4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on phyB mutant 22C 10hrs
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List of experiments correlated with "phyB mutant 22C 10hrs"  Help Download transcriptome of top 30
Score Experiment Correlation from
phyB mutant 22C 10hrs		 Correlation to
phyB mutant 22C 10hrs		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phyB mutant 22C 10hrs 1.00 >More info 1.00 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
2 phyB mutant 22C 4hrs 0.81 >More info 0.89 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
3 INA -0.81 >More info -0.65 >More info CK INA seedling Original data
4 Mutant NahG(leaf) 0.77 >More info 0.64 >More info Col-0 (leaf) Original data GEO bulk
5 Col-0 INA 6d -0.73 >More info -0.66 >More info Col-0 MOCK 6d Original data GEO bulk
6 Col-0 INA 48h -0.73 >More info -0.65 >More info Col-0 MOCK 48h Original data GEO bulk
7 camta3-2 -0.75 >More info -0.62 >More info WT Original data GEO bulk
8 Elevated CO2 AMPLE N DAY -0.74 >More info -0.62 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
9 UV Stress 24 h (shoot) -0.74 >More info -0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
10 Col-0 DCA 48h -0.72 >More info -0.63 >More info Col-0 MOCK 48h Original data GEO bulk
11 PstDC3000 48h -0.81 >More info -0.51 >More info WT untreated 48hr leaf Original data GEO bulk
12 sid2 0.73 >More info 0.59 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
13 eds16 whole leaf 7d UI 0.75 >More info 0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
14 camta3-1 -0.83 >More info -0.48 >More info WT Original data GEO bulk
15 eds16 whole leaf 3dpi 0.70 >More info 0.61 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
16 edr1 18 h powdery mildew -0.84 >More info -0.46 >More info Col-0 18 h powdery mildew Original data GEO bulk
17 NahG 0.70 >More info 0.60 >More info Col-0 Leaves Original data GEO bulk
18 Mutant siz1-3 -0.80 >More info -0.49 >More info Col-0 Original data GEO bulk
19 siz1-3 control -0.80 >More info -0.49 >More info Col-0 control Original data GEO bulk
20 camta2/3 warm -0.78 >More info -0.50 >More info WT warm entire aerial part Original data GEO bulk
21 cpr5scv1 -0.75 >More info -0.53 >More info WT(COL) Original data GEO bulk
22 camta1/3 warm -0.76 >More info -0.51 >More info WT warm entire aerial part Original data GEO bulk
23 Mutant siz1-3 (Drought) -0.76 >More info -0.51 >More info Col-0 (Drought) Original data GEO bulk
24 ceh1 mutant -0.74 >More info -0.53 >More info Parent line Original data
25 Cor 24h -0.62 >More info -0.65 >More info Mock 24h Cor Original data GEO bulk
26 siz1-3 drought -0.76 >More info -0.51 >More info Col-0 drought Original data GEO bulk
27 Octopus overexpressor 35SDYG25 -0.73 >More info -0.54 >More info WS Original data GEO bulk
28 sid2-1 cold 0.66 >More info 0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
29 dense canopy -0.74 >More info -0.51 >More info single (control) petiole Original data GEO bulk
30 cpr5 -0.68 >More info -0.56 >More info WT(COL) Original data GEO bulk
31 BLM+INA -0.73 >More info -0.51 >More info CK BLM and INA seedling Original data
32 eds16 whole leaf 0h UI 0.56 >More info 0.66 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
33 35:SUB1A -0.75 >More info -0.47 >More info WT whole seedling Original data GEO bulk
34 Mutant ga1-5 0.79 >More info 0.43 >More info Ler-1 Original data Comparison of plant hormone related mutant
35 rsa3-1 Na 24h -0.67 >More info -0.54 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
36 35S:RPS4 eds1-2 2h 0.71 >More info 0.50 >More info 35S:RPS4 2h leaves Original data
37 eds16 whole leaf 5dpi 0.65 >More info 0.55 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
38 low R/FR mock spray 0.70 >More info 0.50 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
39 smg7b-1 -0.74 >More info -0.46 >More info WT whole plant Original data GEO bulk
40 A. thaliana-A. lyrata hybrid 0.69 >More info 0.51 >More info A. thaliana mature leaves before flowering Original data GEO bulk
41 bio4-1 mutant watered00µM biotin leaves 0.76 >More info 0.44 >More info bio4-1 mutant leaves leaves Original data GEO bulk
42 sav3-2 light -0.50 >More info -0.70 >More info Col-0 light seedlings Original data GEO bulk
43 cpr5 -0.74 >More info -0.46 >More info WT seedling Original data GEO bulk
44 Mutant sav3-2 (WL) -0.50 >More info -0.70 >More info Col-0 (WL) Original data GEO bulk
