4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Night Time Treatment
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List of experiments correlated with "Night Time Treatment"  Help Download transcriptome of top 30
Score Experiment Correlation from
Night Time Treatment		 Correlation to
Night Time Treatment		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Night Time Treatment 1.00 >More info 1.00 >More info Night Time Control 1hr white light pulse aerial rosette Original data
2 60m light 0.83 >More info 0.87 >More info before light whole seedlings Original data GEO bulk
3 30m light 0.80 >More info 0.89 >More info before light whole seedlings Original data GEO bulk
4 Day Time Treatment 0.82 >More info 0.83 >More info Day Time Control 1hr white light pulse aerial rosette Original data
5 M6PR transgenic leaf 0mM NaCl -0.78 >More info -0.79 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
6 Shoot dark control 7h -0.77 >More info -0.75 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
7 Shoot submergence 24h -0.78 >More info -0.74 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
8 seedling 24h after Gamma WT 0.73 >More info 0.79 >More info seedling day 2 unirradiated WT 24h Original data
9 Col-0 WT HL 3h 0.76 >More info 0.74 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
10 Col(gl) 0mM NaCl -0.75 >More info -0.74 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
11 essp4/sdg8-5 mutant 0.82 >More info 0.67 >More info wild type leaf Original data GEO bulk
12 Col(gl) leaf 0mM NaCl -0.75 >More info -0.74 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
13 WT cold 0.72 >More info 0.77 >More info WT control All aerial tissue Original data GEO bulk
14 Shoot dark control 24h -0.75 >More info -0.73 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
15 sdg8-2 mutant 0.82 >More info 0.66 >More info wild type leaf Original data GEO bulk
16 Col-0 DEX Shade -0.78 >More info -0.69 >More info Col-0 DEX WL seedlings Original data
17 24h volatiles Sm. R3089 -0.69 >More info -0.78 >More info 24h untreated whole seedling Original data GEO bulk
18 shl-2 Pool -0.70 >More info -0.76 >More info Ler Pool seedling Original data GEO bulk
19 seedling 24h after Gamma atm-1 0.71 >More info 0.75 >More info seedling day 2 unirradiated atm-1 24h Original data
20 petiole in FRD -0.73 >More info -0.71 >More info petiole in WL petioles Original data GEO bulk
21 petiole in D -0.72 >More info -0.70 >More info petiole in WL petioles Original data GEO bulk
22 sfr2 control 0.73 >More info 0.68 >More info WT control All aerial tissue Original data GEO bulk
23 2d dark-grown WT(Col-0)/1 hr red light 0.71 >More info 0.69 >More info 2d dark-grown WT seedling Original data GEO bulk
24 Pseudomonas -0.66 >More info -0.74 >More info Control pseudomonas treated whole seedling Original data GEO bulk
25 leaf blade in FRD -0.69 >More info -0.71 >More info leaf blade in WL leaf blades Original data GEO bulk
26 MYB12OX/tt4 -0.70 >More info -0.69 >More info Col-0 aerial part Original data
27 mil4 sid2 -0.71 >More info -0.67 >More info Col rosettes Original data GEO bulk
28 Red/FR Light 4 h -0.66 >More info -0.71 >More info FarRed Light 4 h Original data Light treatments
29 Atss3 Light1 0.72 >More info 0.65 >More info Atss3 Dark0.5 Original data GEO bulk
30 FarRed Light 4 h 0.65 >More info 0.72 >More info White Light 4 h Original data Light treatments
31 1 h Light Total RNA 0.67 >More info 0.69 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
32 mkk2 control rep -0.68 >More info -0.67 >More info Col-0 Time 0 rep Original data GEO bulk
33 WT Na2S 0.69 >More info 0.65 >More info WT water Na2S leaf Original data GEO bulk
34 Col(gl) leaf 100mM NaCl -0.70 >More info -0.64 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
35 Heat no recovery 0.73 >More info 0.61 >More info Mock no recovery seedling Original data GEO bulk
36 Blue Light 4 h 0.63 >More info 0.71 >More info White Light 4 h Original data Light treatments
37 Col(gl) 100mM NaCl -0.70 >More info -0.64 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
38 WT hypoxia -0.70 >More info -0.63 >More info WT normoxia whole rosette Original data
39 Light 4h steady-state 0.68 >More info 0.65 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
40 leaf blade in D -0.67 >More info -0.66 >More info leaf blade in WL leaf blades Original data GEO bulk
41 ein2 1% sucrose 14-day-old 0.67 >More info 0.65 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
42 12h volatiles Sm. R3089 -0.66 >More info -0.65 >More info 12h untreated whole seedling Original data GEO bulk
43 mutant acs9B (single mutant) -0.67 >More info -0.64 >More info col control (single mutant) Original data GEO bulk
44 Light 4h polysome-bound 0.69 >More info 0.62 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
45 tt4 -0.65 >More info -0.66 >More info Col-0 aerial part Original data
46 AmGSTF1 expressor -0.64 >More info -0.67 >More info WT leaf tissue Original data GEO bulk
47 pap1-D/tt4 -0.65 >More info -0.65 >More info Col-0 aerial part Original data
48 camta1 leaf water -0.65 >More info -0.65 >More info Col-0 leaf water leaf Original data GEO bulk
49 WOX1-1 -0.66 >More info -0.64 >More info Col-0 aerial part Original data
50 ape2 low light -0.66 >More info -0.64 >More info Ws-2 low light Original data GEO bulk
51 M6PR transgenic 0mM NaCl -0.71 >More info -0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
52 WT salt 12 h 0.70 >More info 0.60 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
53 sfr3 control 0.59 >More info 0.71 >More info WT control All aerial tissue Original data GEO bulk
54 seedling 1.5h after HZE atm-1 -0.64 >More info -0.65 >More info seedling day 1 unirradiated atm-1 1.5h Original data
55 phyB mutant 16C 10hrs 0.72 >More info 0.57 >More info 16C 10h whole plant excluding roots Original data GEO bulk
56 Dark 40 min pls UV-A 5 min 0.64 >More info 0.64 >More info Dark 45 min Original data Light treatments
57 WT Red light 1h 0.61 >More info 0.67 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
58 MIL4 ox -0.68 >More info -0.60 >More info Col Original data GEO bulk
59 sid2 -0.65 >More info -0.62 >More info Col rosettes Original data GEO bulk
60 npr1 sni1 brca2a 0.63 >More info 0.64 >More info npr1 sni1 water water seedling Original data GEO bulk
61 FarRed Light 45min -0.49 >More info -0.77 >More info White Light 45min Original data Light treatments
62 ebs Pool -0.69 >More info -0.57 >More info Ler Pool seedling Original data GEO bulk
63 6h volatiles Sm. R3089 -0.60 >More info -0.65 >More info 6h untreated whole seedling Original data GEO bulk
64 3x(p) -0.56 >More info -0.68 >More info 2x two week old seedlings Original data
65 Light 0.5h polysome-bound 0.57 >More info 0.67 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
66 Col-0 DCA 6d -0.61 >More info -0.62 >More info Col-0 MOCK 6d Original data GEO bulk
67 Whole root - S 3H 0.64 >More info 0.59 >More info Whole root - S 0H Original data GEO bulk
68 low CO2 + dark -0.62 >More info -0.61 >More info normal CO2 + light Original data GEO bulk
69 vte1-1 3d vernalization 0.67 >More info 0.55 >More info WT 3d vernalization Original data GEO bulk
70 swn-7 -0.66 >More info -0.56 >More info Col whole plant Original data GEO bulk
71 detached inflorescences 24h -0.62 >More info -0.60 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
72 Dark 40min pls UV-AB 5min 0.64 >More info 0.58 >More info Dark 45 min Original data Light treatments
73 xyl-grown cell culture- 1h 1mM Fru 0.45 >More info 0.77 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
74 npr1 sni1 ssn2 0.72 >More info 0.49 >More info npr1 sni1 water water seedling Original data GEO bulk
75 ARR22-ox 0.73 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
76 WT NAA 2h -0.66 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
77 Homozygous-AtcesA6 0.61 >More info 0.59 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
78 ein2-1 24hpi A. brassicicola 0.62 >More info 0.58 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
79 penta mutant (higher order mutant) -0.61 >More info -0.59 >More info col control (higher order mutant) Original data GEO bulk
80 short 17-degree- 0.41 >More info 0.79 >More info control short Original data GEO bulk
81 short 12-degree- 0.41 >More info 0.79 >More info control short Original data GEO bulk
82 mutant acs2C (single mutant) -0.61 >More info -0.58 >More info col control (single mutant) Original data GEO bulk
83 elf3-7-16ºC 0.57 >More info 0.62 >More info WT-16ºC Original data GEO bulk
84 4h decapitation 0.52 >More info 0.67 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
85 tmm1-inflorescence-tips 0.47 >More info 0.72 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
86 seedling 1.5h after HZE WT -0.62 >More info -0.56 >More info seedling day 1 unirradiated WT 1.5h Original data
87 pap1-D -0.64 >More info -0.54 >More info Col-0 aerial part Original data
88 rGRF3x35S:GIF -0.63 >More info -0.55 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
89 aba2 1% sucrose 12-day-old -0.56 >More info -0.62 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
90 mutant acs6E (single mutant) 0.64 >More info 0.54 >More info col control (single mutant) Original data GEO bulk
91 OsRLCK253 expressing 0.59 >More info 0.59 >More info WT seedlings Original data GEO bulk
92 dde2-2 24hpi A. brassicicola 0.58 >More info 0.60 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
93 Red Light 4 h -0.48 >More info -0.70 >More info White Light 4 h Original data Light treatments
94 max3GR24 (1 uM) 0.66 >More info 0.51 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
95 sid2-2 24hpi A. brassicicola 0.58 >More info 0.59 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
96 col 24h4c set4 0.58 >More info 0.59 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
97 det2 light-dark -0.62 >More info -0.54 >More info det2 light light-dark Original data GEO bulk
98 des1 water 0.64 >More info 0.52 >More info WT water water leaf Original data GEO bulk
99 lht1 untreated 0.66 >More info 0.50 >More info WT untreated untreated leaf Original data GEO bulk
100 low water potential 0.64 >More info 0.52 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
101 Root submergence 7h -0.63 >More info -0.53 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
102 1 h Light IP RNA 0.59 >More info 0.57 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
103 04h Col-0 0.59 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
104 oas-a1.1 root 0.59 >More info 0.57 >More info WT-Untreated Root Original data GEO bulk
105 hepta mutant (higher order mutant) -0.72 >More info -0.44 >More info col control (higher order mutant) Original data GEO bulk
106 pip3 At2g19270 RNAi 24 0.59 >More info 0.56 >More info Nd-1 whole plant Original data GEO bulk
107 Root submergence 24h -0.60 >More info -0.55 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
108 Col-0 drought 0.58 >More info 0.57 >More info Col-0 control Original data GEO bulk
109 CBF3 0mM NaCl -0.66 >More info -0.48 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
110 E.orontii Infection 6 h -0.62 >More info -0.52 >More info Uninfection 6 h Original data Elicitor treatments
111 mil4 -0.60 >More info -0.54 >More info Col rosettes Original data GEO bulk
112 apk1 apk2 0.63 >More info 0.51 >More info Col0-control whole rosette Original data GEO bulk
113 cop1 Seedling BL+ABA 0.55 >More info 0.59 >More info WT Seedling BL+ABA Original data GEO bulk
114 essp3/brm5 mutant 0.66 >More info 0.48 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
115 gun1-9 control 0.55 >More info 0.59 >More info Col-0 control Original data GEO bulk
116 Dark 44min pls RedLigh 1min 0.58 >More info 0.56 >More info Dark 45 min Original data Light treatments
117 ptpks2 0.40 >More info 0.74 >More info Col-WT leaves Original data GEO bulk
118 NJ15 0.39 >More info 0.75 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
119 Cd 18h root 0.57 >More info 0.56 >More info WT-Untreated Root Original data GEO bulk
120 ape2 high light -0.51 >More info -0.62 >More info Ws-2 high light Original data GEO bulk
121 WT-Dry 0.67 >More info 0.45 >More info WT-CK dehydration treatment 1h Original data
122 Homozygous-AtcesA4 0.52 >More info 0.60 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
123 Cocultivation 8 hrs leaf -0.56 >More info -0.55 >More info Mock cocultivation 8 hrs leaf Leaf Original data
124 E.orontii Infection 3 day -0.55 >More info -0.56 >More info Uninfection 3 day Original data Elicitor treatments
125 Col-0 +lincomycin -0.60 >More info -0.51 >More info Col-0 -lincomycin Original data GEO bulk
126 WT (Col) glucose 0.53 >More info 0.58 >More info WT (Col) glucose seedlings Original data GEO bulk
127 3x(m) -0.52 >More info -0.59 >More info 2x two week old seedlings Original data
128 camta1/2 warm -0.52 >More info -0.59 >More info WT 24h cold entire aerial part Original data GEO bulk
129 Transgenic LEC2GR Seedling 1h Dex 0.51 >More info 0.59 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
130 PRR5-VP 12h light on 0.53 >More info 0.57 >More info WT 12h light on whole plant Original data GEO bulk
131 miR mutant (higher order mutant) -0.72 >More info -0.38 >More info col control (higher order mutant) Original data GEO bulk
132 ANOXIA -0.46 >More info -0.64 >More info ANOXIA+SUCROSE Original data GEO bulk
133 xyl-grown cell culture- 1h 1mM Suc 0.44 >More info 0.66 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
134 amiR-tor induced 6d 0.56 >More info 0.53 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
135 COL-0-Fe--shoot 0.63 >More info 0.46 >More info COL-0-Ctrl--shoot shoot Original data
136 Light 0.5h steady-state 0.46 >More info 0.63 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
137 mkk1 24h BTH rep -0.58 >More info -0.51 >More info Col-0 24h BTH rep Original data GEO bulk
138 Wounding Stress3 h (shoot) 0.58 >More info 0.51 >More info Stress mock 3 h (shoot) Original data Stress treatments
139 Nicotinamide-73hr -0.59 >More info -0.50 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
140 Col leaf 100mM NaCl -0.59 >More info -0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
141 Col leaf 100mM NaCl -0.59 >More info -0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
142 Col 100mM NaCl -0.59 >More info -0.49 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
143 phr1 phl1 Shoot-Pi -0.61 >More info -0.47 >More info WT Shoot-Pi shoots Original data GEO bulk
144 GV3101 3hpi -0.48 >More info -0.60 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
145 camta1-2 -0.46 >More info -0.62 >More info Col-0-WT Original data GEO bulk
146 mkk2 24h BTH rep -0.53 >More info -0.54 >More info Col-0 24h BTH rep Original data GEO bulk
147 Atss3 Light4 0.56 >More info 0.51 >More info Atss3 Dark0.5 Original data GEO bulk
148 ein2-1 untreated 0.61 >More info 0.46 >More info WT untreated untreated Original data GEO bulk
149 shoot-10 μM DEX- 6 hr -0.66 >More info -0.41 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
150 sfr6 control 0.60 >More info 0.47 >More info WT control All aerial tissue Original data GEO bulk
151 Col-O low light -0.49 >More info -0.58 >More info Col-O bule light Original data GEO bulk
152 35S::KLU 0.47 >More info 0.60 >More info WT Shoot Original data
153 Root dark control 24h -0.57 >More info -0.49 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
154 Col-0 C2H4 24h -0.56 >More info -0.50 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
155 gai Flg22 2h -0.49 >More info -0.57 >More info Laer Flg22 2h leaf discs Original data GEO bulk
156 6h volatiles Sp. HRO-C48 -0.64 >More info -0.41 >More info 6h untreated whole seedling Original data GEO bulk
157 rdr1-1 0.50 >More info 0.55 >More info Col-0 Original data GEO bulk
158 WT (Col-0) inflorescence drought day 4 -0.54 >More info -0.51 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
159 ABA 1 h 0.35 >More info 0.70 >More info Mock 1 h Original data Basic hormone treatment of seedlings
160 ws 24h4c q8ws 0.55 >More info 0.49 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
161 Root dark control 7h -0.55 >More info -0.49 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
162 Dark 6h ivd -0.56 >More info -0.48 >More info 0h ivd Original data
163 Whole root - S 12H 0.60 >More info 0.44 >More info Whole root - S 0H Original data GEO bulk
164 Nicotinamide-93hr -0.52 >More info -0.51 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
165 erf104-ko H2O 4h 0.60 >More info 0.43 >More info Col-0 H2O 4h Original data GEO bulk
166 Dark 4 h pls UV-AB 5min 0.52 >More info 0.51 >More info Dark 4 h Original data Light treatments
167 seedling SPL13 -0.61 >More info -0.41 >More info seedling Col-0 Original data GEO bulk
168 hexa mutant (higher order mutant) -0.64 >More info -0.38 >More info col control (higher order mutant) Original data GEO bulk
169 vtc2 (I) -0.56 >More info -0.46 >More info Col (I) rosette Original data GEO bulk
170 shoot-10 μM DEX- 12 hr -0.55 >More info -0.47 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
171 Nicotinamide-69hr -0.58 >More info -0.44 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
172 MYB12OX -0.56 >More info -0.46 >More info Col-0 aerial part Original data
173 Col-0 (t-zeatin 3 h) 0.57 >More info 0.45 >More info Col-0 Original data Cytokinin treatment of seedlings
174 Col-0 +ABA LF 0.49 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
175 Col-0 Mock Shade -0.61 >More info -0.40 >More info Col-0 Mock WL seedlings Original data
176 light-hs 0.58 >More info 0.43 >More info light-control seedling Original data
177 C58 3hpi -0.53 >More info -0.48 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
178 phyABDE Rc50 0.40 >More info 0.61 >More info phyABDE Dark red light whole seedling Original data GEO bulk
179 WT+sucrose 0.47 >More info 0.54 >More info WT+no sugars rosette leaves Original data GEO bulk
180 WT 24h cold 0.48 >More info 0.53 >More info WT warm 24h cold entire aerial part Original data GEO bulk
181 pip3 At2g19270 RNAi 32 0.54 >More info 0.46 >More info Nd-1 whole plant Original data GEO bulk
182 abi4-102 (I) -0.53 >More info -0.47 >More info Col (I) rosette Original data GEO bulk
183 aerial organ callus inducing medium 12 h -0.53 >More info -0.47 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
184 INA -0.58 >More info -0.42 >More info CK INA seedling Original data
185 WT 1wk -P 0.51 >More info 0.49 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
186 FLIGHT TAGESB plate6 SHOOTS -0.55 >More info -0.45 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
187 mutant acs2B (single mutant) 0.66 >More info 0.34 >More info col control (single mutant) Original data GEO bulk
188 rosettes drought 0.49 >More info 0.51 >More info rosettes watered Original data GEO bulk
189 TaFLS overexpression line (OE2) -0.54 >More info -0.45 >More info Col-0 Rosette leaves Original data
190 flu dark 8hours/30 minute light -0.56 >More info -0.43 >More info col dark 8hours/30 minute light Original data GEO bulk
191 current injection 0.60 >More info 0.39 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
192 WT (Col-0) inflorescence drought day 3 0.51 >More info 0.48 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
193 IRP1-OE-Ctrl--shoot 0.56 >More info 0.43 >More info COL-0-Ctrl--shoot shoot Original data
194 short 10-degree- 0.42 >More info 0.57 >More info control short Original data GEO bulk
195 long 10-degree- 0.49 >More info 0.50 >More info control long Original data GEO bulk
196 irradiated leaf (WT 5d) 0.41 >More info 0.58 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
197 treated group 0.47 >More info 0.52 >More info Control group Original data
198 csn3-1 light 0.65 >More info 0.33 >More info WT light Original data GEO bulk
199 OsSAP11 expressing 0.50 >More info 0.48 >More info WT seedlings Original data GEO bulk
200 ein2-1 +elf18 2h 0.57 >More info 0.41 >More info WT +elf18 2h elf18 Original data GEO bulk
201 Mutant lwd1_lwd2 -0.39 >More info -0.59 >More info Wildtype for phy mutants Original data GEO bulk
202 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.39 >More info -0.59 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
203 pip3 At2g19270 TDNA 9 -0.47 >More info -0.51 >More info Col-0 whole plant Original data GEO bulk
204 ABA 3h 0.46 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
205 mbd4 mutant thaliana 10-day-old seedling -0.54 >More info -0.43 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
206 cca1-lhy 30m light -0.52 >More info -0.45 >More info 30m light whole seedlings Original data GEO bulk
207 rGRF -0.57 >More info -0.40 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
208 WT Shoot-Pi 0.64 >More info 0.33 >More info WT Shoot+Pi shoots Original data GEO bulk
209 csn5 (csn5a-2 csn5b) light 0.66 >More info 0.31 >More info WT light Original data GEO bulk
210 csn3-1 dark 0.58 >More info 0.39 >More info WT dark Original data GEO bulk
211 short 14-degree- 0.39 >More info 0.58 >More info control short Original data GEO bulk
212 long 12-degree- 0.42 >More info 0.55 >More info control long Original data GEO bulk
213 WT Atum 2h -0.53 >More info -0.43 >More info WT 0h Leaf tissue Original data GEO bulk
214 sfr6 drought 0.51 >More info 0.45 >More info WT drought All aerial tissue Original data GEO bulk
215 rosette leaves fdh -0.66 >More info -0.30 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
216 ein3 eil1 JA 0.52 >More info 0.44 >More info JA Whole seedling Original data GEO bulk
217 35S:GIF -0.72 >More info -0.24 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
218 FAMA induced 4h 0.39 >More info 0.57 >More info control 4h Whole seedling Original data GEO bulk
219 35SPaWRKY1 0.34 >More info 0.62 >More info Vector Seedlings including shoot and root Original data GEO bulk
220 DC3000 24h 0.41 >More info 0.55 >More info Mock 24h DC3000 Original data GEO bulk
221 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.46 >More info 0.50 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
222 mutant acs5D (single mutant) -0.40 >More info -0.55 >More info col control (single mutant) Original data GEO bulk
223 efr-1 untreated 0.51 >More info 0.44 >More info WT untreated untreated Original data GEO bulk
224 Col-7 Sucrose 0.50 >More info 0.45 >More info col-7 Original data GEO bulk
225 lht1 PstDC3000 48h 0.58 >More info 0.37 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
226 C24 24h cold 0.62 >More info 0.33 >More info Col 24h cold leaf Original data GEO bulk
227 Mutant ag-12(shoot apex) 0.53 >More info 0.42 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
228 Dry late day 0.43 >More info 0.52 >More info Wet late day water-limited whole rosette Original data GEO bulk
229 Col-0 INA 6d -0.54 >More info -0.40 >More info Col-0 MOCK 6d Original data GEO bulk
230 amiR-tor induced 3d 0.50 >More info 0.44 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
231 mp-B4149 mutant IAA 0.58 >More info 0.36 >More info GR-bdl IAA Original data GEO bulk
232 Mutant nph4-1_arf19-1 0.42 >More info 0.52 >More info Col Original data GEO bulk
233 ein2-1 +Pep2 2h 0.54 >More info 0.39 >More info WT +Pep2 2h Pep2 Original data GEO bulk
234 phyB mutant 16C 4hrs -0.65 >More info -0.28 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
235 anti-sense for AtAOX1a -0.51 >More info -0.42 >More info WT Original data GEO bulk
236 4x -0.57 >More info -0.36 >More info 2x two week old seedlings Original data
237 seedling 1.5h after Gamma WT 0.57 >More info 0.36 >More info seedling day 1 unirradiated WT 1.5h Original data
238 rosettes atx drought 0.36 >More info 0.57 >More info rosettes atx watered Original data GEO bulk
239 Bay-0-3h IAA -0.56 >More info -0.36 >More info Bay-0-0h IAA whole plant Original data GEO bulk
240 SOS1 0mM NaCl -0.56 >More info -0.36 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
241 gpa1-4/agb1-2 clean-air 3h -0.56 >More info -0.36 >More info Col clean-air 3h clean-air Original data GEO bulk
242 toc1-1-89hr 0.38 >More info 0.54 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
243 PNO8 12 h -0.33 >More info -0.59 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
244 bZIP1ko mutant N+Light- 0.29 >More info 0.63 >More info WT-sib N+Light- whole plant Original data GEO bulk
245 csn4-1 mutant 0.55 >More info 0.36 >More info WT dark Original data GEO bulk
246 cca1-lhy before light -0.51 >More info -0.40 >More info before light whole seedlings Original data GEO bulk
247 WT 90-105 min Xanthomonas 0.54 >More info 0.37 >More info WT T0 Original data GEO bulk
248 Apex mir-319b 17DAS 0.68 >More info 0.23 >More info Apex Col 14DAS Original data GEO bulk
249 ga1-3 SCL3OE 0.52 >More info 0.39 >More info ga1-3 whole root Original data
250 K starvation (shoot) 0.40 >More info 0.51 >More info Ws (shoot) Original data GEO bulk
251 Shoot -K 0.40 >More info 0.51 >More info Control-shoot Original data GEO bulk
252 Dark 6h hml -0.59 >More info -0.32 >More info 0h hml Original data
253 2hr transitory KNO3 PrR cell -0.32 >More info -0.59 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
254 mbd6 mutant thaliana 10-day-old seedling -0.52 >More info -0.38 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
255 mkk1 control rep -0.62 >More info -0.28 >More info Col-0 Time 0 rep Original data GEO bulk
256 Red/FR Light45min 0.13 >More info 0.77 >More info FarRed Light 45min Original data Light treatments
257 Salt Stress 24 h (shoot) 0.40 >More info 0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
258 Dark 6h wt -0.58 >More info -0.32 >More info 0h wt Original data
259 csn5 (csn5a-2 csn5b) dark 0.53 >More info 0.36 >More info WT dark Original data GEO bulk
260 Col leaf scrape 5 dpi 0.51 >More info 0.38 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
261 ORS1 induced -0.39 >More info -0.50 >More info mock-induced rosette leaves Original data GEO bulk
262 Imidazolinone EC50 0.52 >More info 0.36 >More info Carrier (Imidazolinone) Original data GEO bulk
263 Mutant cry1 (High Light) -0.36 >More info -0.52 >More info Col-0 (High Light) Original data GEO bulk
264 cry1 high light -0.36 >More info -0.52 >More info Col-O high light Original data GEO bulk
265 nar1-4/- -0.54 >More info -0.33 >More info WT whole seedling Original data GEO bulk
266 gapcp1gapcp2 0.50 >More info 0.37 >More info WT Original data GEO bulk
267 Dark 1day ivd -0.52 >More info -0.35 >More info 0h ivd Original data
268 DVL4 induced -0.51 >More info -0.36 >More info emptyvectordex Original data GEO bulk
269 Rsch 3d -0.51 >More info -0.36 >More info Rsch CA Leaves Original data
270 12h volatiles Sp. HRO-C48 -0.52 >More info -0.35 >More info 12h untreated whole seedling Original data GEO bulk
271 MG132 3 h 0.50 >More info 0.37 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
272 Ws-2 high light 0.36 >More info 0.51 >More info Ws-2 low light Original data GEO bulk
273 tumour -0.58 >More info -0.28 >More info non-tumor tumour Original data GEO bulk
274 Ibuprofen 3 h 0.52 >More info 0.33 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
275 Whole root - S 24H 0.54 >More info 0.31 >More info Whole root - S 0H Original data GEO bulk
276 Dark 1day wt -0.51 >More info -0.34 >More info 0h wt Original data
277 Dark 1day hml -0.52 >More info -0.32 >More info 0h hml Original data
278 long 14-degree- 0.34 >More info 0.50 >More info control long Original data GEO bulk
279 ein3 eil1 0.50 >More info 0.33 >More info Col-0 mock Whole seedling Original data GEO bulk
280 atmospheric CO2 low Mg shoot -0.56 >More info -0.27 >More info atmospheric CO2 normal Mg shoot Shoot Original data
281 npr1 sni1 SA -0.59 >More info -0.24 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
282 CHLM overexpression 0.52 >More info 0.30 >More info Col-0 estr green tissue Original data GEO bulk
283 Tsu -Fe 48h Shoots 0.50 >More info 0.32 >More info Tsu +Fe 24h Shoots Original data GEO bulk
284 SCR-GR Time 1H Dex -0.32 >More info -0.50 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
285 cs26 short-day 0.57 >More info 0.25 >More info Leaves-WT-SD leaf Original data GEO bulk
286 csn4-1 dark 0.58 >More info 0.24 >More info WT light Original data GEO bulk
287 A2hsfa1-ox in quadruple mutant 0.25 >More info 0.57 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
288 upf1 0.51 >More info 0.30 >More info WT whole plant Original data GEO bulk
289 24h volatiles Sp. HRO-C48 -0.51 >More info -0.30 >More info 24h untreated whole seedling Original data GEO bulk
290 M6PR transgenic leaf 100mM NaCl -0.24 >More info -0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
291 pGL1::GL1-GR Dex 4 hours 0.52 >More info 0.28 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
292 Light 3day wt 0.51 >More info 0.29 >More info 0h wt Original data
293 clf-28 -0.52 >More info -0.27 >More info Col whole plant Original data GEO bulk
294 hen1 0.57 >More info 0.22 >More info Ler Original data GEO bulk
295 Shoot submergence 7h -0.78 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
296 wavy -0.57 >More info -0.20 >More info WT Original data GEO bulk
297 ATR1 OE -0.60 >More info -0.17 >More info WT for ATR1/MYB51 Original data GEO bulk
298 ABA 0.5 h 0.20 >More info 0.57 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
299 nbp35-3/- -0.57 >More info -0.19 >More info WT whole seedling Original data GEO bulk
300 control leaf (cmt 5d) 0.53 >More info 0.23 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
301 35S:VND7-VP16-GR+CHX 0.10 >More info 0.66 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
302 phyABCDE Rc50 0.26 >More info 0.50 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
303 BI-1-30min IAA 0.54 >More info 0.20 >More info BI-1-0h IAA whole plant Original data GEO bulk
304 Whole root - S 48H 0.50 >More info 0.22 >More info Whole root - S 0H Original data GEO bulk
305 rosette leaves lcr -0.62 >More info -0.10 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
306 Apex octa 18DAS 0.54 >More info 0.17 >More info Apex Col 14DAS Original data GEO bulk
307 epiF3 0.51 >More info 0.19 >More info WT Col-0 aerial part Original data
308 shoot hypoxia pRBCS 0.17 >More info 0.52 >More info shoot hypoxia total Original data GEO bulk
309 MPK6 ox Shoot Hypoxia 0.16 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
310 seed germinating in countinuous light 24h SL 0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
311 10min Reillumination IP RNA -0.16 >More info -0.51 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
312 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
313 Mutant cry1 -0.12 >More info -0.52 >More info Col-0 Original data GEO bulk
314 cry1 low light -0.12 >More info -0.52 >More info Col-O low light Original data GEO bulk
315 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
316 hsfa2 KO -0.00 >More info 0.60 >More info WT (Col-0) whole seedling Original data GEO bulk
317 seedling 3h after HZE WT -0.61 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
318 CAX1/CAX3 mutant -0.50 >More info -0.09 >More info Col whole plant Original data GEO bulk
319 shoot hypoxia p35S -0.00 >More info 0.59 >More info shoot hypoxia total Original data GEO bulk
320 ahg2-1sid2-2 0.53 >More info 0.04 >More info WT (Col) control Original data GEO bulk
321 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
322 Col0-PsmES4326-24hpi -0.05 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
323 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
324 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
325 Cs shoot -0.14 >More info 0.62 >More info control shoot Original data GEO bulk
326 P.syringae vir 4 h (leaf) 0.15 >More info -0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
327 Heat shock optimum -0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
328 Leafminer damaged seedlings -0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
329 tcp13 -0.51 >More info 0.14 >More info WT inflorescences Original data GEO bulk
330 ABA control 0.16 >More info -0.53 >More info No ABA control Original data GEO bulk
331 npr1-3 MOCK 48h 0.16 >More info -0.52 >More info Col-0 MOCK 48h Original data GEO bulk
332 Mock pft1 leaf 0.56 >More info -0.21 >More info Mock Col-0 leaf water leaf Original data GEO bulk
333 light 0.52 >More info -0.18 >More info dark light seedling Original data GEO bulk
334 Infected pft1 leaf 0.23 >More info -0.57 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
335 siliques AtHb1 control -0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
336 Col BTH -0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk