4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on mbd6 mutant thaliana 10-day-old seedling
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Score Experiment Correlation from
mbd6 mutant thaliana 10-day-old seedling		 Correlation to
mbd6 mutant thaliana 10-day-old seedling		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mbd6 mutant thaliana 10-day-old seedling 1.00 >More info 1.00 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
2 mbd4 mutant thaliana 10-day-old seedling 0.84 >More info 0.81 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
3 seedlings-week-old RECA1-overexpressing
transgenic		 0.73 >More info 0.74 >More info seedlings-week-old Col-0 seedlings Original data
4 edr1 36 h powdery mildew 0.67 >More info 0.75 >More info Col-0 36 h powdery mildew Original data GEO bulk
5 cpr5scv1 0.61 >More info 0.79 >More info WT(COL) Original data GEO bulk
6 pho1 0.62 >More info 0.77 >More info Col2WT Original data GEO bulk
7 cpr5npr1svi1 0.58 >More info 0.77 >More info WT(COL) Original data GEO bulk
8 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.73 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
9 cpr5npr1 0.58 >More info 0.74 >More info WT(COL) Original data GEO bulk
10 SA 4mM 0.50 >More info 0.81 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
11 WT 1wk -P 0.57 >More info 0.73 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
12 leaf blade in D 0.57 >More info 0.73 >More info leaf blade in WL leaf blades Original data GEO bulk
13 Elevated CO2 AMPLE N DAY 0.58 >More info 0.70 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
14 R. solani AG8 0.63 >More info 0.63 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
15 edr1 18 h powdery mildew 0.57 >More info 0.69 >More info Col-0 18 h powdery mildew Original data GEO bulk
16 Col-0 9 hpi A. brassicicola 0.56 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
17 Elevated CO2 AMPLE N NIGHT 0.53 >More info 0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
18 pvip1 pvip2 0.57 >More info 0.67 >More info Col-0 whole rosettes Original data GEO bulk
19 ceh1 mutant 0.56 >More info 0.67 >More info Parent line Original data
20 WT 3h -P 0.53 >More info 0.70 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
21 petiole in D 0.55 >More info 0.68 >More info petiole in WL petioles Original data GEO bulk
22 1 h Light Total RNA -0.48 >More info -0.75 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
23 mbd11 mutant thaliana 10-day-old seedling 0.63 >More info 0.59 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
24 WT Col-0 Bgh inoculated 0.55 >More info 0.66 >More info WT Col-0 Un-inoculated Original data GEO bulk
25 total mRNA eif3k 0.64 >More info 0.55 >More info total mRNA WT aerial part Original data GEO bulk
26 cpr5 0.53 >More info 0.66 >More info WT(COL) Original data GEO bulk
27 mkk1/mkk2 control rep 0.60 >More info 0.59 >More info Col-0 Time 0 rep Original data GEO bulk
28 1 h Light IP RNA -0.48 >More info -0.71 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
29 aerial organ callus inducing medium 12 h 0.54 >More info 0.64 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
30 leaf blade in FRD 0.53 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
31 vtc2 (I) 0.57 >More info 0.61 >More info Col (I) rosette Original data GEO bulk
32 bHLH122 ox -0.55 >More info -0.62 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
33 GST NPP1 4 h (leaf) 0.55 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
34 anac017-2 AntimycinA 3h -0.56 >More info -0.60 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
35 WT in -N 0.55 >More info 0.61 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
36 30m light -0.48 >More info -0.68 >More info before light whole seedlings Original data GEO bulk
37 S15-118 0.46 >More info 0.70 >More info wt Original data GEO bulk
38 msh1 albino 0.51 >More info 0.64 >More info WT aerial part Original data GEO bulk
39 Col whole leaf 7dpi 0.53 >More info 0.62 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
40 ERF96OE 0.51 >More info 0.64 >More info WT leaf Original data
41 rosette leaves fdh 0.54 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
42 M6PR transgenic 0mM NaCl 0.54 >More info 0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
43 ein2-1 9 hpi A. brassicicola 0.52 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 Shoot submergence 24h 0.54 >More info 0.59 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
45 col-5 hrpA 12h 0.52 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
46 UV Stress 24 h (shoot) 0.48 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
47 camta3-2 0.42 >More info 0.71 >More info WT Original data GEO bulk
48 sfr6 drought -0.40 >More info -0.73 >More info WT drought All aerial tissue Original data GEO bulk
49 petiole in FRD 0.50 >More info 0.62 >More info petiole in WL petioles Original data GEO bulk
50 Col BTH 0.45 >More info 0.67 >More info Col rosettes Original data GEO bulk
51 Col0-PsmES4326-24hpi 0.50 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
52 mkk2 24h BTH rep 0.50 >More info 0.60 >More info Col-0 24h BTH rep Original data GEO bulk
53 seedlings protease IV 0.54 >More info 0.56 >More info seedlings nontreated control whole seedling Original data
54 cs26 short-day -0.52 >More info -0.58 >More info Leaves-WT-SD leaf Original data GEO bulk
55 aerial organ callus inducing medium 48 h 0.53 >More info 0.57 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
56 abi4 vtc2 (I) 0.53 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
57 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
58 Aerobic prt6 0.42 >More info 0.68 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
59 Col-Luc WT 3h antimycin A 0.53 >More info 0.56 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
60 M6PR transgenic leaf 0mM NaCl 0.46 >More info 0.63 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
61 pmr5 pmr6 0.51 >More info 0.58 >More info Col-0 Original data GEO bulk
62 tt4 0.52 >More info 0.57 >More info Col-0 aerial part Original data
63 coi1-16 ein2 sid2 ctrl -0.61 >More info -0.48 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
64 CT101 ozone 0.59 >More info 0.49 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
65 Col-0 mbs1-1 HL 3h -0.56 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
66 essp3/brm5 mutant -0.52 >More info -0.56 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
67 aerial organ callus inducing medium 24h 0.50 >More info 0.58 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
68 Col-0 C2H4 24h 0.51 >More info 0.57 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
69 IMI 4mM 0.52 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
70 Col whole leaf 5dpi 0.48 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
71 Aerobic e1 ate2 0.40 >More info 0.68 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
72 Col ozone 3h 0.38 >More info 0.70 >More info Col clean-air 3h ozone Original data GEO bulk
73 CMV-WT 0.49 >More info 0.59 >More info Mock-At Aerial tissues Original data GEO bulk
74 ice1 24H Cold 0.56 >More info 0.51 >More info WT 24H Cold Original data GEO bulk
75 MPK6 ox Shoot Hypoxia 0.35 >More info 0.72 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
76 gh3.5-1D 48 hpi 0.54 >More info 0.52 >More info Col-0 uninoculated Original data GEO bulk
77 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.62 >More info 0.44 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
78 aerial organ callus inducing medium 96 h 0.51 >More info 0.55 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
79 Col-0 INA 48h 0.46 >More info 0.60 >More info Col-0 MOCK 48h Original data GEO bulk
80 Col(gl) leaf 0mM NaCl 0.46 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
81 Col(gl) 0mM NaCl 0.46 >More info 0.60 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
82 WT-NOCO2 INFECTED 0.51 >More info 0.54 >More info WT-MOCK Original data GEO bulk
83 CAX1/CAX3 mutant 0.53 >More info 0.52 >More info Col whole plant Original data GEO bulk
84 mkk1/mkk2 24h BTH rep 0.50 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
85 CMV-A2b mutant 0.40 >More info 0.65 >More info Mock-At Aerial tissues Original data GEO bulk
86 wrky33 Bc inoculation 14h 0.59 >More info 0.45 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
87 Primisulfuron EC50 0.52 >More info 0.52 >More info Carrier (primisulfuron) Original data GEO bulk
88 1h light (+Lincomycin) 0.46 >More info 0.58 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
89 pepr1-1 Pepr2-3 +Pep2 2h -0.46 >More info -0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
90 S58-2 0.47 >More info 0.57 >More info wt Original data GEO bulk
91 Elevated CO2 fully expanded leaf 0.46 >More info 0.58 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
92 Seedling-HeatStressed TOTALmRNA 0.51 >More info 0.52 >More info Seedling-control TOTALmRNA seedling Original data
93 cpr5 0.48 >More info 0.55 >More info WT seedling Original data GEO bulk