45 Mutant sav3-2 (SH) -0.49 >More info -0.71 >More info Col-0 (SH) Original data GEO bulk
46 sav3-2 shade -0.49 >More info -0.71 >More info Col-0 shade seedlings Original data GEO bulk
47 WT-SA -0.67 >More info -0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
48 Col ozone 3h -0.66 >More info -0.52 >More info Col clean-air 3h ozone Original data GEO bulk
49 eds16 whole leaf 1dpi 0.59 >More info 0.58 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
50 plant (tga2-5-6) 4h control -0.65 >More info -0.51 >More info plant (Col-0) 4h control Original data GEO bulk
51 CLO 4mM -0.56 >More info -0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
52 Mutant tga2_5_6 -0.65 >More info -0.51 >More info Col-0 Original data GEO bulk
53 WT powdery mildew -0.69 >More info -0.47 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
54 eds16 whole leaf 7dpi 0.67 >More info 0.48 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
55 Constans-mutant -0.60 >More info -0.54 >More info Col control above-ground whole plant Original data GEO bulk
56 camta1/2/3 warm -0.72 >More info -0.42 >More info WT warm entire aerial part Original data GEO bulk
57 cpr5npr1 -0.80 >More info -0.32 >More info WT(COL) Original data GEO bulk
58 Col whole leaf 5dpi -0.72 >More info -0.40 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
59 phyB mutant 16C 10hrs 0.77 >More info 0.34 >More info 16C 10h whole plant excluding roots Original data GEO bulk
60 vtc2 (I) -0.73 >More info -0.38 >More info Col (I) rosette Original data GEO bulk
61 edr1 36 h powdery mildew -0.75 >More info -0.36 >More info Col-0 36 h powdery mildew Original data GEO bulk
62 Prohexadione 12 h -0.71 >More info -0.40 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
63 downy mildew cotyledons late stage -0.58 >More info -0.52 >More info mock inoculated Cotyledons Original data GEO bulk
64 npr1 sni1 brca2a SA 0.74 >More info 0.36 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
65 pmr4-1 control -0.66 >More info -0.44 >More info WT control uninoculated Original data GEO bulk
66 sid2-PsmES4326-24hpi 0.69 >More info 0.41 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
67 npr1-PsmES4326-24hpi 0.64 >More info 0.45 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
68 cs26 long day -0.67 >More info -0.42 >More info Leaves-WT-LD leaf Original data GEO bulk
69 OE WRKY63.3 high light -0.66 >More info -0.43 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
70 Col whole leaf 7dpi -0.74 >More info -0.35 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
71 smg5-2 -0.67 >More info -0.41 >More info WT whole plant Original data GEO bulk
72 E.orontii Infection 3 day -0.61 >More info -0.47 >More info Uninfection 3 day Original data Elicitor treatments
73 ARR22-ox 0.60 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
74 HARAP hypoxic -0.59 >More info -0.49 >More info hypoxic hypoxia Original data GEO bulk
75 eds16 whole leaf 6hpi 0.56 >More info 0.51 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
76 npr1 sni1 SA -0.74 >More info -0.33 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
77 S58-2 -0.71 >More info -0.36 >More info wt Original data GEO bulk
78 camta1/2/3 24h cold -0.63 >More info -0.43 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
79 S15-118 -0.75 >More info -0.31 >More info wt Original data GEO bulk
80 csn5 (csn5a-2 csn5b) light -0.62 >More info -0.44 >More info WT light Original data GEO bulk
81 sid2-2 safener 0.67 >More info 0.38 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
82 toc1-1-49hr -0.66 >More info -0.39 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
83 WT +elf18 10h -0.73 >More info -0.32 >More info WT untreated elf18 Original data GEO bulk
84 CMP 4hr -0.63 >More info -0.42 >More info Acetone 4hr root Original data GEO bulk
85 35S:RPS4 eds1-2 24h 0.73 >More info 0.32 >More info 35S:RPS4 24h leaves Original data
86 bio4-1 mutant leaves -0.83 >More info -0.22 >More info WT leaves leaves Original data GEO bulk
87 FOX line K19624 -0.74 >More info -0.31 >More info empty vector control (T3) FOX lines Original data GEO bulk
88 myb3 myb3r4d -0.63 >More info -0.42 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
89 Light 3day ivd -0.47 >More info -0.58 >More info 0h ivd Original data
90 WT 3h -P -0.48 >More info -0.57 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
91 A6 mutant -0.70 >More info -0.34 >More info WT rosette leaves Rosette leaves Original data GEO bulk
