4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root epidermis and lateral root cap 40 mM NaCl
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List of experiments correlated with "root epidermis and lateral root cap 40 mM NaCl"  Help Download transcriptome of top 30
Score Experiment Correlation from
root epidermis and lateral root cap 40 mM NaCl		 Correlation to
root epidermis and lateral root cap 40 mM NaCl		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root epidermis and lateral root cap 40 mM NaCl 1.00 >More info 1.00 >More info root epidermis and lateral root cap Original data GEO bulk
2 whole roots 140 mM NaCl 1 hour 0.65 >More info 0.75 >More info whole roots standard Original data GEO bulk
3 root stele 40 mM NaCls 0.73 >More info 0.67 >More info root stele Original data GEO bulk
4 root endodermis and quiescent center 40 mM NaCl 0.59 >More info 0.80 >More info root endodermis and quiescent center Original data GEO bulk
5 root columella root cap 40 mM NaCl 0.67 >More info 0.70 >More info root columella root cap Original data GEO bulk
6 NaCl Col 0.64 >More info 0.73 >More info Col Original data GEO bulk
7 root longitudinal zone-3 NaCl 0.61 >More info 0.73 >More info root longitudinal zone-3 Original data GEO bulk
8 whole roots 140 mM NaCl 30 minutes 0.62 >More info 0.69 >More info whole roots standard Original data GEO bulk
9 root cortex 40 mM NaCl 0.63 >More info 0.68 >More info root cortex Original data GEO bulk
10 root longitudinal zone-4 NaCl 0.54 >More info 0.75 >More info root longitudinal zone-4 Original data GEO bulk
11 root cells cortex 140mM NaCl 1 hour 0.63 >More info 0.63 >More info root cells cortex standard 1 hour root cells cortex Original data
12 root cells epidermis 140mM NaCl 1 hour 0.54 >More info 0.72 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 whole roots 140 mM NaCl 4 hour 0.58 >More info 0.66 >More info whole roots standard Original data GEO bulk
14 root cells stele 140mM NaCl 1 hour 0.62 >More info 0.61 >More info root cells stele standard 1 hour root cells stele Original data
15 6h +Pi -0.62 >More info -0.60 >More info 6h -Pi root Original data GEO bulk
16 root cells endodermis 140mM NaCl 1 hour 0.61 >More info 0.58 >More info root cells endodermis standard 1 hour root cells endodermis Original data
17 root longitudinal zone-1 NaCl 0.45 >More info 0.70 >More info root longitudinal zone-1 Original data GEO bulk
18 root longitudinal zone-2 NaCl 0.50 >More info 0.63 >More info root longitudinal zone-2 Original data GEO bulk
19 Osmotic Stress 24 h (root) 0.63 >More info 0.48 >More info Stress mock 24 h (root) Original data Stress treatments
20 low CO2 + light 0.47 >More info 0.63 >More info normal CO2 + light Original data GEO bulk
21 TNT-seedlings 0.32 >More info 0.77 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
22 WT 3H Cold 0.34 >More info 0.73 >More info WT control Original data GEO bulk
23 GA 120min 0.36 >More info 0.71 >More info CON120 GA 120 min. root tips Original data GEO bulk
24 OXUPB1-2 meristematic zone 0.60 >More info 0.46 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
25 root cells stele 140mM NaCl 3 hours 0.52 >More info 0.54 >More info root cells stele standard 1 hour root cells stele Original data
26 AgNO3 3 h 0.43 >More info 0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
27 root cells -Fe 0.52 >More info 0.53 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
28 2hr transitory KNO3 SR cell 0.41 >More info 0.63 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
29 Col0-PsmES4326-24hpi 0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
30 8hr-pH4.5 0.55 >More info 0.47 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
31 root cells endodermis 140mM NaCl 3 hours 0.52 >More info 0.50 >More info root cells endodermis standard 1 hour root cells endodermis Original data
32 Protoplast Induced 0.38 >More info 0.64 >More info Uninduced Original data GEO bulk
33 Whole root - low pH 48H -0.25 >More info -0.77 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
34 ABA 1 h 0.40 >More info 0.61 >More info Mock 1 h Original data Basic hormone treatment of seedlings
35 Leafminer damaged seedlings 0.45 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
36 toc1-1-53hr 0.40 >More info 0.60 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
37 WT (Col) glucose -0.39 >More info -0.60 >More info WT (Col) glucose seedlings Original data GEO bulk
38 aphid infested 0.37 >More info 0.62 >More info control aphid infested Leaves Original data GEO bulk
39 aphid infested 0.37 >More info 0.62 >More info CTR Original data GEO bulk
40 root protophloem 40 mM NaCl 0.47 >More info 0.51 >More info root protophloem Original data GEO bulk
41 24h +Pi -0.61 >More info -0.36 >More info 24h -Pi root Original data GEO bulk
42 siliques AtHb1 control 0.45 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
43 Salt Stress 24 h (root) 0.56 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
44 toc1-1-77hr 0.42 >More info 0.54 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
45 toc1-1-73hr 0.39 >More info 0.57 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
46 root cells epidermis 140mM NaCl 3 hours 0.42 >More info 0.54 >More info root cells epidermis standard 1 hour root cells epidermis Original data
47 Col-0 under 4 days salt 0.50 >More info 0.45 >More info Col-0 under control 4 days salt treatment rosette Original data
48 CMP 24hr 0.54 >More info 0.41 >More info Acetone 24hr root Original data GEO bulk
49 Kas2 roots 2hr KNO3 nitrogen 0.56 >More info 0.38 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
50 bak1-3 +Pep2 10h 0.51 >More info 0.43 >More info WT +Pep2 10h Pep2 Original data GEO bulk
51 Prohexadione 3 h 0.30 >More info 0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
52 root cells columella root cap -Fe 0.55 >More info 0.37 >More info whole roots standard Original data GEO bulk
53 dorn1-1 Root 100 mM ATP 30 min -0.40 >More info -0.52 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
54 ABA DFPM 0.51 >More info 0.41 >More info control Original data GEO bulk
55 WT AntimycinA 3h 0.51 >More info 0.41 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
56 HSP90 Reduced RNAi-A2 0.40 >More info 0.51 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
57 hira-root -0.50 >More info -0.41 >More info WT-root root Original data
58 Mutant axr3-1 (IAA) 0.38 >More info 0.52 >More info Col (IAA) Original data GEO bulk
59 root longitudinal zone-1 low sulfur -0.34 >More info -0.55 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
60 root cells cortex 140mM NaCl 3 hours 0.51 >More info 0.37 >More info root cells cortex standard 1 hour root cells cortex Original data
61 seedling h S Exp -0.37 >More info -0.51 >More info seedling -S Exp seedling Original data
62 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
63 WT 6H Cold 0.37 >More info 0.50 >More info WT control Original data GEO bulk
64 root cells cortex 140mM NaCl 8 hours 0.50 >More info 0.36 >More info root cells cortex standard 1 hour root cells cortex Original data
65 ABA JA 24h 0.28 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
66 roottip hypoxia total 0.32 >More info 0.53 >More info roottip control total Original data GEO bulk
67 RRE2 Chitin 0.52 >More info 0.32 >More info Chitin Original data GEO bulk
68 Col-0 flu HL 3h 0.52 >More info 0.31 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
69 rosette Dark Wounded 0.32 >More info 0.51 >More info rosette Dark Control Original data GEO bulk
70 4C 1h 0.29 >More info 0.54 >More info 4C 0h Original data GEO bulk
71 triploid female excess -0.12 >More info -0.71 >More info tetraploid Original data GEO bulk
72 RRE1 Chitin 0.51 >More info 0.31 >More info Chitin Original data GEO bulk
73 Heat shock optimum 0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 high R/FR 0.15 >More info 0.67 >More info low R/FR high R/FR (control) mock spray Original data GEO bulk
75 WT drought 0.32 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
76 6-trichlorophenoxyacetic acid 3 h 0.24 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
77 gpa1-4/agb1-2 ozone 2d -0.21 >More info -0.60 >More info Col ozone 2d ozone Original data GEO bulk
78 toc1-1-85hr 0.28 >More info 0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
79 tt4 UV 0.26 >More info 0.54 >More info UV aerial region Original data GEO bulk
80 Laer pretreat GA Flg22 1h 0.09 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 IAA7mII over-expressor IAA Treated 0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
82 shoot hypoxia pRBCS -0.18 >More info -0.60 >More info shoot hypoxia total Original data GEO bulk
83 RGA-GR-DEX 0.23 >More info 0.53 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
84 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
85 35S::MBF1c 0.25 >More info 0.51 >More info control Original data GEO bulk
86 pip3 At2g19270 TDNA 9 0.24 >More info 0.51 >More info Col-0 whole plant Original data GEO bulk
87 Apex mir-3TCP 14DAS -0.22 >More info -0.52 >More info Apex Col 14DAS Original data GEO bulk
88 ara1/2mut -0.20 >More info -0.50 >More info Col-3 Original data GEO bulk
89 Chemically 0.11 >More info 0.55 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
90 CeO2 germinant -0.10 >More info -0.56 >More info Millipore Water germinant CeO2 seedling Original data
91 shoot control p35S -0.04 >More info -0.61 >More info shoot control total Original data GEO bulk
92 tetraploid 0.14 >More info 0.51 >More info diploid Original data GEO bulk
93 P.p 30hai 0.51 >More info 0.13 >More info At-Control roots Original data GEO bulk
94 myb61 xylem -0.02 >More info 0.66 >More info wt xylem xylem Original data GEO bulk
95 opr3 JA 0.5 h 0.08 >More info 0.55 >More info opr3 0 h Original data GEO bulk
96 xyl-grown cell culture- 1h 1mM Suc -0.04 >More info -0.58 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
97 Cs shoot -0.03 >More info 0.61 >More info control shoot Original data GEO bulk
98 35S:MYB28 like miR 0.07 >More info 0.50 >More info WT for miR Original data GEO bulk
99 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
100 35S:RPS4 rrs1-11 T0 0.03 >More info 0.52 >More info 35S:RPS4 T0 leaves Original data
101 shoot hypoxia p35S -0.01 >More info -0.53 >More info shoot hypoxia total Original data GEO bulk
102 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
103 Cd 18h root -0.02 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
104 seed germinating in countinuous light 24h SL -0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
105 35S:ATR1 like miR -0.02 >More info 0.51 >More info WT for miR Original data GEO bulk
106 WT roots - Fe 0.26 >More info -0.60 >More info WT roots + Fe Roots Original data GEO bulk