94 Leafminer damaged seedlings 0.47 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
95 4x 0.44 >More info 0.59 >More info 2x two week old seedlings Original data
96 shoot-10 μM DEX- 6 hr 0.44 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
97 35S:RPS4 eds1-2 24h -0.50 >More info -0.52 >More info 35S:RPS4 24h leaves Original data
98 Te ozone 0.61 >More info 0.41 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
99 gh3.5D uninoculated -0.52 >More info -0.50 >More info Col-0 48 hpi Original data GEO bulk
100 Col-0 low oxygen 0.47 >More info 0.55 >More info Col-0 Original data GEO bulk
101 Laer pretreat GA Flg22 1h 0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
102 Atwrky63 high light -0.42 >More info -0.60 >More info Col0 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
103 Shoot -Cs 0.37 >More info 0.65 >More info Control-shoot Original data GEO bulk
104 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.59 >More info 0.42 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
105 WT Bc inoculation 14h 0.56 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
106 OH1 0.50 >More info 0.51 >More info Col-0 leaves Original data GEO bulk
107 GST 4 h (leaf) 0.37 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
108 flu over-tAPX 0.43 >More info 0.58 >More info WT Col Original data GEO bulk
109 35S::ERF104 Flg22 4h 0.49 >More info 0.52 >More info 35S::ERF104 H2O 4h Original data GEO bulk
110 aphid saliva treated 0.42 >More info 0.59 >More info control aphid saliva treated leaves Original data GEO bulk
111 Myzus persicae saliva 0.42 >More info 0.59 >More info Control Original data GEO bulk
112 anti-sense for AtAOX1a 0.36 >More info 0.65 >More info WT Original data GEO bulk
113 pepr1-1 Pepr2-3 +Pep2 10h -0.43 >More info -0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
114 E.coli TUV86 2 fliC 7h 0.49 >More info 0.52 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
115 Col-0 +lincomycin 0.48 >More info 0.53 >More info Col-0 -lincomycin Original data GEO bulk
116 aba3-1 0.35 >More info 0.66 >More info wt Original data GEO bulk
117 Sulfometuron EC50 0.48 >More info 0.53 >More info Carrier Original data GEO bulk
118 WT 1mM phosphate 8 hours. -0.42 >More info -0.59 >More info WT control (not supplemented). Original data
119 WT zebularine 5d -0.63 >More info -0.37 >More info WT mock 5d shoot apical meristem Original data
120 Col-0 48 hpi 0.52 >More info 0.48 >More info Col-0 uninoculated Original data GEO bulk
121 B.cinerea 18 h infection 0.39 >More info 0.61 >More info Mock 18 h Original data Botrytis cinerea infection
122 stn7-1 -0.40 >More info -0.60 >More info Col-0 rosette leaves Original data GEO bulk
123 psae1-3 -0.35 >More info -0.65 >More info WS rosette leaves Original data GEO bulk
124 anac017-1 H2O2 3h -0.48 >More info -0.52 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
125 Botrytis cinerea 18h 0.39 >More info 0.61 >More info control 18h Original data GEO bulk
126 pmr5 0.46 >More info 0.54 >More info Col-0 Original data GEO bulk
127 IRP1-OE-Fe--shoot 0.49 >More info 0.51 >More info COL-0-Fe--shoot shoot Original data
128 hrpA 7h 0.54 >More info 0.45 >More info Mock 7h hrpA Original data GEO bulk
129 60m light -0.42 >More info -0.57 >More info before light whole seedlings Original data GEO bulk
130 camta1/3 warm 0.42 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
131 E.coli 0157 H7 7h 0.43 >More info 0.56 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
132 mil4 BTH 0.43 >More info 0.56 >More info Col BTH rosettes Original data GEO bulk
133 del1-1 mutant 5d uninfected 0.38 >More info 0.61 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
134 Day Time Treatment -0.41 >More info -0.58 >More info Day Time Control 1hr white light pulse aerial rosette Original data
135 Seedling KUA1-IOX est 0.43 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
136 Col-0 ozone 0.59 >More info 0.39 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
137 8h-DC3000 avrRpm1 0.47 >More info 0.51 >More info 8h-DC3000 leaves Original data GEO bulk
138 Shoot dark control 7h 0.45 >More info 0.53 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
139 Triazolopyrimidine EC50 0.48 >More info 0.50 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
140 35S:RPS4 eds1-2 8h -0.46 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
141 shoot-10 μM DEX- 12 hr 0.40 >More info 0.58 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
142 LTN008-2 aza-dc 0.51 >More info 0.46 >More info LTN012-2 Mock Original data
143 R. solani AG2-1 0.39 >More info 0.58 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
144 smg7b-1 0.43 >More info 0.54 >More info WT whole plant Original data GEO bulk
145 SCL3 OE -0.35 >More info -0.62 >More info Col-0 whole root Original data GEO bulk
146 CHLM overexpression -0.40 >More info -0.57 >More info Col-0 estr green tissue Original data GEO bulk
147 Dex-rga(delta17) 4h GA4 -0.39 >More info -0.58 >More info Vector 4h GA4 shoots Original data GEO bulk
148 A. thaliana-A. lyrata hybrid -0.44 >More info -0.53 >More info A. thaliana mature leaves before flowering Original data GEO bulk
149 pap1-D/tt4 0.46 >More info 0.51 >More info Col-0 aerial part Original data
150 camta3-1 0.37 >More info 0.59 >More info WT Original data GEO bulk
151 wavy 0.45 >More info 0.51 >More info WT Original data GEO bulk
152 +1.6 mM Tween 20 1 h. 0.33 >More info 0.63 >More info +distilled water 1 h. Original data GEO bulk
153 col-5 DC3000 12h 0.42 >More info 0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
154 3x(p) 0.35 >More info 0.61 >More info 2x two week old seedlings Original data
155 Flagellin 4 h (leaf) 0.45 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
156 Mutant coi1(leaf) -0.43 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
157 24h +Pi -0.43 >More info -0.52 >More info 24h -Pi root Original data GEO bulk
158 0.125 mM gold 24 h 0.44 >More info 0.51 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
159 root Dosed gold 0.44 >More info 0.51 >More info root No gold .125 mM gold 24 h roots Original data
160 Col-0 2HS 0.22 >More info 0.73 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
161 ice1 3H Cold 0.51 >More info 0.43 >More info WT 3H Cold Original data GEO bulk
162 ARR22-ox (t-zeatin 3 h) 0.44 >More info 0.50 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
163 Atss3 Light4 -0.42 >More info -0.52 >More info Atss3 Dark0.5 Original data GEO bulk
164 eds16 whole leaf 5dpi -0.34 >More info -0.60 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
165 SCR-GR Time 1H Dex 0.34 >More info 0.60 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
166 HopZ1a treated 0.41 >More info 0.53 >More info col Original data GEO bulk
167 SLWF infested 0.41 >More info 0.53 >More info SLWF uninfested rosette tissue Original data GEO bulk
168 SAB 0.36 >More info 0.58 >More info COL seedling Original data
169 Leaf GLU1-KO 0.56 >More info 0.37 >More info Leaf Col(0) rosette leaves Original data GEO bulk
170 tZ -0.40 >More info -0.53 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
171 S14-150 0.39 >More info 0.54 >More info wt Original data GEO bulk
172 flu 0.41 >More info 0.52 >More info WT Col Original data GEO bulk
173 vtc1 (II) 0.42 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
174 gacA 0.33 >More info 0.60 >More info PA14 seedlings Original data GEO bulk
175 low CO2 + dark 0.32 >More info 0.61 >More info normal CO2 + light Original data GEO bulk
176 gpa1-4/agb1-2 ozone 2d -0.30 >More info -0.63 >More info Col ozone 2d ozone Original data GEO bulk
177 ice1 6H Cold 0.53 >More info 0.39 >More info WT 6H Cold Original data GEO bulk
178 P.p 10.5hai 0.38 >More info 0.54 >More info At-Control roots Original data GEO bulk
179 P.p 30hai 0.39 >More info 0.53 >More info At-Control roots Original data GEO bulk
180 pap1-D 0.36 >More info 0.56 >More info Col-0 aerial part Original data
181 sng1 0.35 >More info 0.57 >More info WT aerial region Original data GEO bulk
182 sid2-1 cold -0.35 >More info -0.57 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
183 2d dark-grown WT(Col-0)/1 hr red light -0.38 >More info -0.53 >More info 2d dark-grown WT seedling Original data GEO bulk
184 root - 08% oxygen - 2h 0.19 >More info 0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
185 Col whole leaf 1dpi -0.30 >More info -0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
186 Red Light 4 h 0.36 >More info 0.54 >More info White Light 4 h Original data Light treatments
187 Homozygous-AtcesA6 -0.38 >More info -0.52 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
188 P.p 6hai 0.38 >More info 0.52 >More info At-Control roots Original data GEO bulk
189 phyABDE Rc50 -0.38 >More info -0.52 >More info phyABDE Dark red light whole seedling Original data GEO bulk
190 Night Time Treatment -0.38 >More info -0.52 >More info Night Time Control 1hr white light pulse aerial rosette Original data
191 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.37 >More info -0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
192 shoot-10 μM DEX- 24hr 0.33 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
193 Col in Pi deficiency medium 0.25 >More info 0.64 >More info Col in control medium root Original data GEO bulk
194 Shoot dark control 24h 0.37 >More info 0.52 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
195 myb3 myb3r4d 0.25 >More info 0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
196 Light 4h steady-state -0.38 >More info -0.51 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
197 Light 4h polysome-bound -0.37 >More info -0.52 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
198 low R/FR JA spray 0.35 >More info 0.54 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
199 treated group 0.24 >More info 0.65 >More info Control group Original data
200 coi1-16 ein2 sid2 ozone 0.57 >More info 0.32 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
201 Stem tissue 5 days NAA 0.32 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
202 miR393 0h -0.23 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
203 WOX1-1 0.37 >More info 0.51 >More info Col-0 aerial part Original data
204 sav1-1 shade 0.31 >More info 0.57 >More info Col-0 shade seedlings Original data GEO bulk
205 Shoot -P 0.19 >More info 0.68 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
206 AvrRpm1 2 h (leaf) 0.36 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
207 gpa1 -ABA GC -0.28 >More info -0.59 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
208 WT-SA 0.36 >More info 0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
209 BLM+INA 0.37 >More info 0.50 >More info CK BLM and INA seedling Original data
210 shl-2 Pool 0.29 >More info 0.58 >More info Ler Pool seedling Original data GEO bulk
211 iron minus 6 h -0.30 >More info -0.56 >More info iron +6 h root Original data GEO bulk
212 sni1 0.31 >More info 0.55 >More info WT Original data GEO bulk
213 hira-root -0.30 >More info -0.56 >More info WT-root root Original data
214 L2.5 mutant -0.51 >More info -0.34 >More info Wt Original data GEO bulk
215 C24 ozone 0.54 >More info 0.31 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
216 eds16 whole leaf 0h UI -0.30 >More info -0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
217 Control KNO3 roots - 2days -0.33 >More info -0.52 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
218 gun5 control 0.28 >More info 0.57 >More info Col-0 control Original data GEO bulk
219 rGRF3x35S:GIF 0.27 >More info 0.58 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
220 12h-DC3000 avrRpm1 0.29 >More info 0.55 >More info 12h-DC3000 leaves Original data GEO bulk
221 WT 2-4h Xanthomonas 0.31 >More info 0.53 >More info WT T0 Original data GEO bulk
222 Ba1 UV 0.24 >More info 0.60 >More info Ba1 mock UV seedling Original data
223 ice1 control 0.52 >More info 0.31 >More info WT control Original data GEO bulk
224 TA induced 0.27 >More info 0.56 >More info Methanol TA Suspension cells Original data GEO bulk
225 ISOXABEN -0.29 >More info -0.54 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
226 35S:PCO1 hypoxia -0.33 >More info -0.50 >More info WT hypoxia whole rosette Original data
227 shoot control p35S 0.24 >More info 0.59 >More info shoot control total Original data GEO bulk
228 CLO 4mM 0.52 >More info 0.30 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
229 Hypoxic prt6 0.32 >More info 0.50 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
230 Col-0 shade 0.30 >More info 0.52 >More info Col-0 light seedlings Original data GEO bulk
231 ga1-3 SCL3OE -0.31 >More info -0.51 >More info ga1-3 whole root Original data
232 root longitudinal zone-3 -Fe -0.11 >More info -0.71 >More info root longitudinal zone-3 standard Original data GEO bulk
233 root - 04% oxygen - 2h 0.09 >More info 0.73 >More info root - 21% oxygen - 2h Original data GEO bulk
234 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
235 bak1-3 +Pep2 10h 0.31 >More info 0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
236 rpl24 total 0.50 >More info 0.30 >More info WT total seedling shoot/aerial seedling Original data
237 Homozygous-AtcesA4 -0.29 >More info -0.51 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
238 WT Shoot Hypoxia 0.17 >More info 0.63 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
239 GRX-overexpression seedlings control 0.29 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
240 gpa1 +ABA GC -0.25 >More info -0.54 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
241 AtMinD1 Temporal-induction 0.28 >More info 0.51 >More info Control whole plant Original data GEO bulk
242 hsfa2 KO -0.19 >More info -0.60 >More info WT (Col-0) whole seedling Original data GEO bulk
243 Cs shoot -0.19 >More info -0.60 >More info control shoot Original data GEO bulk
244 Elevated CO2 leaf primordia 0.29 >More info 0.50 >More info Ambient CO2 leaf primordia leaf primordia Original data
245 MPK6 ox Root Hypoxia 0.22 >More info 0.57 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
246 WT Seedling BL -0.26 >More info -0.51 >More info WT Seedling Dark Original data GEO bulk
247 Imbibed 1 h (seed) 0.09 >More info 0.67 >More info Dry seed Original data Time course of early seed germination
248 IXB induced 0.22 >More info 0.53 >More info Methanol IXB Suspension cells Original data GEO bulk
249 OE WRKY63.3 high light 0.22 >More info 0.53 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
250 Laer GA 2h -0.21 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
251 pif5 high R/FR -0.20 >More info -0.54 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
252 35S:RPS4 eds1-2 2h -0.20 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
253 GO5; 8h switch to ambient CO2 concentrations; 0.24 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
254 E.orontii Infection 3 day 0.17 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
255 Col-0 DCA 48h 0.14 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
256 iron minus 24h -0.15 >More info -0.58 >More info iron +24h root Original data GEO bulk
257 low CO2 + light 0.16 >More info 0.56 >More info normal CO2 + light Original data GEO bulk
258 shoot hypoxia p35S 0.21 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
259 ABA JA 24h 0.14 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
260 Mutant cry1 -0.51 >More info -0.19 >More info Col-0 Original data GEO bulk
261 cry1 low light -0.51 >More info -0.19 >More info Col-O low light Original data GEO bulk
262 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
263 ADD3 -0.19 >More info -0.51 >More info WT aerial part Original data GEO bulk
264 ptpks2 -0.13 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
265 WT+chitooctaose 0.14 >More info 0.54 >More info WT+water chitooctaose seedlings Original data GEO bulk
266 opr3 JA 2 h 0.16 >More info 0.52 >More info opr3 0 h Original data GEO bulk
267 agb1 -ABA LF 0.18 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
268 Red/FR Light45min -0.04 >More info 0.71 >More info FarRed Light 45min Original data Light treatments
269 root - 01% oxygen - 2h 0.06 >More info 0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
270 Brassinolide 0.5 h (det2) 0.08 >More info 0.54 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
271 MG132 3 h -0.11 >More info -0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
272 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
273 WT Red light 1h -0.06 >More info -0.53 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
274 GRX-overexpression seedlings MV 0.05 >More info 0.54 >More info WT seedlings MV Seedlings Original data GEO bulk
275 NJ15 0.04 >More info 0.54 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
276 Shoot submergence 7h 0.58 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
277 Shoot apex inflorescence (after bolting) -0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
278 Blue Light 45 min -0.02 >More info -0.54 >More info White Light 45min Original data Light treatments
279 FarRed Light 45min 0.03 >More info -0.56 >More info White Light 45min Original data Light treatments
280 root - 08% oxygen - 30min -0.08 >More info 0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
281 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
282 t-zeatin 0.5 h 0.00 >More info -0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
283 bri1-116 -0.21 >More info 0.73 >More info Col seedling Original data GEO bulk
284 root - 04% oxygen - 48h 0.00 >More info 0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
285 HairpinZ 4 h (leaf) 0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
286 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
287 JA 3h -0.09 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
288 root - 04% oxygen - 30min -0.07 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
289 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
290 P. infestans 6 h (leaf) 0.54 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
291 brat1nrpe1 0.50 >More info -0.34 >More info WT Original data