92 CMV-WT -0.65 >More info -0.39 >More info Mock-At Aerial tissues Original data GEO bulk
93 Mutant cry1 (High Light) 0.62 >More info 0.42 >More info Col-0 (High Light) Original data GEO bulk
94 20d after anthesis -0.69 >More info -0.35 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
95 sav1-1 light -0.55 >More info -0.49 >More info Col-0 light seedlings Original data GEO bulk
96 oas-a1.1 Cd 18h -0.54 >More info -0.50 >More info Cd 18h root Root Original data GEO bulk
97 UV -0.73 >More info -0.31 >More info WT aerial region Original data GEO bulk
98 cry1 high light 0.62 >More info 0.42 >More info Col-O high light Original data GEO bulk
99 sni1 -0.48 >More info -0.56 >More info WT Original data GEO bulk
100 SA -0.67 >More info -0.35 >More info WT mock Whole seedling Original data GEO bulk
101 RL/LD atbzip16 -0.55 >More info -0.47 >More info RL/LD Ler grown under dark or red-light and long-day (0.5 μmole m-2 sec-1) aerial part of seedlings Original data GEO bulk
102 WT chitooctaose -0.63 >More info -0.39 >More info WT water Original data GEO bulk
103 upf3 -0.64 >More info -0.38 >More info WT whole plant Original data GEO bulk
104 46T-CK -0.37 >More info -0.65 >More info WT-CK none Original data
105 npr1-1 SA 0.64 >More info 0.37 >More info Col-0 SA complete seedling Original data
106 Mutant ufo-1(flower) -0.74 >More info -0.27 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
107 bak1-3 +Pep2 10h -0.51 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
108 Infected pft1 leaf -0.53 >More info -0.48 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
109 anti-sense for AtAOX1a -0.66 >More info -0.35 >More info WT Original data GEO bulk
110 Atwrky63 0.75 >More info 0.25 >More info Col0 none leaf Original data GEO bulk
111 upf1 -0.62 >More info -0.38 >More info WT whole plant Original data GEO bulk
112 csn3-1 light -0.57 >More info -0.43 >More info WT light Original data GEO bulk
113 abi4 vtc2 (I) -0.65 >More info -0.35 >More info Col (I) rosette Original data GEO bulk
114 wavy -0.63 >More info -0.36 >More info WT Original data GEO bulk
115 aba3-1 -0.73 >More info -0.26 >More info wt Original data GEO bulk
116 pollinated pop2-1 flowers 0.62 >More info 0.37 >More info pollinated WT flowers flowers Original data GEO bulk
117 npr1-3 DCA 48h -0.61 >More info -0.38 >More info npr1-3 MOCK 48h Original data GEO bulk
118 nas4x leaves + Fe -0.54 >More info -0.45 >More info WT leaves + Fe Leaves Original data GEO bulk
119 toc1-1-53hr -0.70 >More info -0.29 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
120 pepr1-1 Pepr2-3 +Pep2 10h 0.57 >More info 0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
121 DFPM -0.55 >More info -0.43 >More info control Original data GEO bulk
122 S82-2 0.54 >More info 0.44 >More info wt Original data GEO bulk
123 Dry midday 0.47 >More info 0.51 >More info Wet midday water-limited whole rosette Original data GEO bulk
124 sid2-2 24hpi A. brassicicola 0.72 >More info 0.25 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
125 abh1 -ABA -0.79 >More info -0.18 >More info Col-0 -ABA Original data GEO bulk
126 cpr5npr1svi1 -0.68 >More info -0.29 >More info WT(COL) Original data GEO bulk
127 ISOXABEN 0.63 >More info 0.34 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
128 glk1 glk2 GLK1-GR +DEX 24h 0.75 >More info 0.22 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
129 Col(gl) leaf 100mM NaCl -0.54 >More info -0.42 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
130 Laer pretreat JA Flg22 0h 0.59 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
131 efr-1 +elf18 10h 0.69 >More info 0.27 >More info WT +elf18 10h elf18 Original data GEO bulk
132 A. lyrata 0.53 >More info 0.43 >More info A. thaliana mature leaves before flowering Original data GEO bulk
133 CMP 24hr -0.64 >More info -0.32 >More info Acetone 24hr root Original data GEO bulk
134 Col(gl) 100mM NaCl -0.54 >More info -0.42 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
135 4h decapitation 0.66 >More info 0.30 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
136 pepr1-1 Pepr2-3 +Pep2 2h 0.45 >More info 0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
137 35S:CDO1 normoxia -0.35 >More info -0.61 >More info WT normoxia normoxia whole rosette Original data
138 psae1-3 stn7-1 -0.64 >More info -0.31 >More info WS rosette leaves Original data GEO bulk
139 seedlings-week-old RECA1-overexpressing
