4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on pnp1-1 1wk -P
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List of experiments correlated with "pnp1-1 1wk -P"  Help Download transcriptome of top 30
Score Experiment Correlation from
pnp1-1 1wk -P		 Correlation to
pnp1-1 1wk -P		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pnp1-1 1wk -P 1.00 >More info 1.00 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
2 pnp1-1 1wk +P 0.83 >More info 0.87 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
3 pnp1-1 3h +P 0.75 >More info 0.80 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
4 pnp1-1 3h -P 0.67 >More info 0.75 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
5 UV Stress 24 h (shoot) 0.57 >More info 0.75 >More info Stress mock 24 h (shoot) Original data Stress treatments
6 Col whole leaf 7dpi 0.55 >More info 0.76 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
7 aba3-1 0.53 >More info 0.77 >More info wt Original data GEO bulk
8 +1.6 mM Tween 20 1 h. 0.45 >More info 0.85 >More info +distilled water 1 h. Original data GEO bulk
9 bio4-1 mutant leaves 0.55 >More info 0.74 >More info WT leaves leaves Original data GEO bulk
10 WT 3h -P 0.46 >More info 0.82 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
11 bio4-1 mutant watered00µM biotin leaves -0.47 >More info -0.81 >More info bio4-1 mutant leaves leaves Original data GEO bulk
12 S15-118 0.49 >More info 0.79 >More info wt Original data GEO bulk
13 mkk1/mkk2 24h BTH rep 0.58 >More info 0.69 >More info Col-0 24h BTH rep Original data GEO bulk
14 sta1 0.59 >More info 0.67 >More info WT Original data GEO bulk
15 cs26 long day 0.58 >More info 0.68 >More info Leaves-WT-LD leaf Original data GEO bulk
16 ceh1 mutant 0.53 >More info 0.72 >More info Parent line Original data
17 hrcC 0.53 >More info 0.72 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
18 sid2-1 cold -0.56 >More info -0.68 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
19 AvrRpt2 Col-0 6hpi 0.57 >More info 0.67 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
20 WT Col-0 Bgh inoculated 0.55 >More info 0.69 >More info WT Col-0 Un-inoculated Original data GEO bulk
21 sid2 -0.48 >More info -0.75 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
22 camta1/2/3 24h cold 0.58 >More info 0.64 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
23 noa1-2 0.65 >More info 0.57 >More info Col-0 whole seedlings Original data GEO bulk
24 mkk1/mkk2 control rep 0.50 >More info 0.72 >More info Col-0 Time 0 rep Original data GEO bulk
25 ataf1-1 mutant Col-0 Bgh inoculated 0.50 >More info 0.72 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
26 Dex-rga(delta17) 4h GA4+DEX -0.62 >More info -0.59 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
27 E.orontii Infection 3 day 0.49 >More info 0.72 >More info Uninfection 3 day Original data Elicitor treatments
28 35S::PI ap3-3 35S::AP-GR +DEX 0.53 >More info 0.67 >More info 0hr DEX Original data GEO bulk
29 del1-1 mutant 5d uninfected 0.44 >More info 0.76 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
30 35S:RPS4 eds1-2 8h -0.51 >More info -0.68 >More info 35S:RPS4 8h leaves Original data
31 sni1 0.46 >More info 0.73 >More info WT Original data GEO bulk
32 Te ozone 0.62 >More info 0.55 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
33 WT leaves - Fe 0.64 >More info 0.53 >More info WT leaves + Fe Leaves Original data GEO bulk
34 smg7b-1 0.46 >More info 0.71 >More info WT whole plant Original data GEO bulk
35 cdpk6-yfp 0.49 >More info 0.68 >More info Kan seedlings Original data GEO bulk
36 col-5 hrpA 12h 0.47 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
37 CT101 ozone 0.65 >More info 0.51 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
38 WT 2-4h Xanthomonas 0.50 >More info 0.66 >More info WT T0 Original data GEO bulk
39 anac017-2 AntimycinA 3h -0.56 >More info -0.60 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
40 Mutant siz1-3 0.44 >More info 0.72 >More info Col-0 Original data GEO bulk
41 msh1 recA3 untreated 0.42 >More info 0.74 >More info WT untreated above-ground parts Original data GEO bulk
42 siz1-3 control 0.44 >More info 0.72 >More info Col-0 control Original data GEO bulk
43 Col-0 9 hpi A. brassicicola 0.44 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.61 >More info 0.54 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
45 Norflurazon 0.45 >More info 0.70 >More info Col-0 Original data GEO bulk
46 Norflurazon 0.45 >More info 0.70 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
47 Col leaves 48h LT 0.50 >More info 0.64 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
48 coi1-16 ein2 sid2 ctrl -0.58 >More info -0.56 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
49 Cor 10h 0.50 >More info 0.64 >More info Mock 10h Cor Original data GEO bulk
50 E.coli TUV86 2 fliC 7h 0.47 >More info 0.67 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
51 S58-2 0.41 >More info 0.73 >More info wt Original data GEO bulk
52 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.59 >More info 0.54 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
53 Laer Flg22 2h 0.58 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
54 Cor hrpS 10h 0.47 >More info 0.66 >More info Mock 10h Cor hrpS Original data GEO bulk
55 cpr5scv1 0.36 >More info 0.77 >More info WT(COL) Original data GEO bulk
56 cpr5npr1svi1 0.35 >More info 0.78 >More info WT(COL) Original data GEO bulk
57 shoots bhlh100/101 0uM Fe 0.46 >More info 0.66 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
58 mil4 BTH 0.47 >More info 0.65 >More info Col BTH rosettes Original data GEO bulk
59 GST NPP1 4 h (leaf) 0.46 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
60 Dex-rga(delta17) 2h GA4+DEX -0.60 >More info -0.51 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
61 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.61 >More info WT light Original data GEO bulk
62 IMI 4mM 0.50 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 msh1 recA3 heat shock 0.36 >More info 0.75 >More info WT heat shock above-ground parts Original data GEO bulk
64 csn3-1 light 0.57 >More info 0.53 >More info WT light Original data GEO bulk
65 S14-150 0.50 >More info 0.60 >More info wt Original data GEO bulk
66 msh1 albino 0.44 >More info 0.66 >More info WT aerial part Original data GEO bulk
67 camta1/2/3 warm 0.44 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
68 irradiated leaf (WT 1d) 0.48 >More info 0.62 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
69 nar1-4/- 0.56 >More info 0.53 >More info WT whole seedling Original data GEO bulk
70 CAX1/CAX3 mutant 0.56 >More info 0.53 >More info Col whole plant Original data GEO bulk
71 Col-0 ozone 0.59 >More info 0.50 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
72 hrpA 7h 0.36 >More info 0.73 >More info Mock 7h hrpA Original data GEO bulk
73 Elevated CO2 AMPLE N DAY 0.39 >More info 0.70 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
74 CeO2 germinant -0.49 >More info -0.60 >More info Millipore Water germinant CeO2 seedling Original data
75 pepr1-1 Pepr2-3 +Pep2 2h -0.40 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
76 Shoot -Cs 0.32 >More info 0.76 >More info Control-shoot Original data GEO bulk
77 ein2-1 9 hpi A. brassicicola 0.37 >More info 0.71 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
78 Col-Luc WT 3h antimycin A 0.52 >More info 0.55 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
79 mkk2 24h BTH rep 0.44 >More info 0.63 >More info Col-0 24h BTH rep Original data GEO bulk
80 lht1 untreated 0.40 >More info 0.67 >More info WT untreated untreated leaf Original data GEO bulk
81 Laer treat paclobutrazol (PAC) 0.54 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
82 DC3000 2 h (leaf) 0.44 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
83 Mutant siz1-3 (Drought) 0.41 >More info 0.65 >More info Col-0 (Drought) Original data GEO bulk
84 Col whole leaf 5dpi 0.36 >More info 0.70 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
85 camta2/3 warm 0.43 >More info 0.63 >More info WT warm entire aerial part Original data GEO bulk
86 siz1-3 drought 0.41 >More info 0.65 >More info Col-0 drought Original data GEO bulk
87 Laer Flg22+GA 2h 0.52 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
88 C24 ozone 0.57 >More info 0.47 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
89 Mutant coi1(leaf) -0.51 >More info -0.53 >More info Col-0 (leaf) Original data GEO bulk
90 dde2-2 9 hpi A. brassicicola 0.41 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
91 Laer Flg22 1h 0.51 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
92 Atwrky63 -0.54 >More info -0.49 >More info Col0 none leaf Original data GEO bulk
93 msh1 variegation Col-0 0.63 >More info 0.40 >More info WT Col-0 above ground part of plant Original data GEO bulk
94 coi1-16 ein2 sid2 ozone 0.51 >More info 0.52 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
95 Lipopolysaccaride4 h (leaf) 0.34 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
96 Infected pft1 leaf 0.37 >More info 0.66 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
97 ahg2-1sid2-2 0.42 >More info 0.61 >More info WT (Col) control Original data GEO bulk
98 WT flg22 2h 0.44 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
99 Fenclorim 4hr 0.38 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
100 col-5 hrpA 4h 0.41 >More info 0.62 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
101 shoots WT 0uM Fe 0.55 >More info 0.47 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
102 Col-0 norflurazon 0.48 >More info 0.54 >More info Col-0 control Original data GEO bulk
103 ahg2-1 0.49 >More info 0.53 >More info WT (Col) control Original data GEO bulk
104 apum23 0.41 >More info 0.61 >More info WT (Col-3) aerial parts Original data GEO bulk
105 Primisulfuron EC50 0.44 >More info 0.58 >More info Carrier (primisulfuron) Original data GEO bulk
106 toc1-1-57hr 0.48 >More info 0.53 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
107 Nicotinamide-73hr 0.48 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
108 RPL18 TuMV inoculated total RNA 0.39 >More info 0.62 >More info mock inoculated total RNA PO Original data GEO bulk
109 RPL18 TuMV inoculated polysomal RNA 0.42 >More info 0.59 >More info mock inoculated polysomal RNA PO Original data GEO bulk
110 35S::ERF104 Flg22 4h 0.41 >More info 0.59 >More info 35S::ERF104 H2O 4h Original data GEO bulk
111 eds16 whole leaf 3dpi -0.33 >More info -0.67 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
112 Laer Flg22+GA 1h 0.47 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
113 Col-0-avrB-6h 0.35 >More info 0.65 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
114 UV 0.48 >More info 0.52 >More info WT aerial region Original data GEO bulk
115 vtc2 (I) 0.41 >More info 0.59 >More info Col (I) rosette Original data GEO bulk
116 cpr5 0.34 >More info 0.66 >More info WT seedling Original data GEO bulk
117 Col-0 SA 0.48 >More info 0.52 >More info Col-0 Original data GEO bulk
118 35S:RPS4 eds1-2 24h -0.36 >More info -0.64 >More info 35S:RPS4 24h leaves Original data
119 seedlings protease IV 0.35 >More info 0.65 >More info seedlings nontreated control whole seedling Original data
120 LTN008-2 aza-dc 0.43 >More info 0.57 >More info LTN012-2 Mock Original data
121 wrky33 Bc inoculation 14h 0.50 >More info 0.49 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
122 lht1 PstDC3000 48h 0.34 >More info 0.65 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
123 toc1-1-61hr 0.49 >More info 0.50 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
124 toc1-1-49hr 0.43 >More info 0.56 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
125 WT-SA 0.30 >More info 0.69 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
126 Botrytis cinerea 48h 0.39 >More info 0.60 >More info control 48h Original data GEO bulk
127 Elevated CO2 AMPLE N NIGHT 0.25 >More info 0.74 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
128 Phaseolicola 2 h (leaf) 0.33 >More info 0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
129 WT flg22 1h 0.47 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
130 Tsu-1 -Fe 24h 0.41 >More info 0.57 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
131 ice1 control 0.34 >More info 0.64 >More info WT control Original data GEO bulk
132 Tsu -Fe 24h Roots 0.41 >More info 0.57 >More info Tsu +Fe 24h Roots Original data GEO bulk
133 Root -Cs 0.41 >More info 0.57 >More info Control-root Original data GEO bulk
134 oligomycin 4 h 0.42 >More info 0.55 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
135 col-5 DC3000 12h 0.41 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
136 albino Ds13-2198-1 -0.41 >More info -0.56 >More info control Original data GEO bulk
137 Triazolopyrimidine EC50 0.40 >More info 0.57 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
138 Col BTH 0.30 >More info 0.67 >More info Col rosettes Original data GEO bulk
139 Nicotinamide-81hr 0.51 >More info 0.45 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
140 phr1 phl1 Shoot-Pi 0.62 >More info 0.34 >More info WT Shoot-Pi shoots Original data GEO bulk
141 mpk6-ko Flg22 4h 0.25 >More info 0.71 >More info mpk6-ko H2O 4h Original data GEO bulk
142 WT AntimycinA 3h 0.41 >More info 0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
143 WT powdery mildew 0.25 >More info 0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
144 rcf1-1 cold 24h 0.40 >More info 0.55 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
145 WT cold 0.39 >More info 0.56 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
146 Nicotinamide-53hr 0.54 >More info 0.41 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
147 edr1 18 h powdery mildew 0.35 >More info 0.60 >More info Col-0 18 h powdery mildew Original data GEO bulk
148 Aerobic prt6 0.35 >More info 0.60 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
149 irradiated leaf (cmt 1d) 0.33 >More info 0.62 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
150 tt4 0.32 >More info 0.63 >More info Col-0 aerial part Original data
151 ERF96OE 0.36 >More info 0.59 >More info WT leaf Original data
152 B.cinerea 18 h infection 0.27 >More info 0.67 >More info Mock 18 h Original data Botrytis cinerea infection
153 FAMA induced 4h -0.38 >More info -0.56 >More info control 4h Whole seedling Original data GEO bulk
154 abi4 vtc2 (I) 0.39 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
155 Botrytis cinerea 18h 0.27 >More info 0.67 >More info control 18h Original data GEO bulk
156 pGL1::GL1-GR Dex 4 hours -0.50 >More info -0.44 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
157 Nicotinamide-49hr 0.57 >More info 0.37 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
158 Mutant sav3-2 (WL) 0.35 >More info 0.59 >More info Col-0 (WL) Original data GEO bulk
159 WT Bc inoculation 14h 0.42 >More info 0.52 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
160 flu over-tAPX 0.33 >More info 0.61 >More info WT Col Original data GEO bulk
161 Col-0 INA 6d 0.30 >More info 0.64 >More info Col-0 MOCK 6d Original data GEO bulk
162 rcf1-1 cold 12h 0.42 >More info 0.52 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
163 sav3-2 light 0.35 >More info 0.59 >More info Col-0 light seedlings Original data GEO bulk
164 seedlings-week-old RECA1-overexpressing
transgenic		 0.23 >More info 0.71 >More info seedlings-week-old Col-0 seedlings Original data
165 ice1 6H Cold 0.28 >More info 0.65 >More info WT 6H Cold Original data GEO bulk
166 Nicotinamide-61hr 0.62 >More info 0.31 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
167 phyB mutant 22C 10hrs -0.41 >More info -0.52 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
168 P.p 10.5hai 0.34 >More info 0.59 >More info At-Control roots Original data GEO bulk
169 OE WRKY63.3 high light 0.33 >More info 0.60 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
170 hrpA fliC 7h 0.29 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
171 anac017-1 H2O2 3h -0.53 >More info -0.39 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
172 miR393 0h -0.28 >More info -0.64 >More info WT 0h Leaf tissue Original data GEO bulk
173 ASL9-ox -0.39 >More info -0.53 >More info WT aerial parts of seedlings Original data GEO bulk
174 Stem tissue 5 days NAA 0.25 >More info 0.67 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
175 col-5 DC3000-avrRpm 4h 0.38 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
176 col-5 hrpA 2h 0.38 >More info 0.54 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
177 Flagellin 4 h (leaf) 0.32 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
178 CMP 4hr 0.30 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
179 Nicotinamide-65hr 0.55 >More info 0.36 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
180 erf104-ko Flg22 4h 0.26 >More info 0.65 >More info erf104-ko H2O 4h Original data GEO bulk
181 Glyphosate EC50 0.39 >More info 0.52 >More info Carrier (Glyphosate) Original data GEO bulk
182 P.p 2.5hai 0.41 >More info 0.50 >More info At-Control roots Original data GEO bulk
183 DFPM 0.31 >More info 0.60 >More info control Original data GEO bulk
184 smg5-2 0.41 >More info 0.50 >More info WT whole plant Original data GEO bulk
185 DC3000 24h 0.32 >More info 0.59 >More info Mock 24h DC3000 Original data GEO bulk
186 gh3.5-1D 48 hpi 0.32 >More info 0.59 >More info Col-0 uninoculated Original data GEO bulk
187 flu 0.35 >More info 0.55 >More info WT Col Original data GEO bulk
188 WT-NOCO2 INFECTED 0.27 >More info 0.63 >More info WT-MOCK Original data GEO bulk
189 WT 90-105 min Xanthomonas 0.39 >More info 0.51 >More info WT T0 Original data GEO bulk
190 prors1-2 leaves 0.27 >More info 0.63 >More info Col-0 leaves leaves Original data
191 Col-0 Flg22 4h 0.31 >More info 0.59 >More info Col-0 H2O 4h Original data GEO bulk
192 wavy 0.33 >More info 0.56 >More info WT Original data GEO bulk
193 35S::HRE1 Hypoxic -0.61 >More info -0.28 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
194 miR393 flg22 2h 0.35 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
195 toc1-1-81hr 0.37 >More info 0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
196 efr-1 +elf18 10h -0.21 >More info -0.68 >More info WT +elf18 10h elf18 Original data GEO bulk
197 Cor 24h 0.26 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
198 Col-0 48 hpi 0.36 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
199 tumour 0.30 >More info 0.59 >More info non-tumor tumour Original data GEO bulk
200 cpr5npr1 0.19 >More info 0.70 >More info WT(COL) Original data GEO bulk
201 msh1 stunt 0.55 >More info 0.33 >More info WT Col-0 above ground part of plant Original data GEO bulk
202 Nicotinamide-89hr 0.56 >More info 0.32 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
203 Col whole leaf 5 dpi 0.32 >More info 0.56 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
204 col-5 DC3000 4h 0.33 >More info 0.55 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
205 GO5; 8h switch to ambient CO2 concentrations; 0.34 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
206 aba2 1% sucrose 12-day-old 0.24 >More info 0.64 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
207 Col-0 INA 48h 0.23 >More info 0.65 >More info Col-0 MOCK 48h Original data GEO bulk
208 GV3101 6dpi 0.36 >More info 0.52 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
209 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
210 Col0-PsmES4326-24hpi 0.27 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
211 P.p 6hai 0.38 >More info 0.50 >More info At-Control roots Original data GEO bulk
212 Constans-mutant 0.38 >More info 0.50 >More info Col control above-ground whole plant Original data GEO bulk
213 L2.5 mutant -0.36 >More info -0.52 >More info Wt Original data GEO bulk
214 OH1 0.26 >More info 0.62 >More info Col-0 leaves Original data GEO bulk
215 A6 mutant 0.28 >More info 0.60 >More info WT rosette leaves Rosette leaves Original data GEO bulk
216 pmr5 pmr6 0.23 >More info 0.65 >More info Col-0 Original data GEO bulk
217 pmr5 0.24 >More info 0.64 >More info Col-0 Original data GEO bulk
218 cpr5 0.15 >More info 0.72 >More info WT(COL) Original data GEO bulk
219 camta3-1 0.30 >More info 0.57 >More info WT Original data GEO bulk
220 HopZ1a treated 0.29 >More info 0.58 >More info col Original data GEO bulk
221 Nicotinamide-57hr 0.53 >More info 0.33 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
222 miR393 flg22 1h 0.34 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
223 petiole in D 0.33 >More info 0.53 >More info petiole in WL petioles Original data GEO bulk
224 Col ozone 3h 0.34 >More info 0.52 >More info Col clean-air 3h ozone Original data GEO bulk
225 WT chitooctaose 0.30 >More info 0.56 >More info WT water Original data GEO bulk
226 gun1gun5 Norflurazon -0.51 >More info -0.35 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
227 Nicotinamide-69hr 0.50 >More info 0.36 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
228 Col whole leaf amplified 5 dpi 0.25 >More info 0.61 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
229 pad4-PsmES4326-24hpi -0.35 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
230 Col-0 +lincomycin 0.28 >More info 0.58 >More info Col-0 -lincomycin Original data GEO bulk
231 rosette Light Wounded 0.30 >More info 0.55 >More info rosette Light Control Original data GEO bulk
232 eds16 whole leaf 7d UI -0.10 >More info -0.75 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
233 Cambium 5 days NAA 0.26 >More info 0.59 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
234 MIL4 ox BTH 0.24 >More info 0.61 >More info Col BTH Original data GEO bulk
235 Whole root - low pH 48H 0.33 >More info 0.51 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
236 35S:RPS4 eds1-2 2h -0.33 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
237 Differentiation 12h 0.30 >More info 0.54 >More info Differentiation 0h leaves Original data
238 Light 3day wt -0.27 >More info -0.57 >More info 0h wt Original data
239 CMP 24hr 0.25 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
240 ice1 24H Cold 0.27 >More info 0.57 >More info WT 24H Cold Original data GEO bulk
241 CMV-WT 0.21 >More info 0.63 >More info Mock-At Aerial tissues Original data GEO bulk
242 Sulfometuron EC50 0.28 >More info 0.55 >More info Carrier Original data GEO bulk
243 AgNO3 3 h 0.21 >More info 0.62 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
244 edr1 36 h powdery mildew 0.25 >More info 0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
245 toc1-1-65hr 0.56 >More info 0.26 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
246 siliques AtHb1 control 0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
247 Mature callus 0.28 >More info 0.54 >More info Young callus hypocotyls Original data GEO bulk
248 OE WRKY40.4 high light 0.28 >More info 0.54 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
249 pmr4-1 control 0.21 >More info 0.61 >More info WT control uninoculated Original data GEO bulk
250 CLO 4mM 0.31 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
251 MPK6 ox Shoot Hypoxia 0.17 >More info 0.64 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
252 camta1/3 warm 0.18 >More info 0.63 >More info WT warm entire aerial part Original data GEO bulk
253 35S::HRE2 Hypoxic -0.57 >More info -0.24 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
254 downy mildew cotyledons late stage 0.22 >More info 0.59 >More info mock inoculated Cotyledons Original data GEO bulk
255 Mutant sav3-2 (SH) 0.19 >More info 0.61 >More info Col-0 (SH) Original data GEO bulk
256 sav3-2 shade 0.19 >More info 0.61 >More info Col-0 shade seedlings Original data GEO bulk
257 aox1a:rpoTmp MLD stressed 0.57 >More info 0.23 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
258 xrn4-5 flower -0.54 >More info -0.25 >More info Col-0 flower inflorescence Original data GEO bulk
259 root endodermis and quiescent center pH4.6 0.24 >More info 0.55 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
260 ice1 3H Cold 0.28 >More info 0.51 >More info WT 3H Cold Original data GEO bulk
261 E.coli 0157 H7 7h 0.14 >More info 0.65 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
262 sicy-192 cotyledons 0.17 >More info 0.62 >More info WT cotyledons cotyledons Original data
263 SLWF infested 0.22 >More info 0.57 >More info SLWF uninfested rosette tissue Original data GEO bulk
264 oas-a1.1 Cd 18h 0.12 >More info 0.66 >More info Cd 18h root Root Original data GEO bulk
265 Col-0 V. longisporum-inoculated 48 hpi 0.13 >More info 0.65 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
266 Aerobic e1 ate2 0.24 >More info 0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
267 pap1-D/tt4 0.23 >More info 0.54 >More info Col-0 aerial part Original data
268 root cap pGL2 0h BL 0.53 >More info 0.23 >More info WR 35S 0h BL brassinosteroid root Original data
269 shoot control pSultr2:2 -0.51 >More info -0.25 >More info shoot control total Original data GEO bulk
270 camta3-2 0.06 >More info 0.70 >More info WT Original data GEO bulk
271 dor drought 0.17 >More info 0.59 >More info WT drought Original data GEO bulk
272 eds16 whole leaf 6hpi -0.19 >More info -0.57 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
273 Col-0 DCA 48h 0.18 >More info 0.58 >More info Col-0 MOCK 48h Original data GEO bulk
274 coi1-2 0.22 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
275 Imidazolinone EC50 0.21 >More info 0.55 >More info Carrier (Imidazolinone) Original data GEO bulk
276 rosette Dark Wounded 0.16 >More info 0.59 >More info rosette Dark Control Original data GEO bulk
277 C58 35dpi 0.23 >More info 0.52 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
278 Cd 24h root -0.20 >More info -0.55 >More info WT-Untreated Shoot Original data GEO bulk
279 pvip1 pvip2 0.15 >More info 0.60 >More info Col-0 whole rosettes Original data GEO bulk
280 HopZ1a treated ulp1c ulp1d 0.22 >More info 0.53 >More info col Original data GEO bulk
281 IRP1-OE-Fe--shoot 0.19 >More info 0.56 >More info COL-0-Fe--shoot shoot Original data
282 spch 0.50 >More info 0.24 >More info Col-0 WT whole seedling Original data GEO bulk
283 seedlings + TSA 0.53 >More info 0.21 >More info control seedlings 10-day old whole seedling Original data GEO bulk
284 shoot hypoxia pKAT1 -0.52 >More info -0.22 >More info shoot hypoxia total Original data GEO bulk
285 Mutant gh3.5-1D (AvrRpt2) 0.20 >More info 0.54 >More info Col-0 (AvrRpt2) Original data GEO bulk
286 upf3 0.21 >More info 0.53 >More info WT whole plant Original data GEO bulk
287 safener treated 0.18 >More info 0.56 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
288 aerial organ callus inducing medium 12 h 0.23 >More info 0.51 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
289 seed germinating in countinuous light 24h SL 0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
290 rcf1-1 cold 0h 0.19 >More info 0.55 >More info WT cold 0h Control seedlings Original data GEO bulk
291 vte2 leaves 48h LT 0.23 >More info 0.51 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
292 leaf13 0.17 >More info 0.56 >More info unwounded leaves none Original data GEO bulk
293 A. thaliana-A. lyrata hybrid -0.16 >More info -0.57 >More info A. thaliana mature leaves before flowering Original data GEO bulk
294 Leafminer damaged seedlings 0.16 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
295 gpa1 -ABA GC -0.10 >More info -0.62 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
296 pmr4-1 powdery mildew 0.15 >More info 0.56 >More info WT powdery mildew uninoculated Original data GEO bulk
297 Col ozone 2d 0.11 >More info 0.60 >More info Col clean-air 2d ozone Original data GEO bulk
298 Pst-DC3000(avrRpm1)-4hpi 0.07 >More info 0.64 >More info Pst-DC3000-4hpi Original data GEO bulk
299 TNT-seedlings 0.20 >More info 0.50 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
300 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
301 INA 0.15 >More info 0.54 >More info CK INA seedling Original data
302 HAP5-triple-mutant -0.51 >More info -0.18 >More info Col control above-ground whole plant Original data GEO bulk
303 Leafminer locally damaged thaliana seedlings 0.16 >More info 0.52 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
304 Stem tissue 2 days NAA 0.05 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
305 vtc1 (II) 0.13 >More info 0.54 >More info Col (II) rosette Original data GEO bulk
306 20d after anthesis 0.16 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
307 35S::IaTCP 0.56 >More info 0.10 >More info thaliana control secondary inflorescence Original data
308 PAHs stress 0.09 >More info 0.57 >More info exp control phenanthrene whole plants Original data GEO bulk
309 P.syringae AvrRpt2 4 h (leaf) 0.11 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
310 WT +elf18 10h 0.02 >More info 0.63 >More info WT untreated elf18 Original data GEO bulk
311 MYB12OX/tt4 0.13 >More info 0.52 >More info Col-0 aerial part Original data
312 CCA1-ox 6am non-polysomal 0.14 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
313 til1-1 22C 0.13 >More info 0.51 >More info Col-0 22C Original data GEO bulk
314 Laer Alternaria 3dpi -0.10 >More info -0.54 >More info Laer Control leaf discs Original data GEO bulk
315 eds16 whole leaf 0h UI 0.05 >More info -0.69 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
316 root - 08% oxygen - 30min 0.11 >More info 0.52 >More info root - 21% oxygen - 30min Original data GEO bulk
317 gpa1-4/agb1-2 clean-air 3h -0.04 >More info -0.59 >More info Col clean-air 3h clean-air Original data GEO bulk
318 Chitosan 3h Treatment 0.06 >More info 0.57 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
319 DC3000 7h 0.12 >More info 0.50 >More info Mock 7h DC3000 Original data GEO bulk
320 Col laser microdissected 5 dpi 0.06 >More info 0.55 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
321 vte2-1 3d vernalization 0.06 >More info 0.54 >More info WT 3d vernalization Original data GEO bulk
322 root - 01% oxygen - 2h 0.02 >More info 0.58 >More info root - 21% oxygen - 2h Original data GEO bulk
323 eds16 whole leaf 5dpi -0.01 >More info -0.59 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
324 SA Treated 0.51 >More info 0.08 >More info Water Original data GEO bulk
325 35S::HRE1 Aerobic -0.53 >More info -0.05 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
326 WT +elf18 2h -0.00 >More info 0.58 >More info WT untreated elf18 Original data GEO bulk
327 Oxidative Stress 3 h (root) -0.05 >More info -0.52 >More info Stress mock 3 h (root) Original data Stress treatments
328 SA 3h 0.02 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
329 WT seedlings NaCl -0.02 >More info -0.54 >More info WT seedlings control Seedlings Original data GEO bulk
330 WT Shoot Hypoxia 0.02 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
331 root - 08% oxygen - 2h 0.03 >More info 0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
332 cngc1-3 0.03 >More info 0.51 >More info Col-0 root Original data GEO bulk
333 GST 4 h (leaf) 0.02 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
334 IAA7mII over-expressor IAA Treated -0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
335 pepr1-1 Pepr2-3 +Pep2 10h -0.02 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
336 BAM7 Ox untreated -0.05 >More info 0.57 >More info WT untreated none shoot Original data
337 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
338 root - 04% oxygen - 2h -0.16 >More info 0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
339 WT NAA 2h 0.00 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
340 rsa3-1 Na 24h -0.09 >More info 0.58 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
341 Light -0.13 >More info 0.61 >More info Control Original data GEO bulk
342 WT 30μM phosphate 8 hours. -0.02 >More info 0.50 >More info WT control (not supplemented). Original data
343 Heat shock optimum -0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
344 Inflorescences Trp1 -0.07 >More info 0.53 >More info Inflorescences ler inflorescences Original data GEO bulk
345 P.syringae vir 4 h (leaf) -0.11 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
346 JA 3h -0.13 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
347 chito-tetramer -0.09 >More info 0.50 >More info Col Mock Original data GEO bulk
348 WT+chitooctaose -0.11 >More info 0.50 >More info WT+water chitooctaose seedlings Original data GEO bulk