4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Osmotic Stress 24 h (root)
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Osmotic Stress 24 h (root)"  Help Download transcriptome of top 30
Score Experiment Correlation from
Osmotic Stress 24 h (root)		 Correlation to
Osmotic Stress 24 h (root)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Osmotic Stress 24 h (root) 1.00 >More info 1.00 >More info Stress mock 24 h (root) Original data Stress treatments
2 whole roots 140 mM NaCl 4 hour 0.82 >More info 0.86 >More info whole roots standard Original data GEO bulk
3 Salt Stress 24 h (root) 0.89 >More info 0.78 >More info Stress mock 24 h (root) Original data Stress treatments
4 whole roots 140 mM NaCl 16 hour 0.81 >More info 0.80 >More info whole roots standard Original data GEO bulk
5 ABA 3 h 0.76 >More info 0.79 >More info Mock 3 h Original data Basic hormone treatment of seedlings
6 whole roots 140 mM NaCl 32 hour 0.75 >More info 0.79 >More info whole roots standard Original data GEO bulk
7 rosettes WT drought 0.72 >More info 0.76 >More info rosettes WT watered Original data GEO bulk
8 root BA 12h 0.70 >More info 0.76 >More info root control 12h boron (5mM) root Original data GEO bulk
9 rosettes myoox drought 0.69 >More info 0.76 >More info rosettes myoox watered Original data GEO bulk
10 ABA DFPM 0.74 >More info 0.70 >More info control Original data GEO bulk
11 NaCl Col 0.59 >More info 0.83 >More info Col Original data GEO bulk
12 Osmotic Stress 24 h (shoot) 0.71 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
13 C2 leaf-drought 0.70 >More info 0.70 >More info C2 leaf-well watered Original data GEO bulk
14 ABA 24h 0.64 >More info 0.76 >More info EtOH 24h 24hr Original data GEO bulk
15 root endodermis and quiescent center 40 mM NaCl 0.60 >More info 0.79 >More info root endodermis and quiescent center Original data GEO bulk
16 Col-0 0h NAA 0.64 >More info 0.74 >More info Col-0 6h MOCK Original data GEO bulk
17 whole roots 140 mM NaCl 1 hour 0.62 >More info 0.76 >More info whole roots standard Original data GEO bulk
18 ABA 0.63 >More info 0.74 >More info control Original data GEO bulk
19 hai1-2 low water potential 0.69 >More info 0.68 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
20 ABA JA 24h 0.56 >More info 0.81 >More info EtOH 24h 24hr Original data GEO bulk
21 rosettes atx drought 0.70 >More info 0.67 >More info rosettes atx watered Original data GEO bulk
22 root longitudinal zone-4 NaCl 0.58 >More info 0.77 >More info root longitudinal zone-4 Original data GEO bulk
23 WT leaf-drought 0.67 >More info 0.67 >More info WT leaf-well watered Original data GEO bulk
24 rosettes drought 0.66 >More info 0.68 >More info rosettes watered Original data GEO bulk
25 ABA+DMTU 0.60 >More info 0.74 >More info control Original data GEO bulk
26 T6 leaf-drought 0.61 >More info 0.71 >More info T6 leaf-well watered Original data GEO bulk
27 WT (Col-0) inflorescence drought day 5 0.66 >More info 0.65 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
28 root cells cortex 140mM NaCl 1 hour 0.61 >More info 0.70 >More info root cells cortex standard 1 hour root cells cortex Original data
29 root stele 40 mM NaCls 0.58 >More info 0.73 >More info root stele Original data GEO bulk
30 ABA 1 h 0.56 >More info 0.74 >More info Mock 1 h Original data Basic hormone treatment of seedlings
31 root cells stele 140mM NaCl 1 hour 0.62 >More info 0.68 >More info root cells stele standard 1 hour root cells stele Original data
32 6h +Pi -0.57 >More info -0.73 >More info 6h -Pi root Original data GEO bulk
33 whole roots 140 mM NaCl 30 minutes 0.49 >More info 0.80 >More info whole roots standard Original data GEO bulk
34 low CO2 + light 0.52 >More info 0.76 >More info normal CO2 + light Original data GEO bulk
35 root columella root cap 40 mM NaCl 0.58 >More info 0.70 >More info root columella root cap Original data GEO bulk
36 ABA SA 3h 0.56 >More info 0.70 >More info EtOH 3h 3hr Original data GEO bulk
37 Salt Stress 24 h (shoot) 0.65 >More info 0.60 >More info Stress mock 24 h (shoot) Original data Stress treatments
38 Col-0 under 4 days salt 0.60 >More info 0.65 >More info Col-0 under control 4 days salt treatment rosette Original data
39 root Dosed gold 0.65 >More info 0.60 >More info root No gold .125 mM gold 24 h roots Original data
40 ABA SA 24h 0.52 >More info 0.73 >More info EtOH 24h 24hr Original data GEO bulk
41 0.125 mM gold 24 h 0.65 >More info 0.60 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
42 slr-1 0h NAA -0.61 >More info -0.63 >More info Col-0 0h NAA Original data GEO bulk
43 UV Stress 24 h (root) 0.58 >More info 0.65 >More info Stress mock 24 h (root) Original data Stress treatments
44 T8 leaf-drought 0.59 >More info 0.63 >More info T8 leaf-well watered Original data GEO bulk
45 24h +Pi -0.53 >More info -0.69 >More info 24h -Pi root Original data GEO bulk
46 Anoxia 0.52 >More info 0.69 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
47 low water potential 0.61 >More info 0.60 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
48 SA 4mM 0.43 >More info 0.78 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
49 Col-O high light 0.60 >More info 0.60 >More info Col-O bule light Original data GEO bulk
50 Roots Cd -0.49 >More info -0.71 >More info Roots control Cd Root Original data GEO bulk
51 ABA JA 3h 0.47 >More info 0.73 >More info EtOH 3h 3hr Original data GEO bulk
52 RRE1 Chitin 0.58 >More info 0.61 >More info Chitin Original data GEO bulk
53 Heat and anoxia 0.53 >More info 0.66 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
54 arr10 arr12 -0.51 >More info -0.65 >More info DMSO--WT DMSO roots Original data GEO bulk
55 Seedling-HeatStressed POLYSOMESmRNA 0.56 >More info 0.60 >More info Seedling-control POLYSOMESmRNA seedling Original data
56 low CO2 + dark 0.51 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
57 WT (Col) glucose -0.47 >More info -0.69 >More info WT (Col) glucose seedlings Original data GEO bulk
58 dicamba 0.60 >More info 0.55 >More info WT mock whole seedling Original data GEO bulk
59 iron minus 0 h 0.45 >More info 0.70 >More info iron +0 h root Original data GEO bulk
60 bak1-3 +Pep2 10h 0.54 >More info 0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
61 WT salt 12 h 0.62 >More info 0.52 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
62 Cold Stress 24 h (root) 0.62 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
63 root cells endodermis 140mM NaCl 1 hour 0.49 >More info 0.65 >More info root cells endodermis standard 1 hour root cells endodermis Original data
64 plant (tga2-5-6) 4h phytoprostane A1 0.44 >More info 0.70 >More info plant (tga2-5-6) 4h control Original data GEO bulk
65 root longitudinal zone-3 NaCl 0.45 >More info 0.69 >More info root longitudinal zone-3 Original data GEO bulk
66 Col-0 +ABA LF 0.50 >More info 0.63 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
67 3x(p) 0.51 >More info 0.62 >More info 2x two week old seedlings Original data
68 WT 30μM arsenate 8 hours. 0.54 >More info 0.59 >More info WT control (not supplemented). Original data
69 Cocultivation 8 hrs root 0.47 >More info 0.66 >More info Mock cocultivation 8 hrs root Root Original data
70 6 h SL WT -0.54 >More info -0.58 >More info 0 h WT seed Original data
71 Fenclorim 24hr 0.55 >More info 0.57 >More info Acetone 24hr root Original data GEO bulk
72 Seedling-HeatStressed TOTALmRNA 0.54 >More info 0.58 >More info Seedling-control TOTALmRNA seedling Original data
73 root cells stele 140mM NaCl 3 hours 0.50 >More info 0.62 >More info root cells stele standard 1 hour root cells stele Original data
74 sfr6 drought -0.44 >More info -0.68 >More info WT drought All aerial tissue Original data GEO bulk
75 root epidermis and lateral root cap 40 mM NaCl 0.48 >More info 0.63 >More info root epidermis and lateral root cap Original data GEO bulk
76 hog1-7 -0.64 >More info -0.46 >More info wt whole seedling Original data GEO bulk
77 mutant-line774 -0.64 >More info -0.46 >More info WT-control whole plant Original data GEO bulk
78 Col0-PsmES4326-24hpi 0.49 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
79 WT Seedling BL+ABA 0.56 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
80 CMP 4hr 0.55 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
81 RRE2 Chitin 0.59 >More info 0.50 >More info Chitin Original data GEO bulk
82 root cortex 40 mM NaCl 0.51 >More info 0.58 >More info root cortex Original data GEO bulk
83 Phytoprostane A1 4 h 0.49 >More info 0.59 >More info Col-0 Original data GEO bulk
84 inhibitor A Treated 0.44 >More info 0.64 >More info Negative Control Original data GEO bulk
85 DUO1 induced 24h 0.53 >More info 0.54 >More info 24hr-not-induced whole plant Original data GEO bulk
86 CMP 24hr 0.58 >More info 0.49 >More info Acetone 24hr root Original data GEO bulk
87 Root dark control 24h 0.48 >More info 0.59 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
88 WT (Col-0) inflorescence drought day 10 0.57 >More info 0.49 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
89 24h SL WT -0.54 >More info -0.52 >More info 0 h WT seed Original data
90 Col-0 flu HL 3h 0.52 >More info 0.54 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
91 spch 0.50 >More info 0.56 >More info Col-0 WT whole seedling Original data GEO bulk
92 (Col-0)+200 uM As 0.51 >More info 0.55 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
93 WT 24H Cold 0.52 >More info 0.54 >More info WT control Original data GEO bulk
94 root longitudinal zone-1 NaCl 0.42 >More info 0.64 >More info root longitudinal zone-1 Original data GEO bulk
95 9 hr Hypoxia Total RNA 0.45 >More info 0.61 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
96 Root dark control 7h 0.51 >More info 0.54 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
97 8-DAC chr11-1chr17-1 0.51 >More info 0.54 >More info 8-DAC Col-0 leaf explants Original data
98 dorn1-1 Root 100 mM ATP 30 min -0.37 >More info -0.68 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
99 seedling h S Exp -0.32 >More info -0.73 >More info seedling -S Exp seedling Original data
100 NJ15 0.47 >More info 0.58 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
101 DUO1 induced 12h 0.56 >More info 0.48 >More info 12hr-not-induced whole plant Original data GEO bulk
102 Col-0 low oxygen 0.47 >More info 0.57 >More info Col-0 control low oxygen root Original data GEO bulk
103 root cells cortex 140mM NaCl 8 hours 0.46 >More info 0.58 >More info root cells cortex standard 1 hour root cells cortex Original data
104 6 h SL Attim 17-1 1 -0.49 >More info -0.55 >More info 0 h Attim 17-1 1 seed Original data
105 3m.KCl 0.55 >More info 0.48 >More info To. KCl 14 day old Roots Original data GEO bulk
106 coi1-2 0.52 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
107 K starvation (root) 0.53 >More info 0.50 >More info Ws (root) Original data GEO bulk
108 Root -K 0.53 >More info 0.50 >More info Control-root Original data GEO bulk
109 JA 24h 0.38 >More info 0.65 >More info EtOH 24h 24hr Original data GEO bulk
110 9 hr Hypoxia 1 hr recovery Total RNA 0.43 >More info 0.60 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
111 dorn1-1 Root MES buffer 30 min -0.41 >More info -0.62 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
112 PNO8 12 h 0.43 >More info 0.59 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
113 WT H2O2 3h 0.37 >More info 0.65 >More info WT water 3h 3h_H2O2 Original data GEO bulk
114 WT (Col-0) inflorescence moderate drought day 5 0.49 >More info 0.53 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
115 Dark 2day hml 0.56 >More info 0.45 >More info 0h hml Original data
116 ced1 -0.52 >More info -0.49 >More info WT PEG 6hr seedlings Original data GEO bulk
117 Homozygous-AtcesA4 0.45 >More info 0.56 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
118 JA 0.44 >More info 0.57 >More info Col-0 mock Whole seedling Original data GEO bulk
119 Col in Pi deficiency medium 0.43 >More info 0.57 >More info Col in control medium root Original data GEO bulk
120 high-R:FR bud axillary -0.45 >More info -0.55 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
121 gun4-1 0.54 >More info 0.45 >More info WT Col-0 seedling Original data GEO bulk
122 24h SL Attim 17-1 1 -0.50 >More info -0.49 >More info 0 h Attim 17-1 1 seed Original data
123 P.p 30hai 0.51 >More info 0.48 >More info At-Control roots Original data GEO bulk
124 Prohexadione 3 h 0.34 >More info 0.65 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
125 5-Triiodobenzoic acid3 h 0.43 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
126 OPDA 4 h 0.47 >More info 0.52 >More info Col-0 Original data GEO bulk
127 plant (Col-0) 4h OPDA 0.47 >More info 0.52 >More info plant (Col-0) 4h control Original data GEO bulk
128 Homozygous-AtcesA6 0.44 >More info 0.55 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
129 Fenclorim 4hr 0.48 >More info 0.51 >More info Acetone 4hr root Original data GEO bulk
130 detached inflorescences 24h 0.47 >More info 0.52 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
131 sfr3 control 0.43 >More info 0.56 >More info WT control All aerial tissue Original data GEO bulk
132 dark-hs 0.41 >More info 0.58 >More info dark-control seedling Original data
133 Col-0 leaf drought 0.54 >More info 0.44 >More info Col-0 leaf water leaf Original data GEO bulk
134 Col-0 C2H4 24h 0.44 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
135 Root wt CLE10 0.36 >More info 0.62 >More info Root wt CLE25 root tip Original data GEO bulk
136 (Col-0)+100 uM As 0.46 >More info 0.52 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
137 WT 3H Cold 0.36 >More info 0.62 >More info WT control Original data GEO bulk
138 root longitudinal zone-2 NaCl 0.38 >More info 0.60 >More info root longitudinal zone-2 Original data GEO bulk
139 root cells stele 140mM NaCl 32 hours 0.43 >More info 0.55 >More info root cells stele standard 1 hour root cells stele Original data
140 root cells endodermis 140mM NaCl 3 hours 0.45 >More info 0.53 >More info root cells endodermis standard 1 hour root cells endodermis Original data
141 nas4x roots + Fe -0.56 >More info -0.41 >More info WT roots + Fe Roots Original data GEO bulk
142 mutant-line1135 -0.60 >More info -0.37 >More info WT-control whole plant Original data GEO bulk
143 rdr6-15 -0.50 >More info -0.47 >More info Col-0 Original data GEO bulk
144 ddm1-12 -0.60 >More info -0.37 >More info wt whole seedling Original data GEO bulk
145 Col-0 drought 0.50 >More info 0.47 >More info Col-0 control Original data GEO bulk
146 Heat 0.44 >More info 0.53 >More info Control 90 minutes at 38°C. Original data GEO bulk
147 Root submergence 24h 0.42 >More info 0.55 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
148 afb3-1 2h KNO3 0.33 >More info 0.64 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
149 cngc4 0.41 >More info 0.56 >More info Ws-2 Seedlings Original data GEO bulk
150 root cells stele 140mM NaCl 8 hours 0.41 >More info 0.56 >More info root cells stele standard 1 hour root cells stele Original data
151 hira-root -0.44 >More info -0.53 >More info WT-root root Original data
152 aox1a:rpoTmp MLD stressed -0.42 >More info -0.55 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
153 Dark 3day hml 0.51 >More info 0.45 >More info 0h hml Original data
154 Dark 3day wt 0.52 >More info 0.44 >More info 0h wt Original data
155 QC pSCR(QC pSCRBRI1) 3h BL 0.34 >More info 0.62 >More info QC pSCR(QC pSCRBRI1) 0h BL brassinosteroid root Original data
156 plant (Col-0) 4h phytoprostane A1 0.45 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
157 flu 0.35 >More info 0.61 >More info WT Col Original data GEO bulk
158 PIF5ox high R/FR 0.46 >More info 0.50 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
159 2 hr Hypoxia Total RNA 0.46 >More info 0.50 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
160 4d red light grown hmr-5 seedlings 0.42 >More info 0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
161 48 h S WT -0.46 >More info -0.50 >More info 0 h WT seed Original data
162 Mutant gh3.5-1D (AvrRpt2) 0.38 >More info 0.57 >More info Col-0 (AvrRpt2) Original data GEO bulk
163 WT Shoot-Pi 0.42 >More info 0.53 >More info WT Shoot+Pi shoots Original data GEO bulk
164 Root submergence 7h 0.43 >More info 0.52 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
165 pepr1-1 Pepr2-3 +Pep2 10h -0.43 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
166 9 hr Hypoxia IP RNA 0.37 >More info 0.58 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
167 root cells cortex 140mM NaCl 48 hours 0.40 >More info 0.54 >More info root cells cortex standard 1 hour root cells cortex Original data
168 Dark 3day ivd 0.50 >More info 0.44 >More info 0h ivd Original data
169 phr1 Shoot-Pi 0.43 >More info 0.51 >More info WT Root-Pi shoots Original data GEO bulk
170 phr1 Root-Pi 0.44 >More info 0.50 >More info WT Root+Pi roots Original data GEO bulk
171 21h-DC3000 hrpA -0.24 >More info -0.70 >More info 21h-DC3000 leaves Original data GEO bulk
172 WT AntimycinA 3h 0.43 >More info 0.51 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
173 Botrytis cinerea 48h 0.40 >More info 0.53 >More info control 48h Original data GEO bulk
174 NFA8 roots 2hr KNO3 nitrogen 0.40 >More info 0.53 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
175 tetraploid 0.35 >More info 0.58 >More info diploid Original data GEO bulk
176 Leafminer damaged seedlings 0.36 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
177 Col0 roots 2hr KNO3 nitrogen -0.24 >More info -0.68 >More info Col0 roots 2hr KCl control root Original data GEO bulk
178 Col-0 2HS 0.38 >More info 0.54 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
179 sex1-3 0.33 >More info 0.59 >More info Col-WT leaves Original data GEO bulk
180 IMI 4mM 0.35 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
181 pip3 At2g19270 RNAi 32 0.53 >More info 0.38 >More info Nd-1 whole plant Original data GEO bulk
182 4h decapitation -0.41 >More info -0.50 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
183 Col-0 HS 0.22 >More info 0.69 >More info Col-0 control heat shocked seedling Original data GEO bulk
184 naxillin 3h 0.41 >More info 0.50 >More info before treatment naxillin root Original data GEO bulk
185 WT (Col-0) heat shock 0.22 >More info 0.69 >More info WT (Col-0) whole seedling Original data GEO bulk
186 Dark 2day wt 0.51 >More info 0.39 >More info 0h wt Original data
187 8hr-pH4.5 0.35 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
188 8h-DC3000 avrRpm1 0.38 >More info 0.52 >More info 8h-DC3000 leaves Original data GEO bulk
189 WT+H2O2 0.35 >More info 0.55 >More info WT H2O2 Original data GEO bulk
190 flu over-tAPX 0.30 >More info 0.60 >More info WT Col Original data GEO bulk
191 R. solani AG8 0.32 >More info 0.58 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
192 lib -0.36 >More info -0.53 >More info WT whole seedling Original data GEO bulk
193 Differentiation 36h -0.38 >More info -0.51 >More info Differentiation 0h leaves Original data
194 cop1 Seedling BL 0.29 >More info 0.60 >More info WT Seedling BL Original data GEO bulk
195 til1-1 22C 0.33 >More info 0.55 >More info Col-0 22C Original data GEO bulk
196 Col-0 37C 0.37 >More info 0.51 >More info Col-0 22C Original data GEO bulk
197 9 hr Hypoxia 1 hr recovery IP RNA 0.35 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
198 Leafminer locally damaged thaliana seedlings 0.36 >More info 0.52 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
199 Ws leaf 100mM NaCl 0.31 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
200 Ws 100mM NaCl 0.31 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
201 dor drought 0.54 >More info 0.32 >More info WT drought Original data GEO bulk
202 siliques AtHb1 control 0.34 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
203 tor mutant glucose 0.34 >More info 0.52 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
204 Col-0 +ABA GC 0.35 >More info 0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
205 rpoTmp(line) MLD stressed 0.36 >More info 0.50 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
206 tfl1-1-16ºC 0.31 >More info 0.54 >More info WT-16ºC Original data GEO bulk
207 lug3 leaves -0.31 >More info -0.54 >More info WT-leaves matured rosette leaves Original data GEO bulk
208 safener treated 0.34 >More info 0.51 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
209 root cells epidermis 140mM NaCl 1 hour 0.34 >More info 0.51 >More info root cells epidermis standard 1 hour root cells epidermis Original data
210 WT 30μM phosphate 8 hours. -0.30 >More info -0.55 >More info WT control (not supplemented). Original data
211 Split KNO3 roots - 2days -0.28 >More info -0.57 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
212 35S::MBF1c 0.28 >More info 0.57 >More info control Original data GEO bulk
213 atmyc2 cop1 Seedling BL 0.35 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
214 Dark 40 min pls UV-A 5 min 0.50 >More info 0.34 >More info Dark 45 min Original data Light treatments
215 rid4 IBA -0.52 >More info -0.32 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
216 inhibitor B Treated 0.31 >More info 0.53 >More info Negative Control Original data GEO bulk
217 SCR-GR Time 12H Dex 0.31 >More info 0.53 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
218 stn7-1 -0.32 >More info -0.52 >More info Col-0 rosette leaves Original data GEO bulk
219 myb3 myb3r4d 0.17 >More info 0.66 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
220 cell culture 4 h phytoprostane A1 0.26 >More info 0.57 >More info cell culture 4 h control Original data GEO bulk
221 1h +Pi -0.26 >More info -0.56 >More info 1h -Pi root Original data GEO bulk
222 Ws HS 0.19 >More info 0.63 >More info Ws control heat shocked seedling Original data GEO bulk
223 spx1 spx2 no Pi 0.52 >More info 0.29 >More info WT no Pi seedlings Original data
224 JA 3h 0.17 >More info 0.64 >More info EtOH 3h 3hr Original data GEO bulk
225 rdr6-15 -0.31 >More info -0.50 >More info Col-0 plant inflorescence Original data
226 SHR-GR Time 12H Dex -0.27 >More info -0.53 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
227 Pst-DC3000(avrRpm1)-4hpi 0.28 >More info 0.52 >More info Pst-DC3000-4hpi Original data GEO bulk
228 aux1 mutant roots ethylene 0.20 >More info 0.60 >More info roots air Original data GEO bulk
229 Whole root - low pH 48H -0.24 >More info -0.55 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
230 VND6 0h -0.20 >More info -0.58 >More info wt 0h Original data GEO bulk
231 nhx5-2/nhx6 0.27 >More info 0.51 >More info WT Rosette leaf Original data GEO bulk
232 shoots bhlh100/101 100uM Fe -0.24 >More info -0.54 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
233 CCA14 dark early 0.23 >More info 0.55 >More info Col dark early Original data GEO bulk
234 Full C2 T1 -0.26 >More info -0.52 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
235 Full C2 T2 0.21 >More info 0.57 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
236 Apex mir-3TCP 14DAS -0.27 >More info -0.50 >More info Apex Col 14DAS Original data GEO bulk
237 rosette leaves fdh 0.26 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
238 Dry late day 0.24 >More info 0.53 >More info Wet late day water-limited whole rosette Original data GEO bulk
239 ACN1-2 -0.27 >More info -0.50 >More info col-7 Original data GEO bulk
240 Laer pretreat GA Flg22 1h 0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
241 ptpks2 -0.14 >More info -0.62 >More info Col-WT leaves Original data GEO bulk
242 21h-DC3000 avrRpm1 -0.20 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
243 root longitudinal zone-1 low sulfur -0.23 >More info -0.53 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
244 1 h Light IP RNA -0.24 >More info -0.52 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
245 Var2-1 roots 2hr KNO3 nitrogen 0.26 >More info 0.50 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
246 QC pSCR 3h BL 0.21 >More info 0.54 >More info QC pSCR 0h BL brassinosteroid root Original data
247 GA 120min 0.17 >More info 0.58 >More info CON120 GA 120 min. root tips Original data GEO bulk
248 cat2-short-day 2d 0.23 >More info 0.52 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
249 Light 3day hml 0.15 >More info 0.59 >More info 0h hml Original data
250 Protoplast Induced 0.19 >More info 0.55 >More info Uninduced Original data GEO bulk
251 Kas-1 -Fe 24h -0.23 >More info -0.50 >More info Kas-1 +Fe 24h roots Original data GEO bulk
252 Kas -Fe 24h Roots -0.23 >More info -0.50 >More info Kas +Fe 24h Roots Original data GEO bulk
253 Col BTH 0.06 >More info 0.67 >More info Col rosettes Original data GEO bulk
254 tt4 UV 0.56 >More info 0.16 >More info UV aerial region Original data GEO bulk
255 root longitudinal zone-2 pH 4.6 0.21 >More info 0.51 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
256 WT Shoot Hypoxia 0.21 >More info 0.51 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
257 oligomycin 1 h 0.14 >More info 0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
258 AsAKiin11 T2 0.08 >More info 0.64 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
259 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
260 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
261 ATR1 OE 0.20 >More info 0.51 >More info WT for ATR1/MYB51 Original data GEO bulk
262 root longitudinal zone-3 low sulfur -0.19 >More info -0.51 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
263 toc1-1-53hr 0.13 >More info 0.56 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
264 SCR-GR Time 1H Dex 0.08 >More info 0.61 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
265 3x(m) 0.07 >More info 0.62 >More info 2x two week old seedlings Original data
266 root longitudinal zone-4 low sulfur -0.14 >More info -0.53 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
267 gun1gun5 far-red pretreated -0.17 >More info -0.50 >More info WT far-red pretreated Original data GEO bulk
268 Col ozone 3h 0.16 >More info 0.50 >More info Col clean-air 3h ozone Original data GEO bulk
269 ara1/2mut -0.06 >More info -0.60 >More info Col-3 Original data GEO bulk
270 cat2-short-day 4d 0.08 >More info 0.57 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
271 toc1-1-85hr 0.11 >More info 0.50 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
272 Heat shock optimum -0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
273 G3P -0.03 >More info -0.58 >More info Mock distal leaves Original data GEO bulk
274 Leaf wounded 0.07 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
275 chl1-5 Nitrate 0.5h 0.06 >More info 0.54 >More info WT Nitrate 0.5h Original data GEO bulk
276 arr10 arr12 tZ -0.10 >More info -0.50 >More info tZ trans-zeatin roots Original data GEO bulk
277 2hr continuous KNO3 and MSX PeR cell -0.05 >More info -0.54 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
278 ABA 0.79 >More info -0.22 >More info control Original data GEO bulk
279 Light 3day ivd -0.02 >More info -0.55 >More info 0h ivd Original data
280 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
281 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
282 sim smr1 -0.00 >More info -0.50 >More info WT seedling Original data GEO bulk
283 opr3 JA 0.5 h -0.06 >More info 0.55 >More info opr3 0 h Original data GEO bulk
284 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
285 lateral root cap-columella pBRN2 8h BL -0.11 >More info 0.55 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
286 oas-a1.1 root 0.07 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
287 WT roots - Fe 0.17 >More info -0.58 >More info WT roots + Fe Roots Original data GEO bulk