transgenic		 -0.59 >More info -0.36 >More info seedlings-week-old Col-0 seedlings Original data
140 toc1-1-57hr -0.66 >More info -0.29 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
141 bHLH122 ox 0.45 >More info 0.50 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
142 seed germinating in countinuous light 24h SL 0.27 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
143 GO5; 0h switch to ambient CO2 concentrations; 0.65 >More info 0.29 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
144 Mutant clv3-7(flower) 0.63 >More info 0.31 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
145 WT cold -0.61 >More info -0.33 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
146 WT-NOCO2 INFECTED -0.60 >More info -0.34 >More info WT-MOCK Original data GEO bulk
147 WT leaves - Fe -0.69 >More info -0.25 >More info WT leaves + Fe Leaves Original data GEO bulk
148 WT +Pep2 10h -0.63 >More info -0.31 >More info WT untreated Pep2 Original data GEO bulk
149 gh3.5D uninoculated 0.58 >More info 0.36 >More info Col-0 48 hpi Original data GEO bulk
150 sid2-2 mock 0.53 >More info 0.40 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
151 tt4 0.54 >More info 0.39 >More info WT aerial region Original data GEO bulk
152 pnp1-1 1wk -P -0.52 >More info -0.41 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
153 pmr5 pmr6 -0.52 >More info -0.41 >More info Col-0 Original data GEO bulk
154 OE WRKY63.3 -0.63 >More info -0.30 >More info OE WRKY40.4 none leaf Original data GEO bulk
155 mkk1/mkk2 control rep -0.66 >More info -0.26 >More info Col-0 Time 0 rep Original data GEO bulk
156 -Sulfate 24 h -0.40 >More info -0.52 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
157 pad2-PsmES4326-24hpi 0.57 >More info 0.35 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
158 seedlings protease IV -0.63 >More info -0.29 >More info seedlings nontreated control whole seedling Original data
159 Leaf systemic -0.61 >More info -0.31 >More info Leaf control vegetative leaf Original data GEO bulk
160 OE WRKY40.4 0.50 >More info 0.42 >More info OE WRKY40.4 none leaf Original data GEO bulk
161 DC3000 24h -0.60 >More info -0.32 >More info Mock 24h DC3000 Original data GEO bulk
162 BI-1-30min IAA 0.66 >More info 0.25 >More info BI-1-0h IAA whole plant Original data GEO bulk
163 Cor hrpS 10h -0.56 >More info -0.35 >More info Mock 10h Cor hrpS Original data GEO bulk
164 WUSp cells -0.54 >More info -0.37 >More info Protoplast Induced Original data GEO bulk
165 35S:RPS4 eds1-2 8h 0.55 >More info 0.36 >More info 35S:RPS4 8h leaves Original data
166 ape2 high light -0.59 >More info -0.32 >More info Ws-2 high light Original data GEO bulk
167 npr1 sni1 ssn2 0.66 >More info 0.24 >More info npr1 sni1 water water seedling Original data GEO bulk
168 CHS-silenced type 0.65 >More info 0.25 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
169 OH1 -0.55 >More info -0.35 >More info Col-0 leaves Original data GEO bulk
170 coi1-16 ein2 sid2 ozone -0.63 >More info -0.27 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
171 SA 24h -0.23 >More info -0.67 >More info EtOH 24h 24hr Original data GEO bulk
172 abi4-102 (I) -0.59 >More info -0.31 >More info Col (I) rosette Original data GEO bulk
173 Col whole leaf 1dpi 0.57 >More info 0.33 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
174 WT (Col-0) inflorescence moderate drought day 10 0.55 >More info 0.34 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
175 chito-tetramer -0.55 >More info -0.34 >More info Col Mock Original data GEO bulk
176 toc1-1-65hr -0.67 >More info -0.22 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
177 del1-1 5dpi -0.65 >More info -0.24 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
178 low CO2 + light -0.53 >More info -0.36 >More info normal CO2 + light Original data GEO bulk
179 Cs root -0.63 >More info -0.26 >More info control root Original data GEO bulk
180 csn4-1 dark -0.53 >More info -0.36 >More info WT light Original data GEO bulk
181 M6PR transgenic 0mM NaCl -0.60 >More info -0.29 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
182 control leaf (cmt 1d) -0.68 >More info -0.20 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
183 Polysomal RNA 35S:HF-RPL18 cold -0.76 >More info -0.12 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
184 atmospheric CO2 low Mg shoot -0.60 >More info -0.28 >More info atmospheric CO2 normal Mg shoot Shoot Original data
185 MYB29 OE 0.58 >More info 0.30 >More info WT for MYB29/76 Original data GEO bulk
186 LTN008-2 aza-dc -0.56 >More info -0.31 >More info LTN012-2 Mock Original data
187 phyB Dark -0.54 >More info -0.33 >More info WT(Ler) Dark Original data GEO bulk
188 Inflorescence miR-NGA 0.51 >More info 0.36 >More info Inflorescence wt Original data GEO bulk
189 pho1 -0.79 >More info -0.08 >More info Col2WT Original data GEO bulk
190 S14-150 -0.65 >More info -0.22 >More info wt Original data GEO bulk
191 SOS1 100mM NaCl -0.62 >More info -0.25 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
192 MYB12OX -0.62 >More info -0.25 >More info Col-0 aerial part Original data
193 coi1-16 ein2 sid2 ctrl 0.62 >More info 0.25 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
194 prmt5-5 0.66 >More info 0.21 >More info WT Col continuous light Aerial tissue Original data GEO bulk
195 ara1/2mut 0.52 >More info 0.34 >More info Col-3 Original data GEO bulk
196 Cycloheximide 3 h -0.53 >More info -0.33 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
197 Ambient CO2 LIMITING N DAY -0.67 >More info -0.19 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
198 cat2-long-day 2d 0.69 >More info 0.17 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
199 oxt6 mutant 0.51 >More info 0.35 >More info WT Original data GEO bulk
200 MYB76 OE 0.59 >More info 0.27 >More info WT for MYB29/76 Original data GEO bulk
201 PAHs stress -0.62 >More info -0.24 >More info exp control phenanthrene whole plants Original data GEO bulk
202 Cd 24h root 0.68 >More info 0.17 >More info WT-Untreated Shoot Original data GEO bulk
203 Chitin -0.58 >More info -0.27 >More info Col C Original data GEO bulk
204 vte1-1 3d vernalization 0.50 >More info 0.35 >More info WT 3d vernalization Original data GEO bulk
205 KO-nudx19 leaves -0.50 >More info -0.35 >More info WT leaves rosette leaves Original data
206 Te ozone -0.55 >More info -0.29 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
207 IMI 4mM -0.51 >More info -0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
208 Red/FR Light45min 0.24 >More info 0.60 >More info FarRed Light 45min Original data Light treatments
209 rgs1+sucrose -0.55 >More info -0.28 >More info WT+sucrose rosette leaves Original data GEO bulk
210 tt4 -0.52 >More info -0.31 >More info Col-0 aerial part Original data
211 Salicylic Acid 3 h -0.32 >More info -0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
212 edr1 0 h powdery mildew -0.60 >More info -0.23 >More info Col-0 0 h powdery mildew Original data GEO bulk
213 msh1 albino -0.60 >More info -0.23 >More info WT aerial part Original data GEO bulk
214 SA 3h -0.25 >More info -0.58 >More info EtOH 3h 3hr Original data GEO bulk
215 wrky33 Bc inoculation 14h -0.55 >More info -0.27 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
216 anac017-2 water 3h 0.55 >More info 0.27 >More info WT water 3h 3h_water Original data GEO bulk
217 Light 3day wt 0.51 >More info 0.31 >More info 0h wt Original data
218 Col laser microdissected 5 dpi -0.54 >More info -0.28 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
219 35S:ATR1 like miR 0.60 >More info 0.22 >More info WT for miR Original data GEO bulk
220 AtLysM RLK1 mutant water -0.57 >More info -0.25 >More info WT water Original data GEO bulk
221 atgsnor1-1 0.73 >More info 0.09 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
222 SCR-GR Time 1H Dex -0.23 >More info -0.59 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
223 oligomycin 4 h -0.52 >More info -0.29 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
224 0h hml -0.65 >More info -0.16 >More info 0h wt Original data
225 pad4-PsmES4326-24hpi 0.51 >More info 0.30 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
226 scrm-D -0.56 >More info -0.25 >More info Col-0 WT whole seedling Original data GEO bulk
227 cdpk6-yfp -0.64 >More info -0.17 >More info Kan seedlings Original data GEO bulk
228 CAX1/CAX3 mutant -0.53 >More info -0.28 >More info Col whole plant Original data GEO bulk
229 vtc1 (II) -0.56 >More info -0.25 >More info Col (II) rosette Original data GEO bulk
230 Elevated CO2 expanding leaf -0.55 >More info -0.26 >More info Ambient CO2 expanding leaf expanding leaf Original data
231 green tissue gl3 egl3 0.52 >More info 0.29 >More info green tissue WT L. er Original data GEO bulk
232 ice1 control -0.53 >More info -0.27 >More info WT control Original data GEO bulk
233 albino Ds13-2198-1 0.53 >More info 0.27 >More info control Original data GEO bulk
234 DVL4 induced 0.54 >More info 0.26 >More info emptyvectordex Original data GEO bulk
235 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.55 >More info 0.25 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
236 pad4-est1b-1-doublemutant -0.63 >More info -0.17 >More info pad4-mutant developed rosette leaves Original data GEO bulk
237 D2O -0.55 >More info -0.25 >More info H2O seedling Original data GEO bulk
238 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.73 >More info 0.07 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
239 ataf1-1 mutant Col-0 Un-inoculated 0.70 >More info 0.10 >More info WT Col-0 Un-inoculated Original data GEO bulk
240 overexpresser LBD38 in -N 0.54 >More info 0.25 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
241 col 24h4c set4 0.54 >More info 0.25 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
242 PRR5-VP 18h light on 0.61 >More info 0.18 >More info WT 18h light on whole plant Original data GEO bulk
243 scrm-D:mute -0.57 >More info -0.22 >More info Col-0 WT whole seedling Original data GEO bulk
244 ataf1-1 mutant Col-0 Bgh inoculated -0.58 >More info -0.21 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
245 AgNO3 3 h -0.59 >More info -0.19 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
246 Cs shoot 0.13 >More info 0.65 >More info control shoot Original data GEO bulk
247 hst5 -0.52 >More info -0.25 >More info Col-0 Original data GEO bulk
248 msg2-BR 0.58 >More info 0.19 >More info BR BR dark-grown seedlings Original data GEO bulk
249 3x(m) -0.54 >More info -0.23 >More info 2x two week old seedlings Original data
250 cat2-short-day 4d 0.53 >More info 0.24 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
251 gir flower 33d -0.63 >More info -0.14 >More info Col-7 flower 33d flower Original data GEO bulk
252 myb50 cork 0.52 >More info 0.25 >More info wt cork cork Original data GEO bulk
253 Elevated CO2 fully expanded leaf -0.57 >More info -0.19 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
254 calcicole ecotype Cal-0 -0.65 >More info -0.11 >More info Col-4 1 mM CaCl2 Original data GEO bulk
255 eds16 laser microdissected 5 dpi 0.50 >More info 0.26 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
256 HSP90 Reduced RNAi-B1 -0.68 >More info -0.08 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
257 sfr2 cold -0.56 >More info -0.20 >More info WT cold All aerial tissue Original data GEO bulk
258 Elevated CO2 AMPLE N NIGHT -0.60 >More info -0.15 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
259 9 hr Hypoxia IP RNA -0.52 >More info -0.23 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
260 WT (Col) glucose 0.51 >More info 0.24 >More info WT (Col) glucose seedlings Original data GEO bulk
261 gh3.5-1D 48 hpi -0.50 >More info -0.25 >More info Col-0 uninoculated Original data GEO bulk
262 Total RNA 35S:HF-RPL18 cold -0.78 >More info 0.03 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
263 atr mock -0.57 >More info -0.18 >More info WT mock shoot apical meristem Original data
264 irradiated leaf (WT 1d) -0.55 >More info -0.19 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
265 FOX line K16331 -0.58 >More info -0.16 >More info empty vector control (T3) FOX lines Original data GEO bulk
266 Time-0 chr11-1chr17-1 0.54 >More info 0.20 >More info Time-0 Col-0 leaf explants Original data
267 GA -0.62 >More info -0.12 >More info none GA Rosette Original data GEO bulk
268 +1.6 mM Tween 20 1 h. -0.51 >More info -0.23 >More info +distilled water 1 h. Original data GEO bulk
269 C24 UV1 0.71 >More info 0.03 >More info C24 mock UV seedling Original data
270 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
271 wrky72-2-NOCO2 INFECTED -0.51 >More info -0.22 >More info WT-NOCO2 INFECTED Original data GEO bulk
272 Col-0 48 hpi -0.59 >More info -0.14 >More info Col-0 uninoculated Original data GEO bulk
273 vtc2-1 0.52 >More info 0.21 >More info Col-0 whole plant Original data GEO bulk
274 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.54 >More info -0.19 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
275 WT (Col-0) inflorescence well-watered day 4 0.50 >More info 0.23 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
276 Homozygous-AtcesA4 0.59 >More info 0.14 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
277 toc1-1-81hr -0.73 >More info -0.00 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
278 Bur-0-1h IAA -0.64 >More info -0.09 >More info Bur-0h IAA whole plant Original data GEO bulk
279 toc1-1-89hr -0.56 >More info -0.16 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
280 CT101 ozone -0.52 >More info -0.20 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
281 express RfBP 0.53 >More info 0.19 >More info WT green part of the whole plant Original data GEO bulk
282 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.52 >More info -0.20 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
283 Mutant ag-12(flower) -0.65 >More info -0.07 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
284 4C 2h(SOIL) -0.61 >More info -0.11 >More info 4C 0h(SOIL) Original data GEO bulk
285 Mutant cry1 0.53 >More info 0.19 >More info Col-0 Original data GEO bulk
286 Col-0 ozone -0.52 >More info -0.20 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
287 Wt-BA-sample 0.57 >More info 0.15 >More info Wt-dmso-sample seedling Original data
288 cry1 low light 0.53 >More info 0.19 >More info Col-O low light Original data GEO bulk
289 bri1-116 -0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
290 E.orontii Infection 6 h -0.16 >More info -0.55 >More info Uninfection 6 h Original data Elicitor treatments
291 RPL18 TuMV inoculated polysomal RNA -0.51 >More info -0.20 >More info mock inoculated polysomal RNA PO Original data GEO bulk
292 Dry midnight 0.53 >More info 0.18 >More info Wet midnight water-limited whole rosette Original data GEO bulk
293 WT in -N -0.53 >More info -0.18 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
294 fis1X2x fis1 mutant cross -0.62 >More info -0.09 >More info 2xX2x cross Original data GEO bulk
295 Chitosan 3h Treatment -0.53 >More info -0.18 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
296 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
297 ms1 unpollinated 0.58 >More info 0.12 >More info WT 8h-pollinated pistil Original data GEO bulk
298 C24 ozone -0.50 >More info -0.20 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
299 spx1 spx2 complete -0.65 >More info -0.04 >More info WT complete seedlings Original data
300 vtc1-1 -0.68 >More info -0.01 >More info Col-0 whole plant Original data GEO bulk
301 miR 0h -0.54 >More info -0.15 >More info Col 0h Leaf Original data GEO bulk
302 til1-1 22C -0.50 >More info -0.19 >More info Col-0 22C Original data GEO bulk
303 agb1 -ABA LF -0.19 >More info -0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
304 Homozygous-AtcesA6 0.56 >More info 0.12 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
305 npr1 sni1 ssn2 SA 0.50 >More info 0.18 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
306 edr1 96 h powdery mildew 0.57 >More info 0.10 >More info Col-0 96 h powdery mildew Original data GEO bulk
307 epiF3 0.53 >More info 0.13 >More info WT Col-0 aerial part Original data
308 Col-0 shade 0.13 >More info 0.53 >More info Col-0 light seedlings Original data GEO bulk
309 ddm1 F6 inflorescence -0.59 >More info -0.07 >More info wt Col inflorescence unopened flower buds Original data
310 protoplasts T0 [flg22] 0.50 >More info 0.15 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
311 Atss3 Light1 0.55 >More info 0.10 >More info Atss3 Dark0.5 Original data GEO bulk
312 16h Col-0 -0.53 >More info -0.12 >More info 00h Col-0 Original data GEO bulk
313 dcl1-7 -0.58 >More info -0.07 >More info Ler Original data GEO bulk
314 OE-HRA1 2HS  -0.50 >More info -0.14 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
315 camta1/2 warm -0.50 >More info -0.14 >More info WT 24h cold entire aerial part Original data GEO bulk
316 se-1 p35S::MIR156 0.62 >More info 0.02 >More info Col-0 vegetative apex Original data GEO bulk
317 pmr4-1 powdery mildew -0.55 >More info -0.09 >More info WT powdery mildew uninoculated Original data GEO bulk
318 MYB51 OE 0.51 >More info 0.12 >More info WT for ATR1/MYB51 Original data GEO bulk
319 pistil 8.0HAP -0.52 >More info -0.11 >More info unpollinated pistil pistil Original data GEO bulk
320 aln-1 0.63 >More info -0.01 >More info Col-0 Aerial part of seedlings Original data
321 HSP90 Reduced RNAi-A2 -0.55 >More info -0.06 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
322 penta Pst DC3000 12hpi -0.53 >More info -0.08 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
323 WT roots - Fe -0.53 >More info -0.08 >More info WT roots + Fe Roots Original data GEO bulk
324 GO5; harvested 8h continiously maintained in high
CO2;		 0.52 >More info 0.09 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
325 WT (Col-0) inflorescence well-watered day 3 0.54 >More info 0.06 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
326 T1080 UV -0.56 >More info -0.04 >More info T1080 mock UV seedling Original data
327 Bur-0-3h IAA -0.55 >More info -0.05 >More info Bur-0h IAA whole plant Original data GEO bulk
328 BI-1-1h IAA 0.51 >More info 0.09 >More info BI-1-0h IAA whole plant Original data GEO bulk
329 Atss3 Light4 0.51 >More info 0.09 >More info Atss3 Dark0.5 Original data GEO bulk
330 HSP90 Reduced Salk hsp90.1 0.52 >More info 0.08 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
331 abh1 +ABA -0.65 >More info 0.05 >More info Col-0 +ABA Original data GEO bulk
332 C24-3h IAA -0.53 >More info -0.06 >More info C24-0h IAA whole plant Original data GEO bulk
333 6h volatiles Sp. HRO-C48 -0.07 >More info -0.52 >More info 6h untreated whole seedling Original data GEO bulk
334 SOS1 0mM NaCl -0.50 >More info -0.09 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
335 toc1-1-85hr -0.63 >More info 0.04 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
336 ANAC102 over-expressor 0.53 >More info 0.05 >More info C24 Original data GEO bulk
337 HSP90 Reduced Salk hsp90.2 0.57 >More info 0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
338 Mt SA -0.53 >More info -0.04 >More info Col-0 SA Original data GEO bulk
339 Mutant ap3-6(flower) -0.68 >More info 0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
340 low R/FR SA -0.54 >More info 0.00 >More info low R/FR low R/FR SA spray Original data GEO bulk
341 HSP90 Reduced RNAi-A1 -0.57 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
342 total mRNA eif3k -0.58 >More info 0.05 >More info total mRNA WT aerial part Original data GEO bulk
343 erf5 erf6 0.54 >More info -0.02 >More info WT+water water seedlings Original data GEO bulk
344 ATR1 OE 0.56 >More info -0.04 >More info WT for ATR1/MYB51 Original data GEO bulk
345 Dex-rga(delta17) 2h GA4 0.56 >More info -0.04 >More info Vector 4h GA4 shoots Original data GEO bulk
346 Laer pretreat GA Flg22 1h -0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
347 Mutant ap2-6(shoot apex) -0.50 >More info 0.00 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
348 spx1 spx2 no Pi -0.53 >More info 0.04 >More info WT no Pi seedlings Original data
349 vte2 leaves 120h LT -0.53 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
350 WT 6H Cold -0.54 >More info 0.06 >More info WT control Original data GEO bulk
351 tga2 tga5 tga6 ctrl 0.53 >More info -0.07 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
352 SA Treated -0.54 >More info 0.08 >More info Water Original data GEO bulk
353 cpr5 sim smr1 -0.51 >More info 0.05 >More info WT seedling Original data GEO bulk
354 WT 1mM phosphate 8 hours. 0.56 >More info -0.11 >More info WT control (not supplemented). Original data
355 Mutant lfy-12(flower) -0.62 >More info 0.17 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
356 IAA7mII over-expressor IAA Treated -0.24 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
357 Bay-0-3h IAA -0.50 >More info 0.06 >More info Bay-0-0h IAA whole plant Original data GEO bulk
358 Sha-1h IAA -0.55 >More info 0.13 >More info Sha-0h IAA whole plant Original data GEO bulk
359 cat2-2; 0h switch to ambient CO2 concentrations; 0.62 >More info -0.21 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
360 bZIP1ko mutant N-Light- 0.50 >More info -0.09 >More info WT-sib N-Light- whole plant Original data GEO bulk
361 35S::KLU -0.53 >More info 0.12 >More info WT Shoot Original data
362 rdr6-15 -0.62 >More info 0.23 >More info Col-0 plant inflorescence Original data
363 siliques AtHb1 control -0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
364 whole roots -Fe 3 hour -0.54 >More info 0.25 >More info whole roots standard Original data GEO bulk
365 Fe starvation 3 h -0.54 >More info 0.25 >More info Control Original data GEO bulk
366 glk1 glk2 GLK1-GR +DEX 4h -0.64 >More info 0.36 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
367 Col0-PsmES4326-24hpi -0.35 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
368 CCA1-ox 6am non-polysomal -0.26 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
369 Leafminer damaged seedlings -0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
370 WT +Pep2 2h -0.53 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
371 Col BTH -0.74 >More info 0.67 >More info Col rosettes Original data GEO bulk