4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ex2 flu dark 8hours/30 minute light
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List of experiments correlated with "ex2 flu dark 8hours/30 minute light"  Help Download transcriptome of top 30
Score Experiment Correlation from
ex2 flu dark 8hours/30 minute light		 Correlation to
ex2 flu dark 8hours/30 minute light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ex2 flu dark 8hours/30 minute light 1.00 >More info 1.00 >More info col dark 8hours/30 minute light Original data GEO bulk
2 ex1 flu dark 8hours/30 minute light 0.94 >More info 0.91 >More info col dark 8hours/30 minute light Original data GEO bulk
3 flu dark 8hours/30 minute light 0.91 >More info 0.91 >More info col dark 8hours/30 minute light Original data GEO bulk
4 ex1ex2flu dark 8hours/30 minute light 0.94 >More info 0.88 >More info col dark 8hours/30 minute light Original data GEO bulk
5 sid2-avrB-6h 0.80 >More info 0.76 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
6 35S:RPS4 eds1-2 2h -0.82 >More info -0.70 >More info 35S:RPS4 2h leaves Original data
7 TNT-seedlings 0.72 >More info 0.79 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
8 WT+chitooctaose 0.77 >More info 0.70 >More info WT+water chitooctaose seedlings Original data GEO bulk
9 AtLysM RLK1 mutant chitooctaose -0.76 >More info -0.68 >More info WT chitooctaose Original data GEO bulk
10 OsSAP11 expressing -0.72 >More info -0.70 >More info WT seedlings Original data GEO bulk
11 chito-tetramer 0.76 >More info 0.65 >More info Col Mock Original data GEO bulk
12 chito-octamer 0.75 >More info 0.64 >More info Col Mock Original data GEO bulk
13 4C 2h(SOIL) 0.70 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
14 Rose Bengal 0.5 uM 0.70 >More info 0.67 >More info Control RB and PER Rose Bengal Original data
15 CDB1-Knockout -0.68 >More info -0.67 >More info WT Original data GEO bulk
16 Infected pft1 leaf 0.67 >More info 0.61 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
17 eds16 whole leaf 7d UI 0.55 >More info 0.72 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
18 HARAP aerobic -0.63 >More info -0.64 >More info WT aerobic aerobic Original data GEO bulk
19 2hr transitory KNO3 PrR cell 0.59 >More info 0.68 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
20 WT chitooctaose 0.72 >More info 0.55 >More info WT water Original data GEO bulk
21 4C 1h 0.56 >More info 0.71 >More info 4C 0h Original data GEO bulk
22 WT+H2O2 0.75 >More info 0.51 >More info WT H2O2 Original data GEO bulk
23 WT seedlings MV 0.73 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk
24 rosette Light Wounded 0.70 >More info 0.55 >More info rosette Light Control Original data GEO bulk
25 cys-c1 leaf 0.74 >More info 0.51 >More info Leaf-WT leaves Original data GEO bulk
26 wrky72-2-MOCK 0.67 >More info 0.57 >More info WT-MOCK Original data GEO bulk
27 Selenate (root) 0.72 >More info 0.52 >More info Ws (root) Original data GEO bulk
28 Root Selenate 0.72 >More info 0.52 >More info Root control 40 micromolar selenate Root Original data GEO bulk
29 Cycloheximide 3 h 0.77 >More info 0.47 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
30 bak1-3 +Pep2 2h 0.65 >More info 0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
31 WT-Dry 0.68 >More info 0.55 >More info WT-CK dehydration treatment 1h Original data
32 Leaf wounded 0.69 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
33 atgsnor1-3-avrB-6h 0.72 >More info 0.51 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
34 Protoplast Induced 0.57 >More info 0.66 >More info Uninduced Original data GEO bulk
35 Light 0.62 >More info 0.60 >More info Control Original data GEO bulk
36 abi1 hypocotyl 0.62 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
37 wrky72-1-MOCK 0.65 >More info 0.57 >More info WT-MOCK Original data GEO bulk
38 flu 0.72 >More info 0.49 >More info WT Col Original data GEO bulk
39 flu over-tAPX 0.74 >More info 0.47 >More info WT Col Original data GEO bulk
40 bHLH122 ox -0.62 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
41 inhibitor B Treated 0.72 >More info 0.48 >More info Negative Control Original data GEO bulk
42 M6PR transgenic leaf 0mM NaCl 0.66 >More info 0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
43 WT NAA 1h 0.54 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
44 Col leaf 100mM NaCl 0.66 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
45 Col leaf 100mM NaCl 0.66 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
46 Col 100mM NaCl 0.66 >More info 0.52 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
47 Col-0 2HS 0.70 >More info 0.48 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
48 IAA/inhibitor B Treated 0.72 >More info 0.46 >More info IAA Treated Original data GEO bulk
49 IAA/inhibitor A Treated 0.75 >More info 0.42 >More info IAA Treated Original data GEO bulk
50 myb61 xylem 0.67 >More info 0.50 >More info wt xylem xylem Original data GEO bulk
51 anti-sense for AtAOX1a 0.57 >More info 0.60 >More info WT Original data GEO bulk
52 myb61 cork 0.65 >More info 0.52 >More info wt cork cork Original data GEO bulk
53 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.59 >More info -0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
54 WT 3H Cold 0.62 >More info 0.53 >More info WT control Original data GEO bulk
55 Col(gl) 0mM NaCl 0.66 >More info 0.49 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
56 A. halleri highZn-leaf -0.51 >More info -0.64 >More info A. petraea highZn-leaf Original data GEO bulk
57 Leaf systemic 0.69 >More info 0.46 >More info Leaf control vegetative leaf Original data GEO bulk
58 Col(gl) leaf 0mM NaCl 0.66 >More info 0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
59 aba2 1% sucrose 12-day-old 0.69 >More info 0.46 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
60 aba1 hypocotyl 0.58 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
61 1 h Light Total RNA -0.58 >More info -0.56 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
62 cat2-short-day 4d 0.56 >More info 0.57 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
63 1h +Pi -0.56 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
64 Hydrogen Peroxide 500 uM 0.53 >More info 0.60 >More info Control RB and PER Hydrogen Peroxide Original data
65 Chitin 0.68 >More info 0.44 >More info Col C Original data GEO bulk
66 FLIGHT TAGESB plate6 ROOTS 0.60 >More info 0.52 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
67 eds16 whole leaf 3dpi 0.34 >More info 0.78 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
68 RPL18 TuMV inoculated polysomal RNA -0.66 >More info -0.45 >More info mock inoculated polysomal RNA PO Original data GEO bulk
69 OsRLCK253 expressing -0.65 >More info -0.46 >More info WT seedlings Original data GEO bulk
70 Col whole leaf 5 dpi -0.46 >More info -0.65 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
71 Col ozone 2d -0.45 >More info -0.66 >More info Col clean-air 2d ozone Original data GEO bulk
72 sid2-2 safener 0.54 >More info 0.57 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
73 inhibitor A Treated 0.74 >More info 0.36 >More info Negative Control Original data GEO bulk
74 1 h Light IP RNA -0.57 >More info -0.52 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
75 tbf1-SA 0.62 >More info 0.46 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
76 35S::MBF1c 0.73 >More info 0.35 >More info control Original data GEO bulk
77 Kas -Fe 24h Roots -0.58 >More info -0.50 >More info Kas +Fe 24h Roots Original data GEO bulk
78 Kas-1 -Fe 24h -0.58 >More info -0.50 >More info Kas-1 +Fe 24h roots Original data GEO bulk
79 lht1 PstDC3000 48h -0.61 >More info -0.47 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
80 Constans-mutant -0.56 >More info -0.51 >More info Col control above-ground whole plant Original data GEO bulk
81 seedlings protease IV 0.64 >More info 0.43 >More info seedlings nontreated control whole seedling Original data
82 protoplasts T1 [flg22] 0.43 >More info 0.64 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
83 lht1 untreated -0.58 >More info -0.49 >More info WT untreated untreated leaf Original data GEO bulk
84 Col whole leaf amplified 5 dpi -0.48 >More info -0.59 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
85 sid2-2 mock 0.53 >More info 0.53 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
86 2hr continuous KNO3 PrR cell 0.66 >More info 0.40 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
87 sng1 UV 0.54 >More info 0.52 >More info UV aerial region Original data GEO bulk
88 shoot-10 μM DEX- 6 hr 0.60 >More info 0.46 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
89 IAA 0.5 h 0.61 >More info 0.45 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
90 oligomycin 1 h 0.63 >More info 0.43 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
91 35S::RSL4 -0.51 >More info -0.54 >More info Col-0 Control root Original data GEO bulk
92 rosette Dark Wounded 0.70 >More info 0.35 >More info rosette Dark Control Original data GEO bulk
93 Col-Luc WT 3h antimycin A 0.70 >More info 0.35 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
94 atr mock 0.70 >More info 0.35 >More info WT mock shoot apical meristem Original data
95 leaf blade in D 0.57 >More info 0.47 >More info leaf blade in WL leaf blades Original data GEO bulk
96 WT flg22 2h 0.49 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
97 WT drought 0.57 >More info 0.46 >More info WT control All aerial tissue Original data GEO bulk
98 vtc2 mature somatic embryo 0.62 >More info 0.41 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
99 overexpresser LBD37 in -N 0.59 >More info 0.43 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
100 root protoplasts 40 mM NaCl 0.69 >More info 0.33 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
101 shoot-10 μM DEX- 24hr 0.52 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
102 RPL18 TuMV inoculated total RNA -0.59 >More info -0.43 >More info mock inoculated total RNA PO Original data GEO bulk
103 HARAP hypoxic 0.61 >More info 0.41 >More info hypoxic hypoxia Original data GEO bulk
104 ABA SA 24h -0.55 >More info -0.47 >More info EtOH 24h 24hr Original data GEO bulk
105 wnk8-2 untreated -0.61 >More info -0.41 >More info Col-0 untreated seedlings Original data GEO bulk
106 P.p 2.5hai 0.64 >More info 0.37 >More info At-Control roots Original data GEO bulk
107 1hr-pH4.5 0.56 >More info 0.45 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
108 vtc1-1 -0.61 >More info -0.40 >More info Col-0 whole plant Original data GEO bulk
109 TA induced 0.60 >More info 0.41 >More info Methanol TA Suspension cells Original data GEO bulk
110 OH1 -0.54 >More info -0.47 >More info Col-0 leaves Original data GEO bulk
111 30m light -0.40 >More info -0.61 >More info before light whole seedlings Original data GEO bulk
112 IXB induced 0.58 >More info 0.42 >More info Methanol IXB Suspension cells Original data GEO bulk
113 des1 water -0.65 >More info -0.35 >More info WT water water leaf Original data GEO bulk
114 WT Shoot Hypoxia 0.52 >More info 0.48 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
115 mutant acs6E (single mutant) -0.66 >More info -0.34 >More info col control (single mutant) Original data GEO bulk
116 GiantCell Root -0.65 >More info -0.35 >More info Control Root laser captured giant cells Original data GEO bulk
117 dcl2-1 -0.61 >More info -0.38 >More info Col-0 Original data GEO bulk
118 anac017-2 AntimycinA 3h -0.64 >More info -0.35 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
119 root cells stele -Fe 0.62 >More info 0.37 >More info whole roots standard Original data GEO bulk
120 WT AntimycinA 3h 0.67 >More info 0.32 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
121 ckh1 CK25 0.63 >More info 0.36 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
122 Leafminer damaged seedlings 0.43 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
123 max4 hypocotyl 0.58 >More info 0.40 >More info wt hypocotyl hypocotyl Original data GEO bulk
124 petiole in FRD 0.57 >More info 0.41 >More info petiole in WL petioles Original data GEO bulk
125 Laer Flg22(Agrobacterium) 1h -0.65 >More info -0.33 >More info Laer Control leaf discs Original data GEO bulk
126 sid2-2 9 hpi A. brassicicola 0.68 >More info 0.30 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
127 erf5 erf6 +chitooctaose 0.48 >More info 0.50 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
128 pmr4-1 powdery mildew -0.39 >More info -0.59 >More info WT powdery mildew uninoculated Original data GEO bulk
129 SLWF infested -0.42 >More info -0.56 >More info SLWF uninfested rosette tissue Original data GEO bulk
