4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on WT no Pi
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "WT no Pi"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT no Pi		 Correlation to
WT no Pi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT no Pi 1.00 >More info 1.00 >More info WT complete seedlings Original data
2 WT resupplied Pi 4h 0.83 >More info 0.86 >More info WT complete seedlings Original data
3 WT Shoot-Pi 0.77 >More info 0.82 >More info WT Shoot+Pi shoots Original data GEO bulk
4 WT Root-Pi 0.74 >More info 0.84 >More info WT Root+Pi roots Original data GEO bulk
5 WT 1wk -P 0.68 >More info 0.86 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
6 WT 1mM phosphate 8 hours. -0.67 >More info -0.86 >More info WT control (not supplemented). Original data
7 phr1 phl1 Shoot-Pi -0.69 >More info -0.75 >More info WT Shoot-Pi shoots Original data GEO bulk
8 phr1 Root-Pi 0.68 >More info 0.74 >More info WT Root+Pi roots Original data GEO bulk
9 oas-a1.1 Cd 24h 0.64 >More info 0.77 >More info Cd 24h root Shoot Original data GEO bulk
10 rosette Dark Wounded 0.58 >More info 0.82 >More info rosette Dark Control Original data GEO bulk
11 spx1 spx2 complete 0.66 >More info 0.71 >More info WT complete seedlings Original data
12 WT 30μM phosphate 8 hours. -0.57 >More info -0.79 >More info WT control (not supplemented). Original data
13 rosette Light Wounded 0.56 >More info 0.79 >More info rosette Light Control Original data GEO bulk
14 pho1 0.59 >More info 0.75 >More info Col2WT Original data GEO bulk
15 Cycloheximide 3 h 0.68 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
16 FLIGHT TAGESB plate6 ROOTS 0.52 >More info 0.79 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
17 WT 6H Cold 0.57 >More info 0.73 >More info WT control Original data GEO bulk
18 Methyl Jasmonate 1 h 0.57 >More info 0.73 >More info Mock 1 h Original data Basic hormone treatment of seedlings
19 chito-octamer 0.57 >More info 0.72 >More info Col Mock Original data GEO bulk
20 HopZ1a treated 0.58 >More info 0.71 >More info col Original data GEO bulk
21 seedling 12h after HZE WT 0.56 >More info 0.70 >More info seedling day 1 unirradiated WT 12h Original data
22 WT+chitooctaose 0.49 >More info 0.77 >More info WT+water chitooctaose seedlings Original data GEO bulk
23 leaf13 0.54 >More info 0.71 >More info unwounded leaves none Original data GEO bulk
24 Cor 10h 0.56 >More info 0.68 >More info Mock 10h Cor Original data GEO bulk
25 col-5 DC3000 12h 0.53 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
26 Laer Flg22+GA 1h 0.56 >More info 0.66 >More info Laer Control leaf discs Original data GEO bulk
27 B.cinerea 18 h infection 0.56 >More info 0.66 >More info Mock 18 h Original data Botrytis cinerea infection
28 Botrytis cinerea 18h 0.56 >More info 0.66 >More info control 18h Original data GEO bulk
29 HopZ1a treated ulp1c ulp1d 0.53 >More info 0.69 >More info col Original data GEO bulk
30 Col-Luc WT 3h antimycin A 0.57 >More info 0.65 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
31 stn7-1 -0.57 >More info -0.64 >More info Col-0 rosette leaves Original data GEO bulk
32 AFB1 flg22 2h 0.58 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
33 Laer Flg22 2h 0.54 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
34 DC3000 24h 0.55 >More info 0.66 >More info Mock 24h DC3000 Original data GEO bulk
35 Leafminer locally damaged thaliana seedlings 0.55 >More info 0.65 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
36 Botrytis cinerea 48h 0.56 >More info 0.64 >More info control 48h Original data GEO bulk
37 Wounding Stress3 h (shoot) 0.53 >More info 0.67 >More info Stress mock 3 h (shoot) Original data Stress treatments
38 col-5 hrpA 12h 0.50 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
39 Laer Flg22 1h 0.52 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
40 Transgenic LEC2GR Seedling 1h Dex 0.52 >More info 0.67 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
41 Rsch 8h 0.46 >More info 0.73 >More info Rsch CA Leaves Original data
42 WT in -N 0.55 >More info 0.63 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
43 flu over-tAPX 0.52 >More info 0.66 >More info WT Col Original data GEO bulk
44 Leaf wounded 0.37 >More info 0.81 >More info Leaf control vegetative leaf Original data GEO bulk
45 WT flg22 2h 0.59 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
46 chito-tetramer 0.49 >More info 0.69 >More info Col Mock Original data GEO bulk
47 Pto inoculated 0.52 >More info 0.65 >More info col Original data GEO bulk
48 Cold Stress 24 h (shoot) 0.52 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
49 seedlings protease IV 0.49 >More info 0.68 >More info seedlings nontreated control whole seedling Original data
50 Laer Flg22+GA 2h 0.54 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
51 col-5 DC3000-avrRpm 4h 0.52 >More info 0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
52 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.63 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
53 WT-Dry 0.42 >More info 0.74 >More info WT-CK dehydration treatment 1h Original data
54 Col-0 WT HL 3h 0.52 >More info 0.63 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
55 Col-0 under 4 days salt 0.56 >More info 0.59 >More info Col-0 under control 4 days salt treatment rosette Original data
56 ein2-1 9 hpi A. brassicicola 0.53 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
57 cpr5npr1svi1 0.52 >More info 0.63 >More info WT(COL) Original data GEO bulk
58 phr1 phl1 Root-Pi 0.52 >More info 0.63 >More info WT Shoot+Pi roots Original data GEO bulk
59 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
60 Shoot -K 0.51 >More info 0.64 >More info Control-shoot Original data GEO bulk
61 K starvation (shoot) 0.51 >More info 0.64 >More info Ws (shoot) Original data GEO bulk
62 phr1 Shoot-Pi -0.49 >More info -0.66 >More info WT Root-Pi shoots Original data GEO bulk
63 DC3000 7h 0.49 >More info 0.66 >More info Mock 7h DC3000 Original data GEO bulk
64 myb61 xylem 0.43 >More info 0.72 >More info wt xylem xylem Original data GEO bulk
65 Osmotic Stress 24 h (shoot) 0.51 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
66 WT Col-0 Bgh inoculated 0.53 >More info 0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
67 Laer pretreat GA Flg22 1h 0.43 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
68 bHLH122 ox -0.44 >More info -0.70 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
69 Salt Stress 24 h (shoot) 0.52 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
70 AvrRpt2 Col-0 6hpi 0.57 >More info 0.56 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
71 Col-0-1h IAA 0.60 >More info 0.53 >More info Col-0-0h IAA whole plant Original data GEO bulk
72 anac017-2 AntimycinA 3h -0.50 >More info -0.63 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
73 hrcC 0.50 >More info 0.63 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
74 seedling 6h after HZE WT 0.52 >More info 0.60 >More info seedling day 1 unirradiated WT 6h Original data
75 WT NAA/flg 1h 0.51 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
76 seedling 12h after HZE atm-1 0.52 >More info 0.60 >More info seedling day 1 unirradiated atm-1 12h Original data
77 mpk6-ko Flg22 4h 0.48 >More info 0.64 >More info mpk6-ko H2O 4h Original data GEO bulk
78 WT flg22 1h 0.47 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
79 hrpA fliC 7h 0.48 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
80 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.46 >More info 0.66 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
81 Col 8h 0.49 >More info 0.63 >More info Col CA Leaves Original data
82 seedlings-week-old RECA1-overexpressing
transgenic		 0.49 >More info 0.63 >More info seedlings-week-old Col-0 seedlings Original data
83 Leafminer damaged seedlings 0.55 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
84 WT 3H Cold 0.34 >More info 0.77 >More info WT control Original data GEO bulk
85 Laer pretreat JA Flg22 1h 0.54 >More info 0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
86 flu 0.52 >More info 0.59 >More info WT Col Original data GEO bulk
87 gh3.5-1D 48 hpi 0.53 >More info 0.58 >More info Col-0 uninoculated Original data GEO bulk
88 ulp1c ulp1d +Pto 0.50 >More info 0.61 >More info ulp1c ulp1d mock Original data GEO bulk
89 low water potential 0.51 >More info 0.60 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
90 ein5-1 ski2-3 0.49 >More info 0.62 >More info Col-0 aerial tissue Original data
91 WT chitooctaose 0.47 >More info 0.64 >More info WT water Original data GEO bulk
92 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
93 Cor hrpS 10h 0.57 >More info 0.53 >More info Mock 10h Cor hrpS Original data GEO bulk
94 Sulfometuron EC50 0.55 >More info 0.55 >More info Carrier Original data GEO bulk
95 Phaseolicola 2 h (leaf) 0.44 >More info 0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
96 miR393 flg22 2h 0.46 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
97 Shoot -P 0.28 >More info 0.82 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
98 SLWF infested 0.44 >More info 0.66 >More info SLWF uninfested rosette tissue Original data GEO bulk
99 Pst-DC3000(avrRpm1)-4hpi 0.46 >More info 0.64 >More info Pst-DC3000-4hpi Original data GEO bulk
100 WT cold 0.54 >More info 0.55 >More info WT control All aerial tissue Original data GEO bulk
101 35S::ERF104 Flg22 4h 0.44 >More info 0.65 >More info 35S::ERF104 H2O 4h Original data GEO bulk
102 miR393 flg22 1h 0.44 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
103 hrpA 7h 0.45 >More info 0.64 >More info Mock 7h hrpA Original data GEO bulk
104 Col-0 9 hpi A. brassicicola 0.49 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
105 short 8-degree- 0.50 >More info 0.58 >More info control short Original data GEO bulk
106 col 24h4c set4 0.51 >More info 0.57 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
107 AFB1 flg22 1h 0.43 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
108 Cd 24h root -0.49 >More info -0.59 >More info WT-Untreated Shoot Original data GEO bulk
109 35S:VND7-VP16-GR+CHX 0.44 >More info 0.64 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
110 Seedling KUA1-IOX est 0.37 >More info 0.71 >More info Seedling KUA1-IOX mock Original data
111 IRP1-OE-Ctrl--root 0.45 >More info 0.63 >More info COL-0-Ctrl--root root Original data
112 35S::KLU 0.43 >More info 0.65 >More info WT Shoot Original data
113 sid2-2 9 hpi A. brassicicola 0.51 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
114 Selenate (root) 0.46 >More info 0.61 >More info Ws (root) Original data GEO bulk
115 short 12-degree- 0.45 >More info 0.62 >More info control short Original data GEO bulk
116 npr1-3 MOCK 48h -0.40 >More info -0.67 >More info Col-0 MOCK 48h Original data GEO bulk
117 Root Selenate 0.46 >More info 0.61 >More info Root control 40 micromolar selenate Root Original data GEO bulk
118 GST NPP1 4 h (leaf) 0.48 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
119 Mutant gh3.5-1D (AvrRpt2) 0.48 >More info 0.59 >More info Col-0 (AvrRpt2) Original data GEO bulk
120 bZIP1ko mutant N+Light- 0.48 >More info 0.59 >More info WT-sib N+Light- whole plant Original data GEO bulk
121 35S:RPS4 eds1-2 2h -0.37 >More info -0.70 >More info 35S:RPS4 2h leaves Original data
122 Col-0-3h IAA 0.60 >More info 0.46 >More info Col-0-0h IAA whole plant Original data GEO bulk
123 WT-NOCO2 INFECTED 0.46 >More info 0.60 >More info WT-MOCK Original data GEO bulk
124 tt4 -0.47 >More info -0.59 >More info WT aerial region Original data GEO bulk
125 WT +elf18 10h 0.49 >More info 0.57 >More info WT untreated elf18 Original data GEO bulk
126 rli 0.50 >More info 0.55 >More info WT whole plant Original data GEO bulk
127 D2O 0.48 >More info 0.57 >More info H2O seedling Original data GEO bulk
128 pepr1-1 Pepr2-3 +Pep2 2h -0.48 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
129 max4 hypocotyl 0.48 >More info 0.57 >More info wt hypocotyl hypocotyl Original data GEO bulk
130 npr1-1 SA -0.52 >More info -0.52 >More info Col-0 SA complete seedling Original data
131 9 hr Hypoxia 1 hr recovery IP RNA 0.60 >More info 0.44 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
132 21h-DC3000 avrRpm1 -0.40 >More info -0.64 >More info 21h-DC3000 leaves Original data GEO bulk
133 WT AntimycinA 3h 0.47 >More info 0.57 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
134 current injection 0.35 >More info 0.69 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
135 Col-0-30min IAA 0.53 >More info 0.50 >More info Col-0-0h IAA whole plant Original data GEO bulk
136 short 17-degree- 0.44 >More info 0.59 >More info control short Original data GEO bulk
137 dor drought 0.35 >More info 0.68 >More info WT drought Original data GEO bulk
138 Col-0-avrB-6h 0.45 >More info 0.58 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
139 WT cold 12 h 0.42 >More info 0.61 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
140 WT 24h cold 0.46 >More info 0.57 >More info WT warm 24h cold entire aerial part Original data GEO bulk
141 AtLysM RLK1 mutant chitooctaose -0.42 >More info -0.61 >More info WT chitooctaose Original data GEO bulk
142 Glyphosate EC50 0.41 >More info 0.62 >More info Carrier (Glyphosate) Original data GEO bulk
143 35S:RPS4 eds1-2 24h -0.49 >More info -0.54 >More info 35S:RPS4 24h leaves Original data
144 short 10-degree- 0.50 >More info 0.52 >More info control short Original data GEO bulk
145 cpr5scv1 0.50 >More info 0.52 >More info WT(COL) Original data GEO bulk
146 grf1/grf2/grf3 0.53 >More info 0.49 >More info WS Original data GEO bulk
147 Fenclorim 4hr 0.46 >More info 0.56 >More info Acetone 4hr root Original data GEO bulk
148 GA 0.44 >More info 0.58 >More info none GA Rosette Original data GEO bulk
149 WT 24H Cold 0.44 >More info 0.58 >More info WT control Original data GEO bulk
150 12h Col-0 0.42 >More info 0.60 >More info 00h Col-0 Original data GEO bulk
151 CDB1-Knockout -0.39 >More info -0.63 >More info WT Original data GEO bulk
152 pvip1 pvip2 0.42 >More info 0.59 >More info Col-0 whole rosettes Original data GEO bulk
153 Col-0 +ABA LF 0.45 >More info 0.56 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
154 myb61 cork 0.37 >More info 0.64 >More info wt cork cork Original data GEO bulk
155 35S:RPS4 eds1-2 8h -0.47 >More info -0.54 >More info 35S:RPS4 8h leaves Original data
156 aox1a:rpoTmp MLD stressed -0.43 >More info -0.58 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
157 Primisulfuron EC50 0.50 >More info 0.50 >More info Carrier (primisulfuron) Original data GEO bulk
158 ws 24h4c q8ws 0.55 >More info 0.45 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
159 Bur-0-3h IAA 0.54 >More info 0.46 >More info Bur-0h IAA whole plant Original data GEO bulk
160 ARR22-ox (t-zeatin 3 h) 0.53 >More info 0.47 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
161 CMV-WT 0.43 >More info 0.57 >More info Mock-At Aerial tissues Original data GEO bulk
162 WT cold 24h 0.33 >More info 0.67 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
163 WT powdery mildew 0.48 >More info 0.52 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
164 pab polysome 0.35 >More info 0.65 >More info WT polysome seedling shoot/aerial seedling Original data
165 Laer pretreat GA+JA Flg22 1h 0.52 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
166 Flagellin 4 h (leaf) 0.41 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
167 wt systemic wounding 0.39 >More info 0.60 >More info wt control leaves Original data GEO bulk
168 35:SUB1C 0.39 >More info 0.60 >More info WT whole seedling Original data GEO bulk
169 Kas-1 -Fe 24h -0.31 >More info -0.68 >More info Kas-1 +Fe 24h roots Original data GEO bulk
170 Kas -Fe 24h Roots -0.31 >More info -0.68 >More info Kas +Fe 24h Roots Original data GEO bulk
171 seedling 6h after HZE atm-1 0.44 >More info 0.55 >More info seedling day 1 unirradiated atm-1 6h Original data
172 erf104-ko Flg22 4h 0.41 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
173 Fenclorim 24hr 0.44 >More info 0.54 >More info Acetone 24hr root Original data GEO bulk
174 CabpBVR2 0.40 >More info 0.58 >More info WT Original data GEO bulk
175 Methyl Jasmonate 0.5 h 0.35 >More info 0.62 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
176 Col whole leaf 5dpi 0.43 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
177 bak1-3 +Pep2 10h 0.39 >More info 0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
178 Col 1d 0.45 >More info 0.52 >More info Col CA Leaves Original data
179 Root -P 0.28 >More info 0.68 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
180 nia1nia2 0.50 >More info 0.46 >More info Col-0 whole seedlings Original data GEO bulk
181 npr1 sni1 brca2a SA -0.45 >More info -0.51 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
182 msh1 albino 0.43 >More info 0.53 >More info WT aerial part Original data GEO bulk
183 16h Col-0 0.39 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
184 psad1-1 stn7-1 -0.50 >More info -0.45 >More info Col-0 rosette leaves Original data GEO bulk
185 Te ozone 0.50 >More info 0.45 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
186 Laer pretreat JA Flg22 2h 0.54 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
187 35S-MIF1 dark grown 0.41 >More info 0.54 >More info Dark-grown WT control Original data GEO bulk
188 SHR-GR Time 1H Dex 0.41 >More info 0.54 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
189 M6PR transgenic leaf 100mM NaCl -0.34 >More info -0.61 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
190 Bur-0-30min IAA 0.45 >More info 0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
191 12m.KCl 0.33 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
192 Leaf systemic 0.31 >More info 0.64 >More info Leaf control vegetative leaf Original data GEO bulk
193 E.coli 0157 H7 7h 0.34 >More info 0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
194 Shoot -Cs 0.31 >More info 0.64 >More info Control-shoot Original data GEO bulk
195 IRP1-OE-Fe--shoot 0.35 >More info 0.60 >More info COL-0-Fe--shoot shoot Original data
196 DFPM 0.40 >More info 0.54 >More info control Original data GEO bulk
197 Te 8h 0.38 >More info 0.56 >More info Te CA Leaves Original data
198 DC3000 2 h (leaf) 0.35 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
199 WT NAA/flg 2h 0.43 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
200 ice1 control 0.43 >More info 0.51 >More info WT control Original data GEO bulk
201 Root P recovery -0.25 >More info -0.69 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
202 WT drought 0.41 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
203 Dex-rga(delta17) 4h GA4+DEX -0.43 >More info -0.51 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
204 Laer pretreat GA Flg22 0h 0.55 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
205 opr3 JA 2 h 0.27 >More info 0.66 >More info opr3 0 h Original data GEO bulk
206 ISOXABEN -0.38 >More info -0.55 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
207 HARAP aerobic -0.23 >More info -0.70 >More info WT aerobic aerobic Original data GEO bulk
208 E.coli TUV86 2 fliC 7h 0.36 >More info 0.57 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
209 4C 2h(SOIL) 0.23 >More info 0.70 >More info 4C 0h(SOIL) Original data GEO bulk
210 cpr5 0.41 >More info 0.52 >More info WT(COL) Original data GEO bulk
211 Col whole leaf 7dpi 0.38 >More info 0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
212 Col in Pi deficiency medium 0.26 >More info 0.66 >More info Col in control medium root Original data GEO bulk
213 naxillin 3h 0.40 >More info 0.52 >More info before treatment naxillin root Original data GEO bulk
214 abi1 hypocotyl 0.38 >More info 0.54 >More info Ler hypocotyl hypocotyl Original data GEO bulk
215 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.51 >More info 0.41 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
216 GST 4 h (leaf) 0.33 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
217 Mutant arf19-1 0.32 >More info 0.60 >More info Col Original data GEO bulk
218 rosette leaves fdh 0.35 >More info 0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
219 20m.KCl 0.30 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
220 CLO 4mM 0.42 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
221 24h volatiles Sm. R3089 -0.42 >More info -0.50 >More info 24h untreated whole seedling Original data GEO bulk
222 camta1 leaf drought -0.42 >More info -0.50 >More info Col-0 leaf drought leaf Original data GEO bulk
223 Dex-rga(delta17) 2h GA4+DEX -0.41 >More info -0.51 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
224 rosettes atx drought 0.39 >More info 0.52 >More info rosettes atx watered Original data GEO bulk
225 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
226 ABA DFPM 0.35 >More info 0.56 >More info control Original data GEO bulk
227 Rsch 1d 0.40 >More info 0.51 >More info Rsch CA Leaves Original data
228 NAA -AA 0.36 >More info 0.55 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
229 gpa1 -ABA GC -0.29 >More info -0.62 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
230 35:SUB1A 0.41 >More info 0.50 >More info WT whole seedling Original data GEO bulk
231 root - 04% oxygen - 48h -0.40 >More info -0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
232 Light 0.40 >More info 0.50 >More info Control Original data GEO bulk
233 WT +elf18 2h 0.39 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
234 cpr5npr1 0.39 >More info 0.51 >More info WT(COL) Original data GEO bulk
235 aba1 hypocotyl 0.38 >More info 0.52 >More info Ler hypocotyl hypocotyl Original data GEO bulk
236 21h-DC3000 hrpA -0.31 >More info -0.59 >More info 21h-DC3000 leaves Original data GEO bulk
237 phyABDE 4-day dark- 2 hours Rc50 0.18 >More info 0.72 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
238 opr3 JA 0.5 h 0.20 >More info 0.70 >More info opr3 0 h Original data GEO bulk
239 Hydrogen Peroxide 500 uM 0.33 >More info 0.56 >More info Control RB and PER Hydrogen Peroxide Original data
240 PAHs stress 0.35 >More info 0.54 >More info exp control phenanthrene whole plants Original data GEO bulk
241 IRP1-OE-Fe--root 0.36 >More info 0.53 >More info COL-0-Fe--root root Original data
242 sdg2 0.50 >More info 0.38 >More info wt seedling Original data GEO bulk
243 Prohexadione 3 h 0.22 >More info 0.66 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
244 amiR-tor induced 6d 0.36 >More info 0.52 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
245 WT 2-4h Xanthomonas 0.36 >More info 0.52 >More info WT T0 Original data GEO bulk
246 Split KNO3 roots - 2days -0.31 >More info -0.57 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
247 Elevated CO2 AMPLE N NIGHT 0.31 >More info 0.57 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
248 seedling 12h after Gamma atm-1 0.33 >More info 0.54 >More info seedling day 1 unirradiated atm-1 12h Original data
249 WT +Pep2 2h 0.52 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
250 1h +Pi -0.28 >More info -0.59 >More info 1h -Pi root Original data GEO bulk
251 20h Col-0 0.29 >More info 0.58 >More info 00h Col-0 Original data GEO bulk
252 OxPHR1 -Pi-DEX-CHX 0.30 >More info 0.56 >More info phr1 -Pi-DEX-CHX Original data GEO bulk
253 GiantCell Root -0.33 >More info -0.53 >More info Control Root laser captured giant cells Original data GEO bulk
254 Whole root - S 3H 0.30 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
255 OE-HRA1 2HS  0.33 >More info 0.53 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
256 Protoplast Induced 0.27 >More info 0.59 >More info Uninduced Original data GEO bulk
257 Methyl Jasmonate 3 h 0.31 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
258 iron minus 24h -0.18 >More info -0.67 >More info iron +24h root Original data GEO bulk
259 agb1 gpa1 -ABA LF 0.19 >More info 0.66 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
260 Dry late day 0.31 >More info 0.54 >More info Wet late day water-limited whole rosette Original data GEO bulk
261 aerial organ callus inducing medium 96 h 0.32 >More info 0.53 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
262 08h Col-0 0.34 >More info 0.51 >More info 00h Col-0 Original data GEO bulk
263 Light 3day wt -0.28 >More info -0.57 >More info 0h wt Original data
264 ckh1 CK200 0.32 >More info 0.52 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
265 aerial organ callus inducing medium 48 h 0.32 >More info 0.52 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
266 Inflorescences Trp1 -0.32 >More info -0.52 >More info Inflorescences ler inflorescences Original data GEO bulk
267 35S:RPS4 rrs1-11 T0 0.29 >More info 0.55 >More info 35S:RPS4 T0 leaves Original data
268 coi1-PsmES4326-24hpi -0.33 >More info -0.50 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
269 JA 3h 0.16 >More info 0.67 >More info EtOH 3h 3hr Original data GEO bulk
270 efr-1 +elf18 10h -0.31 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
271 IAA7mII over-expressor IAA Treated 0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
272 toc1-1-85hr -0.14 >More info -0.69 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
273 upf3 0.32 >More info 0.50 >More info WT whole plant Original data GEO bulk
274 tunicamycin -0.27 >More info -0.54 >More info DMF Original data GEO bulk
275 del1-1 mutant 5d uninfected 0.30 >More info 0.51 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
276 TA induced 0.24 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
277 MYB46-GR DEX 0.24 >More info 0.56 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
278 Dry pre-dawn 0.27 >More info 0.53 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
279 Col ozone 3h 0.24 >More info 0.56 >More info Col clean-air 3h ozone Original data GEO bulk
280 estradiole-induced ANAC059 0.21 >More info 0.59 >More info transgenic (empty vector inducible system) Original data GEO bulk
281 AvrRpm1 2 h (leaf) 0.25 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
282 long 17-degree- 0.29 >More info 0.50 >More info control long Original data GEO bulk
283 Split KNO3 roots - 2hours -0.18 >More info -0.61 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
284 vtc1-1 -0.22 >More info -0.57 >More info Col-0 whole plant Original data GEO bulk
285 2hr continuous KNO3 and MSX and Gln PeR cell -0.21 >More info -0.58 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
286 Control KNO3 roots - 8hours -0.26 >More info -0.52 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
287 Col ozone 2d 0.26 >More info 0.52 >More info Col clean-air 2d ozone Original data GEO bulk
288 dark +H2O2 -0.22 >More info -0.56 >More info dark 5 mM H2O2 seedling Original data GEO bulk
289 sfr3 control 0.26 >More info 0.51 >More info WT control All aerial tissue Original data GEO bulk
290 seedling 12h after Gamma WT 0.26 >More info 0.51 >More info seedling day 1 unirradiated WT 12h Original data
291 9 hr Hypoxia 1 hr recovery Total RNA 0.54 >More info 0.22 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
292 mdh 0.26 >More info 0.50 >More info Col Original data GEO bulk
293 6-trichlorophenoxyacetic acid 3 h 0.20 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
294 Mutant bri1 -0.25 >More info -0.50 >More info Ws-2 Original data Comparison of plant hormone related mutant
295 Mutant arf2 (etiol) 0.25 >More info 0.50 >More info Col (etiol) Original data GEO bulk
296 arf2 mock 0.25 >More info 0.50 >More info Col mock Original data GEO bulk
297 WT-16ºC 0.17 >More info 0.58 >More info WT-23ºC Original data GEO bulk
298 GO5; 8h switch to ambient CO2 concentrations; 0.23 >More info 0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
299 ex2 flu dark 8hours/30 minute light 0.09 >More info 0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
300 rdr6-15 -0.13 >More info -0.60 >More info Col-0 plant inflorescence Original data
301 root - 04% oxygen - 2h -0.17 >More info -0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
302 IXB induced 0.19 >More info 0.53 >More info Methanol IXB Suspension cells Original data GEO bulk
303 HRE1-RNAi20 hypoxia 6 hrs 0.22 >More info 0.50 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
304 opr3 OPDA 2 h 0.00 >More info 0.72 >More info opr3 0 h Original data GEO bulk
305 ABA 1 h 0.15 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
306 Blue Light 45 min 0.13 >More info 0.57 >More info White Light 45min Original data Light treatments
307 siliques AtHb1 control 0.17 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
308 gpa1 +ABA GC -0.18 >More info -0.51 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
309 root epidermis and lateral root cap -S -0.19 >More info -0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
310 pab nonpolysome 0.18 >More info 0.51 >More info WT nonpolysome seedling shoot/aerial seedling Original data
311 35S::CBF2 0.13 >More info 0.55 >More info Ws2 Original data GEO bulk
312 Col BTH 0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
313 Imbibed 1 h (seed) 0.07 >More info 0.61 >More info Dry seed Original data Time course of early seed germination
314 PBZ 0.15 >More info 0.51 >More info none PBZ Rosette Original data GEO bulk
315 Polysomal RNA 35S:AtCSP1-FH1 0.12 >More info 0.53 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
316 4C 1h 0.10 >More info 0.55 >More info 4C 0h Original data GEO bulk
317 CeO2 germinant -0.14 >More info -0.51 >More info Millipore Water germinant CeO2 seedling Original data
318 opr3 OPDA 0.5 h 0.13 >More info 0.51 >More info opr3 0 h Original data GEO bulk
319 flu dark 8hours/30 minute light 0.01 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
320 toc1-1-89hr -0.13 >More info -0.50 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
321 Split KNO3 roots - 8hours -0.08 >More info -0.54 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
322 ABA JA 24h 0.05 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
323 amiRAP hypoxic -0.06 >More info -0.53 >More info hypoxic hypoxia Original data GEO bulk
324 ABA SA 24h -0.07 >More info 0.65 >More info EtOH 24h 24hr Original data GEO bulk
325 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
326 JA 24h 0.02 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
327 rosette leaves bdg 0.01 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
328 DUO1 induced 6h -0.04 >More info -0.52 >More info 6hr-not-induced whole plant Original data GEO bulk
329 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
330 OE WRKY63.3 high light 0.04 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
331 6h volatiles Sp. HRO-C48 0.02 >More info 0.51 >More info 6h untreated whole seedling Original data GEO bulk
332 ex1 flu dark 8hours/30 minute light -0.04 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
333 bri1-116 -0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
334 control leaf (cmt 5d) -0.10 >More info 0.55 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
335 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
336 ptpks2 -0.14 >More info 0.57 >More info Col-WT leaves Original data GEO bulk
337 ABA 24h -0.08 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
338 P.syringae vir 4 h (leaf) 0.23 >More info -0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
339 seedling -S Exp 0.60 >More info -0.19 >More info seedling FN Exp seedling Original data
340 cpctry 0.11 >More info -0.50 >More info Col Original data GEO bulk
341 P. infestans 6 h (leaf) 0.52 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments