4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 Root 100 mM ATP 30 min
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List of experiments correlated with "Col-0 Root 100 mM ATP 30 min"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 Root 100 mM ATP 30 min		 Correlation to
Col-0 Root 100 mM ATP 30 min		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 Root 100 mM ATP 30 min 1.00 >More info 1.00 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
2 dorn1-1 Root 100 mM ATP 30 min -0.83 >More info -0.77 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
3 phr1 Shoot-Pi 0.76 >More info 0.80 >More info WT Root-Pi shoots Original data GEO bulk
4 phr1 phl1 Root-Pi -0.67 >More info -0.79 >More info WT Shoot+Pi roots Original data GEO bulk
5 afb3-1 2h KNO3 0.58 >More info 0.85 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
6 atmyc2 cop1 Seedling Dark 0.68 >More info 0.70 >More info WT Seedling Dark Original data GEO bulk
7 toc1-1-85hr 0.58 >More info 0.77 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
8 WT-16ºC -0.67 >More info -0.68 >More info WT-23ºC Original data GEO bulk
9 cop1 Seedling Dark 0.58 >More info 0.75 >More info WT Seedling Dark Original data GEO bulk
10 SCL3 OE -0.74 >More info -0.59 >More info Col-0 whole root Original data GEO bulk
11 vtc2 mature somatic embryo 0.56 >More info 0.77 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
12 WT Seedling BL 0.54 >More info 0.73 >More info WT Seedling Dark Original data GEO bulk
13 Differentiation 36h -0.66 >More info -0.58 >More info Differentiation 0h leaves Original data
14 CabpBVR2 -0.54 >More info -0.70 >More info WT Original data GEO bulk
15 Differentiation 48h -0.66 >More info -0.57 >More info Differentiation 0h leaves Original data
16 Col-0 low oxygen -0.54 >More info -0.67 >More info Col-0 Original data GEO bulk
17 4C 1h 0.46 >More info 0.75 >More info 4C 0h Original data GEO bulk
18 9 hr Hypoxia Total RNA 0.63 >More info 0.57 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
19 9 hr Hypoxia 1 hr recovery Total RNA 0.62 >More info 0.56 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
20 phyB Dark 0.58 >More info 0.59 >More info WT(Ler) Dark Original data GEO bulk
21 bri1-116 0.44 >More info 0.73 >More info Col seedling Original data GEO bulk
22 SA 0.57 >More info 0.59 >More info WT mock Whole seedling Original data GEO bulk
23 Col-0 wt Hypoxic 0.59 >More info 0.57 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
24 Differentiation 24h -0.64 >More info -0.51 >More info Differentiation 0h leaves Original data
25 elf3-7-23ºC -0.49 >More info -0.66 >More info WT-23ºC Original data GEO bulk
26 toc1-1-81hr 0.45 >More info 0.70 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
27 bak1-3 +Pep2 2h 0.58 >More info 0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
28 seedlings + TSA 0.63 >More info 0.51 >More info control seedlings 10-day old whole seedling Original data GEO bulk
29 WT light 0.45 >More info 0.68 >More info WT dark Original data GEO bulk
30 P.p 6hai 0.60 >More info 0.53 >More info At-Control roots Original data GEO bulk
31 hira-root -0.55 >More info -0.58 >More info WT-root root Original data
32 WT 30μM arsenate 8 hours. 0.61 >More info 0.51 >More info WT control (not supplemented). Original data
33 1h +Pi -0.49 >More info -0.63 >More info 1h -Pi root Original data GEO bulk
34 bbx24 in Simulated Shade -0.48 >More info -0.64 >More info WT in simulated shade shade seedling Original data
35 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.52 >More info 0.59 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
36 Differentiation 12h -0.57 >More info -0.53 >More info Differentiation 0h leaves Original data
37 mdh -0.54 >More info -0.55 >More info Col Original data GEO bulk
38 2 hr Hypoxia Total RNA 0.56 >More info 0.53 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
39 toc1-1-53hr 0.44 >More info 0.65 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
40 Col-0 low oxygen 0.57 >More info 0.52 >More info Col-0 control low oxygen root Original data GEO bulk
41 AtLysM RLK1 mutant water 0.58 >More info 0.51 >More info WT water Original data GEO bulk
42 WT chitooctaose 0.59 >More info 0.49 >More info WT water Original data GEO bulk
43 phyAphyB Dark -0.51 >More info -0.57 >More info phyB Dark Original data GEO bulk
44 CeO2 germinant -0.44 >More info -0.64 >More info Millipore Water germinant CeO2 seedling Original data
45 K starvation (root) 0.62 >More info 0.45 >More info Ws (root) Original data GEO bulk
46 toc1-1-65hr 0.46 >More info 0.61 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
47 oligomycin 1 h 0.48 >More info 0.59 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
48 NAA -AA -0.52 >More info -0.54 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
49 Root -K 0.62 >More info 0.44 >More info Control-root Original data GEO bulk
50 P.p 2.5hai 0.53 >More info 0.52 >More info At-Control roots Original data GEO bulk
51 aerial organ callus inducing medium 96 h -0.39 >More info -0.65 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
52 WT Root Hypoxia 0.49 >More info 0.55 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
53 WT Rc50 0.42 >More info 0.62 >More info WT Dark red light whole seedling Original data GEO bulk
54 3m.KCl 0.59 >More info 0.44 >More info To. KCl 14 day old Roots Original data GEO bulk
55 root hypoxia total 0.51 >More info 0.52 >More info root control total Original data GEO bulk
56 Mutant axr3-1 (IAA) 0.47 >More info 0.56 >More info Col (IAA) Original data GEO bulk
57 csn5 (csn5a-2 csn5b) dark 0.51 >More info 0.51 >More info WT dark Original data GEO bulk
58 OXUPB1-2 meristematic zone 0.53 >More info 0.49 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
59 WT(Ler) Rc50 0.41 >More info 0.61 >More info WT(Ler) Dark Original data GEO bulk
60 root endodermis -S -0.44 >More info -0.57 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
61 sfr6 drought -0.41 >More info -0.60 >More info WT drought All aerial tissue Original data GEO bulk
62 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.44 >More info 0.56 >More info 2d dark-grown WT seedling Original data GEO bulk
63 WT drought 0.44 >More info 0.56 >More info WT control All aerial tissue Original data GEO bulk
64 TAMM27 roots 2hr KCl control 0.43 >More info 0.57 >More info Col0 roots 2hr KCl control root Original data GEO bulk
65 dorn1-1 Root MES buffer 30 min 0.33 >More info 0.67 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
66 Control KNO3 roots - 8hours 0.51 >More info 0.48 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
67 MPK6 ox Root Hypoxia 0.54 >More info 0.45 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
68 toc1-1-73hr 0.34 >More info 0.65 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
69 toc1-1-57hr 0.47 >More info 0.52 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
70 root columella root cap -S -0.52 >More info -0.46 >More info root columella root cap pH5.7 Original data GEO bulk
71 BLM+INA 0.50 >More info 0.48 >More info CK BLM and INA seedling Original data
72 10mM sucrose -0.52 >More info -0.46 >More info control Whole seedling Original data GEO bulk
73 Col upon hypoxia 6 hrs 0.47 >More info 0.51 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
74 35SpBVR3 -0.42 >More info -0.56 >More info WT Original data GEO bulk
75 rsa3-1 Na 24h 0.38 >More info 0.60 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
76 P.p 10.5hai 0.55 >More info 0.42 >More info At-Control roots Original data GEO bulk
77 P.p 30hai 0.56 >More info 0.41 >More info At-Control roots Original data GEO bulk
78 Mutant ga1-5 -0.44 >More info -0.53 >More info Ler-1 Original data Comparison of plant hormone related mutant
79 Whole root - low pH 12H 0.42 >More info 0.55 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
80 fri-flc -0.50 >More info -0.46 >More info WT Original data GEO bulk
81 AgNO3 3 h 0.37 >More info 0.59 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
82 Col-0 V. longisporum-inoculated 48 hpi 0.40 >More info 0.55 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
83 mp-B4149 mutant IAA 0.54 >More info 0.41 >More info GR-bdl IAA Original data GEO bulk
84 Mutant arf19-1 -0.37 >More info -0.58 >More info Col Original data GEO bulk
85 WT(Ler) Rc15 0.37 >More info 0.58 >More info WT(Ler) Dark Original data GEO bulk
86 low CO2 + light 0.40 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
87 BLM 0.53 >More info 0.41 >More info CK BLM seedling Original data
88 5-Triiodobenzoic acid3 h 0.37 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
89 plant (tga2-5-6) 4h phytoprostane A1 0.43 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
90 WT Red light 18h 0.34 >More info 0.60 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
91 ckh2 CK25 0.39 >More info 0.54 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
92 arr-BA-sample 0.40 >More info 0.53 >More info Wt-BA-sample seedling Original data
93 R. solani AG2-1 0.39 >More info 0.53 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
94 ckh2 CK0 0.39 >More info 0.53 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
95 nbp35-3/- 0.39 >More info 0.53 >More info WT whole seedling Original data GEO bulk
96 Root dark control 24h 0.51 >More info 0.41 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
97 root hypoxia pGL2 0.39 >More info 0.52 >More info root hypoxia total hypoxia root Original data GEO bulk
98 Whole root - low pH 1H 0.29 >More info 0.61 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
99 spx1 spx2 no Pi 0.50 >More info 0.39 >More info WT no Pi seedlings Original data
100 Dark 4 h pls RedLight 1min 0.25 >More info 0.64 >More info Dark 4 h Original data Light treatments
101 piffq FR 1h -0.39 >More info -0.50 >More info WT FR 1h whole seedling Original data GEO bulk
102 4C 2h(SOIL) 0.37 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
103 Whole root - low pH 3H 0.32 >More info 0.57 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
104 etiolated cop1BBX22-GFPox 0.35 >More info 0.53 >More info etiolated Col-0 whole seedlings Original data GEO bulk
105 R. solani AG8 0.35 >More info 0.53 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
106 Col-0 (t-zeatin 3 h) -0.30 >More info -0.58 >More info Col-0 Original data Cytokinin treatment of seedlings
107 IAA/inhibitor B Treated 0.30 >More info 0.58 >More info IAA Treated Original data GEO bulk
108 3m.KNO3 0.50 >More info 0.37 >More info To. KNO3 14 day old Roots Original data GEO bulk
109 35S::RSL4 -0.27 >More info -0.60 >More info Col-0 Control root Original data GEO bulk
110 root longitudinal zone-4 pH 4.6 0.31 >More info 0.55 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
111 toc1-1-49hr 0.36 >More info 0.50 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
112 35:SUB1C -0.35 >More info -0.51 >More info WT whole seedling Original data GEO bulk
113 Protoplast Induced 0.34 >More info 0.51 >More info Uninduced Original data GEO bulk
114 iron minus 0 h 0.50 >More info 0.35 >More info iron +0 h root Original data GEO bulk
115 35S-MIF1 dark grown -0.35 >More info -0.50 >More info Dark-grown WT control Original data GEO bulk
116 Dark -0.35 >More info -0.50 >More info Control Original data GEO bulk
117 sicy-192 cotyledons -0.32 >More info -0.52 >More info WT cotyledons cotyledons Original data
118 FLIGHT TAGESB plate6 ROOTS 0.26 >More info 0.58 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
119 mutant acs4A (single mutant) -0.53 >More info -0.30 >More info col control (single mutant) Original data GEO bulk
120 FarRed Light 45min 0.16 >More info 0.67 >More info White Light 45min Original data Light treatments
121 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
122 TA induced 0.26 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
123 TNT-seedlings 0.20 >More info 0.60 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
124 35S:RPS4 eds1-2 2h -0.29 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
125 Chemically 0.16 >More info 0.64 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
126 xyl-grown cell culture- 1h 1mM Fru 0.13 >More info 0.67 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
127 phyABDE 4-day dark- 2 hours Rc50 -0.28 >More info -0.51 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
128 abi1 hypocotyl 0.19 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
129 Rose Bengal 0.5 uM 0.28 >More info 0.50 >More info Control RB and PER Rose Bengal Original data
130 dor drought -0.14 >More info -0.63 >More info WT drought Original data GEO bulk
131 mpk6-ko H2O 4h 0.56 >More info 0.20 >More info Col-0 H2O 4h Original data GEO bulk
132 Dark 4 h pls UV-A 5 min 0.21 >More info 0.54 >More info Dark 4 h Original data Light treatments
133 DC3000 7h -0.24 >More info -0.51 >More info Mock 7h DC3000 Original data GEO bulk
134 myb61 xylem 0.17 >More info 0.58 >More info wt xylem xylem Original data GEO bulk
135 glk1 glk2 GLK1-GR +DEX 4h 0.50 >More info 0.24 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
136 Whole root - low pH 6H 0.15 >More info 0.58 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
137 2hr continuous KNO3 ECR cell -0.01 >More info -0.72 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
138 Col BTH 0.05 >More info 0.67 >More info Col rosettes Original data GEO bulk
139 Shoot apex inflorescence (after bolting) 0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
140 E.orontii Infection 6 h 0.12 >More info 0.60 >More info Uninfection 6 h Original data Elicitor treatments
141 WT 3H Cold 0.13 >More info 0.58 >More info WT control Original data GEO bulk
142 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
143 2hr transitory KNO3 ECR cell -0.08 >More info -0.61 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
144 Norflurazon -0.15 >More info -0.52 >More info Col-0 Original data GEO bulk
145 Col ozone 3h 0.12 >More info 0.55 >More info Col clean-air 3h ozone Original data GEO bulk
146 Norflurazon -0.15 >More info -0.52 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
147 seed germinating in countinuous light 24h SL -0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
148 Leafminer damaged seedlings 0.08 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
149 Infected pft1 leaf 0.08 >More info 0.55 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
150 Indigo Carmine 0.5 uM 0.10 >More info 0.52 >More info Control MV and IC Indigo Carmine Original data
151 Heat shock optimum -0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
152 Seedling KUA1-IOX est 0.04 >More info -0.65 >More info Seedling KUA1-IOX mock Original data
153 35S:MYB28 like miR 0.09 >More info 0.51 >More info WT for miR Original data GEO bulk
154 35S-MIF1 light grown -0.03 >More info -0.56 >More info Light-grown WT control Original data GEO bulk
155 clf-28 swn-7 -0.09 >More info -0.50 >More info Col whole plant Original data GEO bulk
156 pepr1-1 Pepr2-3 untreated -0.06 >More info 0.62 >More info WT untreated untreated Original data GEO bulk
157 Col0-PsmES4326-24hpi -0.05 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
158 cpctry -0.02 >More info 0.55 >More info Col Original data GEO bulk
159 2hr transitory KNO3 PrR cell -0.02 >More info 0.51 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
160 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
161 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
162 35S:miR396 0.18 >More info -0.63 >More info WT 0 days-old seedlings. Original data GEO bulk
163 4d red light grown hmr-22 seedlings 0.54 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data