4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Differentiation 12h
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List of experiments correlated with "Differentiation 12h"  Help Download transcriptome of top 30
Score Experiment Correlation from
Differentiation 12h		 Correlation to
Differentiation 12h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Differentiation 12h 1.00 >More info 1.00 >More info Differentiation 0h leaves Original data
2 Differentiation 24h 0.93 >More info 0.91 >More info Differentiation 0h leaves Original data
3 Differentiation 36h 0.89 >More info 0.84 >More info Differentiation 0h leaves Original data
4 Differentiation 48h 0.87 >More info 0.83 >More info Differentiation 0h leaves Original data
5 lht1 PstDC3000 48h 0.68 >More info 0.74 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
6 B.cinerea 18 h infection 0.69 >More info 0.73 >More info Mock 18 h Original data Botrytis cinerea infection
7 Botrytis cinerea 18h 0.69 >More info 0.73 >More info control 18h Original data GEO bulk
8 PAHs stress 0.75 >More info 0.66 >More info exp control phenanthrene whole plants Original data GEO bulk
9 DC3000 2 h (leaf) 0.67 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
10 Imidazolinone EC50 0.67 >More info 0.66 >More info Carrier (Imidazolinone) Original data GEO bulk
11 aerial organ callus inducing medium 96 h 0.65 >More info 0.67 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
12 Glyphosate EC50 0.63 >More info 0.69 >More info Carrier (Glyphosate) Original data GEO bulk
13 Sulfometuron EC50 0.71 >More info 0.61 >More info Carrier Original data GEO bulk
14 nia1nia2 0.68 >More info 0.63 >More info Col-0 whole seedlings Original data GEO bulk
15 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.67 >More info 0.63 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
16 Col ozone 2d 0.66 >More info 0.63 >More info Col clean-air 2d ozone Original data GEO bulk
17 Col whole leaf amplified 5 dpi 0.61 >More info 0.67 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
18 sta1 0.63 >More info 0.64 >More info WT Original data GEO bulk
19 Botrytis cinerea 48h 0.63 >More info 0.64 >More info control 48h Original data GEO bulk
20 Shoot -Cs 0.66 >More info 0.60 >More info Control-shoot Original data GEO bulk
21 WT cold 0.59 >More info 0.67 >More info WT control All aerial tissue Original data GEO bulk
22 S15-118 0.51 >More info 0.75 >More info wt Original data GEO bulk
23 amiR-tor induced 6d 0.59 >More info 0.67 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
24 Cor 10h 0.62 >More info 0.64 >More info Mock 10h Cor Original data GEO bulk
25 Col leaves 48h LT 0.57 >More info 0.68 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
26 long 10-degree- 0.57 >More info 0.68 >More info control long Original data GEO bulk
27 col 24h4c set4 0.62 >More info 0.63 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
28 RPL18 TuMV inoculated total RNA 0.59 >More info 0.66 >More info mock inoculated total RNA PO Original data GEO bulk
29 Leaf GLU1-KO 0.61 >More info 0.63 >More info Leaf Col(0) rosette leaves Original data GEO bulk
30 Stem tissue 5 days NAA 0.60 >More info 0.64 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
31 low water potential 0.66 >More info 0.58 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
32 col-5 hrpA 2h 0.61 >More info 0.62 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
33 aerial organ callus inducing medium 48 h 0.64 >More info 0.59 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
34 DFPM 0.56 >More info 0.66 >More info control Original data GEO bulk
35 phr1 phl1 Root-Pi 0.56 >More info 0.66 >More info WT Shoot+Pi roots Original data GEO bulk
36 treated group 0.60 >More info 0.62 >More info Control group Original data
37 RPL18 TuMV inoculated polysomal RNA 0.61 >More info 0.61 >More info mock inoculated polysomal RNA PO Original data GEO bulk
38 Primisulfuron EC50 0.64 >More info 0.57 >More info Carrier (primisulfuron) Original data GEO bulk
39 Phaseolicola 2 h (leaf) 0.62 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
40 lht1 untreated 0.58 >More info 0.62 >More info WT untreated untreated leaf Original data GEO bulk
41 nia1nia2noa1-2 0.62 >More info 0.58 >More info Col-0 whole seedlings Original data GEO bulk
42 HopZ1a treated 0.60 >More info 0.60 >More info col Original data GEO bulk
43 short 12-degree- 0.49 >More info 0.71 >More info control short Original data GEO bulk
44 Seedling KUA1-IOX est 0.52 >More info 0.67 >More info Seedling KUA1-IOX mock Original data
45 essp4/sdg8-5 mutant 0.68 >More info 0.51 >More info wild type leaf Original data GEO bulk
46 Col-7 Sucrose 0.58 >More info 0.61 >More info col-7 Original data GEO bulk
47 Cambium 5 days NAA 0.58 >More info 0.61 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
48 short 17-degree- 0.56 >More info 0.63 >More info control short Original data GEO bulk
49 del1-1 mutant 5d uninfected 0.53 >More info 0.65 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
50 ice1 6H Cold 0.67 >More info 0.51 >More info WT 6H Cold Original data GEO bulk
51 Triazolopyrimidine EC50 0.62 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
52 IMI 4mM 0.54 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
53 35S::PI ap3-3 35S::AP-GR +DEX 0.58 >More info 0.60 >More info 0hr DEX Original data GEO bulk
54 AvrRpt2 Col-0 6hpi 0.65 >More info 0.52 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
55 Col whole leaf 7dpi 0.54 >More info 0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
56 WT in -N 0.59 >More info 0.58 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
57 Col-0 (t-zeatin 3 h) 0.48 >More info 0.69 >More info Col-0 Original data Cytokinin treatment of seedlings
58 NAA -AA 0.62 >More info 0.54 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
59 aerial organ callus inducing medium 24h 0.60 >More info 0.56 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
60 short 14-degree- 0.49 >More info 0.67 >More info control short Original data GEO bulk
61 root callus inducing medium 12 h 0.57 >More info 0.59 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
62 Norflurazon 0.50 >More info 0.65 >More info Col-0 Original data GEO bulk
63 col-5 DC3000-avrRpm 4h 0.57 >More info 0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
64 Laer treat paclobutrazol (PAC) 0.52 >More info 0.63 >More info Laer Control leaf discs Original data GEO bulk
65 Norflurazon 0.50 >More info 0.65 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
66 AsAKiin11 T1 0.51 >More info 0.63 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
67 S58-2 0.54 >More info 0.60 >More info wt Original data GEO bulk
68 eif3h polysome 0.61 >More info 0.53 >More info WT polysome Original data GEO bulk
69 ARR21C-ox 0.65 >More info 0.49 >More info Col-0 Original data ARR21C overexpression
70 cngc1-3 0.49 >More info 0.65 >More info Col-0 root Original data GEO bulk
71 Laer pretreat GA Flg22 1h 0.43 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
72 ws 24h4c q8ws 0.62 >More info 0.51 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
73 col-5 hrpA 12h 0.52 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
74 COL-0-Fe--shoot 0.53 >More info 0.60 >More info COL-0-Ctrl--shoot shoot Original data
75 Col-0-avrB-6h 0.55 >More info 0.58 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
76 ice1 24H Cold 0.63 >More info 0.49 >More info WT 24H Cold Original data GEO bulk
77 4C 24h 0.51 >More info 0.61 >More info 4C 0h Original data GEO bulk
78 WT (Col) glucose 0.49 >More info 0.63 >More info WT (Col) glucose seedlings Original data GEO bulk
79 35S::MBF1c -0.45 >More info -0.67 >More info control Original data GEO bulk
80 Cor hrpS 10h 0.56 >More info 0.55 >More info Mock 10h Cor hrpS Original data GEO bulk
81 aerial organ callus inducing medium 12 h 0.57 >More info 0.54 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
82 E.coli TUV86 2 fliC 7h 0.54 >More info 0.57 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
83 long 8-degree- 0.53 >More info 0.58 >More info control long Original data GEO bulk
84 Col-0 9 hpi A. brassicicola 0.51 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 erf104-ko Flg22 4h 0.54 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
86 WT+sucrose 0.54 >More info 0.57 >More info WT+no sugars rosette leaves Original data GEO bulk
87 sdg8-2 mutant 0.63 >More info 0.48 >More info wild type leaf Original data GEO bulk
88 SLWF infested 0.47 >More info 0.64 >More info SLWF uninfested rosette tissue Original data GEO bulk
89 Col-0 Root 100 mM ATP 30 min -0.53 >More info -0.57 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
90 Pto inoculated 0.55 >More info 0.55 >More info col Original data GEO bulk
91 clf-28 swn-7 0.59 >More info 0.51 >More info Col whole plant Original data GEO bulk
92 4h decapitation 0.49 >More info 0.61 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
93 aba3-1 0.43 >More info 0.67 >More info wt Original data GEO bulk
94 WT Seedling BL -0.46 >More info -0.64 >More info WT Seedling Dark Original data GEO bulk
95 C58 35dpi 0.53 >More info 0.56 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
96 Whole root - S 3H 0.42 >More info 0.67 >More info Whole root - S 0H Original data GEO bulk
97 DC3000 7h 0.50 >More info 0.59 >More info Mock 7h DC3000 Original data GEO bulk
98 rao2 H2O2 3h -0.50 >More info -0.59 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
99 E.coli 0157 H7 7h 0.48 >More info 0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
100 WT 1wk -P 0.53 >More info 0.55 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
101 apk1 apk2 0.55 >More info 0.53 >More info Col0-control whole rosette Original data GEO bulk
102 WT mitomycin C 0.59 >More info 0.49 >More info WT mock shoot apical meristem Original data
103 HopZ1a treated ulp1c ulp1d 0.55 >More info 0.53 >More info col Original data GEO bulk
104 csn5 (csn5a-2 csn5b) light 0.64 >More info 0.44 >More info WT light Original data GEO bulk
105 6-trichlorophenoxyacetic acid 3 h 0.40 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
106 WT powdery mildew 0.56 >More info 0.51 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
107 Laer Flg22 2h 0.54 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
108 Col0-PsmES4326-24hpi 0.46 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
109 cpr5npr1svi1 0.41 >More info 0.66 >More info WT(COL) Original data GEO bulk
110 ARR22-ox 0.59 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
111 tumour 0.50 >More info 0.57 >More info non-tumor tumour Original data GEO bulk
112 long 14-degree- 0.47 >More info 0.60 >More info control long Original data GEO bulk
113 ABA DFPM 0.49 >More info 0.58 >More info control Original data GEO bulk
114 Col whole leaf 5dpi 0.51 >More info 0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
115 Elevated CO2 AMPLE N NIGHT 0.37 >More info 0.69 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
116 cdkf:1-2 0.56 >More info 0.49 >More info wt seedling young seedlings Original data GEO bulk
117 Heat no recovery 0.52 >More info 0.53 >More info Mock no recovery seedling Original data GEO bulk
118 hrpA 7h 0.54 >More info 0.51 >More info Mock 7h hrpA Original data GEO bulk
119 Col-0 drought 0.55 >More info 0.50 >More info Col-0 control Original data GEO bulk
120 Mutant bri1 -0.57 >More info -0.48 >More info Ws-2 Original data Comparison of plant hormone related mutant
121 WT Col-0 Bgh inoculated 0.48 >More info 0.57 >More info WT Col-0 Un-inoculated Original data GEO bulk
122 ice1 3H Cold 0.67 >More info 0.37 >More info WT 3H Cold Original data GEO bulk
123 3d old, both 10mM sucrose and 0.2µM SMX 0.53 >More info 0.51 >More info control Whole seedling Original data GEO bulk
124 Shoot -K 0.58 >More info 0.46 >More info Control-shoot Original data GEO bulk
125 K starvation (shoot) 0.58 >More info 0.46 >More info Ws (shoot) Original data GEO bulk
126 elf3-7-16ºC 0.49 >More info 0.55 >More info WT-16ºC Original data GEO bulk
127 phr1 Shoot-Pi -0.44 >More info -0.60 >More info WT Root-Pi shoots Original data GEO bulk
128 col-5 DC3000 12h 0.47 >More info 0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
129 cop1 Seedling Dark -0.45 >More info -0.59 >More info WT Seedling Dark Original data GEO bulk
130 vte2 leaves 48h LT 0.48 >More info 0.56 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
131 Laer Flg22+GA 2h 0.50 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
132 UV 0.56 >More info 0.47 >More info WT aerial region Original data GEO bulk
133 penta Alternaria 3dpi 0.52 >More info 0.51 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
134 short 10-degree- 0.41 >More info 0.62 >More info control short Original data GEO bulk
135 Whole root - S 12H 0.48 >More info 0.55 >More info Whole root - S 0H Original data GEO bulk
136 35S:RPS4 eds1-2 8h -0.49 >More info -0.54 >More info 35S:RPS4 8h leaves Original data
137 irradiated leaf (cmt 1d) 0.53 >More info 0.49 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
138 eif3h 0.58 >More info 0.44 >More info WT Original data GEO bulk
139 ASL9-ox -0.51 >More info -0.51 >More info WT aerial parts of seedlings Original data GEO bulk
140 rosette leaves bdg 0.33 >More info 0.69 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
141 msh1 albino 0.47 >More info 0.55 >More info WT aerial part Original data GEO bulk
142 Col-O low light -0.49 >More info -0.53 >More info Col-O bule light Original data GEO bulk
143 ice1 control 0.64 >More info 0.37 >More info WT control Original data GEO bulk
144 eif3h non-polysome 0.57 >More info 0.44 >More info WT non-polysome Original data GEO bulk
145 pnp1-1 3h +P 0.58 >More info 0.43 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
146 long 12-degree- 0.52 >More info 0.49 >More info control long Original data GEO bulk
147 35S:RPS4 eds1-2 24h -0.51 >More info -0.50 >More info 35S:RPS4 24h leaves Original data
148 mkk1/mkk2 control rep 0.48 >More info 0.53 >More info Col-0 Time 0 rep Original data GEO bulk
149 mkk1/mkk2 24h BTH rep 0.46 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
150 sid2 -0.48 >More info -0.53 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
151 mil4 BTH 0.45 >More info 0.56 >More info Col BTH rosettes Original data GEO bulk
152 Col leaves 120h LT 0.42 >More info 0.59 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
153 shoots bhlh100/101 0uM Fe 0.54 >More info 0.46 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
154 abh1 -ABA 0.52 >More info 0.48 >More info Col-0 -ABA Original data GEO bulk
155 mpk6-ko Flg22 4h 0.54 >More info 0.46 >More info mpk6-ko H2O 4h Original data GEO bulk
156 root callus inducing medium 24h 0.54 >More info 0.46 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
157 Whole root - low pH 24H 0.48 >More info 0.52 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
158 sicy-192 cotyledons 0.47 >More info 0.53 >More info WT cotyledons cotyledons Original data
159 IRP1-OE-Ctrl--shoot 0.49 >More info 0.51 >More info COL-0-Ctrl--shoot shoot Original data
160 gun1gun5 far-red pretreated -0.58 >More info -0.41 >More info WT far-red pretreated Original data GEO bulk
161 dor drought 0.41 >More info 0.58 >More info WT drought Original data GEO bulk
162 35S::ERF104 Flg22 4h 0.49 >More info 0.50 >More info 35S::ERF104 H2O 4h Original data GEO bulk
163 mutant acs6E (single mutant) 0.49 >More info 0.50 >More info col control (single mutant) Original data GEO bulk
164 AvrRpm1 2 h (leaf) 0.53 >More info 0.45 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
165 Mutant iaa5_6_19(IAA) 0.51 >More info 0.47 >More info Col (IAA) Original data GEO bulk
166 1h light (+Lincomycin) 0.50 >More info 0.48 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
167 35S:VND7-VP16-GR+CHX 0.55 >More info 0.43 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
168 AmGSTF1 expressor -0.51 >More info -0.47 >More info WT leaf tissue Original data GEO bulk
169 ex1 flu dark 8hours/30 minute light -0.44 >More info -0.54 >More info col dark 8hours/30 minute light Original data GEO bulk
170 apum23 0.45 >More info 0.53 >More info WT (Col-3) aerial parts Original data GEO bulk
171 cat2-2; 8h switch to ambient CO2 concentrations; 0.44 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
172 GO5; 8h switch to ambient CO2 concentrations; 0.42 >More info 0.56 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
173 efr-1 +elf18 10h -0.42 >More info -0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
174 phyAphyB Dark 0.46 >More info 0.51 >More info phyB Dark Original data GEO bulk
175 Col BTH 0.30 >More info 0.67 >More info Col rosettes Original data GEO bulk
176 S14-150 0.40 >More info 0.56 >More info wt Original data GEO bulk
177 wrky33 Bc inoculation 14h 0.52 >More info 0.44 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
178 GST NPP1 4 h (leaf) 0.52 >More info 0.44 >More info Mock 4 h (leaf) Original data Elicitor treatments
179 0.5h light (+Lincomycin) 0.51 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
180 phyB Dark -0.46 >More info -0.50 >More info WT(Ler) Dark Original data GEO bulk
181 dde2-2 9 hpi A. brassicicola 0.38 >More info 0.58 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
182 seedling 24h after Gamma atm-1 0.41 >More info 0.55 >More info seedling day 2 unirradiated atm-1 24h Original data
183 Col-0 SA 0.55 >More info 0.40 >More info Col-0 water complete seedling Original data
184 seedling 1.5h after Gamma atm-1 0.39 >More info 0.56 >More info seedling day 1 unirradiated atm-1 1.5h Original data
185 WT-elf18 0.50 >More info 0.45 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
186 pnp1-1 1wk +P 0.54 >More info 0.41 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
187 afb3-1 2h KNO3 -0.22 >More info -0.73 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
188 csn3-1 light 0.56 >More info 0.38 >More info WT light Original data GEO bulk
189 Dark 0.40 >More info 0.54 >More info Control Original data GEO bulk
190 eds16 whole leaf 7d UI -0.44 >More info -0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
191 35S::HRE2 Hypoxic -0.44 >More info -0.50 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
192 pnp1-1 3h -P 0.44 >More info 0.50 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
193 Stem tissue 2 days NAA 0.32 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
194 Col-0 48 hpi 0.36 >More info 0.58 >More info Col-0 uninoculated Original data GEO bulk
195 WT light -0.38 >More info -0.55 >More info WT dark Original data GEO bulk
196 Mutant siz1-3 0.43 >More info 0.50 >More info Col-0 Original data GEO bulk
197 ataf1-1 mutant Col-0 Bgh inoculated 0.41 >More info 0.52 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
198 siz1-3 control 0.43 >More info 0.50 >More info Col-0 control Original data GEO bulk
199 AZC 0.52 >More info 0.40 >More info noneHS Original data GEO bulk
200 WT-SA 0.55 >More info 0.37 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
201 Col-0 mbs1-1 HL 0h 0.54 >More info 0.38 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
202 rao1-2 0.55 >More info 0.37 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
203 tmm1-inflorescence-tips 0.39 >More info 0.53 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
204 ABA control 0.38 >More info 0.54 >More info No ABA control Original data GEO bulk
205 NAA 3h 0.51 >More info 0.41 >More info before treatment NAA root Original data GEO bulk
206 brm-101 0.51 >More info 0.41 >More info Ler Original data GEO bulk
207 WT Bc inoculation 14h 0.51 >More info 0.41 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
208 Col whole leaf 5 dpi 0.29 >More info 0.63 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
209 WT 3H Cold -0.22 >More info -0.70 >More info WT control Original data GEO bulk
210 gh3.5-1D 48 hpi 0.42 >More info 0.50 >More info Col-0 uninoculated Original data GEO bulk
211 Dry pre-dawn 0.28 >More info 0.63 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
212 ein2-1 9 hpi A. brassicicola 0.40 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
213 Col leaf scrape 5 dpi 0.59 >More info 0.32 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
214 Ibuprofen 3 h 0.34 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
215 WT roots - Fe 0.21 >More info 0.70 >More info WT roots + Fe Roots Original data GEO bulk
216 FAMA induced 48h 0.55 >More info 0.35 >More info control 48h Whole seedling Original data GEO bulk
217 Laer pretreat GA+JA Flg22 0h 0.51 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
218 Laer pretreat GA+JA Flg22 1h 0.50 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
219 LTN008-2 aza-dc 0.52 >More info 0.38 >More info LTN012-2 Mock Original data
220 seedling -S Exp 0.52 >More info 0.38 >More info seedling FN Exp seedling Original data
221 short 8-degree- 0.40 >More info 0.50 >More info control short Original data GEO bulk
222 seedling 24h after Gamma WT 0.37 >More info 0.53 >More info seedling day 2 unirradiated WT 24h Original data
223 T6 leaf-drought 0.55 >More info 0.34 >More info T6 leaf-well watered Original data GEO bulk
224 seedlings +5AC 0.53 >More info 0.36 >More info control seedlings 10-day old whole seedling Original data GEO bulk
225 T8 leaf-drought 0.53 >More info 0.36 >More info T8 leaf-well watered Original data GEO bulk
226 JMJ24 knockout 0.50 >More info 0.39 >More info WT Original data GEO bulk
227 long 17-degree- 0.51 >More info 0.38 >More info control long Original data GEO bulk
228 4C 1h -0.26 >More info -0.63 >More info 4C 0h Original data GEO bulk
229 amiRAP hypoxic -0.29 >More info -0.60 >More info hypoxic hypoxia Original data GEO bulk
230 PNO8 12 h -0.32 >More info -0.56 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
231 GSH 0.33 >More info 0.55 >More info control GSH treated seedlings Original data GEO bulk
232 opr3 JA 0.5 h -0.20 >More info -0.68 >More info opr3 0 h Original data GEO bulk
233 Brz220 3 h 0.53 >More info 0.35 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
234 Flagellin 4 h (leaf) 0.51 >More info 0.37 >More info Mock 4 h (leaf) Original data Elicitor treatments
235 col-5 DC3000 4h 0.50 >More info 0.38 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
236 C58 6dpi 0.53 >More info 0.34 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
237 tor mutant 0.50 >More info 0.37 >More info WT (Col) none seedlings Original data GEO bulk
238 Dark 4 h pls RedLight 1min -0.23 >More info -0.64 >More info Dark 4 h Original data Light treatments
239 ANOXIA -0.25 >More info -0.62 >More info ANOXIA+SUCROSE Original data GEO bulk
240 Leaf wounded -0.35 >More info -0.52 >More info Leaf control vegetative leaf Original data GEO bulk
241 WT resupplied Pi 4h 0.54 >More info 0.32 >More info WT complete seedlings Original data
242 R. solani AG8 0.55 >More info 0.31 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
243 Leafminer damaged seedlings 0.30 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
244 3x(p) -0.33 >More info -0.53 >More info 2x two week old seedlings Original data
245 hrpA fliC 7h 0.51 >More info 0.35 >More info Mock 7h hrpA fliC Original data GEO bulk
246 root epidermis and lateral root cap pH4.6 0.35 >More info 0.51 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
247 4C 2h(SOIL) -0.09 >More info -0.77 >More info 4C 0h(SOIL) Original data GEO bulk
248 ERF96OE 0.36 >More info 0.50 >More info WT leaf Original data
249 spx1 spx2 complete 0.57 >More info 0.29 >More info WT complete seedlings Original data
250 COL-0-Fe--root 0.55 >More info 0.30 >More info COL-0-Ctrl--root root Original data
251 root endodermis and quiescent center pH4.6 0.32 >More info 0.53 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
252 pnp1-1 1wk -P 0.54 >More info 0.30 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
253 miR393 flg22 2h 0.32 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
254 miR393 0h -0.33 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
255 Heat shock optimum 0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
256 Wounding Stress3 h (root) -0.30 >More info -0.52 >More info Stress mock 3 h (root) Original data Stress treatments
257 Light 3day wt -0.27 >More info -0.55 >More info 0h wt Original data
258 35SAvr 0.13 >More info 0.68 >More info Ecotype Col Original data GEO bulk
259 Laer pretreat JA Flg22 1h 0.51 >More info 0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
260 Cotyledons -0.55 >More info -0.25 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
261 ms1 unpollinated -0.50 >More info -0.30 >More info WT 8h-pollinated pistil Original data GEO bulk
262 Homozygous-AtcesA6 0.27 >More info 0.53 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
263 Total RNA 35S:HF-RPL18 0.28 >More info 0.52 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
264 FLIGHT TAGESB plate6 ROOTS -0.29 >More info -0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
265 Distal half (leaf7) -0.55 >More info -0.24 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
266 msh1 recA3 untreated 0.16 >More info 0.63 >More info WT untreated above-ground parts Original data GEO bulk
267 WT Red light 18h -0.26 >More info -0.53 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
268 WT(Ler) Rc50 -0.28 >More info -0.51 >More info WT(Ler) Dark Original data GEO bulk
269 3x(m) -0.23 >More info -0.56 >More info 2x two week old seedlings Original data
270 L2.5 mutant -0.51 >More info -0.27 >More info Wt Original data GEO bulk
271 IAA Treated 0.26 >More info 0.52 >More info Negative Control Original data GEO bulk
272 cdpk6-yfp 0.25 >More info 0.53 >More info Kan seedlings Original data GEO bulk
273 Leaf -0.52 >More info -0.25 >More info Control for tissue data leaf Original data GEO bulk
274 Proximalhalf (leaf7) -0.55 >More info -0.22 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
275 ape2 high light -0.26 >More info -0.51 >More info Ws-2 high light Original data GEO bulk
276 T101D 10mM NH4NO3 0.22 >More info 0.55 >More info col 10mM NH4NO3 Root Original data
277 GR-bdl DEX IAA -0.22 >More info -0.54 >More info GR-bdl IAA Original data GEO bulk
278 max3GR24 (1 uM) 0.24 >More info 0.52 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
279 Col-0 SA 0.24 >More info 0.52 >More info Col-0 Original data GEO bulk
280 red illumination +lincomycin 0.20 >More info 0.56 >More info red illumination -lincomycin Original data GEO bulk
281 Apex octa 18DAS 0.51 >More info 0.24 >More info Apex Col 14DAS Original data GEO bulk
282 ALC Toc1 light-light EtOH -0.53 >More info -0.22 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
283 WT flg22 2h 0.50 >More info 0.25 >More info WT 0h Leaf tissue Original data GEO bulk
284 abh1 +ABA 0.21 >More info 0.54 >More info Col-0 +ABA Original data GEO bulk
285 sni1 0.24 >More info 0.50 >More info WT Original data GEO bulk
286 Rosette leaf No2 -0.51 >More info -0.22 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
287 low CO2 + light -0.18 >More info -0.55 >More info normal CO2 + light Original data GEO bulk
288 pmr4-1 powdery mildew 0.19 >More info 0.54 >More info WT powdery mildew uninoculated Original data GEO bulk
289 P-chlorophenoxy- isobutyric acid 3 h 0.16 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
290 Col laser microdissected 5 dpi 0.16 >More info 0.55 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
291 Starch sheath 2 days NAA 0.15 >More info 0.56 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
292 root epidermis and lateral root cap -S 0.17 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
293 Expanding leaf -0.51 >More info -0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
294 gpa1-4/agb1-2 clean-air 3h -0.55 >More info -0.15 >More info Col clean-air 3h clean-air Original data GEO bulk
295 Protoplast Induced -0.14 >More info -0.55 >More info Uninduced Original data GEO bulk
296 SA Treated 0.61 >More info 0.08 >More info Water Original data GEO bulk
297 triploid female excess 0.10 >More info 0.59 >More info tetraploid Original data GEO bulk
298 Shoot -P -0.55 >More info -0.12 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
299 ptpks2 -0.11 >More info 0.75 >More info Col-WT leaves Original data GEO bulk
300 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
301 sfr6 drought 0.12 >More info 0.51 >More info WT drought All aerial tissue Original data GEO bulk
302 Petiol (leaf7) -0.52 >More info -0.10 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
303 ANAC102 over-expressor 0.04 >More info 0.58 >More info C24 Original data GEO bulk
304 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
305 2hr transitory KNO3 ECR cell 0.07 >More info 0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
306 Col-0 V. longisporum-inoculated 48 hpi 0.10 >More info 0.50 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
307 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
308 pvip1 pvip2 seedling 0.59 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
309 AFB1 PSTDC3000 24h -0.50 >More info -0.05 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
310 Col-0 24hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
311 2hr continuous KNO3 ECR cell 0.01 >More info 0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
312 vte2 leaves 120h LT 0.50 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
313 Light 0.5h polysome-bound -0.02 >More info -0.50 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
314 myb61 xylem -0.00 >More info -0.52 >More info wt xylem xylem Original data GEO bulk
315 Light 3day hml -0.16 >More info 0.66 >More info 0h hml Original data
316 siliques AtHb1 control -0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
317 Shoot apex inflorescence (after bolting) -0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
318 Fei-0-30min IAA -0.03 >More info 0.51 >More info Fei-0-0h IAA whole plant Original data GEO bulk
319 FarRed Light 45min -0.21 >More info 0.68 >More info White Light 45min Original data Light treatments
320 Mutant sav3-2 (SH) 0.08 >More info -0.52 >More info Col-0 (SH) Original data GEO bulk
321 sav3-2 shade 0.08 >More info -0.52 >More info Col-0 shade seedlings Original data GEO bulk
322 P. infestans 6 h (leaf) 0.57 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
323 Ler KAR1 24h seed 0.13 >More info -0.54 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
324 WT 3h -P 0.52 >More info -0.13 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
325 bri1-116 -0.42 >More info 0.73 >More info Col seedling Original data GEO bulk
326 Red Light 45min -0.25 >More info 0.50 >More info White Light 45min Original data Light treatments