130 myb50 xylem 0.60 >More info 0.37 >More info wt xylem xylem Original data GEO bulk
131 pXVE:HA-EDM2-a untreated -0.43 >More info -0.54 >More info Col-0 untreated seedlings Original data GEO bulk
132 WT 3h -P 0.34 >More info 0.63 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
133 sid2 0.46 >More info 0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
134 ckh1 CK200 0.64 >More info 0.32 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
135 C24-30min IAA 0.67 >More info 0.29 >More info C24-0h IAA whole plant Original data GEO bulk
136 rosettes drought -0.54 >More info -0.41 >More info rosettes watered Original data GEO bulk
137 wnk8-3 untreated -0.51 >More info -0.44 >More info Col-0 untreated seedlings Original data GEO bulk
138 atr mitomycin C 0.60 >More info 0.34 >More info WT mitomycin C shoot apical meristem Original data
139 Full C2 T3 -0.50 >More info -0.44 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
140 Infected Col-0 leaf -0.67 >More info -0.26 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
141 Time-0 chr11-1chr17-1 0.58 >More info 0.35 >More info Time-0 Col-0 leaf explants Original data
142 Col-0 leaf drought -0.61 >More info -0.32 >More info Col-0 leaf water leaf Original data GEO bulk
143 seedling 12h after HZE WT 0.64 >More info 0.28 >More info seedling day 1 unirradiated WT 12h Original data
144 Col-0 wt Hypoxic 0.56 >More info 0.36 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
145 root hypoxia total 0.55 >More info 0.37 >More info root control total Original data GEO bulk
146 atgsnor1-1-avrB-6h -0.52 >More info -0.40 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
147 leaf blade in FRD 0.53 >More info 0.39 >More info leaf blade in WL leaf blades Original data GEO bulk
148 Elevated CO2 LIMITING N NIGHT -0.59 >More info -0.33 >More info Elevated CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
149 5-Triiodobenzoic acid3 h 0.60 >More info 0.32 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
150 Bur-0-30min IAA 0.58 >More info 0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
151 AsAKiin11 T2 -0.53 >More info -0.38 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
152 axr1 hypocotyl 0.55 >More info 0.35 >More info wt hypocotyl hypocotyl Original data GEO bulk
153 mutant acs2C (single mutant) -0.62 >More info -0.28 >More info col control (single mutant) Original data GEO bulk
154 Leafminer systemically damaged thaliana seedlings 0.66 >More info 0.24 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
155 2 hr Hypoxia Total RNA 0.59 >More info 0.31 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
156 Col-0-30min IAA 0.72 >More info 0.18 >More info Col-0-0h IAA whole plant Original data GEO bulk
157 cat2-short-day 2d 0.60 >More info 0.30 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
158 eds16 whole leaf 0h UI 0.21 >More info 0.69 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
159 Kas-1 -Fe 48h -0.61 >More info -0.28 >More info Kas-1 +Fe 24h roots Original data GEO bulk
160 Kas -Fe 48h Roots -0.61 >More info -0.28 >More info Kas +Fe 24h Roots Original data GEO bulk
161 HAP5-triple-mutant 0.54 >More info 0.35 >More info Col control above-ground whole plant Original data GEO bulk
162 seedling -S Exp 0.39 >More info 0.50 >More info seedling FN Exp seedling Original data
163 over-tAPX 0.19 >More info 0.70 >More info WT Col Original data GEO bulk
164 MIL4 ox -0.65 >More info -0.23 >More info Col Original data GEO bulk
165 gir flower 33d 0.52 >More info 0.36 >More info Col-7 flower 33d flower Original data GEO bulk
166 cat2-long-day 4d 0.50 >More info 0.38 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
167 eds16 whole leaf 7dpi 0.35 >More info 0.53 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
168 eds16 whole leaf 6hpi 0.30 >More info 0.58 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
169 E.orontii Infection 3 day -0.55 >More info -0.32 >More info Uninfection 3 day Original data Elicitor treatments
170 seedling 6h after HZE WT 0.63 >More info 0.24 >More info seedling day 1 unirradiated WT 6h Original data
171 seedling 24h after HZE atm-1 0.66 >More info 0.21 >More info seedling day 2 unirradiated atm-1 24h Original data
172 Col leaves 120h LT -0.62 >More info -0.25 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
173 9 hr Hypoxia 1 hr recovery Total RNA 0.58 >More info 0.29 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
174 ein5-1 ski2-3 0.52 >More info 0.34 >More info Col-0 aerial tissue Original data
175 6-trichlorophenoxyacetic acid 3 h 0.33 >More info 0.53 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
176 eds16 whole leaf 5dpi 0.32 >More info 0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
177 ask1 mutant flower buds 0.50 >More info 0.36 >More info Ler WT flower buds unopened flower buds Original data GEO bulk
178 mutant acs2B (single mutant) -0.59 >More info -0.27 >More info col control (single mutant) Original data GEO bulk
179 slr-1 2h NAA -0.57 >More info -0.29 >More info Col-0 2h NAA Original data GEO bulk
180 root cells endodermis and quiescent center -Fe 0.54 >More info 0.31 >More info whole roots standard Original data GEO bulk
181 root cells -Fe 0.51 >More info 0.34 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
182 mil4 -0.67 >More info -0.17 >More info Col rosettes Original data GEO bulk
183 mutant acs4A (single mutant) -0.50 >More info -0.34 >More info col control (single mutant) Original data GEO bulk
184 Wounding Stress3 h (shoot) 0.56 >More info 0.28 >More info Stress mock 3 h (shoot) Original data Stress treatments
185 Mutant NahG(leaf) 0.30 >More info 0.54 >More info Col-0 (leaf) Original data GEO bulk
186 MPK6 ox Shoot Hypoxia 0.31 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
187 pmr4-1 control -0.30 >More info -0.54 >More info WT control uninoculated Original data GEO bulk
188 root cells cortex -Fe 0.58 >More info 0.26 >More info whole roots standard Original data GEO bulk
189 elevated CO2 high Mg shoot -0.60 >More info -0.24 >More info atmospheric CO2 high Mg shoot Shoot Original data
190 AsAKiin11 T1 -0.55 >More info -0.28 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
191 35S-MIF1 light grown -0.29 >More info -0.54 >More info Light-grown WT control Original data GEO bulk
192 Pst-DC3000(hrpA)-4hpi -0.30 >More info -0.53 >More info Pst-DC3000-4hpi Original data GEO bulk
193 S58-2 -0.32 >More info -0.51 >More info wt Original data GEO bulk
194 P.p 6hai 0.60 >More info 0.23 >More info At-Control roots Original data GEO bulk
195 BI-1-30min IAA 0.61 >More info 0.22 >More info BI-1-0h IAA whole plant Original data GEO bulk
196 9 hr Hypoxia 1 hr recovery IP RNA 0.61 >More info 0.22 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
197 shoots bhlh100/101 100uM Fe 0.72 >More info 0.11 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
198 cys-c1 root -0.63 >More info -0.19 >More info Root-WT roots Original data GEO bulk
199 mutant acs1A (single mutant) -0.56 >More info -0.26 >More info col control (single mutant) Original data GEO bulk
200 vte2 leaves 0h LT -0.55 >More info -0.27 >More info Col leaves 0h LT h 9-11th adult leaves Original data
201 shoots WT 0uM Fe 0.58 >More info 0.24 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
202 FLIGHT TAGESB plate6 SHOOTS 0.58 >More info 0.24 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
203 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.54 >More info 0.27 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
204 MIL4 ox BTH -0.56 >More info -0.25 >More info Col BTH Original data GEO bulk
205 NJ15 0.59 >More info 0.22 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
206 piffq FR 1h -0.51 >More info -0.29 >More info WT FR 1h whole seedling Original data GEO bulk
207 seedling 24h after HZE WT 0.68 >More info 0.12 >More info seedling day 2 unirradiated WT 24h Original data
208 Col-0 low oxygen 0.64 >More info 0.16 >More info Col-0 Original data GEO bulk
209 AgNO3 3 h 0.55 >More info 0.25 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
210 IRP1-OE-Ctrl--root 0.54 >More info 0.26 >More info COL-0-Ctrl--root root Original data
211 Heat shock optimum 0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
212 lug3 leaves 0.61 >More info 0.18 >More info WT-leaves matured rosette leaves Original data GEO bulk
213 Mutant tga2_5_6 -0.27 >More info -0.52 >More info Col-0 Original data GEO bulk
214 plant (tga2-5-6) 4h control -0.27 >More info -0.52 >More info plant (Col-0) 4h control Original data GEO bulk
215 Col0-PsmES4326-24hpi 0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
216 P.p 10.5hai 0.58 >More info 0.21 >More info At-Control roots Original data GEO bulk
217 rao2 H2O2 3h -0.60 >More info -0.18 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
218 miR mutant (higher order mutant) 0.54 >More info 0.24 >More info col control (higher order mutant) Original data GEO bulk
219 Differentiation 24h -0.60 >More info -0.18 >More info Differentiation 0h leaves Original data
220 atr zebularine 0.59 >More info 0.19 >More info WT zebularine shoot apical meristem Original data
221 Bur-0-1h IAA 0.54 >More info 0.24 >More info Bur-0h IAA whole plant Original data GEO bulk
222 ga1-3 -0.57 >More info -0.21 >More info wt shoots Original data GEO bulk
223 Laer pretreat JA Flg22 1h 0.56 >More info 0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
224 Col-0 37C 0.56 >More info 0.21 >More info Col-0 22C Original data GEO bulk
225 tfl1-1-23ºC 0.51 >More info 0.26 >More info WT-23ºC Original data GEO bulk
226 WT 90-105 min Xanthomonas 0.56 >More info 0.21 >More info WT T0 Original data GEO bulk
227 GO5; harvested 8h continiously maintained in high
CO2;		 0.61 >More info 0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
228 ptpks2 -0.56 >More info -0.20 >More info Col-WT leaves Original data GEO bulk
229 rcf1-1 cold 24h 0.62 >More info 0.14 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
230 Col-0-1h IAA 0.66 >More info 0.10 >More info Col-0-0h IAA whole plant Original data GEO bulk
231 npr1-3 DCA 48h -0.55 >More info -0.21 >More info npr1-3 MOCK 48h Original data GEO bulk
232 Heat 6h-recover 48h 0.58 >More info 0.18 >More info Heat 6h rosettes - 5 leaves stage Original data
233 control leaf (cmt 5d) -0.54 >More info -0.22 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
234 NahG 0.15 >More info 0.61 >More info Col-0 Leaves Original data GEO bulk
235 VND6 0h 0.51 >More info 0.24 >More info wt 0h Original data GEO bulk
236 rdr2-1 -0.58 >More info -0.17 >More info Col-0 Original data GEO bulk
237 2hr transitory KNO3 SR cell 0.57 >More info 0.18 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
238 Mutant axr3-1 (IAA) 0.50 >More info 0.24 >More info Col (IAA) Original data GEO bulk
239 lug3 flowers 0.55 >More info 0.19 >More info WT-flowers flowers Original data GEO bulk
240 CMV-A2b mutant 0.58 >More info 0.16 >More info Mock-At Aerial tissues Original data GEO bulk
241 mkk2 control rep -0.58 >More info -0.16 >More info Col-0 Time 0 rep Original data GEO bulk
242 anac017-2 H2O2 3h -0.51 >More info -0.23 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
243 gpa1 +ABA GC -0.20 >More info -0.54 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
244 NAA 3h 0.56 >More info 0.17 >More info before treatment NAA root Original data GEO bulk
245 2 hr Hypoxia IP RNA 0.57 >More info 0.16 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
246 WT no Pi 0.64 >More info 0.09 >More info WT complete seedlings Original data
247 Laer Pst DC3000 12hpi -0.55 >More info -0.18 >More info Laer Control leaf discs Original data GEO bulk
248 tbf1-mock spray 0.55 >More info 0.17 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
249 Laer pretreat JA Flg22 0h 0.17 >More info 0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
250 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.58 >More info 0.14 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
251 Col-0 ozone 0.58 >More info 0.14 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
252 pepr1-1 Pepr2-3 +Pep2 2h -0.51 >More info -0.21 >More info WT +Pep2 2h Pep2 Original data GEO bulk
253 root cells columella root cap -Fe 0.51 >More info 0.21 >More info whole roots standard Original data GEO bulk
254 WT 6H Cold 0.62 >More info 0.10 >More info WT control Original data GEO bulk
255 light-hs -0.63 >More info -0.09 >More info light-control seedling Original data
256 IAA7mII over-expressor IAA Treated 0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
257 pab polysome -0.21 >More info -0.51 >More info WT polysome seedling shoot/aerial seedling Original data
258 3x(m) 0.08 >More info 0.64 >More info 2x two week old seedlings Original data
259 Kas2 roots 2hr KNO3 nitrogen 0.56 >More info 0.15 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
260 WT Na2S -0.56 >More info -0.15 >More info WT water Na2S leaf Original data GEO bulk
261 efr-1 untreated -0.54 >More info -0.17 >More info WT untreated untreated Original data GEO bulk
262 WT (Col-0) inflorescence drought day 4 0.54 >More info 0.17 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
263 ORE1-IOE-2h+Est -0.51 >More info -0.20 >More info ORE1-IOE-2h+Mock Estradiol Whole seedling Original data GEO bulk
264 2hr continuous KNO3 SR cell 0.57 >More info 0.14 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
265 rli 0.50 >More info 0.21 >More info WT whole plant Original data GEO bulk
266 cat2-2; 0h switch to ambient CO2 concentrations; 0.69 >More info 0.01 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
267 Ts5 roots 2hr KCl control 0.60 >More info 0.10 >More info Col0 roots 2hr KCl control root Original data GEO bulk
268 penta MeJA 1h 0.56 >More info 0.13 >More info Laer MeJA 1h leaf discs Original data GEO bulk
269 rts1-5 0.55 >More info 0.14 >More info null-mutant whole plant Original data GEO bulk
270 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
271 Bay-0-3h IAA -0.51 >More info -0.18 >More info Bay-0-0h IAA whole plant Original data GEO bulk
272 gai MeJA 1h -0.57 >More info -0.12 >More info Laer MeJA 1h leaf discs Original data GEO bulk
273 AsAKiin11 T3 -0.63 >More info -0.06 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
274 Mutant lwd1_lwd2 0.56 >More info 0.12 >More info Wildtype for phy mutants Original data GEO bulk
275 VND6 12h 0.51 >More info 0.17 >More info wt 12h Original data GEO bulk
276 oligomycin 4 h 0.52 >More info 0.16 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
277 WT 2-4h Xanthomonas 0.51 >More info 0.17 >More info WT T0 Original data GEO bulk
278 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.56 >More info 0.12 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
279 ga1-3 SCL3OE -0.52 >More info -0.16 >More info ga1-3 whole root Original data
280 tunicamycin -0.57 >More info -0.11 >More info DMF Original data GEO bulk
281 hypoxic -0.56 >More info -0.11 >More info WT aerobic hypoxia Original data GEO bulk
282 SAM SE 35S:AGL15 0.52 >More info 0.15 >More info SAM SE Col Original data GEO bulk
283 Cold Stress 24 h (root) 0.56 >More info 0.11 >More info Stress mock 24 h (root) Original data Stress treatments
284 Col-0-3h IAA 0.59 >More info 0.08 >More info Col-0-0h IAA whole plant Original data GEO bulk
285 F1 whole seedlings root 0.60 >More info 0.07 >More info Col whole seedlings root Seedlings Original data GEO bulk
286 Laer Flg22(Agrobacterium) 2h -0.53 >More info -0.13 >More info Laer Control leaf discs Original data GEO bulk
287 elevated CO2 normal Mg root 0.54 >More info 0.11 >More info atmospheric CO2 normal Mg root Root Original data
288 Laer Flg22+GA 1h 0.52 >More info 0.13 >More info Laer Control leaf discs Original data GEO bulk
289 WT resupplied Pi 4h 0.59 >More info 0.06 >More info WT complete seedlings Original data
290 pGL3::GL3-GR Dex 4 hours -0.50 >More info -0.14 >More info pGL3::GL3-GR mock 4 hours Original data GEO bulk
291 root Dosed gold 0.52 >More info 0.12 >More info root No gold .125 mM gold 24 h roots Original data
292 C24 ozone 0.51 >More info 0.13 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
293 0.125 mM gold 24 h 0.52 >More info 0.12 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
294 Atwrky63 high light 0.52 >More info 0.11 >More info Col0 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
295 dde2-2 24hpi A. brassicicola -0.50 >More info -0.13 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
296 WT H2O2 3h 0.51 >More info 0.12 >More info WT water 3h 3h_H2O2 Original data GEO bulk
297 Laer GA 2h -0.52 >More info -0.11 >More info Laer Control leaf discs Original data GEO bulk
298 Heat 6h -0.53 >More info -0.09 >More info At mock rosettes - 5 leaves stage Original data
299 Differentiation 36h -0.57 >More info -0.05 >More info Differentiation 0h leaves Original data
300 24h volatiles Sp. HRO-C48 0.50 >More info 0.12 >More info 24h untreated whole seedling Original data GEO bulk
301 ulp1c ulp1d 0.52 >More info 0.10 >More info col Original data GEO bulk
302 large flower buds J10B 0.04 >More info 0.58 >More info large flower buds J03B large flower buds Original data GEO bulk
303 dde2-2 9 hpi A. brassicicola 0.56 >More info 0.05 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
304 Differentiation 48h -0.54 >More info -0.07 >More info Differentiation 0h leaves Original data
305 rsl4 -0.52 >More info -0.09 >More info Col-0 Control root Original data GEO bulk
306 BI-1-3h IAA 0.53 >More info 0.07 >More info BI-1-0h IAA whole plant Original data GEO bulk
307 Nicotinamide-65hr 0.57 >More info 0.02 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
308 Laer pretreat GA Flg22 1h -0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
309 atsf1-2 mutant seedling -0.51 >More info -0.07 >More info Col-0 seedling seedlings Original data
310 FHY3p dark+DEX -0.53 >More info -0.05 >More info FHY3p dark+mock Original data GEO bulk
311 BI-1-1h IAA 0.57 >More info 0.01 >More info BI-1-0h IAA whole plant Original data GEO bulk
312 WT 24H Cold 0.50 >More info 0.08 >More info WT control Original data GEO bulk
313 Apex mir-3TCP 14DAS -0.58 >More info -0.00 >More info Apex Col 14DAS Original data GEO bulk
314 Laer Flg22 1h 0.53 >More info 0.04 >More info Laer Control leaf discs Original data GEO bulk
315 npr1 0.52 >More info 0.04 >More info WT(COL) Original data GEO bulk
316 Mutant arf2-6 -0.52 >More info -0.03 >More info Col Original data GEO bulk
317 Col-0 9 hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
318 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
319 ein2-1 9 hpi A. brassicicola 0.54 >More info -0.00 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
320 phr1 Root-Pi 0.52 >More info 0.02 >More info WT Root+Pi roots Original data GEO bulk
321 hai1-2 0.51 >More info 0.03 >More info control control whole seedlings Original data GEO bulk
322 essp3/brm5 mutant 0.50 >More info 0.04 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
323 grf1/grf2/grf3 0.50 >More info 0.03 >More info WS Original data GEO bulk
324 ARR22-ox (t-zeatin 3 h) 0.55 >More info -0.02 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
325 siliques AtHb1 control 0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
326 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
327 SA Treated -0.60 >More info 0.08 >More info Water Original data GEO bulk
328 2hr KCl control SR cell 0.53 >More info -0.02 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
329 Roots Cd -0.70 >More info 0.19 >More info Roots control Cd Root Original data GEO bulk
330 rdr1-1 -0.55 >More info 0.05 >More info Col-0 Original data GEO bulk
331 atmospheric CO2 low Mg root 0.52 >More info -0.02 >More info atmospheric CO2 normal Mg root Root Original data
332 Col-0 35S:MBS1 HL 3h -0.66 >More info 0.18 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
333 JA 24h -0.53 >More info 0.05 >More info EtOH 24h 24hr Original data GEO bulk
334 Nicotinamide-89hr 0.59 >More info -0.11 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
335 bri1-116 -0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
336 root - 04% oxygen - 30min -0.07 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
337 Nicotinamide-93hr 0.50 >More info -0.06 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
338 mkk1 control rep -0.52 >More info 0.11 >More info Col-0 Time 0 rep Original data GEO bulk
339 Laer GA 1h -0.53 >More info 0.12 >More info Laer Control leaf discs Original data GEO bulk
340 -Sulfate 24 h -0.25 >More info 0.66 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
341 bak1-3 untreated -0.50 >More info 0.10 >More info WT untreated untreated Original data GEO bulk
342 stn7-1 -0.50 >More info 0.12 >More info Col-0 rosette leaves Original data GEO bulk
343 pGL1::GL1-GR Dex 4 hours -0.54 >More info 0.17 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
344 spx1 spx2 resupplied Pi 4h -0.55 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
345 sex4-3 -0.52 >More info 0.24 >More info Col-WT leaves Original data GEO bulk
346 Col BTH -0.57 >More info 0.67 >More info Col rosettes Original data GEO bulk