2 AMPLE N NIGHT -0.28 >More info -0.76 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
57 erf104-ko Flg22 4h -0.46 >More info -0.57 >More info erf104-ko H2O 4h Original data GEO bulk
58 aphid saliva treated -0.34 >More info -0.69 >More info control aphid saliva treated leaves Original data GEO bulk
59 Myzus persicae saliva -0.34 >More info -0.69 >More info Control Original data GEO bulk
60 des1.1 -0.41 >More info -0.62 >More info Leaves-WT leaf Original data GEO bulk
61 Pto inoculated -0.41 >More info -0.62 >More info col Original data GEO bulk
62 msh1 albino -0.44 >More info -0.59 >More info WT aerial part Original data GEO bulk
63 sid2-1 cold 0.25 >More info 0.78 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
64 CMP 24hr -0.50 >More info -0.52 >More info Acetone 24hr root Original data GEO bulk
65 Drought Stress 24 h (shoot) -0.45 >More info -0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
66 GST 4 h (leaf) -0.23 >More info -0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 pepr1-1 Pepr2-3 +Pep2 2h 0.33 >More info 0.69 >More info WT +Pep2 2h Pep2 Original data GEO bulk
68 Cor hrpS 10h -0.37 >More info -0.65 >More info Mock 10h Cor hrpS Original data GEO bulk
69 del1-1 mutant 5d uninfected -0.22 >More info -0.80 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
70 35S:RPS4 eds1-2 8h 0.43 >More info 0.59 >More info 35S:RPS4 8h leaves Original data
71 Mature callus -0.51 >More info -0.50 >More info Young callus hypocotyls Original data GEO bulk
72 upf3 -0.39 >More info -0.62 >More info WT whole plant Original data GEO bulk
73 Fenclorim 4hr -0.46 >More info -0.55 >More info Acetone 4hr root Original data GEO bulk
74 ice1 3H Cold -0.54 >More info -0.46 >More info WT 3H Cold Original data GEO bulk
75 UV Stress 24 h (shoot) -0.20 >More info -0.80 >More info Stress mock 24 h (shoot) Original data Stress treatments
76 DC3000 2 h (leaf) -0.45 >More info -0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
77 HopZ1a treated ulp1c ulp1d -0.37 >More info -0.63 >More info col Original data GEO bulk
78 INA -0.27 >More info -0.73 >More info CK INA seedling Original data
79 JA 3h -0.50 >More info -0.49 >More info EtOH 3h 3hr Original data GEO bulk
80 abi4 vtc2 (I) -0.38 >More info -0.61 >More info Col (I) rosette Original data GEO bulk
81 Shoot -Cs -0.31 >More info -0.68 >More info Control-shoot Original data GEO bulk
82 Leafminer systemically damaged thaliana seedlings -0.40 >More info -0.59 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
83 npr1-1 SA 0.41 >More info 0.58 >More info Col-0 SA complete seedling Original data
84 8h-DC3000 avrRpm1 -0.34 >More info -0.64 >More info 8h-DC3000 leaves Original data GEO bulk
85 RPL18 TuMV inoculated polysomal RNA -0.41 >More info -0.57 >More info mock inoculated polysomal RNA PO Original data GEO bulk
86 camta1/3 warm -0.26 >More info -0.72 >More info WT warm entire aerial part Original data GEO bulk
87 OE WRKY63.3 high light -0.39 >More info -0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
88 DC3000 24h -0.32 >More info -0.66 >More info Mock 24h DC3000 Original data GEO bulk
89 A. thaliana-A. lyrata hybrid 0.30 >More info 0.68 >More info A. thaliana mature leaves before flowering Original data GEO bulk
90 DC3000 7h -0.57 >More info -0.40 >More info Mock 7h DC3000 Original data GEO bulk
91 9 hr Hypoxia Total RNA -0.53 >More info -0.44 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
92 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.54 >More info -0.43 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
93 AvrRpm1 2 h (leaf) -0.34 >More info -0.63 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
94 cs26 short-day 0.31 >More info 0.66 >More info Leaves-WT-SD leaf Original data GEO bulk
95 smg7b-1 -0.22 >More info -0.75 >More info WT whole plant Original data GEO bulk
96 Col ozone 2d -0.24 >More info -0.73 >More info Col clean-air 2d ozone Original data GEO bulk
97 rpoTmp(line) MLD stressed -0.45 >More info -0.52 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
98 tunicamycin 0.31 >More info 0.65 >More info DMF Original data GEO bulk
99 Col whole leaf 5dpi -0.22 >More info -0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
100 Col whole leaf amplified 5 dpi -0.31 >More info -0.65 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
101 1 h Light Total RNA 0.38 >More info 0.58 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
102 WT +elf18 2h -0.32 >More info -0.64 >More info WT untreated elf18 Original data GEO bulk
103 Cor 10h -0.46 >More info -0.50 >More info Mock 10h Cor Original data GEO bulk
104 Sulfometuron EC50 -0.41 >More info -0.55 >More info Carrier Original data GEO bulk
105 IRP1-OE-Fe--shoot -0.45 >More info -0.51 >More info COL-0-Fe--shoot shoot Original data
106 cpr5 -0.28 >More info -0.67 >More info WT seedling Original data GEO bulk
107 dense canopy -0.21 >More info -0.74 >More info single (control) petiole Original data GEO bulk
108 Phaseolicola 2 h (leaf) -0.40 >More info -0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
109 Col-0 9 hpi A. brassicicola -0.28 >More info -0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
110 aerial organ callus inducing medium 24h -0.51 >More info -0.43 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
111 ARR22-ox (t-zeatin 3 h) -0.50 >More info -0.44 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
112 Osmotic Stress 24 h (shoot) -0.42 >More info -0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
113 npr1-3 DCA 48h -0.29 >More info -0.65 >More info npr1-3 MOCK 48h Original data GEO bulk
114 phyB mutant 22C 10hrs 0.29 >More info 0.65 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
115 P.p 10.5hai -0.42 >More info -0.52 >More info At-Control roots Original data GEO bulk
116 CMP 4hr -0.36 >More info -0.58 >More info Acetone 4hr root Original data GEO bulk
117 Aerobic e1 ate2 -0.44 >More info -0.50 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
118 col-5 hrpA 12h -0.37 >More info -0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
119 Constans-mutant -0.27 >More info -0.66 >More info Col control above-ground whole plant Original data GEO bulk
120 Indigo Carmine 0.5 uM -0.16 >More info -0.77 >More info Control MV and IC Indigo Carmine Original data
121 Elevated CO2 expanding leaf -0.39 >More info -0.54 >More info Ambient CO2 expanding leaf expanding leaf Original data
122 Mutant coi1(leaf) 0.41 >More info 0.52 >More info Col-0 (leaf) Original data GEO bulk
123 vte2-1 1d vernalization -0.36 >More info -0.57 >More info WT 1d vernalization Original data GEO bulk
124 AsAKiin11 T2 -0.56 >More info -0.36 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
125 S58-2 -0.15 >More info -0.77 >More info wt Original data GEO bulk
126 dark +H2O2 0.51 >More info 0.41 >More info dark 5 mM H2O2 seedling Original data GEO bulk
127 9 hr Hypoxia 1 hr recovery Total RNA -0.52 >More info -0.39 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
128 ein2-1 9 hpi A. brassicicola -0.36 >More info -0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
129 ABA JA 24h -0.18 >More info -0.73 >More info EtOH 24h 24hr Original data GEO bulk
130 Cor 24h -0.19 >More info -0.72 >More info Mock 24h Cor Original data GEO bulk
131 GSH -0.56 >More info -0.34 >More info control GSH treated seedlings Original data GEO bulk
132 root hypoxia pSHR 0.55 >More info 0.35 >More info root hypoxia total hypoxia root Original data GEO bulk
133 Col whole leaf 5 dpi -0.31 >More info -0.59 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
134 Tsu -Fe 48h Shoots -0.33 >More info -0.57 >More info Tsu +Fe 24h Shoots Original data GEO bulk
135 P.syringae AvrRpt2 4 h (leaf) -0.34 >More info -0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
136 cell culture 4 h phytoprostane A1 -0.34 >More info -0.55 >More info cell culture 4 h control Original data GEO bulk
137 eds16 whole leaf 6hpi 0.22 >More info 0.67 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
138 overexpresser LBD38 in -N 0.39 >More info 0.50 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
139 downy mildew cotyledons late stage -0.21 >More info -0.68 >More info mock inoculated Cotyledons Original data GEO bulk
140 sfr3 cold -0.24 >More info -0.65 >More info WT cold All aerial tissue Original data GEO bulk
141 WT AntimycinA 3h -0.33 >More info -0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
142 rosette leaves fdh -0.35 >More info -0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
143 21h-DC3000 hrpA 0.15 >More info 0.73 >More info 21h-DC3000 leaves Original data GEO bulk
144 agb1 -ABA LF -0.38 >More info -0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
145 efr-1 +elf18 10h 0.26 >More info 0.62 >More info WT +elf18 10h elf18 Original data GEO bulk
146 bak1-3 +Pep2 10h -0.29 >More info -0.59 >More info WT +Pep2 10h Pep2 Original data GEO bulk
147 Starch sheath 5 days MS incubation -0.32 >More info -0.55 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
148 R. solani AG2-1 -0.34 >More info -0.53 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
149 ice1 24H Cold -0.32 >More info -0.55 >More info WT 24H Cold Original data GEO bulk
150 pepr1-1 Pepr2-3 +Pep2 10h 0.28 >More info 0.59 >More info WT +Pep2 10h Pep2 Original data GEO bulk
151 WT powdery mildew -0.16 >More info -0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
152 hrcC -0.31 >More info -0.55 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
153 35S:RPS4 eds1-2 24h 0.30 >More info 0.56 >More info 35S:RPS4 24h leaves Original data
154 chalazal seed coat pre-globular 0.61 >More info 0.25 >More info whole seed sections pre-globular Original data GEO bulk
155 gh3.5-1D 48 hpi -0.27 >More info -0.59 >More info Col-0 uninoculated Original data GEO bulk
156 atmyc2 cop1 Seedling BL -0.35 >More info -0.51 >More info WT Seedling BL Original data GEO bulk
157 35S::PI ap3-3 35S::AP-GR +DEX -0.27 >More info -0.59 >More info 0hr DEX Original data GEO bulk
158 Elevated CO2 fully expanded leaf -0.26 >More info -0.60 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
159 Col-0 INA 6d -0.19 >More info -0.66 >More info Col-0 MOCK 6d Original data GEO bulk
160 anac017-2 AntimycinA 3h 0.33 >More info 0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
161 camta3-2 -0.13 >More info -0.72 >More info WT Original data GEO bulk
162 OE-HRA1 NS  -0.52 >More info -0.32 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
163 ataf1-1 mutant Col-0 Bgh inoculated -0.19 >More info -0.65 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
164 SCR-GR Time 1H Dex -0.29 >More info -0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
165 pvip1 pvip2 -0.18 >More info -0.66 >More info Col-0 whole rosettes Original data GEO bulk
166 WT H2O2 3h -0.28 >More info -0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
167 Seedling KUA1-IOX est -0.28 >More info -0.56 >More info Seedling KUA1-IOX mock Original data
168 Col-0 Flg22 4h -0.24 >More info -0.60 >More info Col-0 H2O 4h Original data GEO bulk
169 21h-DC3000 avrRpm1 0.23 >More info 0.61 >More info 21h-DC3000 leaves Original data GEO bulk
170 OH1 -0.25 >More info -0.59 >More info Col-0 leaves Original data GEO bulk
171 ABA SA 24h -0.22 >More info -0.62 >More info EtOH 24h 24hr Original data GEO bulk
172 pil5 red light -0.56 >More info -0.27 >More info Col-0 red light Original data GEO bulk
173 ASL9-ox 0.51 >More info 0.32 >More info WT aerial parts of seedlings Original data GEO bulk
174 oas-a1.1 Cd 18h -0.07 >More info -0.76 >More info Cd 18h root Root Original data GEO bulk
175 Pst-DC3000(avrRpm1)-4hpi -0.15 >More info -0.68 >More info Pst-DC3000-4hpi Original data GEO bulk
176 root columella root cap -S 0.51 >More info 0.31 >More info root columella root cap pH5.7 Original data GEO bulk
177 miR 0h -0.28 >More info -0.54 >More info Col 0h Leaf Original data GEO bulk
178 ataf1-1 mutant Col-0 Un-inoculated 0.28 >More info 0.53 >More info WT Col-0 Un-inoculated Original data GEO bulk
179 Col-0 C2H4 24h -0.27 >More info -0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
180 ptpks2 0.29 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
181 +1.6 mM Tween 20 1 h. -0.25 >More info -0.56 >More info +distilled water 1 h. Original data GEO bulk
182 seedlings-week-old RECA1-overexpressing
transgenic		 -0.15 >More info -0.66 >More info seedlings-week-old Col-0 seedlings Original data
183 Col-0 2HS -0.25 >More info -0.55 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
184 D2O -0.22 >More info -0.58 >More info H2O seedling Original data GEO bulk
185 prmt5-5 0.29 >More info 0.50 >More info WT Col continuous light Aerial tissue Original data GEO bulk
186 aox1a:rpoTmp untreated -0.24 >More info -0.55 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
187 leaf blade in D -0.22 >More info -0.57 >More info leaf blade in WL leaf blades Original data GEO bulk
188 Shoot apex inflorescence (after bolting) 0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
189 Mutant siz1-3 (Drought) -0.18 >More info -0.60 >More info Col-0 (Drought) Original data GEO bulk
190 siz1-3 drought -0.18 >More info -0.60 >More info Col-0 drought Original data GEO bulk
191 AtMYB30-as 90-105 min Xanthomonas -0.23 >More info -0.55 >More info WT 90-105 min Xanthomonas Original data GEO bulk
192 Methyl Jasmonate 1 h -0.20 >More info -0.57 >More info Mock 1 h Original data Basic hormone treatment of seedlings
193 eds16 whole leaf 5dpi 0.01 >More info 0.76 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
194 lht1 PstDC3000 48h -0.22 >More info -0.55 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
195 sid2 0.03 >More info 0.74 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
196 WT-SA -0.02 >More info -0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
197 opr3 JA 2 h -0.27 >More info -0.50 >More info opr3 0 h Original data GEO bulk
198 BLM+INA -0.23 >More info -0.54 >More info CK BLM and INA seedling Original data
199 shoot control pRBCS -0.59 >More info -0.17 >More info shoot control total Original data GEO bulk
200 sid2-avrB-6h 0.19 >More info 0.57 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
201 bZIP1ko mutant N+Light- 0.00 >More info -0.76 >More info WT-sib N+Light- whole plant Original data GEO bulk
202 hai1-2 low water potential -0.24 >More info -0.52 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
203 camta1/2/3 warm -0.20 >More info -0.56 >More info WT warm entire aerial part Original data GEO bulk
204 9 hr Hypoxia IP RNA -0.24 >More info -0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
205 SA 24h -0.19 >More info -0.56 >More info EtOH 24h 24hr Original data GEO bulk
206 seed germinating in countinuous light 24h SL 0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
207 root hypoxia pSCR 0.68 >More info 0.06 >More info root hypoxia total hypoxia root Original data GEO bulk
208 -Sulfate 24 h -0.18 >More info -0.55 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
209 cs26 long day -0.21 >More info -0.52 >More info Leaves-WT-LD leaf Original data GEO bulk
210 PAHs stress -0.16 >More info -0.57 >More info exp control phenanthrene whole plants Original data GEO bulk
211 WT (Col) glucose 0.22 >More info 0.51 >More info WT (Col) glucose seedlings Original data GEO bulk
212 S15-118 -0.09 >More info -0.64 >More info wt Original data GEO bulk
213 Col whole leaf 7dpi -0.04 >More info -0.68 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
214 Got7 UV -0.07 >More info -0.65 >More info Got7 mock UV seedling Original data
215 root epidermis and lateral root cap -S 0.17 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
216 lht1 untreated -0.18 >More info -0.53 >More info WT untreated untreated leaf Original data GEO bulk
217 DC3000 hrcC 2 h (leaf) -0.14 >More info -0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
218 aba3-1 -0.04 >More info -0.66 >More info wt Original data GEO bulk
219 Flagellin 4 h (leaf) -0.08 >More info -0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
220 WT Shoot Hypoxia -0.12 >More info -0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
221 Col ozone 3h -0.00 >More info -0.69 >More info Col clean-air 3h ozone Original data GEO bulk
222 vtc2 (I) -0.02 >More info -0.66 >More info Col (I) rosette Original data GEO bulk
223 WT +elf18 10h -0.13 >More info -0.55 >More info WT untreated elf18 Original data GEO bulk
224 35S::ERF104 Flg22 4h -0.09 >More info -0.59 >More info 35S::ERF104 H2O 4h Original data GEO bulk
225 eds16 whole leaf 7dpi 0.10 >More info 0.58 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
226 CAX1/CAX3 mutant -0.11 >More info -0.57 >More info Col whole plant Original data GEO bulk
227 hrpA 7h -0.10 >More info -0.58 >More info Mock 7h hrpA Original data GEO bulk
228 L2.5 mutant 0.51 >More info 0.16 >More info Wt Original data GEO bulk
229 E.orontii Infection 3 day -0.03 >More info -0.64 >More info Uninfection 3 day Original data Elicitor treatments
230 fls1-3 -0.14 >More info -0.53 >More info Col-0 Rosette leaves Original data
231 seedlings protease IV -0.13 >More info -0.54 >More info seedlings nontreated control whole seedling Original data
232 mkk1/mkk2 control rep -0.09 >More info -0.58 >More info Col-0 Time 0 rep Original data GEO bulk
233 mpk6-ko Flg22 4h -0.10 >More info -0.57 >More info mpk6-ko H2O 4h Original data GEO bulk
234 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
235 Mutant siz1-3 0.02 >More info -0.67 >More info Col-0 Original data GEO bulk
236 Ba1 UV -0.10 >More info -0.55 >More info Ba1 mock UV seedling Original data
237 siz1-3 control 0.02 >More info -0.67 >More info Col-0 control Original data GEO bulk
238 Mutant sav3-2 (SH) 0.01 >More info -0.65 >More info Col-0 (SH) Original data GEO bulk
239 coi1-2 -0.03 >More info -0.61 >More info Col-0 mock Whole seedling Original data GEO bulk
240 opr3 OPDA 2 h -0.09 >More info -0.55 >More info opr3 0 h Original data GEO bulk
241 sav3-2 shade 0.01 >More info -0.65 >More info Col-0 shade seedlings Original data GEO bulk
242 rpoTmp(line) untreated -0.09 >More info -0.55 >More info WT(Col0) untreated (control rpoTmp) leaf Original data
243 Heat shock 30%Inhibition -0.57 >More info -0.07 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
244 sng1 -0.54 >More info -0.09 >More info WT aerial region Original data GEO bulk
245 ERF96OE -0.08 >More info -0.55 >More info WT leaf Original data
246 AhNAS2-RNAi +Zn -0.50 >More info -0.12 >More info WT +Zn Root Original data GEO bulk
247 AgNO3 3 h -0.09 >More info -0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
248 Mock pft1 leaf -0.02 >More info -0.60 >More info Mock Col-0 leaf water leaf Original data GEO bulk
249 Root wt CLE10 -0.03 >More info -0.59 >More info Root wt CLE25 root tip Original data GEO bulk
250 low CO2 + dark -0.08 >More info -0.54 >More info normal CO2 + light Original data GEO bulk
251 WT-NOCO2 INFECTED 0.01 >More info -0.62 >More info WT-MOCK Original data GEO bulk
252 ckh1 CK200 -0.11 >More info -0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
253 bio4-1 mutant leaves -0.09 >More info -0.52 >More info WT leaves leaves Original data GEO bulk
254 bak1-3 untreated -0.08 >More info -0.53 >More info WT untreated untreated Original data GEO bulk
255 OE WRKY40.4 high light -0.09 >More info -0.52 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
256 vte2-1 3d vernalization -0.10 >More info -0.51 >More info WT 3d vernalization Original data GEO bulk
257 root cells endodermis 140mM NaCl 1 hour -0.54 >More info -0.06 >More info root cells endodermis standard 1 hour root cells endodermis Original data
258 Col-0 mbs1-1 HL 3h 0.04 >More info 0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
259 Laer pretreat GA+JA Flg22 2h -0.57 >More info -0.03 >More info Laer pretreat water control leaf discs Original data GEO bulk
260 Col BTH -0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
261 opr3 JA 0.5 h 0.11 >More info -0.70 >More info opr3 0 h Original data GEO bulk
262 seedling h S Exp -0.00 >More info 0.59 >More info seedling -S Exp seedling Original data
263 sfr6 drought 0.05 >More info 0.53 >More info WT drought All aerial tissue Original data GEO bulk
264 46T-CK -0.04 >More info -0.54 >More info WT-CK none Original data
265 npr1 sni1 ssn2 0.07 >More info 0.50 >More info npr1 sni1 water water seedling Original data GEO bulk
266 mil4 BTH -0.01 >More info -0.56 >More info Col BTH rosettes Original data GEO bulk
267 WT Col-0 Bgh inoculated 0.01 >More info -0.58 >More info WT Col-0 Un-inoculated Original data GEO bulk
268 cdpk6-yfp -0.51 >More info -0.04 >More info Kan seedlings Original data GEO bulk
269 vtc1 (II) -0.05 >More info -0.50 >More info Col (II) rosette Original data GEO bulk
270 ara1/2mut 0.03 >More info 0.52 >More info Col-3 Original data GEO bulk
271 CeO2 germinant 0.04 >More info 0.50 >More info Millipore Water germinant CeO2 seedling Original data
272 opr3 JA 22 h -0.50 >More info -0.03 >More info opr3 0 h Original data GEO bulk
273 PNO8 3 h 0.05 >More info -0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
274 camta2/3 warm 0.06 >More info -0.57 >More info WT warm entire aerial part Original data GEO bulk
275 camta1/2/3 24h cold -0.00 >More info -0.50 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
276 Mutant sav3-2 (WL) 0.11 >More info -0.60 >More info Col-0 (WL) Original data GEO bulk
277 WT+H2O2 0.02 >More info -0.51 >More info WT H2O2 Original data GEO bulk
278 sav3-2 light 0.11 >More info -0.60 >More info Col-0 light seedlings Original data GEO bulk
279 A6 mutant 0.09 >More info -0.57 >More info WT rosette leaves Rosette leaves Original data GEO bulk
280 root - 04% oxygen - 2h 0.32 >More info -0.79 >More info root - 21% oxygen - 2h Original data GEO bulk
281 Stem tissue 5 days NAA 0.14 >More info -0.61 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
282 Seedling-control POLYSOMESmRNA -0.54 >More info 0.08 >More info Seedling-control TOTALmRNA seedling Original data
283 Col laser microdissected 5 dpi 0.04 >More info -0.50 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
284 rsa3-1 Na 24h 0.17 >More info -0.63 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
285 bio4-1 mutant watered00µM biotin leaves -0.09 >More info 0.54 >More info bio4-1 mutant leaves leaves Original data GEO bulk
286 root - 08% oxygen - 2h 0.20 >More info -0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
287 IAA7mII over-expressor IAA Treated -0.26 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
288 expressing C2 MeJA -0.11 >More info 0.53 >More info LUC2T Original data GEO bulk
289 Heat shock optimum -0.23 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
290 eds16 whole leaf 0h UI -0.28 >More info 0.70 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
291 OE WRKY63.3 0.16 >More info -0.56 >More info OE WRKY40.4 none leaf Original data GEO bulk
292 root - 04% oxygen - 30min 0.17 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
293 SHR-GR Time 12H Dex -0.13 >More info 0.52 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
294 Methyl Jasmonate 3 h 0.17 >More info -0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
295 Mutant ufo-1(flower) 0.15 >More info -0.50 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
296 CCA1-ox 6am non-polysomal -0.17 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
297 siliques AtHb1 control -0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
298 AtMinD1 Prolonged-induction 0.24 >More info -0.53 >More info Control whole plant Original data GEO bulk
299 amiRAP aerobic -0.29 >More info 0.55 >More info WT aerobic aerobic Original data GEO bulk
300 Laer pretreat GA Flg22 1h -0.45 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
301 35S:GIF 0.53 >More info -0.29 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
302 E.orontii Infection 6 h 0.27 >More info -0.50 >More info Uninfection 6 h Original data Elicitor treatments
303 short 14-degree- -0.37 >More info 0.55 >More info control short Original data GEO bulk
304 Col light-dark EtOH -0.58 >More info 0.41 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
305 Red/FR Light45min 0.38 >More info -0.53 >More info FarRed Light 45min Original data Light treatments
306 Col0-PsmES4326-24hpi -0.47 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
307 Leafminer damaged seedlings -0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk