4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 4h decapitation
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List of experiments correlated with "4h decapitation"  Help Download transcriptome of top 30
Score Experiment Correlation from
4h decapitation		 Correlation to
4h decapitation		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 4h decapitation 1.00 >More info 1.00 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
2 low CO2 + light -0.79 >More info -0.76 >More info normal CO2 + light Original data GEO bulk
3 SCR-GR Time 1H Dex -0.63 >More info -0.80 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
4 low CO2 + dark -0.75 >More info -0.68 >More info normal CO2 + light Original data GEO bulk
5 tfl1-1-16ºC -0.76 >More info -0.65 >More info WT-16ºC Original data GEO bulk
6 WT (Col) glucose 0.71 >More info 0.69 >More info WT (Col) glucose seedlings Original data GEO bulk
7 detached inflorescences 24h -0.76 >More info -0.62 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
8 Col-7 Sucrose 0.74 >More info 0.63 >More info col-7 Original data GEO bulk
9 high-R:FR bud axillary 0.74 >More info 0.62 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
10 Shoot dark control 24h -0.78 >More info -0.55 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
11 Root dark control 24h -0.74 >More info -0.59 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
12 Shoot dark control 7h -0.80 >More info -0.51 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
13 Col-0 DCA 6d -0.69 >More info -0.62 >More info Col-0 MOCK 6d Original data GEO bulk
14 seedling 1.5h after HZE atm-1 -0.75 >More info -0.56 >More info seedling day 1 unirradiated atm-1 1.5h Original data
15 sfr6 drought 0.68 >More info 0.62 >More info WT drought All aerial tissue Original data GEO bulk
16 Col(gl) leaf 100mM NaCl -0.75 >More info -0.55 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
17 Col-0 INA 6d -0.68 >More info -0.62 >More info Col-0 MOCK 6d Original data GEO bulk
18 toc1-1-73hr -0.66 >More info -0.64 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
19 Col(gl) 100mM NaCl -0.75 >More info -0.55 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
20 Differentiation 36h 0.70 >More info 0.57 >More info Differentiation 0h leaves Original data
21 Shoot submergence 24h -0.80 >More info -0.47 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
22 Apex mir-3TCP 14DAS 0.72 >More info 0.55 >More info Apex Col 14DAS Original data GEO bulk
23 AmGSTF1 expressor -0.65 >More info -0.62 >More info WT leaf tissue Original data GEO bulk
24 sdg8-2 mutant 0.75 >More info 0.51 >More info wild type leaf Original data GEO bulk
25 Root submergence 24h -0.71 >More info -0.54 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
26 INA -0.55 >More info -0.69 >More info CK INA seedling Original data
27 Root dark control 7h -0.70 >More info -0.54 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
28 Inflorescence miR-NGA 0.73 >More info 0.50 >More info Inflorescence wt Original data GEO bulk
29 WT (Col-0) inflorescence drought day 5 -0.70 >More info -0.53 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
30 E.orontii Infection 6 h -0.66 >More info -0.57 >More info Uninfection 6 h Original data Elicitor treatments
31 rosette leaves fdh -0.70 >More info -0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
32 3x(p) -0.62 >More info -0.61 >More info 2x two week old seedlings Original data
33 Nicotinamide-49hr -0.70 >More info -0.52 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
34 seedling 24h after Gamma WT 0.57 >More info 0.65 >More info seedling day 2 unirradiated WT 24h Original data
35 Differentiation 24h 0.70 >More info 0.52 >More info Differentiation 0h leaves Original data
36 35S::MBF1c -0.64 >More info -0.57 >More info control Original data GEO bulk
37 GST 4 h (leaf) -0.70 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
38 npr1 sni1 ssn2 0.64 >More info 0.56 >More info npr1 sni1 water water seedling Original data GEO bulk
39 Root submergence 7h -0.71 >More info -0.49 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
40 roots bhlh100/101 0uM Fe -0.66 >More info -0.53 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
41 Night Time Treatment 0.67 >More info 0.52 >More info Night Time Control 1hr white light pulse aerial rosette Original data
42 Elevated CO2 expanding leaf -0.63 >More info -0.56 >More info Ambient CO2 expanding leaf expanding leaf Original data
43 Col-0 (t-zeatin 3 h) 0.54 >More info 0.64 >More info Col-0 Original data Cytokinin treatment of seedlings
44 eds16 whole leaf 0h UI 0.45 >More info 0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
45 pepr1-1 Pepr2-3 +Pep2 10h 0.76 >More info 0.40 >More info WT +Pep2 10h Pep2 Original data GEO bulk
46 camta1/3 warm -0.68 >More info -0.48 >More info WT warm entire aerial part Original data GEO bulk
47 camta1-2 -0.62 >More info -0.54 >More info Col-0-WT Original data GEO bulk
48 Nicotinamide-65hr -0.77 >More info -0.39 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
49 Differentiation 48h 0.66 >More info 0.50 >More info Differentiation 0h leaves Original data
50 CHLM overexpression 0.70 >More info 0.46 >More info Col-0 estr green tissue Original data GEO bulk
51 PNO8 12 h -0.61 >More info -0.54 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
52 Col ozone 3h -0.61 >More info -0.54 >More info Col clean-air 3h ozone Original data GEO bulk
53 edr1 36 h powdery mildew -0.68 >More info -0.47 >More info Col-0 36 h powdery mildew Original data GEO bulk
54 tor mutant glucose -0.65 >More info -0.50 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
55 root epidermis and lateral root cap -S 0.45 >More info 0.70 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
56 max3GR24 (1 uM) 0.55 >More info 0.59 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
57 camta3-2 -0.59 >More info -0.55 >More info WT Original data GEO bulk
58 camta2/3 warm -0.68 >More info -0.46 >More info WT warm entire aerial part Original data GEO bulk
59 cpr5scv1 -0.68 >More info -0.46 >More info WT(COL) Original data GEO bulk
60 essp4/sdg8-5 mutant 0.68 >More info 0.46 >More info wild type leaf Original data GEO bulk
61 sid2-1 cold 0.61 >More info 0.53 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
62 Nicotinamide-73hr -0.76 >More info -0.38 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
63 ABA JA 24h -0.42 >More info -0.72 >More info EtOH 24h 24hr Original data GEO bulk
64 CMV-WT -0.67 >More info -0.46 >More info Mock-At Aerial tissues Original data GEO bulk
65 WUS-GR DEX -0.61 >More info -0.52 >More info Mock Dexamethasone Original data GEO bulk
66 WT-16ºC 0.72 >More info 0.41 >More info WT-23ºC Original data GEO bulk
67 spch -0.70 >More info -0.43 >More info Col-0 WT whole seedling Original data GEO bulk
68 penta mutant (higher order mutant) -0.63 >More info -0.50 >More info col control (higher order mutant) Original data GEO bulk
69 WT AntimycinA 3h -0.73 >More info -0.40 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
70 root longitudinal zone-1 low sulfur 0.49 >More info 0.64 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
71 Bay-0-3h IAA -0.72 >More info -0.40 >More info Bay-0-0h IAA whole plant Original data GEO bulk
72 eds16 whole leaf 6hpi 0.53 >More info 0.59 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
73 CAX1/CAX3 mutant -0.72 >More info -0.40 >More info Col whole plant Original data GEO bulk
74 seedling 24h after Gamma atm-1 0.54 >More info 0.58 >More info seedling day 2 unirradiated atm-1 24h Original data
75 OE WRKY63.3 high light -0.58 >More info -0.54 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
76 etr1 1% sucrose 12-day-old 0.50 >More info 0.61 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
77 HARAP aerobic 0.69 >More info 0.42 >More info WT aerobic aerobic Original data GEO bulk
78 cngc4 -0.69 >More info -0.42 >More info Ws-2 Seedlings Original data GEO bulk
79 Octopus overexpressor 35SDYG25 -0.62 >More info -0.49 >More info WS Original data GEO bulk
80 cov1 cov2 stem Base -0.60 >More info -0.50 >More info WT stem Base stem Base Original data GEO bulk
81 msg2-BR 0.59 >More info 0.51 >More info BR BR dark-grown seedlings Original data GEO bulk
82 Differentiation 12h 0.61 >More info 0.49 >More info Differentiation 0h leaves Original data
83 atmyc2 Seedling BL -0.44 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
84 bak1-3 +Pep2 10h -0.67 >More info -0.42 >More info WT +Pep2 10h Pep2 Original data GEO bulk
85 short 17-degree- 0.41 >More info 0.68 >More info control short Original data GEO bulk
86 UV Stress 24 h (shoot) -0.60 >More info -0.49 >More info Stress mock 24 h (shoot) Original data Stress treatments
87 camta1/2/3 warm -0.73 >More info -0.36 >More info WT warm entire aerial part Original data GEO bulk
88 +1.6 mM Tween 20 1 h. -0.60 >More info -0.49 >More info +distilled water 1 h. Original data GEO bulk
89 Inflorescence ngaquad 0.62 >More info 0.46 >More info Inflorescence wt Original data GEO bulk
90 phr1 Shoot-Pi -0.51 >More info -0.57 >More info WT Root-Pi shoots Original data GEO bulk
91 KO-nudx19 leaves -0.57 >More info -0.51 >More info WT leaves rosette leaves Original data
92 sni1 -0.56 >More info -0.52 >More info WT Original data GEO bulk
93 Nicotinamide-69hr -0.73 >More info -0.35 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
94 WT+sucrose 0.56 >More info 0.52 >More info WT+no sugars rosette leaves Original data GEO bulk
95 axr2 0.62 >More info 0.45 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
96 dorn1-1 Root 100 mM ATP 30 min 0.55 >More info 0.52 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
97 Dark 6h ivd -0.71 >More info -0.36 >More info 0h ivd Original data
98 4d red light grown hmr-5 seedlings -0.69 >More info -0.38 >More info 4d red light grown WT(Col-0) seedlings Original data
99 GV3101 3hpi -0.50 >More info -0.56 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
100 seedling 1.5h after HZE WT -0.71 >More info -0.35 >More info seedling day 1 unirradiated WT 1.5h Original data
101 Col whole leaf 5 dpi -0.52 >More info -0.54 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
102 epiF3 0.56 >More info 0.50 >More info WT Col-0 aerial part Original data
103 WT H2O2 3h -0.62 >More info -0.43 >More info WT water 3h 3h_H2O2 Original data GEO bulk
104 pepr1-1 Pepr2-3 +Pep2 2h 0.71 >More info 0.34 >More info WT +Pep2 2h Pep2 Original data GEO bulk
105 elf3-7-16ºC 0.60 >More info 0.45 >More info WT-16ºC Original data GEO bulk
106 rGRF3x35S:GIF -0.58 >More info -0.47 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
107 AFB1 0h -0.65 >More info -0.39 >More info Col 0h Leaf Original data GEO bulk
108 20d after anthesis -0.54 >More info -0.50 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
109 Nicotinamide-93hr -0.72 >More info -0.32 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
110 Whole root - S 3H 0.55 >More info 0.49 >More info Whole root - S 0H Original data GEO bulk
111 cov1 cov2 stem Top 0.63 >More info 0.41 >More info WT stem Top stem Top Original data GEO bulk
112 ape2 high light -0.44 >More info -0.60 >More info Ws-2 high light Original data GEO bulk
113 pab polysome 0.53 >More info 0.50 >More info WT polysome seedling shoot/aerial seedling Original data
114 A. halleri control-leaf -0.54 >More info -0.49 >More info A. petraea control-leaf Original data GEO bulk
115 root stele 40 mM NaCls -0.55 >More info -0.48 >More info root stele Original data GEO bulk
116 A. thaliana-A. lyrata hybrid 0.62 >More info 0.41 >More info A. thaliana mature leaves before flowering Original data GEO bulk
117 BLM+INA -0.50 >More info -0.53 >More info CK BLM and INA seedling Original data
118 eif3h polysome 0.57 >More info 0.46 >More info WT polysome Original data GEO bulk
119 FLIGHT TAGESB plate6 SHOOTS -0.60 >More info -0.43 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
120 aintegumenta-1 0.58 >More info 0.45 >More info Col-0 Original data GEO bulk
121 axr2-BR 0.67 >More info 0.36 >More info BR BR dark-grown seedlings Original data GEO bulk
122 Mutant bri1 -0.43 >More info -0.60 >More info Ws-2 Original data Comparison of plant hormone related mutant
123 cpr5 -0.51 >More info -0.51 >More info WT(COL) Original data GEO bulk
124 WT zebularine 0.62 >More info 0.40 >More info WT mock shoot apical meristem Original data
125 an3-4 leaf primordia -0.60 >More info -0.42 >More info WT leaf primordia Original data GEO bulk
126 tcp14 -0.64 >More info -0.38 >More info WT inflorescences Original data GEO bulk
127 AAF-OX -0.55 >More info -0.47 >More info Col-0 Rosette leaf Original data GEO bulk
128 tZ 0.60 >More info 0.42 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
129 Heat no recovery 0.55 >More info 0.46 >More info Mock no recovery seedling Original data GEO bulk
130 Drought Stress 24 h (shoot) -0.51 >More info -0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
131 ARR22-ox 0.53 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
132 hepta mutant (higher order mutant) -0.69 >More info -0.32 >More info col control (higher order mutant) Original data GEO bulk
133 cca1-lhy before light -0.38 >More info -0.63 >More info before light whole seedlings Original data GEO bulk
134 root stele -S 0.38 >More info 0.63 >More info root stele pH5.7 Original data GEO bulk
135 Col-0 WT HL 3h 0.57 >More info 0.43 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
136 Col-0 red light 0.56 >More info 0.44 >More info Col-0 dark Original data GEO bulk
137 35S:GIF -0.56 >More info -0.44 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
138 rGRF -0.62 >More info -0.38 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
139 glk1 glk2 GLK1-GR +DEX 4h -0.67 >More info -0.33 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
140 Prohexadione 3 h -0.40 >More info -0.60 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
141 ein2 1% sucrose 14-day-old 0.44 >More info 0.56 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
142 WT (Col-0) inflorescence drought day 10 -0.57 >More info -0.42 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
143 gun4-1 -0.58 >More info -0.41 >More info WT Col-0 seedling Original data GEO bulk
144 sfr2 cold -0.55 >More info -0.44 >More info WT cold All aerial tissue Original data GEO bulk
145 eds16 whole leaf 5dpi 0.45 >More info 0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
146 toc1-1-77hr -0.45 >More info -0.54 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
147 edr1 18 h powdery mildew -0.46 >More info -0.53 >More info Col-0 18 h powdery mildew Original data GEO bulk
148 WT polysome 0.41 >More info 0.58 >More info WT non-polysome Original data GEO bulk
149 wavy -0.51 >More info -0.47 >More info WT Original data GEO bulk
150 M6PR transgenic 100mM NaCl -0.50 >More info -0.48 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
151 MYB29 OE 0.53 >More info 0.45 >More info WT for MYB29/76 Original data GEO bulk
152 COL-0-Fe--shoot 0.59 >More info 0.39 >More info COL-0-Ctrl--shoot shoot Original data
153 toc1-1-53hr -0.56 >More info -0.42 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
154 vte1-1 3d vernalization 0.56 >More info 0.41 >More info WT 3d vernalization Original data GEO bulk
155 sex1-3 -0.65 >More info -0.32 >More info Col-WT leaves Original data GEO bulk
156 cpr5npr1 -0.52 >More info -0.45 >More info WT(COL) Original data GEO bulk
157 Whole root - S 12H 0.57 >More info 0.40 >More info Whole root - S 0H Original data GEO bulk
158 ptpks2 0.24 >More info 0.73 >More info Col-WT leaves Original data GEO bulk
159 OE WRKY40.4 0.36 >More info 0.61 >More info OE WRKY40.4 none leaf Original data GEO bulk
160 Dex-rga(delta17) 4h GA4 0.54 >More info 0.42 >More info Vector 4h GA4 shoots Original data GEO bulk
161 8h-DC3000 avrRpm1 -0.53 >More info -0.43 >More info 8h-DC3000 leaves Original data GEO bulk
162 Uniconazole 12 h -0.69 >More info -0.27 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
163 leaf blade in D -0.65 >More info -0.31 >More info leaf blade in WL leaf blades Original data GEO bulk
164 phyB mutant 22C 10hrs 0.30 >More info 0.66 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
165 arr10 arr12 tZ -0.45 >More info -0.51 >More info WT tZ Original data GEO bulk
166 Sha-3h IAA -0.63 >More info -0.32 >More info Sha-0h IAA whole plant Original data GEO bulk
167 Root P recovery -0.66 >More info -0.29 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
168 Col-0 C2H4 24h -0.69 >More info -0.26 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
169 short 12-degree- 0.24 >More info 0.71 >More info control short Original data GEO bulk
170 cca1-lhy 30m light -0.39 >More info -0.55 >More info 30m light whole seedlings Original data GEO bulk
171 irradiated leaf (WT 5d) 0.40 >More info 0.54 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
172 6h volatiles Sp. HRO-C48 -0.63 >More info -0.31 >More info 6h untreated whole seedling Original data GEO bulk
173 Ovary 0.59 >More info 0.35 >More info Seedling Original data GEO bulk
174 eif3h non-polysome 0.52 >More info 0.42 >More info WT non-polysome Original data GEO bulk
175 M6PR transgenic 0mM NaCl -0.57 >More info -0.37 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
176 vtc2 (I) -0.50 >More info -0.44 >More info Col (I) rosette Original data GEO bulk
177 16C 10h 0.59 >More info 0.35 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
178 ein2-1 +elf18 2h 0.52 >More info 0.42 >More info WT +elf18 2h elf18 Original data GEO bulk
179 Dex-rga(delta17) 2h GA4 0.51 >More info 0.43 >More info Vector 4h GA4 shoots Original data GEO bulk
180 WT (Col-0) inflorescence drought day 4 -0.60 >More info -0.34 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
181 anti-sense for AtAOX1a -0.53 >More info -0.40 >More info WT Original data GEO bulk
182 lec2-1 8 DAF Seed 0.53 >More info 0.40 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
183 hexa mutant (higher order mutant) -0.57 >More info -0.36 >More info col control (higher order mutant) Original data GEO bulk
184 FLIGHT TAGES 2B plate6 HYPOCOTYLS -0.64 >More info -0.29 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
185 SHR-GR Time 12H Dex 0.42 >More info 0.51 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
186 pil5 red light -0.65 >More info -0.27 >More info Col-0 red light Original data GEO bulk
187 tfl1-1-23ºC -0.64 >More info -0.28 >More info WT-23ºC Original data GEO bulk
188 pif4pif5 mut 1h FR 0.65 >More info 0.27 >More info WT 1h FR Original data GEO bulk
189 seedlings-week-old RECA1-overexpressing
transgenic		 -0.66 >More info -0.26 >More info seedlings-week-old Col-0 seedlings Original data
190 M6PR transgenic leaf 100mM NaCl -0.59 >More info -0.33 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
191 t-zeatin 3 h 0.51 >More info 0.41 >More info Mock 3 h Original data Basic hormone treatment of seedlings
192 ATR1 OE -0.51 >More info -0.41 >More info WT for ATR1/MYB51 Original data GEO bulk
193 Laer pretreat JA Flg22 0h 0.30 >More info 0.62 >More info Laer pretreat water control leaf discs Original data GEO bulk
194 hog1-7 0.55 >More info 0.36 >More info wt whole seedling Original data GEO bulk
195 OH1 -0.56 >More info -0.35 >More info Col-0 leaves Original data GEO bulk
196 petiole in D -0.63 >More info -0.28 >More info petiole in WL petioles Original data GEO bulk
197 mutant-line774 0.55 >More info 0.36 >More info WT-control whole plant Original data GEO bulk
198 Mutant iaa5_6_19 0.35 >More info 0.56 >More info Col Original data GEO bulk
199 SA 4mM -0.36 >More info -0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
200 Full AC2 T1 0.50 >More info 0.41 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
201 gabaculin -0.50 >More info -0.41 >More info WT Col-0 seedling Original data GEO bulk
202 Osmotic Stress 24 h (root) -0.50 >More info -0.41 >More info Stress mock 24 h (root) Original data Stress treatments
203 Roots Cd 0.29 >More info 0.62 >More info Roots control Cd Root Original data GEO bulk
204 dsr1 -0.56 >More info -0.34 >More info WT mock Whole seedling Original data GEO bulk
205 Bay-0-30min IAA -0.63 >More info -0.27 >More info Bay-0-0h IAA whole plant Original data GEO bulk
206 AtMinD1 Prolonged-induction -0.65 >More info -0.25 >More info Control whole plant Original data GEO bulk
207 16C 4hs 0.39 >More info 0.51 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
208 Dark 1day hml -0.57 >More info -0.33 >More info 0h hml Original data
209 piffq FR 3h 0.59 >More info 0.31 >More info WT FR 3h whole seedling Original data GEO bulk
210 WT mitomycin C 0.58 >More info 0.32 >More info WT mock shoot apical meristem Original data
211 cpr5npr1svi1 -0.56 >More info -0.33 >More info WT(COL) Original data GEO bulk
212 long 10-degree- 0.52 >More info 0.37 >More info control long Original data GEO bulk
213 sfr6 control 0.63 >More info 0.26 >More info WT control All aerial tissue Original data GEO bulk
214 oligomycin 1 h -0.54 >More info -0.35 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
215 npr1-3 DCA 48h -0.39 >More info -0.50 >More info npr1-3 MOCK 48h Original data GEO bulk
216 Col-0 0h NAA -0.38 >More info -0.51 >More info Col-0 6h MOCK Original data GEO bulk
217 Leaf -0.56 >More info -0.32 >More info Control for tissue data leaf Original data GEO bulk
218 vtc2-1 0.53 >More info 0.35 >More info Col-0 whole plant Original data GEO bulk
219 Dark 6h hml -0.60 >More info -0.28 >More info 0h hml Original data
220 Dark 1day wt -0.60 >More info -0.28 >More info 0h wt Original data
221 rosette Dark Wounded 0.36 >More info 0.52 >More info rosette Dark Control Original data GEO bulk
222 SOS1 100mM NaCl -0.36 >More info -0.52 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
223 CHLD reduction 0.58 >More info 0.30 >More info Col-0 dex green tissue Original data GEO bulk
224 Col-0 INA 48h -0.31 >More info -0.57 >More info Col-0 MOCK 48h Original data GEO bulk
225 piffq FR 1h 0.54 >More info 0.33 >More info WT FR 1h whole seedling Original data GEO bulk
226 long 12-degree- 0.50 >More info 0.37 >More info control long Original data GEO bulk
227 Dark 6h wt -0.59 >More info -0.28 >More info 0h wt Original data
228 short 14-degree- 0.37 >More info 0.50 >More info control short Original data GEO bulk
229 ago1-27 -0.52 >More info -0.34 >More info Col-0 vegetative apex Original data GEO bulk
230 cdm1 mutant floral young floral buds 0.66 >More info 0.20 >More info WT floral yound floral buds Unopen flower buds Original data
231 mutant-line1135 0.53 >More info 0.33 >More info WT-control whole plant Original data GEO bulk
232 ddm1-12 0.53 >More info 0.33 >More info wt whole seedling Original data GEO bulk
233 tcp13 -0.61 >More info -0.25 >More info WT inflorescences Original data GEO bulk
234 35S:RPS4 eds1-2 T0 0.29 >More info 0.57 >More info 35S:RPS4 T0 leaves Original data
235 ein2-1 +Pep2 2h 0.53 >More info 0.32 >More info WT +Pep2 2h Pep2 Original data GEO bulk
236 iron minus 0 h -0.54 >More info -0.31 >More info iron +0 h root Original data GEO bulk
237 4d red light grown hmr-22 seedlings -0.64 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
238 Osmotic Stress 24 h (shoot) -0.54 >More info -0.30 >More info Stress mock 24 h (shoot) Original data Stress treatments
239 tbf1-SA 0.50 >More info 0.34 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
240 dyt1 0.53 >More info 0.31 >More info WT anther Original data GEO bulk
241 elf3-7-23ºC 0.66 >More info 0.18 >More info WT-23ºC Original data GEO bulk
242 atmospheric CO2 low Mg shoot -0.55 >More info -0.29 >More info atmospheric CO2 normal Mg shoot Shoot Original data
243 Cauline leaves -0.52 >More info -0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
244 FarRed Light 45min -0.32 >More info -0.52 >More info White Light 45min Original data Light treatments
245 seed germinating in countinuous light 24h SL 0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
246 stele pSHR 3h BL -0.58 >More info -0.26 >More info stele pSHR 0h BL brassinosteroid root Original data
247 Nicotinamide-89hr -0.62 >More info -0.22 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
248 efr-1 +elf18 10h 0.67 >More info 0.16 >More info WT +elf18 10h elf18 Original data GEO bulk
249 0h light (+Lincomycin) 0.51 >More info 0.32 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
250 agb1 +ABA GC -0.16 >More info -0.67 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
251 Transgenic LEC2GR Seedling 1h Dex 0.33 >More info 0.50 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
252 35S:LOB-GR DEX 0.50 >More info 0.32 >More info Col DEX dexamethasone seedling Original data GEO bulk
253 6 h SL WT 0.50 >More info 0.32 >More info 0 h WT seed Original data
254 nbp35-3/- -0.64 >More info -0.18 >More info WT whole seedling Original data GEO bulk
255 Propiconazole 12 h -0.52 >More info -0.30 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
256 Pseudomonas -0.55 >More info -0.27 >More info Control pseudomonas treated whole seedling Original data GEO bulk
257 leaf blade in FRD -0.55 >More info -0.27 >More info leaf blade in WL leaf blades Original data GEO bulk
258 root - 04% oxygen - 48h 0.30 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
259 Dark 1day ivd -0.57 >More info -0.25 >More info 0h ivd Original data
260 Light 4h steady-state 0.60 >More info 0.22 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
261 Dark 3day wt -0.57 >More info -0.25 >More info 0h wt Original data
262 pmr4-1 powdery mildew -0.59 >More info -0.23 >More info WT powdery mildew uninoculated Original data GEO bulk
263 mutant acs2C (single mutant) -0.54 >More info -0.27 >More info col control (single mutant) Original data GEO bulk
264 OE WRKY63.3 -0.53 >More info -0.28 >More info OE WRKY40.4 none leaf Original data GEO bulk
265 Dark 2day hml -0.54 >More info -0.27 >More info 0h hml Original data
266 Dark 2day wt -0.56 >More info -0.25 >More info 0h wt Original data
267 ABA SA 24h -0.07 >More info -0.74 >More info EtOH 24h 24hr Original data GEO bulk
268 Dark 3day hml -0.59 >More info -0.22 >More info 0h hml Original data
269 CMP 4hr -0.58 >More info -0.23 >More info Acetone 4hr root Original data GEO bulk
270 gun5 norflurazon -0.58 >More info -0.23 >More info gun5 control Original data GEO bulk
271 mkk1 24h BTH rep -0.52 >More info -0.28 >More info Col-0 24h BTH rep Original data GEO bulk
272 Elevated CO2 AMPLE N DAY -0.27 >More info -0.53 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
273 Nicotinamide-53hr -0.59 >More info -0.21 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
274 ADD3 0.52 >More info 0.27 >More info WT aerial part Original data GEO bulk
275 coi1-2 -0.52 >More info -0.27 >More info Col-0 mock Whole seedling Original data GEO bulk
276 pGL1::GL1-GR Dex 24hours -0.50 >More info -0.29 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
277 Mutant siz1-3 (Drought) -0.52 >More info -0.27 >More info Col-0 (Drought) Original data GEO bulk
278 camta1/2/3 24h cold -0.62 >More info -0.17 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
279 ein2 mutant roots IAA 0.55 >More info 0.24 >More info roots ethylene Original data GEO bulk
280 siz1-3 drought -0.52 >More info -0.27 >More info Col-0 drought Original data GEO bulk
281 Salt Stress 24 h (root) -0.52 >More info -0.27 >More info Stress mock 24 h (root) Original data Stress treatments
282 A2hsfa1-ox in quadruple mutant 0.50 >More info 0.28 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
283 Shoot submergence 7h -0.78 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
284 AtMinD1 Temporal-induction -0.54 >More info -0.24 >More info Control whole plant Original data GEO bulk
285 WT hypoxia -0.53 >More info -0.25 >More info WT normoxia whole rosette Original data
286 24h SL WT 0.56 >More info 0.22 >More info 0 h WT seed Original data
287 ALC Toc1 light-dark EtOH 0.52 >More info 0.26 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
288 CMV-A2b mutant -0.51 >More info -0.27 >More info Mock-At Aerial tissues Original data GEO bulk
289 gai Flg22 2h -0.52 >More info -0.26 >More info Laer Flg22 2h leaf discs Original data GEO bulk
290 E.orontii Infection 3 day -0.28 >More info -0.50 >More info Uninfection 3 day Original data Elicitor treatments
291 21h-DC3000 hrpA 0.22 >More info 0.56 >More info 21h-DC3000 leaves Original data GEO bulk
292 21h-DC3000 avrRpm1 0.23 >More info 0.55 >More info 21h-DC3000 leaves Original data GEO bulk
293 Inflorescences Trp1 0.20 >More info 0.58 >More info Inflorescences ler inflorescences Original data GEO bulk
294 Nicotinamide-61hr -0.54 >More info -0.23 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
295 ein2-1 +elf18 10h 0.53 >More info 0.24 >More info WT +elf18 10h elf18 Original data GEO bulk
296 1 h Light Total RNA 0.50 >More info 0.27 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
297 npr1 sni1 SA -0.58 >More info -0.19 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
298 AgNO3 3 h -0.56 >More info -0.21 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
299 til1-1 22C -0.56 >More info -0.21 >More info Col-0 22C Original data GEO bulk
300 root - 01% oxygen - 30min 0.22 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
301 mutant acs9B (single mutant) -0.55 >More info -0.21 >More info col control (single mutant) Original data GEO bulk
302 exo70A1 -0.53 >More info -0.23 >More info Col-0 whole plant Original data GEO bulk
303 AtMYB30-ox T0 0.59 >More info 0.17 >More info WT T0 Original data GEO bulk
304 stn7-1 0.25 >More info 0.51 >More info Col-0 rosette leaves Original data GEO bulk
305 WT +elf18 2h -0.51 >More info -0.24 >More info WT untreated elf18 Original data GEO bulk
306 8hr-pH4.5 -0.51 >More info -0.24 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
307 tga2 tga5 tga6 ctrl 0.51 >More info 0.24 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
308 Light 4h polysome-bound 0.59 >More info 0.16 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
309 petiole in FRD -0.57 >More info -0.18 >More info petiole in WL petioles Original data GEO bulk
310 Sha-30min IAA -0.53 >More info -0.22 >More info Sha-0h IAA whole plant Original data GEO bulk
311 Heat 2 days recovery -0.52 >More info -0.23 >More info Mock 2 days recovery seedling Original data GEO bulk
312 Shoot apex inflorescence (after bolting) 0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
313 oligomycin 4 h -0.56 >More info -0.18 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
314 Cocultivation 8 hrs leaf -0.50 >More info -0.24 >More info Mock cocultivation 8 hrs leaf Leaf Original data
315 Seedling-control POLYSOMESmRNA 0.18 >More info 0.56 >More info Seedling-control TOTALmRNA seedling Original data
316 dde2-2 9 hpi A. brassicicola -0.52 >More info -0.21 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
317 ms35 silique stage 9.10 0.53 >More info 0.20 >More info Ler 8.9.10 anther and filament Original data GEO bulk
318 ein3 eil1 JA 0.55 >More info 0.18 >More info JA Whole seedling Original data GEO bulk
319 UV Stress 24 h (root) -0.51 >More info -0.22 >More info Stress mock 24 h (root) Original data Stress treatments
320 24h SL Attim 17-1 1 0.54 >More info 0.19 >More info 0 h Attim 17-1 1 seed Original data
321 WT 30μM arsenate 8 hours. -0.51 >More info -0.22 >More info WT control (not supplemented). Original data
322 Var2-1 roots 2hr KNO3 nitrogen -0.51 >More info -0.22 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
323 epfl4 epfl6 0.58 >More info 0.15 >More info WT developing inflorescence tips Original data GEO bulk
324 C58 6dpi 0.55 >More info 0.17 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
325 bri1-116 -0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
326 gpa1 +ABA LF -0.53 >More info -0.18 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
327 ahg2-1 0.52 >More info 0.19 >More info WT (Col) control Original data GEO bulk
328 seedling 3h after HZE WT -0.73 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
329 Paclobutrazol 12 h -0.59 >More info -0.12 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
330 phyABDE Rc50 0.53 >More info 0.18 >More info phyABDE Dark red light whole seedling Original data GEO bulk
331 Leafminer systemically damaged thaliana seedlings -0.51 >More info -0.20 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
332 ga1-3 SCL3OE 0.51 >More info 0.20 >More info ga1-3 whole root Original data
333 35S:RPS4 eds1-2 24h 0.53 >More info 0.17 >More info 35S:RPS4 24h leaves Original data
334 IAA Treated 0.50 >More info 0.20 >More info Negative Control Original data GEO bulk
335 C24-3h IAA -0.55 >More info -0.14 >More info C24-0h IAA whole plant Original data GEO bulk
336 mkk1 control rep 0.17 >More info 0.52 >More info Col-0 Time 0 rep Original data GEO bulk
337 ABA+DMTU -0.17 >More info -0.52 >More info control Original data GEO bulk
338 gai Flg22 1h -0.50 >More info -0.19 >More info Laer Flg22 1h leaf discs Original data GEO bulk
339 elevated CO2 normal Mg root 0.52 >More info 0.16 >More info atmospheric CO2 normal Mg root Root Original data
340 ABA 3h 0.53 >More info 0.14 >More info EtOH 3h 3hr Original data GEO bulk
341 NahG 0.04 >More info 0.63 >More info Col-0 Leaves Original data GEO bulk
342 myb triple mutant 8h-pollinated ms1 -0.58 >More info -0.09 >More info WT 8h-pollinated pistil Original data GEO bulk
343 phyB mutant 16C 4hrs -0.60 >More info -0.07 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
344 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
345 Mutant NahG(leaf) 0.12 >More info 0.54 >More info Col-0 (leaf) Original data GEO bulk
346 pad4-PsmES4326-24hpi 0.58 >More info 0.08 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
347 TaFLS overexpression line (OE1) 0.51 >More info 0.14 >More info Col-0 Rosette leaves Original data
348 6h +Pi 0.52 >More info 0.13 >More info 6h -Pi root Original data GEO bulk
349 ABA 24h -0.13 >More info -0.51 >More info EtOH 24h 24hr Original data GEO bulk
350 phyB Rc50 -0.50 >More info -0.13 >More info WT(Ler) Rc50 Original data GEO bulk
351 red illumination +lincomycin 0.12 >More info 0.51 >More info red illumination -lincomycin Original data GEO bulk
352 Col-0 under 4 days salt -0.53 >More info -0.09 >More info Col-0 under control 4 days salt treatment rosette Original data
353 estradiole-induced ANAC059 0.50 >More info 0.11 >More info transgenic (empty vector inducible system) Original data GEO bulk
354 IAA 3 h -0.51 >More info -0.10 >More info Mock 3 h Original data Basic hormone treatment of seedlings
355 anac017-2 AntimycinA 3h 0.56 >More info 0.04 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
356 npr1 sni1 brca2a 0.61 >More info -0.03 >More info npr1 sni1 water water seedling Original data GEO bulk
357 HairpinZ 4 h (leaf) -0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
358 mkk1/mkk2 24h BTH rep -0.55 >More info 0.00 >More info Col-0 24h BTH rep Original data GEO bulk
359 Heat shock optimum -0.10 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
360 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
361 siliques WT hypoxia -0.55 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
362 Dark 3day ivd -0.54 >More info -0.00 >More info 0h ivd Original data
363 CT101 ozone -0.53 >More info 0.02 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
364 12h-DC3000 avrRpm1 -0.58 >More info 0.07 >More info 12h-DC3000 leaves Original data GEO bulk
365 15m.KCl -0.55 >More info 0.05 >More info To. KCl 14 day old Roots Original data GEO bulk
366 WT Red light 18h 0.55 >More info -0.06 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
367 CMP 24hr -0.58 >More info 0.09 >More info Acetone 24hr root Original data GEO bulk
368 glk1 glk2 GLK1-GR +DEX 24h 0.62 >More info -0.13 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
369 root - 04% oxygen - 2h -0.20 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
370 coi1-16 ein2 sid2 ozone -0.55 >More info 0.09 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
371 C24 ozone -0.52 >More info 0.06 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
372 Total RNA 35S:HF-RPL18 cold -0.59 >More info 0.13 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
373 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.53 >More info 0.08 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
374 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
375 PstDC3000 48h 0.23 >More info -0.51 >More info WT untreated 48hr leaf Original data GEO bulk
376 Light 3day hml 0.28 >More info -0.53 >More info 0h hml Original data
377 Mutant sav3-2 (WL) 0.32 >More info -0.52 >More info Col-0 (WL) Original data GEO bulk
378 siliques AtHb1 control -0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
379 sav3-2 light 0.32 >More info -0.52 >More info Col-0 light seedlings Original data GEO bulk
380 Col0-PsmES4326-24hpi -0.46 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
381 Leafminer damaged seedlings -0.43 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
382 Col BTH -0.55 >More info 0.67 >More info Col rosettes Original data GEO bulk