4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 48 hpi
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List of experiments correlated with "Col-0 48 hpi"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 48 hpi		 Correlation to
Col-0 48 hpi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 48 hpi 1.00 >More info 1.00 >More info Col-0 uninoculated Original data GEO bulk
2 gh3.5-1D 48 hpi 0.88 >More info 0.84 >More info Col-0 uninoculated Original data GEO bulk
3 gh3.5D uninoculated -0.84 >More info -0.85 >More info Col-0 48 hpi Original data GEO bulk
4 del1-1 mutant 5d uninfected 0.75 >More info 0.90 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
5 RPL18 TuMV inoculated total RNA 0.81 >More info 0.81 >More info mock inoculated total RNA PO Original data GEO bulk
6 S58-2 0.79 >More info 0.81 >More info wt Original data GEO bulk
7 RPL18 TuMV inoculated polysomal RNA 0.81 >More info 0.78 >More info mock inoculated polysomal RNA PO Original data GEO bulk
8 Elevated CO2 AMPLE N DAY 0.79 >More info 0.80 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
9 cpr5 0.77 >More info 0.81 >More info WT(COL) Original data GEO bulk
10 cpr5scv1 0.75 >More info 0.82 >More info WT(COL) Original data GEO bulk
11 Col ozone 2d 0.76 >More info 0.80 >More info Col clean-air 2d ozone Original data GEO bulk
12 abi4 vtc2 (I) 0.77 >More info 0.79 >More info Col (I) rosette Original data GEO bulk
13 SLWF infested 0.78 >More info 0.78 >More info SLWF uninfested rosette tissue Original data GEO bulk
14 cpr5npr1 0.76 >More info 0.78 >More info WT(COL) Original data GEO bulk
15 CMV-WT 0.75 >More info 0.77 >More info Mock-At Aerial tissues Original data GEO bulk
16 vtc2 (I) 0.72 >More info 0.80 >More info Col (I) rosette Original data GEO bulk
17 sni1 0.68 >More info 0.83 >More info WT Original data GEO bulk
18 35S:RPS4 eds1-2 24h -0.75 >More info -0.74 >More info 35S:RPS4 24h leaves Original data
19 cpr5npr1svi1 0.70 >More info 0.79 >More info WT(COL) Original data GEO bulk
20 OH1 0.74 >More info 0.75 >More info Col-0 leaves Original data GEO bulk
21 pvip1 pvip2 0.75 >More info 0.74 >More info Col-0 whole rosettes Original data GEO bulk
22 smg7b-1 0.73 >More info 0.75 >More info WT whole plant Original data GEO bulk
23 S15-118 0.71 >More info 0.77 >More info wt Original data GEO bulk
24 mkk1/mkk2 control rep 0.74 >More info 0.74 >More info Col-0 Time 0 rep Original data GEO bulk
25 Col whole leaf 7dpi 0.68 >More info 0.78 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
26 ceh1 mutant 0.71 >More info 0.75 >More info Parent line Original data
27 UV Stress 24 h (shoot) 0.66 >More info 0.80 >More info Stress mock 24 h (shoot) Original data Stress treatments
28 cpr5 0.71 >More info 0.75 >More info WT seedling Original data GEO bulk
29 Col whole leaf 5dpi 0.69 >More info 0.77 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
30 IMI 4mM 0.68 >More info 0.78 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
31 aba3-1 0.70 >More info 0.73 >More info wt Original data GEO bulk
32 pmr5 pmr6 0.71 >More info 0.71 >More info Col-0 Original data GEO bulk
33 eds16 whole leaf 5dpi -0.67 >More info -0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
34 WT powdery mildew 0.64 >More info 0.78 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
35 mkk1/mkk2 24h BTH rep 0.72 >More info 0.70 >More info Col-0 24h BTH rep Original data GEO bulk
36 SA 4mM 0.74 >More info 0.68 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
37 ice1 6H Cold 0.67 >More info 0.74 >More info WT 6H Cold Original data GEO bulk
38 Col whole leaf amplified 5 dpi 0.68 >More info 0.73 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
39 abi4-102 (I) 0.71 >More info 0.70 >More info Col (I) rosette Original data GEO bulk
40 Col BTH 0.73 >More info 0.67 >More info Col rosettes Original data GEO bulk
41 sid2 -0.64 >More info -0.75 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
42 Shoot -Cs 0.68 >More info 0.71 >More info Control-shoot Original data GEO bulk
43 upf3 0.73 >More info 0.65 >More info WT whole plant Original data GEO bulk
44 treated group 0.67 >More info 0.70 >More info Control group Original data
45 cs26 short-day -0.66 >More info -0.71 >More info Leaves-WT-SD leaf Original data GEO bulk
46 Shoot -K 0.66 >More info 0.71 >More info Control-shoot Original data GEO bulk
47 K starvation (shoot) 0.66 >More info 0.71 >More info Ws (shoot) Original data GEO bulk
48 ice1 control 0.64 >More info 0.72 >More info WT control Original data GEO bulk
49 Col-0 INA 48h 0.63 >More info 0.73 >More info Col-0 MOCK 48h Original data GEO bulk
50 edr1 18 h powdery mildew 0.60 >More info 0.76 >More info Col-0 18 h powdery mildew Original data GEO bulk
51 12h-DC3000 avrRpm1 0.61 >More info 0.74 >More info 12h-DC3000 leaves Original data GEO bulk
52 CLO 4mM 0.73 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
53 Col-0 INA 6d 0.63 >More info 0.71 >More info Col-0 MOCK 6d Original data GEO bulk
54 PAHs stress 0.69 >More info 0.65 >More info exp control phenanthrene whole plants Original data GEO bulk
55 dor drought 0.60 >More info 0.73 >More info WT drought Original data GEO bulk
56 IRP1-OE-Fe--shoot 0.69 >More info 0.64 >More info COL-0-Fe--shoot shoot Original data
57 HopZ1a treated 0.66 >More info 0.66 >More info col Original data GEO bulk
58 Leafminer locally damaged thaliana seedlings 0.70 >More info 0.61 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
59 rosette leaves fdh 0.65 >More info 0.66 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
60 WT +elf18 10h 0.65 >More info 0.66 >More info WT untreated elf18 Original data GEO bulk
61 WT cold 0.63 >More info 0.68 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
62 vte2-1 3d vernalization 0.68 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
63 Cor hrpS 10h 0.61 >More info 0.70 >More info Mock 10h Cor hrpS Original data GEO bulk
64 Flagellin 4 h (leaf) 0.64 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
65 camta3-2 0.56 >More info 0.74 >More info WT Original data GEO bulk
66 HopZ1a treated ulp1c ulp1d 0.67 >More info 0.63 >More info col Original data GEO bulk
67 seedlings-week-old RECA1-overexpressing
transgenic		 0.65 >More info 0.65 >More info seedlings-week-old Col-0 seedlings Original data
68 Elevated CO2 AMPLE N NIGHT 0.59 >More info 0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
69 smg5-2 0.70 >More info 0.60 >More info WT whole plant Original data GEO bulk
70 Mutant siz1-3 0.60 >More info 0.70 >More info Col-0 Original data GEO bulk
71 siz1-3 control 0.60 >More info 0.70 >More info Col-0 control Original data GEO bulk
72 S14-150 0.65 >More info 0.64 >More info wt Original data GEO bulk
73 GST NPP1 4 h (leaf) 0.63 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
74 camta1/3 warm 0.54 >More info 0.75 >More info WT warm entire aerial part Original data GEO bulk
75 Botrytis cinerea 48h 0.63 >More info 0.66 >More info control 48h Original data GEO bulk
76 Col-0 9 hpi A. brassicicola 0.61 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
77 WT-SA 0.61 >More info 0.68 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
78 vtc1 (II) 0.70 >More info 0.59 >More info Col (II) rosette Original data GEO bulk
79 sid2-1 cold -0.56 >More info -0.73 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
80 A. thaliana-A. lyrata hybrid -0.62 >More info -0.66 >More info A. thaliana mature leaves before flowering Original data GEO bulk
81 pmr5 0.66 >More info 0.62 >More info Col-0 Original data GEO bulk
82 cs26 long day 0.61 >More info 0.67 >More info Leaves-WT-LD leaf Original data GEO bulk
83 ein2-1 9 hpi A. brassicicola 0.61 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
84 Pto inoculated 0.69 >More info 0.58 >More info col Original data GEO bulk
85 Col whole leaf 5 dpi 0.62 >More info 0.65 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
86 camta1/2/3 warm 0.60 >More info 0.67 >More info WT warm entire aerial part Original data GEO bulk
87 D2O 0.63 >More info 0.64 >More info H2O seedling Original data GEO bulk
88 eds16 whole leaf 0h UI -0.51 >More info -0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
89 irradiated leaf (WT 1d) 0.63 >More info 0.63 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
90 Leafminer damaged seedlings 0.70 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
91 apk1 apk2 0.70 >More info 0.56 >More info Col0-control whole rosette Original data GEO bulk
92 CMP 24hr 0.63 >More info 0.63 >More info Acetone 24hr root Original data GEO bulk
93 ataf1-1 mutant Col-0 Bgh inoculated 0.59 >More info 0.67 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
94 pmr4-1 powdery mildew 0.60 >More info 0.66 >More info WT powdery mildew uninoculated Original data GEO bulk
95 AvrRpm1 2 h (leaf) 0.63 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
96 Col-0 under 4 days salt 0.64 >More info 0.61 >More info Col-0 under control 4 days salt treatment rosette Original data
97 atgsnor1-1 -0.64 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
98 bio4-1 mutant watered00µM biotin leaves -0.55 >More info -0.70 >More info bio4-1 mutant leaves leaves Original data GEO bulk
99 bio4-1 mutant leaves 0.55 >More info 0.70 >More info WT leaves leaves Original data GEO bulk
100 Col0-PsmES4326-24hpi 0.64 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
101 Heat shock optimum 0.60 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
102 CAX1/CAX3 mutant 0.56 >More info 0.68 >More info Col whole plant Original data GEO bulk
103 AvrRpt2 Col-0 6hpi 0.66 >More info 0.58 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
104 ERF96OE 0.67 >More info 0.56 >More info WT leaf Original data
105 aerial organ callus inducing medium 48 h 0.61 >More info 0.62 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
106 GST 4 h (leaf) 0.51 >More info 0.72 >More info Mock 4 h (leaf) Original data Elicitor treatments
107 LTN008-2 aza-dc 0.68 >More info 0.54 >More info LTN012-2 Mock Original data
108 ice1 24H Cold 0.59 >More info 0.63 >More info WT 24H Cold Original data GEO bulk
109 4d red light grown hmr-5 seedlings 0.64 >More info 0.58 >More info 4d red light grown WT(Col-0) seedlings Original data
110 35S:RPS4 eds1-2 8h -0.57 >More info -0.65 >More info 35S:RPS4 8h leaves Original data
111 Lipopolysaccaride4 h (leaf) 0.59 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
112 Osmotic Stress 24 h (shoot) 0.65 >More info 0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
113 albino Ds13-2198-1 -0.63 >More info -0.58 >More info control Original data GEO bulk
114 efr-1 +elf18 10h -0.58 >More info -0.63 >More info WT +elf18 10h elf18 Original data GEO bulk
115 atmospheric CO2 low Mg shoot 0.67 >More info 0.54 >More info atmospheric CO2 normal Mg shoot Shoot Original data
116 Sulfometuron EC50 0.66 >More info 0.55 >More info Carrier Original data GEO bulk
117 Cor 24h 0.54 >More info 0.66 >More info Mock 24h Cor Original data GEO bulk
118 edr1 36 h powdery mildew 0.56 >More info 0.64 >More info Col-0 36 h powdery mildew Original data GEO bulk
119 bZIP1ko mutant N+Light- 0.55 >More info 0.65 >More info WT-sib N+Light- whole plant Original data GEO bulk
120 brm-101 0.59 >More info 0.61 >More info Ler Original data GEO bulk
121 DC3000 2 h (leaf) 0.59 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
122 erf104-ko Flg22 4h 0.57 >More info 0.63 >More info erf104-ko H2O 4h Original data GEO bulk
123 eds16 whole leaf 7d UI -0.50 >More info -0.69 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
124 P.syringae AvrRpt2 4 h (leaf) 0.69 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
125 penta Alternaria 3dpi 0.64 >More info 0.55 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
126 B.cinerea 18 h infection 0.64 >More info 0.55 >More info Mock 18 h Original data Botrytis cinerea infection
127 Botrytis cinerea 18h 0.64 >More info 0.55 >More info control 18h Original data GEO bulk
128 aerial organ callus inducing medium 96 h 0.60 >More info 0.59 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
129 Myzus persicae saliva 0.64 >More info 0.54 >More info Control Original data GEO bulk
130 aphid saliva treated 0.64 >More info 0.54 >More info control aphid saliva treated leaves Original data GEO bulk
131 csn5 (csn5a-2 csn5b) light 0.63 >More info 0.55 >More info WT light Original data GEO bulk
132 pepr1-1 Pepr2-3 +Pep2 2h -0.57 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
133 camta2/3 warm 0.52 >More info 0.65 >More info WT warm entire aerial part Original data GEO bulk
134 camta1/2/3 24h cold 0.54 >More info 0.63 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
135 mpk6-ko Flg22 4h 0.53 >More info 0.64 >More info mpk6-ko H2O 4h Original data GEO bulk
136 WT +Pep2 10h 0.62 >More info 0.55 >More info WT untreated Pep2 Original data GEO bulk
137 lht1 PstDC3000 48h 0.63 >More info 0.54 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
138 8h-DC3000 avrRpm1 0.56 >More info 0.61 >More info 8h-DC3000 leaves Original data GEO bulk
139 ice1 3H Cold 0.63 >More info 0.53 >More info WT 3H Cold Original data GEO bulk
140 msh1 albino 0.52 >More info 0.64 >More info WT aerial part Original data GEO bulk
141 WT-NOCO2 INFECTED 0.64 >More info 0.52 >More info WT-MOCK Original data GEO bulk
142 OE WRKY63.3 high light 0.54 >More info 0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
143 Mutant gh3.5-1D (AvrRpt2) 0.57 >More info 0.59 >More info Col-0 (AvrRpt2) Original data GEO bulk
144 Phaseolicola 2 h (leaf) 0.54 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
145 sfr3 cold 0.53 >More info 0.62 >More info WT cold All aerial tissue Original data GEO bulk
146 toc1-1-77hr 0.63 >More info 0.52 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
147 Mature callus 0.57 >More info 0.58 >More info Young callus hypocotyls Original data GEO bulk
148 aox1a(line) MLD stressed 0.65 >More info 0.50 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
149 col-5 hrpA 12h 0.50 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
150 hrpA 7h 0.54 >More info 0.61 >More info Mock 7h hrpA Original data GEO bulk
151 A6 mutant 0.53 >More info 0.61 >More info WT rosette leaves Rosette leaves Original data GEO bulk
152 abi4-102 (II) 0.64 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
153 Mutant siz1-3 (Drought) 0.52 >More info 0.62 >More info Col-0 (Drought) Original data GEO bulk
154 siz1-3 drought 0.52 >More info 0.62 >More info Col-0 drought Original data GEO bulk
155 total mRNA eif3k 0.49 >More info 0.65 >More info total mRNA WT aerial part Original data GEO bulk
156 irradiated leaf (cmt 1d) 0.68 >More info 0.45 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
157 E.coli TUV86 2 fliC 7h 0.52 >More info 0.61 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
158 20d after anthesis 0.55 >More info 0.58 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
159 cat2-hCO2 -0.62 >More info -0.51 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
160 hrcC 0.53 >More info 0.60 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
161 Te ozone 0.63 >More info 0.50 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
162 bHLH122 ox -0.61 >More info -0.52 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
163 35S::ERF104 Flg22 4h 0.55 >More info 0.58 >More info 35S::ERF104 H2O 4h Original data GEO bulk
164 Cor 10h 0.52 >More info 0.61 >More info Mock 10h Cor Original data GEO bulk
165 pho1 0.54 >More info 0.58 >More info Col2WT Original data GEO bulk
166 PBZ 0.60 >More info 0.52 >More info none PBZ Rosette Original data GEO bulk
167 cat2-2; 8h switch to ambient CO2 concentrations; 0.59 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
168 overexpresser LBD38 in -N -0.62 >More info -0.50 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
169 SOS1 0mM NaCl 0.60 >More info 0.52 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
170 flu over-tAPX 0.51 >More info 0.61 >More info WT Col Original data GEO bulk
171 E.orontii Infection 3 day 0.44 >More info 0.68 >More info Uninfection 3 day Original data Elicitor treatments
172 oas-a1.1 Cd 18h 0.45 >More info 0.67 >More info Cd 18h root Root Original data GEO bulk
173 IRP1-OE-Ctrl--shoot 0.69 >More info 0.43 >More info COL-0-Ctrl--shoot shoot Original data
174 wrky33 Bc inoculation 14h 0.65 >More info 0.46 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
175 bak1-3 +Pep2 10h 0.55 >More info 0.56 >More info WT +Pep2 10h Pep2 Original data GEO bulk
176 aerial organ callus inducing medium 12 h 0.50 >More info 0.61 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
177 wavy 0.52 >More info 0.59 >More info WT Original data GEO bulk
178 Ws 100mM NaCl 0.62 >More info 0.49 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
179 CMP 4hr 0.52 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
180 Ws leaf 100mM NaCl 0.62 >More info 0.49 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
181 aerial organ callus inducing medium 24h 0.53 >More info 0.58 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
182 mkk2 24h BTH rep 0.47 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
183 +1.6 mM Tween 20 1 h. 0.41 >More info 0.70 >More info +distilled water 1 h. Original data GEO bulk
184 upf1 0.64 >More info 0.46 >More info WT whole plant Original data GEO bulk
185 Constans-mutant 0.59 >More info 0.51 >More info Col control above-ground whole plant Original data GEO bulk
186 pad4-PsmES4326-24hpi -0.55 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
187 E.coli 0157 H7 7h 0.53 >More info 0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
188 npr1-3 DCA 48h 0.68 >More info 0.42 >More info npr1-3 MOCK 48h Original data GEO bulk
189 WT AntimycinA 3h 0.51 >More info 0.59 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
190 flu 0.54 >More info 0.55 >More info WT Col Original data GEO bulk
191 Laer treat paclobutrazol (PAC) 0.53 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
192 Elevated CO2 fully expanded leaf 0.58 >More info 0.51 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
193 Drought Stress 24 h (shoot) 0.59 >More info 0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
194 BLM+INA 0.62 >More info 0.47 >More info CK BLM and INA seedling Original data
195 leaf chr11-1chr17-1 0.62 >More info 0.47 >More info leaf Col-0 leaves Original data GEO bulk
196 rsa3-1 Na 24h 0.40 >More info 0.69 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
197 rpoTmp(line) MLD stressed 0.56 >More info 0.52 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
198 WT in -N 0.56 >More info 0.52 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
199 DFPM 0.51 >More info 0.57 >More info control Original data GEO bulk
200 Col-0-avrB-6h 0.53 >More info 0.55 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
201 Laer pretreat GA Flg22 1h 0.37 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
202 WT +elf18 2h 0.48 >More info 0.60 >More info WT untreated elf18 Original data GEO bulk
203 Fenclorim 4hr 0.51 >More info 0.56 >More info Acetone 4hr root Original data GEO bulk
204 del1-1 5dpi 0.71 >More info 0.36 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
205 coi1-16 ein2 sid2 ctrl -0.58 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
206 toc1-1-49hr 0.48 >More info 0.59 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
207 coi1-2 0.49 >More info 0.58 >More info Col-0 mock Whole seedling Original data GEO bulk
208 Primisulfuron EC50 0.53 >More info 0.53 >More info Carrier (primisulfuron) Original data GEO bulk
209 csn3-1 light 0.58 >More info 0.48 >More info WT light Original data GEO bulk
210 Fenclorim 24hr 0.53 >More info 0.53 >More info Acetone 24hr root Original data GEO bulk
211 WT Bc inoculation 14h 0.61 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
212 pepr1-1 Pepr2-3 +Pep2 10h -0.59 >More info -0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
213 pnp1-1 3h +P 0.58 >More info 0.48 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
214 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.61 >More info 0.45 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
215 AZC 0.48 >More info 0.58 >More info noneHS Original data GEO bulk
216 rosette leaves lcr 0.49 >More info 0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
217 low CO2 + light 0.48 >More info 0.58 >More info normal CO2 + light Original data GEO bulk
218 pmr4-1 control 0.49 >More info 0.57 >More info WT control uninoculated Original data GEO bulk
219 WT 2-4h Xanthomonas 0.42 >More info 0.64 >More info WT T0 Original data GEO bulk
220 npr1-1 SA -0.51 >More info -0.54 >More info Col-0 SA complete seedling Original data
221 GO5; 0h switch to ambient CO2 concentrations; -0.65 >More info -0.40 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
222 over-tAPX -0.52 >More info -0.53 >More info WT Col Original data GEO bulk
223 ASL9-ox -0.56 >More info -0.49 >More info WT aerial parts of seedlings Original data GEO bulk
224 camta3-1 0.55 >More info 0.49 >More info WT Original data GEO bulk
225 scrm-D 0.61 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
226 rosette leaves bdg 0.54 >More info 0.50 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
227 Col laser microdissected 5 dpi 0.43 >More info 0.61 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
228 anac017-2 AntimycinA 3h -0.46 >More info -0.58 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
229 rcf1-1 cold 24h 0.52 >More info 0.51 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
230 SPT4-R3 seedlings0 DAS 0.51 >More info 0.52 >More info Col-0 seedlings0 DAS seedlings Original data
231 Octopus overexpressor 35SDYG25 0.56 >More info 0.47 >More info WS Original data GEO bulk
232 eds16 whole leaf 7dpi -0.41 >More info -0.62 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
233 Col leaves 48h LT 0.47 >More info 0.56 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
234 CT101 ozone 0.58 >More info 0.44 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
235 M6PR transgenic 0mM NaCl 0.53 >More info 0.49 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
236 anac017-1 H2O2 3h -0.51 >More info -0.51 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
237 aox1a:rpoTmp untreated 0.50 >More info 0.52 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
238 Dark 3day ivd 0.51 >More info 0.51 >More info 0h ivd Original data
239 nhx5-1/nhx6 0.58 >More info 0.44 >More info WT Rosette leaf Original data GEO bulk
240 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.48 >More info Col ozone 2d ozone Original data GEO bulk
241 nas4x leaves - Fe -0.48 >More info -0.54 >More info WT leaves - Fe Leaves Original data GEO bulk
242 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.58 >More info 0.43 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
243 WT 1wk -P 0.51 >More info 0.50 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
244 pnp1-1 1wk +P 0.56 >More info 0.45 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
245 agb1 gpa1 +ABA LF -0.49 >More info -0.52 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
246 atmospheric CO2 high Mg shoot 0.62 >More info 0.38 >More info atmospheric CO2 normal Mg shoot Shoot Original data
247 Col-0 ozone 0.58 >More info 0.42 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
248 Tsu -Fe 48h Shoots 0.58 >More info 0.42 >More info Tsu +Fe 24h Shoots Original data GEO bulk
249 col-5 DC3000 12h 0.44 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
250 Time-0 chr11-1chr17-1 -0.49 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
251 mbd6 mutant thaliana 10-day-old seedling 0.48 >More info 0.52 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
252 35S-MIF1 light grown 0.60 >More info 0.39 >More info Light-grown WT control Original data GEO bulk
253 Leafminer systemically damaged thaliana seedlings 0.57 >More info 0.42 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
254 Got7 UV 0.33 >More info 0.66 >More info Got7 mock UV seedling Original data
255 16h Col-0 0.36 >More info 0.63 >More info 00h Col-0 Original data GEO bulk
256 mil4 BTH 0.45 >More info 0.54 >More info Col BTH rosettes Original data GEO bulk
257 Glyphosate EC50 0.55 >More info 0.43 >More info Carrier (Glyphosate) Original data GEO bulk
258 miR393 0h -0.27 >More info -0.71 >More info WT 0h Leaf tissue Original data GEO bulk
259 OE WRKY40.4 high light 0.43 >More info 0.55 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
260 dde2-2 9 hpi A. brassicicola 0.42 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
261 lht1 untreated 0.53 >More info 0.44 >More info WT untreated untreated leaf Original data GEO bulk
262 coi1-16 ein2 sid2 ozone 0.57 >More info 0.40 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
263 Atss3 Light4 -0.46 >More info -0.51 >More info Atss3 Dark0.5 Original data GEO bulk
264 WT Col-0 Bgh inoculated 0.39 >More info 0.58 >More info WT Col-0 Un-inoculated Original data GEO bulk
265 Shoot submergence 24h 0.44 >More info 0.53 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
266 tt4 0.46 >More info 0.51 >More info Col-0 aerial part Original data
267 Laer MeJA 1h -0.51 >More info -0.45 >More info Laer Control leaf discs Original data GEO bulk
268 csn4-1 dark 0.54 >More info 0.42 >More info WT light Original data GEO bulk
269 DC3000 24h 0.53 >More info 0.43 >More info Mock 24h DC3000 Original data GEO bulk
270 Light 3day wt -0.37 >More info -0.59 >More info 0h wt Original data
271 sex1-3 0.46 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
272 gun1gun5 far-red pretreated -0.46 >More info -0.50 >More info WT far-red pretreated Original data GEO bulk
273 atmyc2 cop1 Seedling BL 0.42 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
274 eds16 whole leaf 6hpi -0.39 >More info -0.56 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
275 Shoot dark control 7h 0.40 >More info 0.55 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
276 JMJ24 knockout 0.53 >More info 0.42 >More info WT Original data GEO bulk
277 Tsu -Fe 24h Shoots 0.56 >More info 0.38 >More info Tsu +Fe 24h Shoots Original data GEO bulk
278 leaf blade in D 0.40 >More info 0.54 >More info leaf blade in WL leaf blades Original data GEO bulk
279 npr1-PsmES4326-24hpi -0.39 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
280 Differentiation 12h 0.58 >More info 0.36 >More info Differentiation 0h leaves Original data
281 abh1 -ABA 0.58 >More info 0.36 >More info Col-0 -ABA Original data GEO bulk
282 Col-0 flu HL 3h 0.50 >More info 0.44 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
283 WT +Pep2 2h 0.59 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
284 anac017-2 H2O2 3h -0.52 >More info -0.42 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
285 edr1 0 h powdery mildew 0.40 >More info 0.53 >More info Col-0 0 h powdery mildew Original data GEO bulk
286 ARR21C-ox 0.59 >More info 0.34 >More info Col-0 Original data ARR21C overexpression
287 Heat shock 20%Inhibition 0.55 >More info 0.37 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
288 seedlings protease IV 0.39 >More info 0.53 >More info seedlings nontreated control whole seedling Original data
289 seedling 1.5h after HZE atm-1 0.40 >More info 0.52 >More info seedling day 1 unirradiated atm-1 1.5h Original data
290 ex1ex2flu dark 8hours/30 minute light -0.63 >More info -0.29 >More info col dark 8hours/30 minute light Original data GEO bulk
291 apum23 0.50 >More info 0.42 >More info WT (Col-3) aerial parts Original data GEO bulk
292 UV 0.51 >More info 0.41 >More info WT aerial region Original data GEO bulk
293 toc1-1-53hr 0.51 >More info 0.41 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
294 petiole in D 0.42 >More info 0.50 >More info petiole in WL petioles Original data GEO bulk
295 20h Col-0 0.32 >More info 0.60 >More info 00h Col-0 Original data GEO bulk
296 npr1 sni1 ssn2 -0.53 >More info -0.38 >More info npr1 sni1 water water seedling Original data GEO bulk
297 rcf1-1 cold 0h 0.53 >More info 0.38 >More info WT cold 0h Control seedlings Original data GEO bulk
298 Col-O high light 0.50 >More info 0.41 >More info Col-O bule light Original data GEO bulk
299 cop1 Seedling BL 0.50 >More info 0.41 >More info WT Seedling BL Original data GEO bulk
300 Imidazolinone EC50 0.54 >More info 0.36 >More info Carrier (Imidazolinone) Original data GEO bulk
301 8hr-pH4.5 0.52 >More info 0.38 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
302 shoots bhlh100/101 0uM Fe 0.51 >More info 0.39 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
303 seedlings +5AC 0.53 >More info 0.37 >More info control seedlings 10-day old whole seedling Original data GEO bulk
304 C24 ozone 0.55 >More info 0.35 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
305 Red Light 4 h 0.36 >More info 0.54 >More info White Light 4 h Original data Light treatments
306 Shoot dark control 24h 0.35 >More info 0.55 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
307 BAM7-Lig Ox untreated 0.30 >More info 0.60 >More info WT untreated none shoot Original data
308 seedling 12h after HZE atm-1 0.31 >More info 0.59 >More info seedling day 1 unirradiated atm-1 12h Original data
309 pnp1-1 1wk -P 0.53 >More info 0.36 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
310 low water potential 0.52 >More info 0.37 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
311 Dark 6h ivd 0.37 >More info 0.51 >More info 0h ivd Original data
312 Atss3 Light1 -0.29 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
313 6h volatiles Sp. HRO-C48 0.32 >More info 0.55 >More info 6h untreated whole seedling Original data GEO bulk
314 Col-0 Flg22 4h 0.37 >More info 0.50 >More info Col-0 H2O 4h Original data GEO bulk
315 Col-0 DCA 48h 0.26 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
316 WT 3h -P 0.30 >More info 0.57 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
317 Elevated CO2 expanding leaf 0.56 >More info 0.30 >More info Ambient CO2 expanding leaf expanding leaf Original data
318 siliques AtHb1 control 0.34 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
319 dense canopy 0.35 >More info 0.51 >More info single (control) petiole Original data GEO bulk
320 rpl24 polysome 0.57 >More info 0.29 >More info WT polysome seedling shoot/aerial seedling Original data
321 rpl24 total 0.54 >More info 0.31 >More info WT total seedling shoot/aerial seedling Original data
322 Chitosan 3h Treatment 0.53 >More info 0.32 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
323 mbd4 mutant thaliana 10-day-old seedling 0.51 >More info 0.33 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
324 WT Atum 2h 0.33 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
325 ein5-1 ski2-3 0.51 >More info 0.32 >More info Col-0 aerial tissue Original data
326 C24 24h cold -0.50 >More info -0.33 >More info Col 24h cold leaf Original data GEO bulk
327 ARR22-ox (t-zeatin 3 h) 0.51 >More info 0.32 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
328 eif3h 0.57 >More info 0.26 >More info WT Original data GEO bulk
329 35SAvr 0.29 >More info 0.53 >More info Ecotype Col Original data GEO bulk
330 12h Col-0 0.31 >More info 0.51 >More info 00h Col-0 Original data GEO bulk
331 pip3 At2g19270 RNAi 24 -0.31 >More info -0.50 >More info Nd-1 whole plant Original data GEO bulk
332 Col-0 +lincomycin 0.28 >More info 0.53 >More info Col-0 -lincomycin Original data GEO bulk
333 Leaf systemic -0.54 >More info -0.26 >More info Leaf control vegetative leaf Original data GEO bulk
334 DUO1 induced 6h -0.53 >More info -0.27 >More info 6hr-not-induced whole plant Original data GEO bulk
335 ataf1-1 mutant Col-0 Un-inoculated -0.51 >More info -0.28 >More info WT Col-0 Un-inoculated Original data GEO bulk
336 downy mildew cotyledons late stage 0.56 >More info 0.23 >More info mock inoculated Cotyledons Original data GEO bulk
337 seedling 12h after Gamma atm-1 0.22 >More info 0.57 >More info seedling day 1 unirradiated atm-1 12h Original data
338 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.59 >More info -0.19 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
339 sex4-3 -0.25 >More info -0.53 >More info Col-WT leaves Original data GEO bulk
340 9 hr Hypoxia IP RNA 0.26 >More info 0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
341 eif3h polysome 0.57 >More info 0.21 >More info WT polysome Original data GEO bulk
342 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
343 Shoot P recovery 0.58 >More info 0.19 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
344 ORS1 induced 0.51 >More info 0.25 >More info mock-induced rosette leaves Original data GEO bulk
345 camta1-2 0.24 >More info 0.52 >More info Col-0-WT Original data GEO bulk
346 AtMYB30-ox 2-4h Xanthomonas 0.59 >More info 0.16 >More info WT 2-4h Xanthomonas Original data GEO bulk
347 eds16 whole leaf 1dpi -0.06 >More info -0.69 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
348 OE-HRA1 2HS  0.50 >More info 0.24 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
349 eif3h non-polysome 0.53 >More info 0.21 >More info WT non-polysome Original data GEO bulk
350 SA Treated 0.66 >More info 0.08 >More info Water Original data GEO bulk
351 Col-0 DCA 6d 0.50 >More info 0.23 >More info Col-0 MOCK 6d Original data GEO bulk
352 penta Control 0.53 >More info 0.20 >More info Laer Control leaf discs Original data GEO bulk
353 phyB mutant 22C 10hrs -0.14 >More info -0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
354 C24 UV1 -0.56 >More info -0.16 >More info C24 mock UV seedling Original data
355 Col-0 2HS 0.18 >More info 0.53 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
356 cca1-lhy 30m light 0.17 >More info 0.53 >More info 30m light whole seedlings Original data GEO bulk
357 WT (Col-0) inflorescence drought day 10 0.50 >More info 0.20 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
358 light -0.52 >More info -0.18 >More info dark light seedling Original data GEO bulk
359 col-5 DC3000 4h 0.13 >More info 0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
360 ein2 0.58 >More info 0.11 >More info Col-0 Leaves Original data GEO bulk
361 GST-overexpression seedlings control 0.51 >More info 0.18 >More info WT seedlings control Seedlings Original data
362 GO5; harvested 8h continiously maintained in high
CO2;		 -0.52 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
363 rpl24 nonpolysome 0.50 >More info 0.18 >More info WT nonpolysome seedling shoot/aerial seedling Original data
364 anac017-2 water 3h -0.53 >More info -0.14 >More info WT water 3h 3h_water Original data GEO bulk
365 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
366 vte2 leaves 120h LT 0.63 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
367 OE WRKY63.3 0.16 >More info 0.51 >More info OE WRKY40.4 none leaf Original data GEO bulk
368 OE WRKY40.4 -0.50 >More info -0.15 >More info OE WRKY40.4 none leaf Original data GEO bulk
369 pvip1 pvip2 seedling 0.67 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
370 des1 water 0.50 >More info 0.14 >More info WT water water leaf Original data GEO bulk
371 bri1-116 -0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
372 Cs shoot -0.09 >More info -0.52 >More info control shoot Original data GEO bulk
373 CCA1-ox 6am non-polysomal 0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
374 HairpinZ 4 h (leaf) 0.62 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
375 WT 6H Cold 0.08 >More info 0.51 >More info WT control Original data GEO bulk
376 t-zeatin 0.5 h 0.06 >More info -0.64 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
377 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
378 CMV-A2b mutant 0.51 >More info 0.02 >More info Mock-At Aerial tissues Original data GEO bulk
379 seed germinating in countinuous light 24h SL -0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
380 P. infestans 6 h (leaf) 0.62 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
381 Shoot apex inflorescence (after bolting) -0.22 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
382 G3P 0.58 >More info -0.17 >More info Mock distal leaves Original data GEO bulk
383 Light 3day hml -0.28 >More info 0.52 >More info 0h hml Original data
384 Shoot -P -0.51 >More info 0.35 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk