4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Red Light 4 h
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Red Light 4 h "  Help Download transcriptome of top 30
Score Experiment Correlation from
Red Light 4 h 		Correlation to
Red Light 4 h 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Red Light 4 h 1.00 >More info 1.00 >More info White Light 4 h Original data Light treatments
2 Red/FR Light 4 h 0.87 >More info 0.79 >More info FarRed Light 4 h Original data Light treatments
3 Light 4h steady-state -0.81 >More info -0.70 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
4 Light 4h polysome-bound -0.81 >More info -0.67 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
5 Dark 4 h pls UV-AB 5min -0.82 >More info -0.66 >More info Dark 4 h Original data Light treatments
6 2d dark-grown WT(Col-0)/1 hr red light -0.73 >More info -0.65 >More info 2d dark-grown WT seedling Original data GEO bulk
7 Dark 40 min pls UV-A 5 min -0.66 >More info -0.69 >More info Dark 45 min Original data Light treatments
8 WT Red light 1h -0.66 >More info -0.69 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
9 Blue Light 4 h -0.73 >More info -0.62 >More info White Light 4 h Original data Light treatments
10 FarRed Light 4 h -0.72 >More info -0.60 >More info White Light 4 h Original data Light treatments
11 rGRF 0.73 >More info 0.59 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
12 WT Red light 18h -0.79 >More info -0.52 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
13 Dark 44min pls RedLigh 1min -0.61 >More info -0.67 >More info Dark 45 min Original data Light treatments
14 etiolated cop1BBX22-GFPox -0.70 >More info -0.56 >More info etiolated Col-0 whole seedlings Original data GEO bulk
15 aerial organ callus inducing medium 12 h 0.74 >More info 0.51 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
16 seedling 1.5h after HZE atm-1 0.73 >More info 0.49 >More info seedling day 1 unirradiated atm-1 1.5h Original data
17 camta1-2 0.73 >More info 0.47 >More info Col-0-WT Original data GEO bulk
18 seedling 24h after Gamma atm-1 -0.72 >More info -0.47 >More info seedling day 2 unirradiated atm-1 24h Original data
19 Night Time Treatment -0.70 >More info -0.48 >More info Night Time Control 1hr white light pulse aerial rosette Original data
20 csn4-1 mutant -0.77 >More info -0.41 >More info WT dark Original data GEO bulk
21 GV3101 3hpi 0.60 >More info 0.57 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
22 Col-0 WT HL 3h -0.73 >More info -0.44 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
23 Laer pretreat GA Flg22 1h 0.46 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
24 Shoot dark control 7h 0.68 >More info 0.48 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
25 rGRF3x35S:GIF 0.75 >More info 0.41 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
26 seedling 24h after Gamma WT -0.68 >More info -0.47 >More info seedling day 2 unirradiated WT 24h Original data
27 aerial organ callus inducing medium 24h 0.66 >More info 0.49 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
28 ga1-3 SCL3OE -0.71 >More info -0.44 >More info ga1-3 whole root Original data
29 csn3-1 dark -0.74 >More info -0.41 >More info WT dark Original data GEO bulk
30 ani1 T0.5 -0.51 >More info -0.61 >More info WT T0.5 root tissue Original data GEO bulk
31 Day Time Treatment -0.68 >More info -0.44 >More info Day Time Control 1hr white light pulse aerial rosette Original data
32 Shoot dark control 24h 0.65 >More info 0.47 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
33 Dark 4 h pls UV-A 5 min -0.67 >More info -0.45 >More info Dark 4 h Original data Light treatments
34 Dark 40min pls UV-AB 5min -0.60 >More info -0.52 >More info Dark 45 min Original data Light treatments
35 Heat shock optimum 0.47 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
36 WT Seedling BL -0.69 >More info -0.43 >More info WT Seedling Dark Original data GEO bulk
37 Shoot submergence 24h 0.65 >More info 0.46 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
38 C58 3hpi 0.69 >More info 0.42 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
39 csn5 (csn5a-2 csn5b) dark -0.74 >More info -0.36 >More info WT dark Original data GEO bulk
40 WT Na2S -0.74 >More info -0.35 >More info WT water Na2S leaf Original data GEO bulk
41 seedling 1.5h after HZE WT 0.71 >More info 0.38 >More info seedling day 1 unirradiated WT 1.5h Original data
42 mkk1 24h BTH rep 0.59 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
43 E.orontii Infection 3 day 0.53 >More info 0.55 >More info Uninfection 3 day Original data Elicitor treatments
44 cpr5npr1svi1 0.56 >More info 0.52 >More info WT(COL) Original data GEO bulk
45 aerial organ callus inducing medium 48 h 0.64 >More info 0.44 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
46 mkk2 24h BTH rep 0.58 >More info 0.48 >More info Col-0 24h BTH rep Original data GEO bulk
47 vtc2 (I) 0.69 >More info 0.37 >More info Col (I) rosette Original data GEO bulk
48 Drought Stress 24 h (shoot) 0.67 >More info 0.39 >More info Stress mock 24 h (shoot) Original data Stress treatments
49 1 h Light Total RNA -0.62 >More info -0.44 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
50 petiole in D 0.55 >More info 0.51 >More info petiole in WL petioles Original data GEO bulk
51 35SpBVR3 0.67 >More info 0.39 >More info WT Original data GEO bulk
52 essp3/brm5 mutant -0.74 >More info -0.31 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
53 erf104-ko H2O 4h -0.66 >More info -0.39 >More info Col-0 H2O 4h Original data GEO bulk
54 petiole in FRD 0.60 >More info 0.44 >More info petiole in WL petioles Original data GEO bulk
55 30m light -0.71 >More info -0.33 >More info before light whole seedlings Original data GEO bulk
56 bHLH122 ox -0.51 >More info -0.52 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
57 aerial organ callus inducing medium 96 h 0.59 >More info 0.44 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
58 short 12-degree- -0.51 >More info -0.51 >More info control short Original data GEO bulk
59 cpr5scv1 0.57 >More info 0.45 >More info WT(COL) Original data GEO bulk
60 Col(gl) 0mM NaCl 0.65 >More info 0.37 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
61 npr1 sni1 ssn2 -0.66 >More info -0.36 >More info npr1 sni1 water water seedling Original data GEO bulk
62 Col(gl) leaf 0mM NaCl 0.65 >More info 0.37 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
63 phyB Dark -0.55 >More info -0.47 >More info WT(Ler) Dark Original data GEO bulk
64 Leafminer damaged seedlings 0.46 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
65 cop1 Seedling BL+ABA -0.66 >More info -0.35 >More info WT Seedling BL+ABA Original data GEO bulk
66 60m light -0.67 >More info -0.34 >More info before light whole seedlings Original data GEO bulk
67 Col-O low light 0.73 >More info 0.27 >More info Col-O bule light Original data GEO bulk
68 Pseudomonas 0.58 >More info 0.42 >More info Control pseudomonas treated whole seedling Original data GEO bulk
69 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
70 Atss3 Light1 -0.61 >More info -0.38 >More info Atss3 Dark0.5 Original data GEO bulk
71 P.p 10.5hai 0.52 >More info 0.47 >More info At-Control roots Original data GEO bulk
72 gun1-1 +lincomycin -0.60 >More info -0.39 >More info Col-0 +lincomycin Original data GEO bulk
73 tetraploid 0.65 >More info 0.34 >More info diploid Original data GEO bulk
74 12m.KCl 0.58 >More info 0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
75 Light 0.5h polysome-bound -0.55 >More info -0.43 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
76 3x(p) 0.50 >More info 0.48 >More info 2x two week old seedlings Original data
77 35S::ERF104 H2O 4h -0.63 >More info -0.35 >More info Col-0 H2O 4h Original data GEO bulk
78 shl-2 Pool 0.63 >More info 0.35 >More info Ler Pool seedling Original data GEO bulk
79 phyAphyB Dark 0.52 >More info 0.46 >More info phyB Dark Original data GEO bulk
80 35S:GIF 0.68 >More info 0.28 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
81 Col-0 INA 6d 0.60 >More info 0.36 >More info Col-0 MOCK 6d Original data GEO bulk
82 mkk2 control rep 0.55 >More info 0.41 >More info Col-0 Time 0 rep Original data GEO bulk
83 Dark 6h ivd 0.67 >More info 0.29 >More info 0h ivd Original data
84 MIL4 ox BTH 0.56 >More info 0.39 >More info Col BTH Original data GEO bulk
85 atmospheric CO2 low Mg shoot 0.68 >More info 0.27 >More info atmospheric CO2 normal Mg shoot Shoot Original data
86 sid2-2 24hpi A. brassicicola -0.66 >More info -0.29 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
87 abi4 vtc2 (I) 0.59 >More info 0.36 >More info Col (I) rosette Original data GEO bulk
88 WT light -0.55 >More info -0.39 >More info WT dark Original data GEO bulk
89 ga1-3 scl3-1 -0.60 >More info -0.34 >More info ga1-3 whole root Original data
90 pip3 At2g19270 RNAi 24 -0.65 >More info -0.29 >More info Nd-1 whole plant Original data GEO bulk
91 Atss3 Light4 -0.58 >More info -0.36 >More info Atss3 Dark0.5 Original data GEO bulk
92 mutant acs6E (single mutant) -0.61 >More info -0.33 >More info col control (single mutant) Original data GEO bulk
93 oas-a1.1 root -0.44 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
94 pip3 At2g19270 RNAi 32 -0.68 >More info -0.25 >More info Nd-1 whole plant Original data GEO bulk
95 OsRLCK253 expressing -0.56 >More info -0.37 >More info WT seedlings Original data GEO bulk
96 rosette leaves fdh 0.63 >More info 0.30 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
97 Mutant hy5 (High Light) 0.62 >More info 0.31 >More info Col-0 (High Light) Original data GEO bulk
98 hy5 high light 0.62 >More info 0.31 >More info Col-O high light Original data GEO bulk
99 WT(Ler) Rc50 -0.52 >More info -0.41 >More info WT(Ler) Dark Original data GEO bulk
100 Col-0 0h NAA 0.67 >More info 0.25 >More info Col-0 6h MOCK Original data GEO bulk
101 Col-0 DEX Shade 0.54 >More info 0.38 >More info Col-0 DEX WL seedlings Original data
102 WT cold -0.62 >More info -0.30 >More info WT control All aerial tissue Original data GEO bulk
103 hepta mutant (higher order mutant) 0.63 >More info 0.29 >More info col control (higher order mutant) Original data GEO bulk
104 Dark 4 h pls RedLight 1min -0.53 >More info -0.38 >More info Dark 4 h Original data Light treatments
105 Cd 18h root -0.60 >More info -0.31 >More info WT-Untreated Root Original data GEO bulk
106 MIL4 ox 0.61 >More info 0.30 >More info Col Original data GEO bulk
107 mbd6 mutant thaliana 10-day-old seedling 0.54 >More info 0.36 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
108 Col-0 48 hpi 0.54 >More info 0.36 >More info Col-0 uninoculated Original data GEO bulk
109 D2O 0.53 >More info 0.37 >More info H2O seedling Original data GEO bulk
110 ptpks2 -0.61 >More info -0.29 >More info Col-WT leaves Original data GEO bulk
111 light -0.72 >More info -0.18 >More info dark light seedling Original data GEO bulk
112 Col(gl) leaf 100mM NaCl 0.60 >More info 0.30 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
113 Col(gl) 100mM NaCl 0.60 >More info 0.30 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
114 M6PR transgenic leaf 0mM NaCl 0.61 >More info 0.29 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
115 WT Rc50 -0.51 >More info -0.38 >More info WT Dark red light whole seedling Original data GEO bulk
116 tt4 0.53 >More info 0.36 >More info Col-0 aerial part Original data
117 mkk1/mkk2 control rep 0.51 >More info 0.38 >More info Col-0 Time 0 rep Original data GEO bulk
118 nas4x leaves + Fe 0.37 >More info 0.52 >More info WT leaves + Fe Leaves Original data GEO bulk
119 abi4-102 (I) 0.60 >More info 0.29 >More info Col (I) rosette Original data GEO bulk
120 ein2-1 24hpi A. brassicicola -0.61 >More info -0.27 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
121 Dark 1day wt 0.64 >More info 0.24 >More info 0h wt Original data
122 sdg8-2 mutant -0.66 >More info -0.22 >More info wild type leaf Original data GEO bulk
123 dTLEc systemic wounding 0.52 >More info 0.35 >More info wt systemic wounding leaves Original data GEO bulk
124 Dark 2day wt 0.60 >More info 0.27 >More info 0h wt Original data
125 penta mutant (higher order mutant) 0.51 >More info 0.36 >More info col control (higher order mutant) Original data GEO bulk
126 dde2-2 24hpi A. brassicicola -0.57 >More info -0.30 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
127 CHLM overexpression -0.57 >More info -0.30 >More info Col-0 estr green tissue Original data GEO bulk
128 Dark 6h wt 0.65 >More info 0.21 >More info 0h wt Original data
129 MYB12OX/tt4 0.54 >More info 0.31 >More info Col-0 aerial part Original data
130 sid2-2 safener -0.64 >More info -0.20 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
131 upb1-1 elongation zone -0.50 >More info -0.34 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
132 Dark 1day hml 0.61 >More info 0.23 >More info 0h hml Original data
133 hexa mutant (higher order mutant) 0.61 >More info 0.23 >More info col control (higher order mutant) Original data GEO bulk
134 Mutant cry1 (High Light) 0.57 >More info 0.27 >More info Col-0 (High Light) Original data GEO bulk
135 Laer Pst DC3000 12hpi 0.61 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
136 Leafminer systemically damaged thaliana seedlings 0.59 >More info 0.25 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
137 mutant acs2B (single mutant) -0.61 >More info -0.23 >More info col control (single mutant) Original data GEO bulk
138 cry1 high light 0.57 >More info 0.27 >More info Col-O high light Original data GEO bulk
139 15m.KCl 0.59 >More info 0.25 >More info To. KCl 14 day old Roots Original data GEO bulk
140 rrd2 IBA 0.51 >More info 0.32 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
141 C24-3h IAA 0.54 >More info 0.29 >More info C24-0h IAA whole plant Original data GEO bulk
142 spx1 spx2 resupplied Pi 4h 0.59 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
143 aba2 1% sucrose 12-day-old 0.71 >More info 0.12 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
144 Dark 1day ivd 0.63 >More info 0.19 >More info 0h ivd Original data
145 ebs Pool 0.56 >More info 0.26 >More info Ler Pool seedling Original data GEO bulk
146 WT hypoxia 0.51 >More info 0.31 >More info WT normoxia whole rosette Original data
147 lht1 untreated -0.68 >More info -0.14 >More info WT untreated untreated leaf Original data GEO bulk
148 Cs root 0.53 >More info 0.29 >More info control root Original data GEO bulk
149 Dark 3day wt 0.59 >More info 0.23 >More info 0h wt Original data
150 piffq FR 3h -0.50 >More info -0.31 >More info WT FR 3h whole seedling Original data GEO bulk
151 Dry midnight -0.52 >More info -0.29 >More info Wet midnight water-limited whole rosette Original data GEO bulk
152 Cycloheximide 3 h 0.53 >More info 0.28 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
153 WT 90-105 min Xanthomonas -0.63 >More info -0.18 >More info WT T0 Original data GEO bulk
154 Pst-DC3000(hrpA)-4hpi 0.28 >More info 0.53 >More info Pst-DC3000-4hpi Original data GEO bulk
155 Col-0 DCA 6d 0.60 >More info 0.21 >More info Col-0 MOCK 6d Original data GEO bulk
156 eto1-4 + AVG 0.57 >More info 0.24 >More info eto1-4 whole seedling Original data GEO bulk
157 Col-0 +lincomycin 0.53 >More info 0.27 >More info Col-0 -lincomycin Original data GEO bulk
158 Dark 6h hml 0.62 >More info 0.18 >More info 0h hml Original data
159 Col-0 low oxygen 0.50 >More info 0.30 >More info Col-0 Original data GEO bulk
160 C24 24h cold -0.56 >More info -0.24 >More info Col 24h cold leaf Original data GEO bulk
161 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
162 mil4 sid2 0.54 >More info 0.25 >More info Col rosettes Original data GEO bulk
163 Dark 3day ivd 0.52 >More info 0.27 >More info 0h ivd Original data
164 4x 0.54 >More info 0.25 >More info 2x two week old seedlings Original data
165 vte1-1 3d vernalization -0.50 >More info -0.28 >More info WT 3d vernalization Original data GEO bulk
166 Laer Alternaria 3dpi 0.65 >More info 0.13 >More info Laer Control leaf discs Original data GEO bulk
167 csn3-1 light -0.66 >More info -0.12 >More info WT light Original data GEO bulk
168 nhx6 0.60 >More info 0.18 >More info WT Rosette leaf Original data GEO bulk
169 essp4/sdg8-5 mutant -0.60 >More info -0.18 >More info wild type leaf Original data GEO bulk
170 tumour 0.54 >More info 0.24 >More info non-tumor tumour Original data GEO bulk
171 det2 light-dark 0.58 >More info 0.19 >More info det2 light light-dark Original data GEO bulk
172 phyB mutant 16C 10hrs -0.64 >More info -0.13 >More info 16C 10h whole plant excluding roots Original data GEO bulk
173 35S:LOB-GR DEX -0.55 >More info -0.21 >More info Col DEX dexamethasone seedling Original data GEO bulk
174 long 12-degree- -0.50 >More info -0.26 >More info control long Original data GEO bulk
175 toc1-1-89hr -0.51 >More info -0.25 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
176 Dark 3day hml 0.54 >More info 0.21 >More info 0h hml Original data
177 Dark 2day hml 0.57 >More info 0.18 >More info 0h hml Original data
178 npr1 sni1 SA 0.55 >More info 0.20 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
179 Heat no recovery -0.50 >More info -0.24 >More info Mock no recovery seedling Original data GEO bulk
180 UV -0.58 >More info -0.16 >More info WT aerial region Original data GEO bulk
181 seedling 1.5h after Gamma WT -0.53 >More info -0.21 >More info seedling day 1 unirradiated WT 1.5h Original data
182 cop1 Seedling Dark -0.52 >More info -0.21 >More info WT Seedling Dark Original data GEO bulk
183 seedling 3h after HZE WT 0.71 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
184 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.50 >More info 0.23 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
185 COL-0-Fe--shoot -0.57 >More info -0.16 >More info COL-0-Ctrl--shoot shoot Original data
186 pmr5 0.55 >More info 0.17 >More info Col-0 rosette Original data GEO bulk
187 sid2-2 mock -0.59 >More info -0.13 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
188 hen1 -0.54 >More info -0.18 >More info Ler Original data GEO bulk
189 root longitudinal zone-4 low sulfur 0.51 >More info 0.21 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
190 RPL18 TuMV inoculated polysomal RNA 0.57 >More info 0.14 >More info mock inoculated polysomal RNA PO Original data GEO bulk
191 Fei-0-3h IAA 0.51 >More info 0.20 >More info Fei-0-0h IAA whole plant Original data GEO bulk
192 mp-B4149 mutant IAA -0.53 >More info -0.18 >More info GR-bdl IAA Original data GEO bulk
193 msh1 stunt -0.52 >More info -0.18 >More info WT Col-0 above ground part of plant Original data GEO bulk
194 rpl24 total 0.51 >More info 0.19 >More info WT total seedling shoot/aerial seedling Original data
195 Whole root - S 12H -0.57 >More info -0.13 >More info Whole root - S 0H Original data GEO bulk
196 npr1 sni1 brca2a -0.55 >More info -0.14 >More info npr1 sni1 water water seedling Original data GEO bulk
197 atmyc2 cop1 Seedling Dark -0.51 >More info -0.18 >More info WT Seedling Dark Original data GEO bulk
198 hy5 low light 0.51 >More info 0.18 >More info Col-O low light Original data GEO bulk
199 Mutant hy5 0.51 >More info 0.18 >More info Col-0 Original data GEO bulk
200 des1 water -0.58 >More info -0.11 >More info WT water water leaf Original data GEO bulk
201 cop1 Seedling BL -0.59 >More info -0.10 >More info WT Seedling BL Original data GEO bulk
202 sfr3 control -0.51 >More info -0.18 >More info WT control All aerial tissue Original data GEO bulk
203 WT zebularine 5d -0.64 >More info -0.04 >More info WT mock 5d shoot apical meristem Original data
204 Shoot submergence 7h 0.68 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
205 Whole root - S 3H -0.52 >More info -0.16 >More info Whole root - S 0H Original data GEO bulk
206 pab total -0.50 >More info -0.18 >More info WT total seedling shoot/aerial seedling Original data
207 Col0-PsmES4326-24hpi 0.07 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
208 SOS1 0mM NaCl 0.51 >More info 0.16 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
209 nhx5-1/nhx6 0.51 >More info 0.16 >More info WT Rosette leaf Original data GEO bulk
210 atmyc2 cop1 Seedling BL -0.61 >More info -0.05 >More info WT Seedling BL Original data GEO bulk
211 ahg2-1sid2-2 -0.73 >More info 0.07 >More info WT (Col) control Original data GEO bulk
212 cca1-lhy 30m light 0.60 >More info 0.05 >More info 30m light whole seedlings Original data GEO bulk
213 RPL18 TuMV inoculated total RNA 0.60 >More info 0.05 >More info mock inoculated total RNA PO Original data GEO bulk
214 Bay-0-3h IAA 0.50 >More info 0.14 >More info Bay-0-0h IAA whole plant Original data GEO bulk
215 OsTOP6A1 ox -0.50 >More info -0.14 >More info Seedling WT Original data GEO bulk
216 WT-Dry -0.61 >More info -0.03 >More info WT-CK dehydration treatment 1h Original data
217 CHLD reduction -0.50 >More info -0.14 >More info Col-0 dex green tissue Original data GEO bulk
218 lht1 PstDC3000 48h -0.62 >More info -0.02 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
219 csn5 (csn5a-2 csn5b) light -0.60 >More info -0.03 >More info WT light Original data GEO bulk
220 4tga mock -0.55 >More info -0.07 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
221 root - 01% oxygen - 2h 0.52 >More info 0.10 >More info root - 21% oxygen - 2h Original data GEO bulk
222 4C 0h -0.55 >More info -0.06 >More info 22C 0h Original data GEO bulk
223 csn4-1 dark -0.56 >More info -0.04 >More info WT light Original data GEO bulk
224 inhibitor A Treated -0.53 >More info -0.06 >More info Negative Control Original data GEO bulk
225 an3-4 leaf primordia 0.52 >More info 0.07 >More info WT leaf primordia Original data GEO bulk
226 8-DAC chr11-1chr17-1 -0.50 >More info -0.09 >More info 8-DAC Col-0 leaf explants Original data
227 gapcp1gapcp2 ABA 0.04 >More info 0.54 >More info WT ABA ABA seedling Original data GEO bulk
228 agb1 +ABA LF -0.08 >More info -0.50 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
229 Leaf wounded -0.55 >More info -0.02 >More info Leaf control vegetative leaf Original data GEO bulk
230 opr3 OPDA 2 h 0.06 >More info 0.50 >More info opr3 0 h Original data GEO bulk
231 Dark 2day ivd 0.57 >More info -0.01 >More info 0h ivd Original data
232 etiolated cop1 -0.59 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
233 Leaf systemic -0.54 >More info 0.00 >More info Leaf control vegetative leaf Original data GEO bulk
234 epiF3 -0.58 >More info 0.04 >More info WT Col-0 aerial part Original data
235 siliques AtHb1 control 0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
236 ahg2-1 -0.51 >More info -0.01 >More info WT (Col) control Original data GEO bulk
237 amiR-tor induced 6d -0.56 >More info 0.06 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
238 Shoot P recovery 0.54 >More info -0.06 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
239 Full C2 T3 -0.07 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
240 swn-7 0.53 >More info -0.07 >More info Col whole plant Original data GEO bulk
241 Red/FR Light45min 0.20 >More info -0.66 >More info FarRed Light 45min Original data Light treatments
242 myb triple mutant 8h-pollinated ms1 0.53 >More info -0.08 >More info WT 8h-pollinated pistil Original data GEO bulk
243 IAA 1 h 0.51 >More info -0.06 >More info Mock 1 h Original data Basic hormone treatment of seedlings
244 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
245 seedling 1.5h after Gamma atm-1 -0.50 >More info 0.08 >More info seedling day 1 unirradiated atm-1 1.5h Original data
246 CeO2 germinant 0.15 >More info -0.57 >More info Millipore Water germinant CeO2 seedling Original data
247 bio4-1 mutant leaves -0.10 >More info 0.51 >More info WT leaves leaves Original data GEO bulk
248 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
249 bri1-116 -0.38 >More info 0.73 >More info Col seedling Original data GEO bulk
250 seed germinating in countinuous light 24h SL -0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
251 ARR22-ox -0.50 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings