4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Stem tissue 5 days NAA
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List of experiments correlated with "Stem tissue 5 days NAA"  Help Download transcriptome of top 30
Score Experiment Correlation from
Stem tissue 5 days NAA		 Correlation to
Stem tissue 5 days NAA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Stem tissue 5 days NAA 1.00 >More info 1.00 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
2 Cambium 5 days NAA 0.93 >More info 0.90 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
3 Stem tissue 2 days NAA 0.80 >More info 0.91 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
4 Starch sheath 2 days NAA 0.70 >More info 0.75 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
5 tumour 0.70 >More info 0.67 >More info non-tumor tumour Original data GEO bulk
6 Starch sheath 2 days MS incubation 0.64 >More info 0.69 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
7 pnp1-1 3h +P 0.71 >More info 0.58 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
8 Starch sheath 5 days MS incubation 0.57 >More info 0.72 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
9 hrpA fliC 7h 0.61 >More info 0.68 >More info Mock 7h hrpA fliC Original data GEO bulk
10 Aerobic e1 ate2 0.57 >More info 0.72 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
11 C58 35dpi 0.65 >More info 0.63 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
12 Aerobic prt6 0.60 >More info 0.65 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
13 B.cinerea 18 h infection 0.51 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
14 Botrytis cinerea 18h 0.51 >More info 0.74 >More info control 18h Original data GEO bulk
15 msh1 albino 0.66 >More info 0.58 >More info WT aerial part Original data GEO bulk
16 Differentiation 12h 0.64 >More info 0.60 >More info Differentiation 0h leaves Original data
17 GV3101 6dpi 0.72 >More info 0.52 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
18 C58 6dpi 0.74 >More info 0.49 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
19 Col whole leaf 7dpi 0.57 >More info 0.65 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
20 mkk1/mkk2 control rep 0.65 >More info 0.57 >More info Col-0 Time 0 rep Original data GEO bulk
21 pnp1-1 1wk +P 0.72 >More info 0.48 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
22 MPK6 ox Shoot Hypoxia 0.47 >More info 0.73 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
23 Col BTH 0.51 >More info 0.67 >More info Col rosettes Original data GEO bulk
24 smg7b-1 0.56 >More info 0.62 >More info WT whole plant Original data GEO bulk
25 pvip1 pvip2 0.65 >More info 0.52 >More info Col-0 whole rosettes Original data GEO bulk
26 PAHs stress 0.65 >More info 0.52 >More info exp control phenanthrene whole plants Original data GEO bulk
27 cpr5 0.60 >More info 0.56 >More info WT seedling Original data GEO bulk
28 cpr5 0.59 >More info 0.57 >More info WT(COL) Original data GEO bulk
29 S15-118 0.59 >More info 0.57 >More info wt Original data GEO bulk
30 E.coli TUV86 2 fliC 7h 0.61 >More info 0.54 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
31 albino Ds13-2198-1 -0.66 >More info -0.49 >More info control Original data GEO bulk
32 seedlings-week-old RECA1-overexpressing
transgenic		 0.59 >More info 0.56 >More info seedlings-week-old Col-0 seedlings Original data
33 aerial organ callus inducing medium 96 h 0.67 >More info 0.47 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
34 WT 2-4h Xanthomonas 0.55 >More info 0.58 >More info WT T0 Original data GEO bulk
35 cpr5npr1 0.56 >More info 0.57 >More info WT(COL) Original data GEO bulk
36 Col-0 9 hpi A. brassicicola 0.63 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
37 Col0-PsmES4326-24hpi 0.52 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
38 Col whole leaf amplified 5 dpi 0.54 >More info 0.59 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
39 AsAKiin11 T1 0.53 >More info 0.59 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
40 ice1 6H Cold 0.68 >More info 0.44 >More info WT 6H Cold Original data GEO bulk
41 Col-0 INA 6d 0.55 >More info 0.56 >More info Col-0 MOCK 6d Original data GEO bulk
42 Elevated CO2 AMPLE N NIGHT 0.45 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
43 Elevated CO2 AMPLE N DAY 0.46 >More info 0.65 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
44 oas-a1.1 Cd 18h 0.52 >More info 0.59 >More info Cd 18h root Root Original data GEO bulk
45 S58-2 0.59 >More info 0.52 >More info wt Original data GEO bulk
46 CAX1/CAX3 mutant 0.50 >More info 0.61 >More info Col whole plant Original data GEO bulk
47 Col whole leaf 5dpi 0.54 >More info 0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
48 aba3-1 0.55 >More info 0.55 >More info wt Original data GEO bulk
49 E.coli 0157 H7 7h 0.56 >More info 0.54 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
50 pepr1-1 Pepr2-3 +Pep2 10h -0.58 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
51 WT 3h -P 0.58 >More info 0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
52 WT-SA 0.55 >More info 0.54 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
53 vte2 leaves 48h LT 0.57 >More info 0.52 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
54 DFPM 0.58 >More info 0.50 >More info control Original data GEO bulk
55 hrpA 7h 0.62 >More info 0.45 >More info Mock 7h hrpA Original data GEO bulk
56 Seedling KUA1-IOX est 0.58 >More info 0.49 >More info Seedling KUA1-IOX mock Original data
57 CMV-WT 0.57 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
58 aerial organ callus inducing medium 24h 0.57 >More info 0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
59 csn5 (csn5a-2 csn5b) light 0.60 >More info 0.47 >More info WT light Original data GEO bulk
60 dde2-2 9 hpi A. brassicicola 0.50 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.62 >More info 0.44 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
62 35S:RPS4 eds1-2 8h -0.54 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
63 UV Stress 24 h (shoot) 0.49 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
64 bio4-1 mutant leaves 0.42 >More info 0.64 >More info WT leaves leaves Original data GEO bulk
65 sta1 0.65 >More info 0.40 >More info WT Original data GEO bulk
66 Col-0 INA 48h 0.55 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
67 cpr5npr1svi1 0.50 >More info 0.55 >More info WT(COL) Original data GEO bulk
68 efr-1 +elf18 10h -0.50 >More info -0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
69 lht1 PstDC3000 48h 0.54 >More info 0.51 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
70 aerial organ callus inducing medium 48 h 0.61 >More info 0.44 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
71 mkk1/mkk2 24h BTH rep 0.60 >More info 0.45 >More info Col-0 24h BTH rep Original data GEO bulk
72 edr1 18 h powdery mildew 0.51 >More info 0.54 >More info Col-0 18 h powdery mildew Original data GEO bulk
73 aerial organ callus inducing medium 12 h 0.59 >More info 0.45 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
74 Mutant siz1-3 (Drought) 0.51 >More info 0.53 >More info Col-0 (Drought) Original data GEO bulk
75 35S:RPS4 eds1-2 24h -0.57 >More info -0.47 >More info 35S:RPS4 24h leaves Original data
76 LTN008-2 aza-dc 0.58 >More info 0.46 >More info LTN012-2 Mock Original data
77 Cor hrpS 10h 0.55 >More info 0.49 >More info Mock 10h Cor hrpS Original data GEO bulk
78 col-5 hrpA 12h 0.55 >More info 0.49 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
79 siz1-3 drought 0.51 >More info 0.53 >More info Col-0 drought Original data GEO bulk
80 edr1 36 h powdery mildew 0.59 >More info 0.45 >More info Col-0 36 h powdery mildew Original data GEO bulk
81 Differentiation 24h 0.56 >More info 0.48 >More info Differentiation 0h leaves Original data
82 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
83 HopZ1a treated 0.60 >More info 0.44 >More info col Original data GEO bulk
84 Atwrky63 -0.63 >More info -0.40 >More info Col0 none leaf Original data GEO bulk
85 Callus 0.62 >More info 0.41 >More info Control for tissue data callus Original data GEO bulk
86 cpr5scv1 0.55 >More info 0.48 >More info WT(COL) Original data GEO bulk
87 GST NPP1 4 h (leaf) 0.59 >More info 0.44 >More info Mock 4 h (leaf) Original data Elicitor treatments
88 WT 1wk -P 0.62 >More info 0.41 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
89 IMI 4mM 0.60 >More info 0.43 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
90 35S::HRE2 Aerobic -0.45 >More info -0.58 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
91 sid2 -0.44 >More info -0.59 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
92 npr1-1 SA -0.62 >More info -0.40 >More info Col-0 SA complete seedling Original data
93 AvrRpt2 Col-0 6hpi 0.59 >More info 0.43 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
94 ice1 24H Cold 0.60 >More info 0.42 >More info WT 24H Cold Original data GEO bulk
95 pnp1-1 3h -P 0.62 >More info 0.40 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
96 Cor 10h 0.55 >More info 0.47 >More info Mock 10h Cor Original data GEO bulk
97 root - 04% oxygen - 2h 0.21 >More info 0.81 >More info root - 21% oxygen - 2h Original data GEO bulk
98 ice1 control 0.68 >More info 0.33 >More info WT control Original data GEO bulk
99 Wounding Stress3 h (root) -0.60 >More info -0.41 >More info Stress mock 3 h (root) Original data Stress treatments
100 RPL18 TuMV inoculated polysomal RNA 0.52 >More info 0.49 >More info mock inoculated polysomal RNA PO Original data GEO bulk
101 RPL18 TuMV inoculated total RNA 0.51 >More info 0.50 >More info mock inoculated total RNA PO Original data GEO bulk
102 upf3 0.61 >More info 0.40 >More info WT whole plant Original data GEO bulk
103 Mutant siz1-3 0.46 >More info 0.55 >More info Col-0 Original data GEO bulk
104 bio4-1 mutant watered00µM biotin leaves -0.45 >More info -0.56 >More info bio4-1 mutant leaves leaves Original data GEO bulk
105 WT powdery mildew 0.47 >More info 0.54 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
106 siz1-3 control 0.46 >More info 0.55 >More info Col-0 control Original data GEO bulk
107 sni1 0.39 >More info 0.62 >More info WT Original data GEO bulk
108 Col leaves 48h LT 0.48 >More info 0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
109 ceh1 mutant 0.49 >More info 0.52 >More info Parent line Original data
110 CLO 4mM 0.51 >More info 0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
111 coi1-16 ein2 sid2 ctrl -0.62 >More info -0.38 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
112 R. solani AG8 0.59 >More info 0.41 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
113 eds16 whole leaf 7d UI -0.41 >More info -0.59 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
114 Laer pretreat GA Flg22 1h 0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
115 lht1 untreated 0.49 >More info 0.51 >More info WT untreated untreated leaf Original data GEO bulk
116 camta1/2/3 warm 0.46 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
117 wrky33 Bc inoculation 14h 0.63 >More info 0.36 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
118 WT Bc inoculation 14h 0.61 >More info 0.38 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
119 pad4-PsmES4326-24hpi -0.58 >More info -0.41 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
120 pmr5 pmr6 0.59 >More info 0.40 >More info Col-0 Original data GEO bulk
121 mil4 BTH 0.55 >More info 0.44 >More info Col BTH rosettes Original data GEO bulk
122 camta1/2/3 24h cold 0.50 >More info 0.49 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
123 Sulfometuron EC50 0.60 >More info 0.39 >More info Carrier Original data GEO bulk
124 eds16 whole leaf 3dpi -0.30 >More info -0.69 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
125 siliques AtHb1 control 0.47 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
126 vte2-1 3d vernalization 0.49 >More info 0.50 >More info WT 3d vernalization Original data GEO bulk
127 Shoot -Cs 0.39 >More info 0.60 >More info Control-shoot Original data GEO bulk
128 del1-1 mutant 5d uninfected 0.44 >More info 0.55 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
129 ein2-1 9 hpi A. brassicicola 0.50 >More info 0.48 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
130 hrcC 0.54 >More info 0.44 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
131 root - 08% oxygen - 2h 0.20 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
132 Col-0-avrB-6h 0.48 >More info 0.50 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
133 cngc1-3 0.55 >More info 0.42 >More info Col-0 root Original data GEO bulk
134 Laer treat paclobutrazol (PAC) 0.55 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
135 root - 01% oxygen - 48h 0.43 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
136 eds16 whole leaf 5dpi -0.40 >More info -0.57 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
137 Col ozone 2d 0.42 >More info 0.55 >More info Col clean-air 2d ozone Original data GEO bulk
138 brm-101 0.40 >More info 0.57 >More info Ler Original data GEO bulk
139 SLWF infested 0.46 >More info 0.51 >More info SLWF uninfested rosette tissue Original data GEO bulk
140 Elevated CO2 leaf primordia 0.40 >More info 0.56 >More info Ambient CO2 leaf primordia leaf primordia Original data
141 Te ozone 0.60 >More info 0.36 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
142 Primisulfuron EC50 0.56 >More info 0.39 >More info Carrier (primisulfuron) Original data GEO bulk
143 Col whole leaf 5 dpi 0.40 >More info 0.55 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
144 camta1/3 warm 0.40 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
145 CT101 ozone 0.61 >More info 0.34 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
146 smg5-2 0.54 >More info 0.41 >More info WT whole plant Original data GEO bulk
147 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.62 >More info 0.33 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
148 WT-NOCO2 INFECTED 0.50 >More info 0.45 >More info WT-MOCK Original data GEO bulk
149 nia1nia2 0.52 >More info 0.43 >More info Col-0 whole seedlings Original data GEO bulk
150 ubc13A-es -0.61 >More info -0.34 >More info Col-es root Original data GEO bulk
151 Light 3day wt -0.43 >More info -0.52 >More info 0h wt Original data
152 Hypoxic prt6 0.56 >More info 0.38 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
153 E.orontii Infection 3 day 0.38 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
154 hypoxic 0.57 >More info 0.37 >More info WT aerobic hypoxia Original data GEO bulk
155 Col leaves 120h LT 0.51 >More info 0.43 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
156 Triazolopyrimidine EC50 0.59 >More info 0.35 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
157 nia1nia2noa1-2 0.53 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
158 Light 0.37 >More info 0.57 >More info Control Original data GEO bulk
159 Glyphosate EC50 0.43 >More info 0.51 >More info Carrier (Glyphosate) Original data GEO bulk
160 PBZ 0.67 >More info 0.26 >More info none PBZ Rosette Original data GEO bulk
161 DC3000 2 h (leaf) 0.53 >More info 0.40 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
162 csn3-1 light 0.57 >More info 0.36 >More info WT light Original data GEO bulk
163 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.59 >More info 0.34 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
164 cs26 long day 0.50 >More info 0.43 >More info Leaves-WT-LD leaf Original data GEO bulk
165 pepr1-1 Pepr2-3 untreated 0.43 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
166 Col-0 SA 0.55 >More info 0.37 >More info Col-0 water complete seedling Original data
167 pnp1-1 1wk -P 0.67 >More info 0.25 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
168 S14-150 0.57 >More info 0.35 >More info wt Original data GEO bulk
169 C24 ozone 0.62 >More info 0.30 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
170 ARR22-ox (t-zeatin 3 h) 0.62 >More info 0.30 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
171 WT flg22 2h 0.42 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
172 ice1 3H Cold 0.63 >More info 0.28 >More info WT 3H Cold Original data GEO bulk
173 Time-0 chr11-1chr17-1 -0.53 >More info -0.38 >More info Time-0 Col-0 leaf explants Original data
174 abi4 vtc2 (I) 0.51 >More info 0.40 >More info Col (I) rosette Original data GEO bulk
175 Col-0 wt Hypoxic 0.36 >More info 0.55 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
176 downy mildew cotyledons late stage 0.37 >More info 0.54 >More info mock inoculated Cotyledons Original data GEO bulk
177 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
178 seed germinating in countinuous light 24h SL 0.24 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
179 camta2/3 warm 0.36 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
180 root - 04% oxygen - 48h 0.20 >More info 0.71 >More info root - 21% oxygen - 48h Original data GEO bulk
181 gir flower 33d 0.41 >More info 0.50 >More info Col-7 flower 33d flower Original data GEO bulk
182 root - 08% oxygen - 48h 0.35 >More info 0.55 >More info root - 21% oxygen - 48h Original data GEO bulk
183 AvrRpm1 2 h (leaf) 0.55 >More info 0.34 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
184 Hypoxic e1 ate 0.55 >More info 0.34 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
185 Leafminer damaged seedlings 0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
186 IRP1-OE-Fe--shoot 0.50 >More info 0.39 >More info COL-0-Fe--shoot shoot Original data
187 IRP1-OE-Ctrl--shoot 0.62 >More info 0.27 >More info COL-0-Ctrl--shoot shoot Original data
188 npr1-3 DCA 48h 0.39 >More info 0.50 >More info npr1-3 MOCK 48h Original data GEO bulk
189 mbd6 mutant thaliana 10-day-old seedling 0.57 >More info 0.32 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
190 Col-0 ozone 0.59 >More info 0.30 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
191 seedlings +5AC 0.55 >More info 0.33 >More info control seedlings 10-day old whole seedling Original data GEO bulk
192 UV 0.54 >More info 0.34 >More info WT aerial region Original data GEO bulk
193 Col upon hypoxia 6 hrs 0.51 >More info 0.37 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
194 Pto inoculated 0.53 >More info 0.35 >More info col Original data GEO bulk
195 tt4 0.51 >More info 0.37 >More info Col-0 aerial part Original data
196 Col-0 C2H4 24h 0.50 >More info 0.38 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
197 upf1 0.59 >More info 0.29 >More info WT whole plant Original data GEO bulk
198 mbd4 mutant thaliana 10-day-old seedling 0.56 >More info 0.31 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
199 SPT4-R3 seedlings0 DAS 0.55 >More info 0.32 >More info Col-0 seedlings0 DAS seedlings Original data
200 35S-MIF1 light grown 0.63 >More info 0.24 >More info Light-grown WT control Original data GEO bulk
201 gun1gun5 far-red pretreated -0.59 >More info -0.28 >More info WT far-red pretreated Original data GEO bulk
202 35S::ERF104 Flg22 4h 0.50 >More info 0.37 >More info 35S::ERF104 H2O 4h Original data GEO bulk
203 Mutant ufo-1(flower) 0.35 >More info 0.52 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
204 35S::PI ap3-3 35S::AP-GR +DEX 0.37 >More info 0.50 >More info 0hr DEX Original data GEO bulk
205 camta3-2 0.30 >More info 0.57 >More info WT Original data GEO bulk
206 miR393 0h -0.29 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
207 Leaf GLU1-KO 0.54 >More info 0.32 >More info Leaf Col(0) rosette leaves Original data GEO bulk
208 HopZ1a treated ulp1c ulp1d 0.52 >More info 0.34 >More info col Original data GEO bulk
209 ASL9-ox -0.52 >More info -0.34 >More info WT aerial parts of seedlings Original data GEO bulk
210 bak1-3 untreated 0.62 >More info 0.24 >More info WT untreated untreated Original data GEO bulk
211 root Dosed gold 0.50 >More info 0.36 >More info root No gold .125 mM gold 24 h roots Original data
212 0.125 mM gold 24 h 0.50 >More info 0.36 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
213 Norflurazon 0.36 >More info 0.50 >More info Col-0 Original data GEO bulk
214 Norflurazon 0.36 >More info 0.50 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
215 TiO2 germinant -0.54 >More info -0.31 >More info Millipore Water germinant TiO2 seedling Original data
216 gai Control 0.53 >More info 0.32 >More info Laer Control leaf discs Original data GEO bulk
217 shoots bhlh100/101 0uM Fe 0.59 >More info 0.26 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
218 NAA -AA 0.59 >More info 0.26 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
219 long 17-degree- 0.50 >More info 0.35 >More info control long Original data GEO bulk
220 ACC 3 h 0.56 >More info 0.28 >More info Mock 3 h Original data Basic hormone treatment of seedlings
221 MPK6 ox Root Hypoxia 0.32 >More info 0.52 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
222 WT Shoot Hypoxia 0.16 >More info 0.67 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
223 OE WRKY40.4 high light 0.33 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
224 35S:PCO1 hypoxia -0.20 >More info -0.63 >More info WT hypoxia whole rosette Original data
225 CeO2 germinant -0.32 >More info -0.51 >More info Millipore Water germinant CeO2 seedling Original data
226 FAMA induced 4h -0.30 >More info -0.52 >More info control 4h Whole seedling Original data GEO bulk
227 cop1 Seedling BL 0.57 >More info 0.25 >More info WT Seedling BL Original data GEO bulk
228 WT NAA 1h 0.21 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
229 Mutant cry1 (High Light) -0.53 >More info -0.28 >More info Col-0 (High Light) Original data GEO bulk
230 cry1 high light -0.53 >More info -0.28 >More info Col-O high light Original data GEO bulk
231 root - 01% oxygen - 2h 0.13 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
232 Botrytis cinerea 48h 0.57 >More info 0.24 >More info control 48h Original data GEO bulk
233 aox1a(line) MLD stressed 0.53 >More info 0.27 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
234 Laer Flg22 2h 0.50 >More info 0.30 >More info Laer Control leaf discs Original data GEO bulk
235 sid2-2 9 hpi A. brassicicola 0.54 >More info 0.26 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
236 coi1-16 ein2 sid2 ozone 0.50 >More info 0.29 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
237 L2.5 mutant -0.58 >More info -0.20 >More info Wt Original data GEO bulk
238 clf-28 swn-7 0.53 >More info 0.25 >More info Col whole plant Original data GEO bulk
239 Col laser microdissected 5 dpi 0.25 >More info 0.53 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
240 amiRAP aerobic -0.16 >More info -0.62 >More info WT aerobic aerobic Original data GEO bulk
241 JMJ24 knockout 0.52 >More info 0.25 >More info WT Original data GEO bulk
242 root hypoxia total 0.27 >More info 0.50 >More info root control total Original data GEO bulk
243 CHS-silenced type -0.57 >More info -0.19 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
244 long 12-degree- 0.50 >More info 0.25 >More info control long Original data GEO bulk
245 shoots WT 0uM Fe 0.50 >More info 0.25 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
246 det2 light-dark -0.51 >More info -0.24 >More info det2 light light-dark Original data GEO bulk
247 35S-MIF1 dark grown 0.54 >More info 0.21 >More info Dark-grown WT control Original data GEO bulk
248 ARR21C-ox 0.51 >More info 0.24 >More info Col-0 Original data ARR21C overexpression
249 root - 01% oxygen - 30min 0.19 >More info 0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
250 M6PR transgenic leaf 100mM NaCl -0.50 >More info -0.24 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
251 eds16 whole leaf 0h UI -0.19 >More info -0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
252 Genotoxic Stress 3 h (root) -0.53 >More info -0.20 >More info Stress mock 3 h (root) Original data Stress treatments
253 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.67 >More info -0.05 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
254 shoot hypoxia total 0.17 >More info 0.55 >More info shoot control total Original data GEO bulk
255 SA Treated 0.64 >More info 0.08 >More info Water Original data GEO bulk
256 root - 04% oxygen - 30min 0.10 >More info 0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
257 WT Root Hypoxia 0.08 >More info 0.64 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
258 INA 0.19 >More info 0.53 >More info CK INA seedling Original data
259 TNT-seedlings 0.61 >More info 0.10 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
260 root - 08% oxygen - 30min -0.00 >More info 0.71 >More info root - 21% oxygen - 30min Original data GEO bulk
261 ms35 silique stage 7 0.19 >More info 0.52 >More info Ler 6.7 anther and filament Original data GEO bulk
262 WT (Col-0) inflorescence well-watered day 3 -0.20 >More info -0.51 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
263 cop1 Seedling BL+ABA 0.51 >More info 0.19 >More info WT Seedling BL+ABA Original data GEO bulk
264 roottip hypoxia total 0.18 >More info 0.52 >More info roottip control total Original data GEO bulk
265 red illumination +lincomycin 0.16 >More info 0.52 >More info red illumination -lincomycin Original data GEO bulk
266 camta1 root drought 0.52 >More info 0.15 >More info Col-0 root drought root Original data GEO bulk
267 Mutant axr3-1 0.51 >More info 0.16 >More info Col Original data GEO bulk
268 eds16 whole leaf 1dpi -0.11 >More info -0.55 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
269 35S:ATR1 like miR -0.11 >More info -0.54 >More info WT for miR Original data GEO bulk
270 pvip1 pvip2 seedling 0.66 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
271 cngc19 0.53 >More info 0.11 >More info Col-0 root Original data GEO bulk
272 tcp13 -0.10 >More info 0.74 >More info WT inflorescences Original data GEO bulk
273 Shoot apex inflorescence (after bolting) -0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
274 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
275 bri1-116 -0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
276 tcp13/+ tcp14/+ -0.10 >More info 0.71 >More info WT inflorescences Original data GEO bulk
277 Mutant cry1 -0.54 >More info -0.06 >More info Col-0 Original data GEO bulk
278 cry1 low light -0.54 >More info -0.06 >More info Col-O low light Original data GEO bulk
279 24h +Pi -0.52 >More info -0.08 >More info 24h -Pi root Original data GEO bulk
280 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
281 scl3 0.50 >More info 0.07 >More info Col-0 whole root Original data GEO bulk
282 Laer GA 2h -0.02 >More info -0.55 >More info Laer Control leaf discs Original data GEO bulk
283 Full C2 T2 -0.06 >More info -0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
284 shoot control pSultr2:2 -0.53 >More info -0.03 >More info shoot control total Original data GEO bulk
285 rsa3-1 Na 24h 0.01 >More info 0.55 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
286 vte2 leaves 120h LT 0.51 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
287 HairpinZ 4 h (leaf) 0.58 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
288 opr3 OPDA 0.5 h -0.07 >More info 0.60 >More info opr3 0 h Original data GEO bulk
289 Stem 2ndinternode -0.51 >More info 0.00 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
290 JMJ24-IBM1 double knockout -0.50 >More info -0.01 >More info WT Original data GEO bulk
291 Col-0 mbs1-1 HL 0h 0.50 >More info 0.01 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
292 GO5; 0h switch to ambient CO2 concentrations; -0.61 >More info 0.14 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
293 Whole root - low pH 30min -0.08 >More info 0.53 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
294 Col PSTDC3000 24h 0.58 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
295 SA 3h -0.21 >More info 0.59 >More info EtOH 3h 3hr Original data GEO bulk
296 2hr continuous KNO3 ECR cell -0.12 >More info 0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
297 P. infestans 6 h (leaf) 0.52 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
298 2hr transitory KNO3 ECR cell -0.19 >More info 0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
299 SHR-GR Time 3H Dex 0.18 >More info -0.51 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk