4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Day Time Treatment
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List of experiments correlated with "Day Time Treatment"  Help Download transcriptome of top 30
Score Experiment Correlation from
Day Time Treatment		 Correlation to
Day Time Treatment		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Day Time Treatment 1.00 >More info 1.00 >More info Day Time Control 1hr white light pulse aerial rosette Original data
2 Night Time Treatment 0.83 >More info 0.82 >More info Night Time Control 1hr white light pulse aerial rosette Original data
3 Shoot dark control 24h -0.84 >More info -0.81 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
4 Shoot dark control 7h -0.84 >More info -0.80 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
5 Shoot submergence 24h -0.84 >More info -0.79 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
6 Col-0 WT HL 3h 0.81 >More info 0.77 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
7 30m light 0.71 >More info 0.85 >More info before light whole seedlings Original data GEO bulk
8 seedling 1.5h after HZE atm-1 -0.76 >More info -0.79 >More info seedling day 1 unirradiated atm-1 1.5h Original data
9 Pseudomonas -0.74 >More info -0.78 >More info Control pseudomonas treated whole seedling Original data GEO bulk
10 60m light 0.72 >More info 0.80 >More info before light whole seedlings Original data GEO bulk
11 low CO2 + dark -0.77 >More info -0.75 >More info normal CO2 + light Original data GEO bulk
12 1 h Light Total RNA 0.76 >More info 0.75 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
13 seedling 24h after Gamma WT 0.73 >More info 0.77 >More info seedling day 2 unirradiated WT 24h Original data
14 WT hypoxia -0.74 >More info -0.75 >More info WT normoxia whole rosette Original data
15 seedling 24h after Gamma atm-1 0.72 >More info 0.77 >More info seedling day 2 unirradiated atm-1 24h Original data
16 M6PR transgenic leaf 0mM NaCl -0.71 >More info -0.74 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
17 Light 4h steady-state 0.71 >More info 0.73 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
18 petiole in FRD -0.73 >More info -0.70 >More info petiole in WL petioles Original data GEO bulk
19 leaf blade in FRD -0.72 >More info -0.69 >More info leaf blade in WL leaf blades Original data GEO bulk
20 seedling 1.5h after HZE WT -0.72 >More info -0.68 >More info seedling day 1 unirradiated WT 1.5h Original data
21 Light 4h polysome-bound 0.71 >More info 0.69 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
22 WT cold 0.69 >More info 0.70 >More info WT control All aerial tissue Original data GEO bulk
23 detached inflorescences 24h -0.75 >More info -0.63 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
24 1 h Light IP RNA 0.69 >More info 0.68 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
25 shl-2 Pool -0.66 >More info -0.71 >More info Ler Pool seedling Original data GEO bulk
26 Col-0 DEX Shade -0.81 >More info -0.56 >More info Col-0 DEX WL seedlings Original data
27 Cocultivation 8 hrs leaf -0.66 >More info -0.70 >More info Mock cocultivation 8 hrs leaf Leaf Original data
28 Transgenic LEC2GR Seedling 1h Dex 0.64 >More info 0.71 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
29 Whole root - S 3H 0.65 >More info 0.70 >More info Whole root - S 0H Original data GEO bulk
30 Col-0 C2H4 24h -0.72 >More info -0.63 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
31 MYB12OX/tt4 -0.66 >More info -0.68 >More info Col-0 aerial part Original data
32 ein2 1% sucrose 14-day-old 0.68 >More info 0.66 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
33 WT (Col) glucose 0.64 >More info 0.70 >More info WT (Col) glucose seedlings Original data GEO bulk
34 mil4 sid2 -0.67 >More info -0.66 >More info Col rosettes Original data GEO bulk
35 ptpks2 0.59 >More info 0.74 >More info Col-WT leaves Original data GEO bulk
36 essp4/sdg8-5 mutant 0.76 >More info 0.57 >More info wild type leaf Original data GEO bulk
37 det2 light-dark -0.68 >More info -0.64 >More info det2 light light-dark Original data GEO bulk
38 Col(gl) 0mM NaCl -0.66 >More info -0.65 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
39 6h volatiles Sm. R3089 -0.62 >More info -0.69 >More info 6h untreated whole seedling Original data GEO bulk
40 Col(gl) leaf 0mM NaCl -0.66 >More info -0.65 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
41 sid2 -0.64 >More info -0.65 >More info Col rosettes Original data GEO bulk
42 penta mutant (higher order mutant) -0.66 >More info -0.63 >More info col control (higher order mutant) Original data GEO bulk
43 swn-7 -0.67 >More info -0.62 >More info Col whole plant Original data GEO bulk
44 WOX1-1 -0.64 >More info -0.64 >More info Col-0 aerial part Original data
45 AmGSTF1 expressor -0.58 >More info -0.70 >More info WT leaf tissue Original data GEO bulk
46 35S:GIF -0.61 >More info -0.66 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
47 Dark 6h ivd -0.66 >More info -0.61 >More info 0h ivd Original data
48 petiole in D -0.65 >More info -0.62 >More info petiole in WL petioles Original data GEO bulk
49 WT Red light 1h 0.60 >More info 0.66 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
50 MIL4 ox -0.64 >More info -0.62 >More info Col Original data GEO bulk
51 erf104-ko H2O 4h 0.71 >More info 0.55 >More info Col-0 H2O 4h Original data GEO bulk
52 Red/FR Light 4 h -0.58 >More info -0.67 >More info FarRed Light 4 h Original data Light treatments
53 max3GR24 (1 uM) 0.65 >More info 0.60 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
54 ebs Pool -0.68 >More info -0.57 >More info Ler Pool seedling Original data GEO bulk
55 ape2 low light -0.63 >More info -0.62 >More info Ws-2 low light Original data GEO bulk
56 leaf blade in D -0.65 >More info -0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
57 high-R:FR bud axillary 0.59 >More info 0.65 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
58 pap1-D/tt4 -0.58 >More info -0.66 >More info Col-0 aerial part Original data
59 gai Flg22 2h -0.63 >More info -0.61 >More info Laer Flg22 2h leaf discs Original data GEO bulk
60 Dark 4 h pls UV-AB 5min 0.61 >More info 0.63 >More info Dark 4 h Original data Light treatments
61 short 17-degree- 0.38 >More info 0.86 >More info control short Original data GEO bulk
62 tt4 -0.58 >More info -0.65 >More info Col-0 aerial part Original data
63 24h volatiles Sm. R3089 -0.59 >More info -0.64 >More info 24h untreated whole seedling Original data GEO bulk
64 Root submergence 7h -0.63 >More info -0.60 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
65 csn3-1 dark 0.67 >More info 0.55 >More info WT dark Original data GEO bulk
66 WT Red light 18h 0.59 >More info 0.63 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
67 2d dark-grown WT(Col-0)/1 hr red light 0.60 >More info 0.62 >More info 2d dark-grown WT seedling Original data GEO bulk
68 oas-a1.1 root 0.57 >More info 0.65 >More info WT-Untreated Root Original data GEO bulk
69 sdg8-2 mutant 0.71 >More info 0.51 >More info wild type leaf Original data GEO bulk
70 Whole root - S 12H 0.64 >More info 0.58 >More info Whole root - S 0H Original data GEO bulk
71 FarRed Light 4 h 0.54 >More info 0.67 >More info White Light 4 h Original data Light treatments
72 Col-0 shade -0.55 >More info -0.66 >More info Col-0 light seedlings Original data GEO bulk
73 sfr2 control 0.73 >More info 0.48 >More info WT control All aerial tissue Original data GEO bulk
74 csn5 (csn5a-2 csn5b) dark 0.66 >More info 0.54 >More info WT dark Original data GEO bulk
75 3x(p) -0.61 >More info -0.58 >More info 2x two week old seedlings Original data
76 phyABDE Rc50 0.54 >More info 0.65 >More info phyABDE Dark red light whole seedling Original data GEO bulk
77 4d red light grown hmr-5 seedlings -0.61 >More info -0.58 >More info 4d red light grown WT(Col-0) seedlings Original data
78 Dark 1day ivd -0.68 >More info -0.50 >More info 0h ivd Original data
79 Dark 1day wt -0.68 >More info -0.50 >More info 0h wt Original data
80 mutant acs9B (single mutant) -0.61 >More info -0.57 >More info col control (single mutant) Original data GEO bulk
81 mil4 -0.59 >More info -0.59 >More info Col rosettes Original data GEO bulk
82 Wounding Stress3 h (shoot) 0.61 >More info 0.57 >More info Stress mock 3 h (shoot) Original data Stress treatments
83 mutant acs6E (single mutant) 0.61 >More info 0.57 >More info col control (single mutant) Original data GEO bulk
84 WT-Dry 0.58 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
85 hepta mutant (higher order mutant) -0.70 >More info -0.47 >More info col control (higher order mutant) Original data GEO bulk
86 Dark 1day hml -0.68 >More info -0.48 >More info 0h hml Original data
87 Root submergence 24h -0.60 >More info -0.56 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
88 Atss3 Light1 0.59 >More info 0.57 >More info Atss3 Dark0.5 Original data GEO bulk
89 short 12-degree- 0.41 >More info 0.75 >More info control short Original data GEO bulk
90 mkk2 control rep -0.58 >More info -0.57 >More info Col-0 Time 0 rep Original data GEO bulk
91 Blue Light 4 h 0.55 >More info 0.60 >More info White Light 4 h Original data Light treatments
92 Col-0 DCA 6d -0.54 >More info -0.60 >More info Col-0 MOCK 6d Original data GEO bulk
93 pap1-D -0.61 >More info -0.53 >More info Col-0 aerial part Original data
94 csn4-1 mutant 0.61 >More info 0.53 >More info WT dark Original data GEO bulk
95 ape2 high light -0.52 >More info -0.62 >More info Ws-2 high light Original data GEO bulk
96 cop1 Seedling BL+ABA 0.58 >More info 0.56 >More info WT Seedling BL+ABA Original data GEO bulk
97 cca1-lhy before light -0.60 >More info -0.54 >More info before light whole seedlings Original data GEO bulk
98 FarRed Light 45min -0.44 >More info -0.70 >More info White Light 45min Original data Light treatments
99 Dark 6h wt -0.67 >More info -0.46 >More info 0h wt Original data
100 Col-0 +lincomycin -0.55 >More info -0.58 >More info Col-0 -lincomycin Original data GEO bulk
101 sfr6 drought 0.58 >More info 0.55 >More info WT drought All aerial tissue Original data GEO bulk
102 M6PR transgenic 0mM NaCl -0.61 >More info -0.52 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
103 camta1 leaf water -0.55 >More info -0.58 >More info Col-0 leaf water leaf Original data GEO bulk
104 essp3/brm5 mutant 0.62 >More info 0.51 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
105 Dark 40min pls UV-AB 5min 0.55 >More info 0.58 >More info Dark 45 min Original data Light treatments
106 dTLEc systemic wounding -0.59 >More info -0.53 >More info wt systemic wounding leaves Original data GEO bulk
107 12h volatiles Sm. R3089 -0.58 >More info -0.54 >More info 12h untreated whole seedling Original data GEO bulk
108 Root dark control 24h -0.59 >More info -0.53 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
109 Red Light 4 h -0.44 >More info -0.68 >More info White Light 4 h Original data Light treatments
110 sfr6 control 0.67 >More info 0.44 >More info WT control All aerial tissue Original data GEO bulk
111 Dark 6h hml -0.67 >More info -0.44 >More info 0h hml Original data
112 ein2-1 untreated 0.61 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
113 Root dark control 7h -0.58 >More info -0.53 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
114 COL-0-Fe--shoot 0.70 >More info 0.41 >More info COL-0-Ctrl--shoot shoot Original data
115 vte1-1 3d vernalization 0.64 >More info 0.46 >More info WT 3d vernalization Original data GEO bulk
116 pip3 At2g19270 TDNA 9 -0.54 >More info -0.56 >More info Col-0 whole plant Original data GEO bulk
117 Dark 3day ivd -0.61 >More info -0.49 >More info 0h ivd Original data
118 elf3-7-16ºC 0.53 >More info 0.57 >More info WT-16ºC Original data GEO bulk
119 Dark 2day wt -0.63 >More info -0.47 >More info 0h wt Original data
120 Dark 40 min pls UV-A 5 min 0.48 >More info 0.62 >More info Dark 45 min Original data Light treatments
121 OsRLCK253 expressing 0.56 >More info 0.53 >More info WT seedlings Original data GEO bulk
122 Dark 3day wt -0.62 >More info -0.47 >More info 0h wt Original data
123 ga1-3 scl3-1 0.56 >More info 0.52 >More info ga1-3 whole root Original data
124 Nicotinamide-93hr -0.58 >More info -0.50 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
125 ein3 eil1 JA 0.57 >More info 0.51 >More info JA Whole seedling Original data GEO bulk
126 WT salt 12 h 0.60 >More info 0.48 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
127 exo70A1 -0.65 >More info -0.42 >More info Col-0 whole plant Original data GEO bulk
128 Dark 3day hml -0.62 >More info -0.45 >More info 0h hml Original data
129 Nicotinamide-69hr -0.61 >More info -0.46 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
130 camta1-2 -0.44 >More info -0.63 >More info Col-0-WT Original data GEO bulk
131 Dark 4 h pls RedLight 1min 0.50 >More info 0.57 >More info Dark 4 h Original data Light treatments
132 04h Col-0 0.50 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
133 WT resupplied Pi 4h 0.60 >More info 0.47 >More info WT complete seedlings Original data
134 low CO2 + light -0.56 >More info -0.50 >More info normal CO2 + light Original data GEO bulk
135 Whole root - S 24H 0.56 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
136 miR mutant (higher order mutant) -0.66 >More info -0.40 >More info col control (higher order mutant) Original data GEO bulk
137 Col-0 low oxygen -0.60 >More info -0.46 >More info Col-0 Original data GEO bulk
138 RGA-GR-DEX -0.54 >More info -0.52 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
139 sfr3 control 0.47 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
140 Col(gl) leaf 100mM NaCl -0.55 >More info -0.50 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
141 FLIGHT TAGESB plate6 SHOOTS -0.60 >More info -0.45 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
142 Col(gl) 100mM NaCl -0.55 >More info -0.50 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
143 Light 0.5h polysome-bound 0.48 >More info 0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
144 clf-28 -0.57 >More info -0.47 >More info Col whole plant Original data GEO bulk
145 Col-0 Mock Shade -0.66 >More info -0.38 >More info Col-0 Mock WL seedlings Original data
146 WT Na2S 0.54 >More info 0.50 >More info WT water Na2S leaf Original data GEO bulk
147 cngc4 -0.48 >More info -0.56 >More info Ws-2 Seedlings Original data GEO bulk
148 mutant acs2C (single mutant) -0.55 >More info -0.48 >More info col control (single mutant) Original data GEO bulk
149 ARR22-ox 0.55 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
150 edr1 36 h powdery mildew -0.60 >More info -0.43 >More info Col-0 36 h powdery mildew Original data GEO bulk
151 aerial organ callus inducing medium 12 h -0.49 >More info -0.54 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
152 pif4pif5 mut 1h FR 0.57 >More info 0.45 >More info WT 1h FR Original data GEO bulk
153 cca1-lhy 15m light -0.47 >More info -0.55 >More info 15m light whole seedlings Original data GEO bulk
154 low R/FR JA spray -0.44 >More info -0.58 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
155 phyB mutant 16C 4hrs -0.63 >More info -0.38 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
156 WT 90-105 min Xanthomonas 0.56 >More info 0.45 >More info WT T0 Original data GEO bulk
157 CHLM overexpression 0.56 >More info 0.45 >More info Col-0 estr green tissue Original data GEO bulk
158 ein2-1 +elf18 2h 0.56 >More info 0.45 >More info WT +elf18 2h elf18 Original data GEO bulk
159 Nicotinamide-73hr -0.54 >More info -0.47 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
160 AtLysM RLK1 mutant water 0.60 >More info 0.40 >More info WT water Original data GEO bulk
161 gai Flg22 1h -0.54 >More info -0.46 >More info Laer Flg22 1h leaf discs Original data GEO bulk
162 lht1 untreated 0.54 >More info 0.46 >More info WT untreated untreated leaf Original data GEO bulk
163 short 10-degree- 0.40 >More info 0.60 >More info control short Original data GEO bulk
164 6h volatiles Sp. HRO-C48 -0.65 >More info -0.34 >More info 6h untreated whole seedling Original data GEO bulk
165 seedling SPL13 -0.56 >More info -0.43 >More info seedling Col-0 Original data GEO bulk
166 ein2-1 +Pep2 2h 0.54 >More info 0.45 >More info WT +Pep2 2h Pep2 Original data GEO bulk
167 Col leaf 100mM NaCl -0.54 >More info -0.45 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
168 Col leaf 100mM NaCl -0.54 >More info -0.45 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
169 mbd6 mutant thaliana 10-day-old seedling -0.58 >More info -0.41 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
170 Col 100mM NaCl -0.54 >More info -0.45 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
171 gun4-1 -0.54 >More info -0.45 >More info WT Col-0 seedling Original data GEO bulk
172 35S::ERF104 H2O 4h 0.63 >More info 0.36 >More info Col-0 H2O 4h Original data GEO bulk
173 eto1-4 + AVG -0.50 >More info -0.49 >More info eto1-4 whole seedling Original data GEO bulk
174 tumour -0.55 >More info -0.44 >More info non-tumor tumour Original data GEO bulk
175 aba2 1% sucrose 12-day-old -0.56 >More info -0.43 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
176 ANOXIA -0.38 >More info -0.61 >More info ANOXIA+SUCROSE Original data GEO bulk
177 Dark 2day hml -0.60 >More info -0.38 >More info 0h hml Original data
178 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.50 >More info 0.48 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
179 35SpBVR3 -0.51 >More info -0.47 >More info WT Original data GEO bulk
180 WT NAA 2h -0.52 >More info -0.46 >More info WT 0h Leaf tissue Original data GEO bulk
181 mkk1/mkk2 control rep -0.52 >More info -0.46 >More info Col-0 Time 0 rep Original data GEO bulk
182 Dark 4 h pls UV-A 5 min 0.44 >More info 0.54 >More info Dark 4 h Original data Light treatments
183 npr1 -0.39 >More info -0.59 >More info WT(COL) Original data GEO bulk
184 CBF3 0mM NaCl -0.55 >More info -0.42 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
185 mbd4 mutant thaliana 10-day-old seedling -0.62 >More info -0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
186 oas-a1.1 Cd 24h 0.52 >More info 0.45 >More info Cd 24h root Shoot Original data GEO bulk
187 npr1 sni1 ssn2 0.61 >More info 0.36 >More info npr1 sni1 water water seedling Original data GEO bulk
188 DVL4 induced -0.55 >More info -0.42 >More info emptyvectordex Original data GEO bulk
189 E.orontii Infection 3 day -0.45 >More info -0.52 >More info Uninfection 3 day Original data Elicitor treatments
190 Light 0.5h steady-state 0.39 >More info 0.58 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
191 WT Seedling BL 0.43 >More info 0.54 >More info WT Seedling Dark Original data GEO bulk
192 col 24h4c set4 0.46 >More info 0.51 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
193 Heat no recovery 0.56 >More info 0.40 >More info Mock no recovery seedling Original data GEO bulk
194 gun1gun5 drak pretreated -0.51 >More info -0.45 >More info WT drak pretreated Original data GEO bulk
195 current injection 0.50 >More info 0.46 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
196 A2hsfa1-ox in quadruple mutant 0.45 >More info 0.51 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
197 rGRF3x35S:GIF -0.57 >More info -0.38 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
198 IRP1-OE-Ctrl--shoot 0.60 >More info 0.35 >More info COL-0-Ctrl--shoot shoot Original data
199 shoot-10 μM DEX- 12 hr -0.54 >More info -0.40 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
200 short 14-degree- 0.39 >More info 0.55 >More info control short Original data GEO bulk
201 sex1-3 -0.38 >More info -0.56 >More info Col-WT leaves Original data GEO bulk
202 Cd 18h root 0.51 >More info 0.43 >More info WT-Untreated Root Original data GEO bulk
203 35S::MBF1c -0.53 >More info -0.41 >More info control Original data GEO bulk
204 shoot-10 μM DEX- 6 hr -0.61 >More info -0.33 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
205 cca1-lhy 30m light -0.50 >More info -0.43 >More info 30m light whole seedlings Original data GEO bulk
206 CHLD reduction 0.52 >More info 0.41 >More info Col-0 dex green tissue Original data GEO bulk
207 3d old, both 10mM sucrose and 0.2µM SMX 0.51 >More info 0.42 >More info control Whole seedling Original data GEO bulk
208 Dark 44min pls RedLigh 1min 0.38 >More info 0.54 >More info Dark 45 min Original data Light treatments
209 C24 24h cold 0.58 >More info 0.34 >More info Col 24h cold leaf Original data GEO bulk
210 WT (Col-0) inflorescence drought day 3 0.50 >More info 0.42 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
211 C58 3hpi -0.42 >More info -0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
212 Whole root - S 48H 0.51 >More info 0.40 >More info Whole root - S 0H Original data GEO bulk
213 sdg2 0.52 >More info 0.39 >More info wt seedling Original data GEO bulk
214 efr-1 untreated 0.51 >More info 0.40 >More info WT untreated untreated Original data GEO bulk
215 Seedling-HeatStressed TOTALmRNA -0.55 >More info -0.36 >More info Seedling-control TOTALmRNA seedling Original data
216 4x -0.56 >More info -0.34 >More info 2x two week old seedlings Original data
217 phyABCDE Rc50 0.34 >More info 0.56 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
218 WT+sucrose 0.34 >More info 0.56 >More info WT+no sugars rosette leaves Original data GEO bulk
219 Col-0 (t-zeatin 3 h) 0.53 >More info 0.37 >More info Col-0 Original data Cytokinin treatment of seedlings
220 WT roots - Fe -0.33 >More info -0.57 >More info WT roots + Fe Roots Original data GEO bulk
221 gpa1-4/agb1-2 clean-air 3h -0.52 >More info -0.37 >More info Col clean-air 3h clean-air Original data GEO bulk
222 Col-0 norflurazon -0.50 >More info -0.39 >More info Col-0 control Original data GEO bulk
223 mutant acs2B (single mutant) 0.54 >More info 0.35 >More info col control (single mutant) Original data GEO bulk
224 pmr5 -0.54 >More info -0.35 >More info Col-0 rosette Original data GEO bulk
225 rrd1 IBA 0.39 >More info 0.50 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
226 hen1 0.57 >More info 0.32 >More info Ler Original data GEO bulk
227 npr1 sni1 brca2a 0.54 >More info 0.34 >More info npr1 sni1 water water seedling Original data GEO bulk
228 cs26 short-day 0.54 >More info 0.34 >More info Leaves-WT-SD leaf Original data GEO bulk
229 gul2-1 bri1-5 mutant -0.54 >More info -0.34 >More info WT 7 day-old whole seedlings Original data
230 csn3-1 light 0.53 >More info 0.35 >More info WT light Original data GEO bulk
231 ahg2-1sid2-2 0.60 >More info 0.28 >More info WT (Col) control Original data GEO bulk
232 piffq FR 3h 0.50 >More info 0.38 >More info WT FR 3h whole seedling Original data GEO bulk
233 Nicotinamide-65hr -0.53 >More info -0.35 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
234 low R/FR mock spray -0.31 >More info -0.57 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
235 MYB12OX -0.52 >More info -0.35 >More info Col-0 aerial part Original data
236 Propiconazole 12 h -0.37 >More info -0.50 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
237 pXVE:HA-EDM2-a untreated -0.36 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
238 flu dark 8hours/30 minute light -0.57 >More info -0.30 >More info col dark 8hours/30 minute light Original data GEO bulk
239 atmospheric CO2 low Mg shoot -0.57 >More info -0.30 >More info atmospheric CO2 normal Mg shoot Shoot Original data
240 spx1 spx2 complete 0.52 >More info 0.34 >More info WT complete seedlings Original data
241 csn5 (csn5a-2 csn5b) light 0.52 >More info 0.34 >More info WT light Original data GEO bulk
242 mkk1 control rep -0.50 >More info -0.36 >More info Col-0 Time 0 rep Original data GEO bulk
243 phr1 phl1 Shoot-Pi -0.50 >More info -0.36 >More info WT Shoot-Pi shoots Original data GEO bulk
244 Seedling-HeatStressed POLYSOMESmRNA -0.53 >More info -0.32 >More info Seedling-control POLYSOMESmRNA seedling Original data
245 seedling 1.5h after Gamma WT 0.54 >More info 0.30 >More info seedling day 1 unirradiated WT 1.5h Original data
246 Shoot submergence 7h -0.84 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
247 Full C2 T2 -0.55 >More info -0.27 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
248 long 17-degree- 0.30 >More info 0.52 >More info control long Original data GEO bulk
249 oligomycin 1 h -0.50 >More info -0.31 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
250 35S::HRE2 Aerobic -0.30 >More info -0.51 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
251 4d red light grown hmr-22 seedlings -0.60 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
252 Col-0 overexpressing At1g54160 control 0.50 >More info 0.30 >More info WT no treatement Original data GEO bulk
253 At1g54160 ox 0.50 >More info 0.30 >More info Col-0 Original data GEO bulk
254 FAMA induced 4h 0.28 >More info 0.52 >More info control 4h Whole seedling Original data GEO bulk
255 hexa mutant (higher order mutant) -0.55 >More info -0.24 >More info col control (higher order mutant) Original data GEO bulk
256 til1-1 22C -0.55 >More info -0.24 >More info Col-0 22C Original data GEO bulk
257 Apex mir-319b 17DAS 0.57 >More info 0.22 >More info Apex Col 14DAS Original data GEO bulk
258 FLIGHT TAGESB plate -0.50 >More info -0.28 >More info GROUND CONTROL TAGESB plate Original data
259 NJ15 0.10 >More info 0.68 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
260 L2.4 mutant 0.50 >More info 0.27 >More info Wt Original data GEO bulk
261 irradiated leaf (WT 5d) 0.26 >More info 0.51 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
262 rosette leaves fdh -0.54 >More info -0.21 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
263 seed germinating in countinuous light 24h SL 0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
264 nbp35-3/- -0.57 >More info -0.15 >More info WT whole seedling Original data GEO bulk
265 Dry pre-dawn 0.16 >More info 0.55 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
266 hog1-7 0.50 >More info 0.21 >More info wt whole seedling Original data GEO bulk
267 rGRF -0.57 >More info -0.14 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
268 mutant-line774 0.50 >More info 0.21 >More info WT-control whole plant Original data GEO bulk
269 CAX1/CAX3 mutant -0.56 >More info -0.14 >More info Col whole plant Original data GEO bulk
270 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
271 seedling 3h after HZE WT -0.71 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
272 ATR1 OE -0.51 >More info -0.17 >More info WT for ATR1/MYB51 Original data GEO bulk
273 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
274 35SPaWRKY1 0.12 >More info 0.55 >More info Vector Seedlings including shoot and root Original data GEO bulk
275 phyB mutant 16C 10hrs 0.61 >More info 0.06 >More info 16C 10h whole plant excluding roots Original data GEO bulk
276 Dark 2day ivd -0.65 >More info -0.01 >More info 0h ivd Original data
277 Cs root 0.08 >More info 0.57 >More info control root Original data GEO bulk
278 bri1-116 -0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
279 R. solani AG2-1 0.51 >More info 0.12 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
280 seedling 3h after Gamma WT 0.51 >More info 0.10 >More info seedling day 1 unirradiated WT 3h Original data
281 wavy -0.50 >More info -0.10 >More info WT Original data GEO bulk
282 Mock pft1 leaf 0.50 >More info 0.10 >More info Mock Col-0 leaf water leaf Original data GEO bulk
283 npr1-3 MOCK 48h -0.03 >More info -0.53 >More info Col-0 MOCK 48h Original data GEO bulk
284 agb1 gpa1 +ABA LF -0.50 >More info -0.03 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
285 tfl1-1-23ºC -0.57 >More info 0.06 >More info WT-23ºC Original data GEO bulk
286 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
287 Leafminer damaged seedlings -0.13 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
288 Col0-PsmES4326-24hpi -0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
289 light 0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
290 Laer pretreat GA Flg22 1h -0.33 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
291 siliques AtHb1 control -0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
292 Heat shock optimum -0.39 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
293 Col BTH -0.47 >More info 0.67 >More info Col rosettes Original data GEO bulk