4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells epidermis 140mM NaCl 48 hours
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List of experiments correlated with "root cells epidermis 140mM NaCl 48 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells epidermis 140mM NaCl 48 hours		 Correlation to
root cells epidermis 140mM NaCl 48 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells epidermis 140mM NaCl 48 hours 1.00 >More info 1.00 >More info root cells epidermis standard 1 hour root cells epidermis Original data
2 root cells epidermis 140mM NaCl 32 hours 0.92 >More info 0.93 >More info root cells epidermis standard 1 hour root cells epidermis Original data
3 root cells epidermis 140mM NaCl 20 hours 0.90 >More info 0.92 >More info root cells epidermis standard 1 hour root cells epidermis Original data
4 root cells epidermis 140mM NaCl 8 hours 0.88 >More info 0.88 >More info root cells epidermis standard 1 hour root cells epidermis Original data
5 root cells epidermis 140mM NaCl 3 hours 0.86 >More info 0.89 >More info root cells epidermis standard 1 hour root cells epidermis Original data
6 root cells stele 140mM NaCl 48 hours 0.85 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
7 root cells cortex 140mM NaCl 32 hours 0.84 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
8 root cells endodermis 140mM NaCl 32 hours 0.85 >More info 0.80 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root cells endodermis 140mM NaCl 48 hours 0.85 >More info 0.80 >More info root cells endodermis standard 1 hour root cells endodermis Original data
10 root cells cortex 140mM NaCl 48 hours 0.86 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells epidermis 140mM NaCl 1 hour 0.79 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
12 root cells stele 140mM NaCl 32 hours 0.83 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
13 root cells endodermis 140mM NaCl 20 hours 0.83 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
14 root cells cortex 140mM NaCl 20 hours 0.84 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
15 root cells stele 140mM NaCl 20 hours 0.81 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
16 root cells stele 140mM NaCl 1 hour 0.79 >More info 0.77 >More info root cells stele standard 1 hour root cells stele Original data
17 root cells stele 140mM NaCl 8 hours 0.81 >More info 0.74 >More info root cells stele standard 1 hour root cells stele Original data
18 root cells endodermis 140mM NaCl 3 hours 0.81 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root cells stele 140mM NaCl 3 hours 0.79 >More info 0.76 >More info root cells stele standard 1 hour root cells stele Original data
20 root cells cortex 140mM NaCl 8 hours 0.83 >More info 0.72 >More info root cells cortex standard 1 hour root cells cortex Original data
21 root cells endodermis 140mM NaCl 8 hours 0.83 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
22 root cells cortex 140mM NaCl 1 hour 0.77 >More info 0.74 >More info root cells cortex standard 1 hour root cells cortex Original data
23 root cells cortex 140mM NaCl 3 hours 0.81 >More info 0.65 >More info root cells cortex standard 1 hour root cells cortex Original data
24 root cells endodermis 140mM NaCl 1 hour 0.74 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
25 line J1551-5 days control + 2 days salt s 0.67 >More info 0.75 >More info line J1551-7 days-control Original data
26 upb1-1 elongation zone -0.62 >More info -0.72 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
27 root epidermis and lateral root cap pH4.6 0.66 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
28 root stele pH4.6 0.64 >More info 0.68 >More info root stele pH5.7 Original data GEO bulk
29 bbx24 in Simulated Shade -0.60 >More info -0.71 >More info WT in simulated shade shade seedling Original data
30 OXUPB1-2 meristematic zone 0.64 >More info 0.65 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
31 rhd2 0.62 >More info 0.65 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
32 root epidermis and lateral root cap -S 0.57 >More info 0.70 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
33 Col-0 low oxygen 0.68 >More info 0.57 >More info Col-0 control low oxygen root Original data GEO bulk
34 root Dosed gold 0.64 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
35 0.125 mM gold 24 h 0.64 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
36 AgNO3 3 h 0.45 >More info 0.73 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
37 whole roots -Fe 6 hour 0.43 >More info 0.74 >More info whole roots standard Original data GEO bulk
38 epidermis auxin 0.57 >More info 0.58 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
39 Chemically 0.42 >More info 0.73 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
40 root longitudinal zone-4 NaCl 0.60 >More info 0.54 >More info root longitudinal zone-4 Original data GEO bulk
41 inhibitor B Treated 0.57 >More info 0.57 >More info Negative Control Original data GEO bulk
42 line J2731-5 days control + 2 days salt s 0.50 >More info 0.59 >More info line J2731-7 days-control Original data
43 24h +Pi -0.60 >More info -0.49 >More info 24h -Pi root Original data GEO bulk
44 root hypoxia total 0.52 >More info 0.56 >More info root control total Original data GEO bulk
45 35S::RSL4 -0.45 >More info -0.62 >More info Col-0 Control root Original data GEO bulk
46 Col-0 2HS 0.53 >More info 0.53 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
47 columella auxin 0.51 >More info 0.55 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
48 Heat shock optimum 0.41 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
49 root cortex pH4.6 0.48 >More info 0.58 >More info root cortex pH5.7 Original data GEO bulk
50 2 hr Hypoxia Total RNA 0.56 >More info 0.49 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
51 SCL3 OE -0.58 >More info -0.47 >More info Col-0 whole root Original data GEO bulk
52 IAA/inhibitor B Treated 0.48 >More info 0.56 >More info IAA Treated Original data GEO bulk
53 2hr continuous KNO3 and MSX and Gln PeR cell 0.48 >More info 0.56 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
54 pericycle auxin 0.52 >More info 0.51 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
55 whole roots 140 mM NaCl 1 hour 0.51 >More info 0.52 >More info whole roots standard Original data GEO bulk
56 5-Triiodobenzoic acid3 h 0.40 >More info 0.63 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
57 TNT-seedlings 0.34 >More info 0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
58 WT Root Hypoxia 0.48 >More info 0.55 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
59 roots IAA 0.46 >More info 0.57 >More info roots mock Original data GEO bulk
60 SCR 72hr-S 0.46 >More info 0.57 >More info SCR 0hr endodermis Original data
61 roottip hypoxia total 0.39 >More info 0.63 >More info roottip control total Original data GEO bulk
62 seed germinating in countinuous light 24h SL 0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
63 red illumination +lincomycin 0.27 >More info 0.75 >More info red illumination -lincomycin Original data GEO bulk
64 Inflorescences Trp1 0.32 >More info 0.70 >More info Inflorescences ler inflorescences Original data GEO bulk
65 Shoot apex inflorescence (after bolting) 0.36 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
66 oas-a1.1 Cd 18h 0.38 >More info 0.63 >More info Cd 18h root Root Original data GEO bulk
67 bri1-116 0.28 >More info 0.73 >More info Col seedling Original data GEO bulk
68 NaCl Col 0.53 >More info 0.47 >More info Col Original data GEO bulk
69 Selenate (root) 0.49 >More info 0.50 >More info Ws (root) Original data GEO bulk
70 whole roots 140 mM NaCl 30 minutes 0.48 >More info 0.51 >More info whole roots standard Original data GEO bulk
71 Root Selenate 0.49 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
72 SCR 96hr-S 0.42 >More info 0.56 >More info SCR 0hr endodermis Original data
73 Root dark control 7h 0.50 >More info 0.47 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
74 1h +Pi -0.38 >More info -0.59 >More info 1h -Pi root Original data GEO bulk
75 SCR 48hr-S 0.47 >More info 0.50 >More info SCR 0hr endodermis Original data
76 M6PR transgenic leaf 100mM NaCl -0.53 >More info -0.43 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
77 root stele -S 0.39 >More info 0.57 >More info root stele pH5.7 Original data GEO bulk
78 Whole root - low pH 12H 0.44 >More info 0.52 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
79 protoplasted roots pH4.6 0.54 >More info 0.40 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
80 toc1-1-81hr 0.39 >More info 0.55 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
81 R. solani AG8 0.39 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
82 root longitudinal zone-3 pH 4.6 0.40 >More info 0.54 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
83 6h +Pi -0.39 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
84 toc1-1-73hr 0.36 >More info 0.57 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
85 toc1-1-53hr 0.30 >More info 0.63 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
86 phr1 Shoot-Pi 0.56 >More info 0.36 >More info WT Root-Pi shoots Original data GEO bulk
87 toc1-1-85hr 0.37 >More info 0.55 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
88 T101D 10mM NH4NO3 -0.56 >More info -0.35 >More info col 10mM NH4NO3 Root Original data
89 T101A 10mM NH4NO3 -0.51 >More info -0.39 >More info col 10mM NH4NO3 Root Original data
90 Col-0 wt Hypoxic 0.36 >More info 0.54 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
91 SHR-GR Time 1H Dex -0.35 >More info -0.54 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
92 CeO2 germinant -0.37 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
93 8hr-pH4.5 0.34 >More info 0.54 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
94 Root -Cs 0.51 >More info 0.37 >More info Control-root Original data GEO bulk
95 root control pSHR 0.51 >More info 0.37 >More info root control total control root Original data GEO bulk
96 plant (tga2-5-6) 4h phytoprostane A1 0.37 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
97 hira-root -0.51 >More info -0.36 >More info WT-root root Original data
98 Oxidative Stress 3 h (root) -0.36 >More info -0.51 >More info Stress mock 3 h (root) Original data Stress treatments
99 root - 04% oxygen - 2h 0.13 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
100 root cortex -S -0.55 >More info -0.31 >More info root cortex pH5.7 Original data GEO bulk
101 Col leaf 100mM NaCl 0.53 >More info 0.33 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
102 Col leaf 100mM NaCl 0.53 >More info 0.33 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
103 Col 100mM NaCl 0.53 >More info 0.33 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
104 Mutant axr3-1 (IAA) 0.28 >More info 0.58 >More info Col (IAA) Original data GEO bulk
105 plant (tga2-5-6) 4h OPDA 0.36 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
106 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
107 hira-protoplast 0.32 >More info 0.51 >More info WT-protoplast protoplast Original data
108 P.syringae vir 4 h (leaf) 0.31 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
109 RRE1 Chitin 0.50 >More info 0.31 >More info Chitin Original data GEO bulk
110 Mutant axr3-1 0.29 >More info 0.52 >More info Col Original data GEO bulk
111 OPDA 4 h 0.31 >More info 0.50 >More info Col-0 Original data GEO bulk
112 plant (Col-0) 4h OPDA 0.31 >More info 0.50 >More info plant (Col-0) 4h control Original data GEO bulk
113 WT Shoot Hypoxia 0.25 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
114 toc1-1-77hr 0.28 >More info 0.52 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
115 seedling 30 min S Exp -0.19 >More info -0.61 >More info seedling -S Exp seedling Original data
116 root - 01% oxygen - 2h 0.23 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
117 oas-a1.1 Cd 24h 0.22 >More info 0.58 >More info Cd 24h root Shoot Original data GEO bulk
118 Methyl Jasmonate 0.5 h 0.18 >More info 0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
119 cpctry 0.21 >More info 0.54 >More info Col Original data GEO bulk
120 Col BTH 0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
121 stele pSHR 0h BL 0.58 >More info 0.15 >More info WR 35S 0h BL brassinosteroid root Original data
122 tga1 tga4 2h KNO3 0.19 >More info 0.53 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
123 MYB46-GR DEX -0.20 >More info -0.50 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
124 Leafminer damaged seedlings 0.13 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
125 Methyl Jasmonate 1 h 0.09 >More info 0.60 >More info Mock 1 h Original data Basic hormone treatment of seedlings
126 root - 04% oxygen - 48h 0.17 >More info 0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
127 mutant-line409 -0.10 >More info -0.58 >More info WT-control whole plant Original data GEO bulk
128 Cs shoot -0.12 >More info -0.55 >More info control shoot Original data GEO bulk
129 root cap pGL2(QC pSCRBRI1) 0h BL 0.51 >More info 0.15 >More info WR 35S 0h BL brassinosteroid root Original data
130 root control p35S 0.52 >More info 0.14 >More info root control total control root Original data GEO bulk
131 myb61 xylem 0.16 >More info 0.50 >More info wt xylem xylem Original data GEO bulk
132 21h-DC3000 avrRpm1 0.09 >More info 0.55 >More info 21h-DC3000 leaves Original data GEO bulk
133 root - 08% oxygen - 30min -0.04 >More info 0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
134 tfl1-1-23ºC 0.12 >More info 0.51 >More info WT-23ºC Original data GEO bulk
135 phosphate-starved -0.12 >More info -0.51 >More info control shoot tissue Original data GEO bulk
136 Light 0.01 >More info 0.58 >More info Control Original data GEO bulk
137 JA 3h 0.09 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
138 Total RNA 35S:HF-RPL18 0.03 >More info 0.50 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
139 IAA7mII over-expressor IAA Treated -0.18 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
140 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
141 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
142 Col0-PsmES4326-24hpi -0.11 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk