4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT NAA 1h
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List of experiments correlated with "WT NAA 1h"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT NAA 1h		 Correlation to
WT NAA 1h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT NAA 1h 1.00 >More info 1.00 >More info WT 0h Leaf tissue Original data GEO bulk
2 WT NAA 2h 0.81 >More info 0.81 >More info WT 0h Leaf tissue Original data GEO bulk
3 WT NAA/flg 2h 0.82 >More info 0.79 >More info WT 0h Leaf tissue Original data GEO bulk
4 WT NAA/flg 1h 0.83 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
5 IAA 1 h 0.73 >More info 0.69 >More info Mock 1 h Original data Basic hormone treatment of seedlings
6 IAA 0.5 h 0.68 >More info 0.73 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
7 Col-0 shade 0.80 >More info 0.59 >More info Col-0 light seedlings Original data GEO bulk
8 Laer pretreat GA Flg22 1h 0.62 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
9 Cycloheximide 3 h 0.74 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
10 WT+chitooctaose 0.66 >More info 0.65 >More info WT+water chitooctaose seedlings Original data GEO bulk
11 Bur-0-30min IAA 0.78 >More info 0.52 >More info Bur-0h IAA whole plant Original data GEO bulk
12 C24-1h IAA 0.73 >More info 0.56 >More info C24-0h IAA whole plant Original data GEO bulk
13 GR-bdl DEX IAA -0.61 >More info -0.68 >More info GR-bdl IAA Original data GEO bulk
14 Bur-0-1h IAA 0.76 >More info 0.52 >More info Bur-0h IAA whole plant Original data GEO bulk
15 seedlings protease IV 0.62 >More info 0.64 >More info seedlings nontreated control whole seedling Original data
16 petiole in FRD 0.75 >More info 0.49 >More info petiole in WL petioles Original data GEO bulk
17 C58 3hpi 0.63 >More info 0.60 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
18 Bay-0-30min IAA 0.70 >More info 0.51 >More info Bay-0-0h IAA whole plant Original data GEO bulk
19 WT flg22 1h 0.47 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
20 Fei-0-1h IAA 0.70 >More info 0.50 >More info Fei-0-0h IAA whole plant Original data GEO bulk
21 GST 4 h (leaf) 0.46 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
22 slr-1 2h NAA -0.79 >More info -0.40 >More info Col-0 2h NAA Original data GEO bulk
23 ex2 flu dark 8hours/30 minute light 0.64 >More info 0.54 >More info col dark 8hours/30 minute light Original data GEO bulk
24 miR393 flg22 1h 0.49 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
25 Sha-1h IAA 0.72 >More info 0.45 >More info Sha-0h IAA whole plant Original data GEO bulk
26 low R/FR mock spray 0.62 >More info 0.54 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
27 Col-0-1h IAA 0.72 >More info 0.44 >More info Col-0-0h IAA whole plant Original data GEO bulk
28 Sha-30min IAA 0.69 >More info 0.47 >More info Sha-0h IAA whole plant Original data GEO bulk
29 leaf blade in FRD 0.71 >More info 0.45 >More info leaf blade in WL leaf blades Original data GEO bulk
30 WT Atum 1h 0.51 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
31 Bay-0-1h IAA 0.75 >More info 0.40 >More info Bay-0-0h IAA whole plant Original data GEO bulk
32 WT seedlings IAA 0.83 >More info 0.32 >More info WT seedlings control Seedlings Original data GEO bulk
33 WT flg22 2h 0.39 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
34 pepr1-1 Pepr2-3 +Pep2 2h -0.55 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
35 AFB1 flg22 1h 0.47 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
36 IAA Treated 0.64 >More info 0.49 >More info Negative Control Original data GEO bulk
37 IAA 3 h 0.69 >More info 0.43 >More info Mock 3 h Original data Basic hormone treatment of seedlings
38 gun5 control 0.58 >More info 0.53 >More info Col-0 control Original data GEO bulk
39 9 hr Hypoxia 1 hr recovery Total RNA 0.55 >More info 0.54 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
40 Phaseolicola 2 h (leaf) 0.44 >More info 0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
41 Fei-0-30min IAA 0.62 >More info 0.47 >More info Fei-0-0h IAA whole plant Original data GEO bulk
42 3x(m) 0.49 >More info 0.60 >More info 2x two week old seedlings Original data
43 Col-0-30min IAA 0.64 >More info 0.44 >More info Col-0-0h IAA whole plant Original data GEO bulk
44 Bur-0-3h IAA 0.71 >More info 0.37 >More info Bur-0h IAA whole plant Original data GEO bulk
45 pif4pif5 mut 24h FR -0.56 >More info -0.52 >More info WT 24h FR Original data GEO bulk
46 OE WRKY63.3 high light 0.46 >More info 0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
47 col-5 DC3000 4h 0.48 >More info 0.60 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
48 Flagellin 4 h (leaf) 0.38 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
49 C24-30min IAA 0.59 >More info 0.46 >More info C24-0h IAA whole plant Original data GEO bulk
50 BI-1-1h IAA 0.74 >More info 0.30 >More info BI-1-0h IAA whole plant Original data GEO bulk
51 C24-3h IAA 0.71 >More info 0.33 >More info C24-0h IAA whole plant Original data GEO bulk
52 AFB1 flg22 2h 0.38 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
53 NAA 3h 0.71 >More info 0.32 >More info before treatment NAA root Original data GEO bulk
54 IAA 0.5h 0.61 >More info 0.42 >More info control 0.5h root Original data GEO bulk
55 sav3-2 shade -0.67 >More info -0.36 >More info Col-0 shade seedlings Original data GEO bulk
56 Mutant sav3-2 (SH) -0.67 >More info -0.36 >More info Col-0 (SH) Original data GEO bulk
57 Seedling KUA1-IOX est 0.37 >More info 0.66 >More info Seedling KUA1-IOX mock Original data
58 Chitin 0.54 >More info 0.47 >More info Col C Original data GEO bulk
59 Col-0 2h NAA 0.56 >More info 0.45 >More info Col-0 6h MOCK Original data GEO bulk
60 IAA 1h 0.67 >More info 0.34 >More info control 1h root Original data GEO bulk
61 3x(p) 0.61 >More info 0.40 >More info 2x two week old seedlings Original data
62 opr3 OPDA 0.5 h 0.54 >More info 0.47 >More info opr3 0 h Original data GEO bulk
63 IAA/inhibitor B Treated 0.46 >More info 0.55 >More info IAA Treated Original data GEO bulk
64 oligomycin 1 h 0.37 >More info 0.64 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
65 +1.6 mM Tween 20 1 h. 0.49 >More info 0.52 >More info +distilled water 1 h. Original data GEO bulk
66 Col-0 INA 48h 0.51 >More info 0.49 >More info Col-0 MOCK 48h Original data GEO bulk
67 HARAP aerobic -0.57 >More info -0.43 >More info WT aerobic aerobic Original data GEO bulk
68 gai Control 0.62 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
69 ANOXIA -0.36 >More info -0.64 >More info ANOXIA+SUCROSE Original data GEO bulk
70 Col-0 low R/FR 0.59 >More info 0.40 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
71 amiRAP aerobic -0.51 >More info -0.48 >More info WT aerobic aerobic Original data GEO bulk
72 hsfa2 KO -0.58 >More info -0.41 >More info WT (Col-0) whole seedling Original data GEO bulk
73 miR393 0h -0.43 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
74 Laer GA 2h -0.59 >More info -0.39 >More info Laer Control leaf discs Original data GEO bulk
75 R. solani AG8 0.50 >More info 0.48 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
76 dicamba 0.66 >More info 0.32 >More info WT mock whole seedling Original data GEO bulk
77 SA 4mM 0.35 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
78 shoot-10 μM DEX- 24hr 0.53 >More info 0.44 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
79 WT +elf18 2h 0.45 >More info 0.52 >More info WT untreated elf18 Original data GEO bulk
80 Chemically 0.63 >More info 0.33 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
81 FarRed Light 45min 0.46 >More info 0.50 >More info White Light 45min Original data Light treatments
82 efr-1 +elf18 10h -0.37 >More info -0.59 >More info WT +elf18 10h elf18 Original data GEO bulk
83 Col0 roots 2hr KNO3 nitrogen -0.36 >More info -0.60 >More info Col0 roots 2hr KCl control root Original data GEO bulk
84 WT AntimycinA 3h 0.39 >More info 0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
85 WT hypoxia 0.65 >More info 0.28 >More info WT normoxia whole rosette Original data
86 CCA14 dark late 0.67 >More info 0.26 >More info Col dark late Original data GEO bulk
87 eds16 whole leaf 0h UI -0.50 >More info -0.43 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
88 5-Triiodobenzoic acid3 h 0.35 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
89 CAX1/CAX3 mutant 0.42 >More info 0.51 >More info Col whole plant Original data GEO bulk
90 Col-0 Mock Shade 0.70 >More info 0.22 >More info Col-0 Mock WL seedlings Original data
91 flu dark 8hours/30 minute light 0.30 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
92 tunicamycin -0.35 >More info -0.57 >More info DMF Original data GEO bulk
93 AFB1 0h 0.19 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
94 low R/FR JA spray 0.42 >More info 0.50 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
95 ex1 flu dark 8hours/30 minute light 0.61 >More info 0.30 >More info col dark 8hours/30 minute light Original data GEO bulk
96 Sha-3h IAA 0.71 >More info 0.20 >More info Sha-0h IAA whole plant Original data GEO bulk
97 Col-0 mbs1-1 HL 3h -0.34 >More info -0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
98 Mutant nph4-1 (IAA) -0.56 >More info -0.34 >More info Col (IAA) Original data GEO bulk
99 35SPaWRKY1 0.57 >More info 0.33 >More info Vector Seedlings including shoot and root Original data GEO bulk
100 pericycle auxin 0.62 >More info 0.27 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
101 PNO8 3 h 0.27 >More info 0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
102 bZIP1ko mutant N+Light- 0.26 >More info 0.63 >More info WT-sib N+Light- whole plant Original data GEO bulk
103 piffq FR 1h -0.69 >More info -0.20 >More info WT FR 1h whole seedling Original data GEO bulk
104 Mutant nph4-1_arf19-1 (IAA) -0.60 >More info -0.28 >More info Col (IAA) Original data GEO bulk
105 columella auxin 0.57 >More info 0.31 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
106 hsfa1 quadruple mutant -0.59 >More info -0.29 >More info WT (Col-0) whole seedling Original data GEO bulk
107 IAA 2h 0.67 >More info 0.20 >More info control 2h root Original data GEO bulk
108 E.orontii Infection 3 day 0.60 >More info 0.27 >More info Uninfection 3 day Original data Elicitor treatments
109 AVG 3 h -0.51 >More info -0.36 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
110 col-5 hrpA 4h 0.30 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
111 FarRed Light 4 h -0.54 >More info -0.32 >More info White Light 4 h Original data Light treatments
112 MPK6 ox Root Hypoxia 0.56 >More info 0.30 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
113 CeO2 germinant -0.31 >More info -0.55 >More info Millipore Water germinant CeO2 seedling Original data
114 intact root auxin 0.70 >More info 0.16 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
115 shoot hypoxia pKAT1 -0.58 >More info -0.28 >More info shoot hypoxia total Original data GEO bulk
116 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
117 Light 0.5h steady-state -0.54 >More info -0.31 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
118 coi1-2 0.32 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
119 S14-150 0.30 >More info 0.55 >More info wt Original data GEO bulk
120 high R/FR -0.72 >More info -0.13 >More info low R/FR high R/FR (control) mock spray Original data GEO bulk
121 Mutant arf2-6 -0.50 >More info -0.35 >More info Col Original data GEO bulk
122 camta1-2 0.53 >More info 0.31 >More info Col-0-WT Original data GEO bulk
123 Paclobutrazol 12 h -0.19 >More info -0.65 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
124 DC3000 hrcC 2 h (leaf) 0.31 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
125 PIF5ox low R/FR -0.53 >More info -0.30 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
126 control leaf (cmt 5d) -0.54 >More info -0.29 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
127 AvrRpm1 2 h (leaf) 0.22 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
128 Lipopolysaccaride4 h (leaf) 0.13 >More info 0.70 >More info Mock 4 h (leaf) Original data Elicitor treatments
129 IRP1-OE-Fe--shoot -0.78 >More info -0.04 >More info COL-0-Fe--shoot shoot Original data
130 Laer pretreat GA Flg22 0h 0.58 >More info 0.24 >More info Laer pretreat water control leaf discs Original data GEO bulk
131 Stem tissue 5 days NAA 0.61 >More info 0.21 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
132 PRR5-VP 6h light on -0.63 >More info -0.18 >More info WT 6h light on whole plant Original data GEO bulk
133 chito-octamer 0.24 >More info 0.57 >More info Col Mock Original data GEO bulk
134 BI-1-30min IAA 0.63 >More info 0.17 >More info BI-1-0h IAA whole plant Original data GEO bulk
135 epidermis auxin 0.61 >More info 0.19 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
136 IPT8 induced 24h 0.66 >More info 0.14 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
137 root - 04% oxygen - 48h 0.50 >More info 0.30 >More info root - 21% oxygen - 48h Original data GEO bulk
138 flu over-tAPX 0.17 >More info 0.63 >More info WT Col Original data GEO bulk
139 seedlings-week-old RECA1-overexpressing
transgenic		 0.30 >More info 0.50 >More info seedlings-week-old Col-0 seedlings Original data
140 ein3-1eil1-1 dark 0.61 >More info 0.18 >More info Wt dark whole 4-day old etiolated seedlings Original data GEO bulk
141 Heat shock 20%Inhibition 0.62 >More info 0.17 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
142 Col-0 6h NAA 0.67 >More info 0.12 >More info Col-0 6h MOCK Original data GEO bulk
143 GST NPP1 4 h (leaf) 0.16 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
144 miR393 flg22 2h 0.07 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
145 WT+H2O2 0.23 >More info 0.56 >More info WT H2O2 Original data GEO bulk
146 Bay-0-3h IAA 0.67 >More info 0.11 >More info Bay-0-0h IAA whole plant Original data GEO bulk
147 35S:miR396 0.65 >More info 0.13 >More info WT 0 days-old seedlings. Original data GEO bulk
148 slr-1 6h NAA -0.73 >More info -0.05 >More info Col-0 6h NAA Original data GEO bulk
149 MYB12OX/tt4 0.58 >More info 0.19 >More info Col-0 aerial part Original data
150 er-2 -0.51 >More info -0.26 >More info WT developing inflorescence tips Original data GEO bulk
151 Cold Stress 24 h (root) 0.52 >More info 0.25 >More info Stress mock 24 h (root) Original data Stress treatments
152 35S-MIF1 dark grown -0.73 >More info -0.03 >More info Dark-grown WT control Original data GEO bulk
153 IAA/inhibitor A Treated 0.20 >More info 0.56 >More info IAA Treated Original data GEO bulk
154 chito-tetramer 0.19 >More info 0.57 >More info Col Mock Original data GEO bulk
155 shoot-10 μM DEX- 6 hr 0.26 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
156 BI-1-3h IAA 0.65 >More info 0.10 >More info BI-1-0h IAA whole plant Original data GEO bulk
157 Uniconazole 3 h -0.51 >More info -0.24 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
158 axr2-BR -0.51 >More info -0.24 >More info BR BR dark-grown seedlings Original data GEO bulk
159 abi4-102 +lincomycin 0.74 >More info 0.01 >More info Col-0 +lincomycin Original data GEO bulk
160 P.p 2.5hai 0.25 >More info 0.50 >More info At-Control roots Original data GEO bulk
161 plant (tga2-5-6) 4h control 0.57 >More info 0.17 >More info plant (Col-0) 4h control Original data GEO bulk
162 seedling 6h after HZE WT 0.54 >More info 0.20 >More info seedling day 1 unirradiated WT 6h Original data
163 IAA7mII over-expressor mock -0.53 >More info -0.21 >More info empty vector mock Original data GEO bulk
164 Mutant axr3-1 -0.73 >More info -0.01 >More info Col Original data GEO bulk
165 Mutant tga2_5_6 0.57 >More info 0.17 >More info Col-0 Original data GEO bulk
166 atmospheric CO2 low Mg shoot 0.54 >More info 0.20 >More info atmospheric CO2 normal Mg shoot Shoot Original data
167 flu 0.15 >More info 0.59 >More info WT Col Original data GEO bulk
168 WT seedlings MV 0.24 >More info 0.50 >More info WT seedlings control Seedlings Original data GEO bulk
169 pap1-D/tt4 0.56 >More info 0.17 >More info Col-0 aerial part Original data
170 SPT4-R3 seedlings0 DAS -0.56 >More info -0.17 >More info Col-0 seedlings0 DAS seedlings Original data
171 Laer pretreat GA+JA Flg22 0h 0.55 >More info 0.18 >More info Laer pretreat water control leaf discs Original data GEO bulk
172 hsfa2 KO heat shock -0.53 >More info -0.20 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
173 high R/FR SA 0.53 >More info 0.20 >More info high R/FR high R/FR (control) SA spray Original data GEO bulk
174 aux1 mutant roots air -0.58 >More info -0.15 >More info roots IAA Original data GEO bulk
175 stele auxin 0.71 >More info 0.02 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
176 Col BTH 0.06 >More info 0.67 >More info Col rosettes Original data GEO bulk
177 AgNO3 3 h 0.19 >More info 0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
178 anac017-2 AntimycinA 3h -0.09 >More info -0.63 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
179 Laer pretreat JA Flg22 1h 0.55 >More info 0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
180 FOX line K16331 0.58 >More info 0.13 >More info empty vector control (T3) FOX lines Original data GEO bulk
181 Col-0 DEX Shade 0.60 >More info 0.11 >More info Col-0 DEX WL seedlings Original data
182 cov1 cov2 stem Top -0.51 >More info -0.20 >More info WT stem Top stem Top Original data GEO bulk
183 Brassinolide 1 h (det2) 0.18 >More info 0.53 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
184 CLO 4mM 0.21 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
185 oligomycin 4 h 0.20 >More info 0.51 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
186 col-5 hrpA 2h 0.02 >More info 0.69 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
187 Red/FR Light 4 h 0.54 >More info 0.16 >More info FarRed Light 4 h Original data Light treatments
188 Brz220 3 h -0.54 >More info -0.16 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
189 WT zebularine 0.56 >More info 0.14 >More info WT mock shoot apical meristem Original data
190 Cold Stress 24 h (shoot) 0.53 >More info 0.17 >More info Stress mock 24 h (shoot) Original data Stress treatments
191 WT-Dry 0.15 >More info 0.55 >More info WT-CK dehydration treatment 1h Original data
192 35S:RPS4 eds1-2 2h -0.16 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
193 ABA 24h 0.50 >More info 0.20 >More info EtOH 24h 24hr Original data GEO bulk
194 ein2-1 9 hpi A. brassicicola 0.20 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
195 roots IAA 0.56 >More info 0.13 >More info roots mock Original data GEO bulk
196 NAA -AA 0.60 >More info 0.09 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
197 Total RNA 35S:HF-RPL18 cold -0.50 >More info -0.19 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
198 col-5 DC3000-avrRpm 4h 0.10 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
199 Total RNA csp1 cold 0.56 >More info 0.12 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
200 35S:LOB-GR mock -0.52 >More info -0.16 >More info Col mock mock seedling Original data GEO bulk
201 35S::ERF104 Flg22 4h 0.04 >More info 0.64 >More info 35S::ERF104 H2O 4h Original data GEO bulk
202 amiR-tor induced 6d 0.16 >More info 0.52 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
203 ALC Toc1 light-dark Mock -0.62 >More info -0.05 >More info Col light-dark Mock no ethanol Original data GEO bulk
204 NAA 6h 0.62 >More info 0.05 >More info before treatment NAA root Original data GEO bulk
205 Callus 0.13 >More info 0.54 >More info Control for tissue data callus Original data GEO bulk
206 miR 0h 0.56 >More info 0.10 >More info Col 0h Leaf Original data GEO bulk
207 IAA19mII over-expressor mock -0.68 >More info 0.02 >More info empty vector mock Original data GEO bulk
208 piffq 3d WL -0.51 >More info -0.15 >More info WT 3d WL whole seedling Original data GEO bulk
209 WT 2-4h Xanthomonas 0.01 >More info 0.65 >More info WT T0 Original data GEO bulk
210 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.60 >More info 0.04 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
211 etr1 1% sucrose 12-day-old 0.51 >More info 0.13 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
212 t-zeatin 1 h 0.63 >More info 0.01 >More info Mock 1 h Original data Basic hormone treatment of seedlings
213 GR::bZIP1 +CHX +N +DEX -0.51 >More info -0.13 >More info GR::bZIP1 empty vector control +CHX +N +DEX 1 µM DEX in Ethanol Original data
214 Col-0 low oxygen 0.09 >More info 0.55 >More info Col-0 control low oxygen root Original data GEO bulk
215 gpa1-4/agb1-2 ozone 2d -0.09 >More info -0.55 >More info Col ozone 2d ozone Original data GEO bulk
216 ani1 T0.5 -0.03 >More info -0.61 >More info WT T0.5 root tissue Original data GEO bulk
217 nNOS-drought -0.71 >More info 0.07 >More info WT-drought leaf Original data
218 shoot control pCER5 0.56 >More info 0.07 >More info shoot control total Original data GEO bulk
219 Mutant iaa17-6 (IAA) 0.67 >More info -0.04 >More info Col (IAA) Original data GEO bulk
220 low CO2 + light 0.13 >More info 0.50 >More info normal CO2 + light Original data GEO bulk
221 4C 24h(SOIL) 0.50 >More info 0.12 >More info 4C 0h(SOIL) Original data GEO bulk
222 IAA 4h 0.54 >More info 0.07 >More info control 4h root Original data GEO bulk
223 pif4pif5 high R/FR -0.51 >More info -0.10 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
224 2hr transitory KNO3 PrR cell 0.53 >More info 0.08 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
225 ANAC102 knock-out low oxygen -0.53 >More info -0.07 >More info Col-0 low oxygen Original data GEO bulk
226 PRR5-VP 18h light on -0.56 >More info -0.04 >More info WT 18h light on whole plant Original data GEO bulk
227 WT Atum 2h 0.06 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
228 downy mildew cotyledons late stage 0.06 >More info 0.54 >More info mock inoculated Cotyledons Original data GEO bulk
229 tga1 tga4 2h KNO3 -0.04 >More info -0.56 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
230 MIL4 ox 0.74 >More info -0.14 >More info Col Original data GEO bulk
231 OxPHR1 -Pi-DEX-CHX -0.53 >More info -0.06 >More info phr1 -Pi-DEX-CHX Original data GEO bulk
232 E.coli TUV86 2 fliC 7h -0.05 >More info 0.64 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
233 Nicotinamide-85hr 0.00 >More info 0.58 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
234 1h +Pi -0.07 >More info -0.50 >More info 1h -Pi root Original data GEO bulk
235 edm2-2 untreated 0.62 >More info -0.06 >More info Col-0 untreated seedlings Original data GEO bulk
236 ATR1 OE 0.50 >More info 0.06 >More info WT for ATR1/MYB51 Original data GEO bulk
237 gpa1-4/agb1-2 clean-air 2d -0.54 >More info -0.02 >More info Col clean-air 2d clean-air Original data GEO bulk
238 G3P -0.50 >More info -0.06 >More info Mock distal leaves Original data GEO bulk
239 mpk6-ko Flg22 4h -0.05 >More info 0.61 >More info mpk6-ko H2O 4h Original data GEO bulk
240 CCA14 dark early 0.54 >More info 0.01 >More info Col dark early Original data GEO bulk
241 hy5 low light 0.53 >More info 0.02 >More info Col-O low light Original data GEO bulk
242 Mutant hy5 0.53 >More info 0.02 >More info Col-0 Original data GEO bulk
243 Nicotinamide-53hr -0.01 >More info 0.56 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
244 ice1 control -0.67 >More info 0.13 >More info WT control Original data GEO bulk
245 ein2-PsmES4326-24hpi 0.56 >More info -0.02 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
246 Laer pretreat GA+JA Flg22 2h 0.54 >More info 0.00 >More info Laer pretreat water control leaf discs Original data GEO bulk
247 low water potential -0.50 >More info -0.04 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
248 siliques AtHb1 control 0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
249 WT 30μM arsenate 8 hours. 0.02 >More info 0.52 >More info WT control (not supplemented). Original data
250 xyl-grown cell culture- 1h 1mM Suc 0.13 >More info -0.67 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
251 Mutant arf2-6 (IAA) 0.77 >More info -0.24 >More info Col (IAA) Original data GEO bulk
252 whole roots -Fe -0.55 >More info 0.02 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
253 IAA19mII over-expressor IAA Treated -0.59 >More info 0.07 >More info empty vector IAA Treated Original data GEO bulk
254 hai1-2 -0.55 >More info 0.03 >More info control control whole seedlings Original data GEO bulk
255 WT light 0.56 >More info -0.04 >More info WT dark Original data GEO bulk
256 gul2-1 mutant -0.51 >More info -0.01 >More info WT 7 day-old whole seedlings Original data
257 FOX line K19624 -0.51 >More info -0.01 >More info empty vector control (T3) FOX lines Original data GEO bulk
258 IRP1-OE-Ctrl--shoot -0.56 >More info 0.04 >More info COL-0-Ctrl--shoot shoot Original data
259 Red/FR Light45min -0.07 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
260 bri1-116 -0.21 >More info 0.73 >More info Col seedling Original data GEO bulk
261 B5 +AA -0.02 >More info -0.50 >More info B5 -AA B5 media and treated with AA Original data
262 ice1 3H Cold -0.67 >More info 0.16 >More info WT 3H Cold Original data GEO bulk
263 det2 light-dark 0.51 >More info -0.00 >More info det2 light light-dark Original data GEO bulk
264 safener treated -0.69 >More info 0.18 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
265 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
266 hrcC -0.07 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
267 Cor hrpS 10h -0.18 >More info 0.69 >More info Mock 10h Cor hrpS Original data GEO bulk
268 desiccated mature pollen grains 0.01 >More info -0.52 >More info hydrated pollen grains Original data GEO bulk
269 gun1gun5 far-red pretreated 0.16 >More info -0.66 >More info WT far-red pretreated Original data GEO bulk
270 Leafminer damaged seedlings -0.07 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
271 anac017-1 water 3h 0.50 >More info -0.01 >More info WT water 3h 3h_water Original data GEO bulk
272 mutant-line348 0.51 >More info -0.02 >More info WT-control whole plant Original data GEO bulk
273 Cotyledons -0.01 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
274 erf104-ko Flg22 4h -0.03 >More info 0.52 >More info erf104-ko H2O 4h Original data GEO bulk
275 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 -0.01 >More info 0.50 >More info Control for tissue data Original data GEO bulk
276 Nicotinamide-69hr -0.05 >More info 0.53 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
277 dde2-2 9 hpi A. brassicicola -0.08 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
278 35S::ERF104 H2O 4h -0.57 >More info 0.10 >More info Col-0 H2O 4h Original data GEO bulk
279 IPT8 mutant tZ 12h 0.62 >More info -0.15 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
280 S82-2 0.56 >More info -0.10 >More info wt Original data GEO bulk
281 cortex -0.09 >More info 0.55 >More info Control for tissue data cortex Original data GEO bulk
282 Mutant gh3.5-1D (AvrRpt2) -0.54 >More info 0.08 >More info Col-0 (AvrRpt2) Original data GEO bulk
283 Hypocotyl -0.04 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
284 E.coli 0157 H7 7h -0.14 >More info 0.60 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
285 Al treated -0.54 >More info 0.09 >More info control Original data GEO bulk
286 tt4 -0.53 >More info 0.08 >More info WT aerial region Original data GEO bulk
287 JMJ24 knockout -0.57 >More info 0.12 >More info WT Original data GEO bulk
288 Mutant iaa5_6_19 -0.60 >More info 0.15 >More info Col Original data GEO bulk
289 Col ozone 3h -0.21 >More info 0.65 >More info Col clean-air 3h ozone Original data GEO bulk
290 anac017-1 H2O2 3h 0.12 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
291 abi4-102 -lincomycin 0.51 >More info -0.07 >More info Col-0 -lincomycin Original data GEO bulk
292 aba1 hypocotyl -0.07 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
293 Protoplast Induced -0.07 >More info 0.50 >More info Uninduced Original data GEO bulk
294 mature endodermis glcal -0.11 >More info 0.53 >More info Control for tissue data endodermis Original data GEO bulk
295 IMI 4mM -0.09 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
296 Col-Luc WT 3h antimycin A -0.17 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
297 Wounding Stress3 h (shoot) -0.11 >More info 0.52 >More info Stress mock 3 h (shoot) Original data Stress treatments
298 ataf1-1 mutant Col-0 Un-inoculated 0.09 >More info -0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
299 GV3101 6dpi -0.57 >More info 0.16 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
300 long 14-degree- -0.16 >More info 0.56 >More info control long Original data GEO bulk
301 Col-0-avrB-6h -0.12 >More info 0.51 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
302 4C 0h -0.50 >More info 0.12 >More info 22C 0h Original data GEO bulk
303 Mutant cry1 0.50 >More info -0.12 >More info Col-0 Original data GEO bulk
304 TaFLS overexpression line (OE2) 0.53 >More info -0.15 >More info Col-0 Rosette leaves Original data
305 Col-0 SA -0.54 >More info 0.16 >More info Col-0 Original data GEO bulk
306 cry1 low light 0.50 >More info -0.12 >More info Col-O low light Original data GEO bulk
307 Laer pretreat JA Flg22 2h 0.53 >More info -0.15 >More info Laer pretreat water control leaf discs Original data GEO bulk
308 bHLH122 ox 0.14 >More info -0.52 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
309 FLIGHT TAGESB plate6 ROOTS -0.15 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
310 coi1-16 ein2 sid2 ozone -0.57 >More info 0.19 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
311 Stem+10 mg/g NPA 0.50 >More info -0.13 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
312 Glyphosate EC50 -0.62 >More info 0.25 >More info Carrier (Glyphosate) Original data GEO bulk
313 Col-0 Flg22 4h -0.27 >More info 0.64 >More info Col-0 H2O 4h Original data GEO bulk
314 col-5 hrpA 12h -0.28 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
315 Differentiation 48h 0.55 >More info -0.19 >More info Differentiation 0h leaves Original data
316 M6PR transgenic leaf 0mM NaCl -0.19 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
317 WT Shoot Hypoxia -0.57 >More info 0.21 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
318 TA induced -0.14 >More info 0.50 >More info Methanol TA Suspension cells Original data GEO bulk
319 Differentiation 36h 0.51 >More info -0.16 >More info Differentiation 0h leaves Original data
320 shoot control p35S 0.50 >More info -0.15 >More info shoot control total Original data GEO bulk
321 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.54 >More info 0.20 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
322 shoot hypoxia pRBCS 0.50 >More info -0.16 >More info shoot hypoxia total Original data GEO bulk
323 Cs shoot 0.17 >More info -0.51 >More info control shoot Original data GEO bulk
324 Col-0 9 hpi A. brassicicola -0.24 >More info 0.58 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
325 Col-0 +ABA LF -0.54 >More info 0.21 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
326 Col-0 ozone -0.55 >More info 0.22 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
327 Mature roots -0.21 >More info 0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
328 Sepals stage15 -0.19 >More info 0.52 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
329 BAM7-Cat Ox untreated -0.50 >More info 0.17 >More info WT untreated none shoot Original data
330 WT seedlings NaCl 0.61 >More info -0.28 >More info WT seedlings control Seedlings Original data GEO bulk
331 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.55 >More info 0.23 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
332 treated group -0.52 >More info 0.20 >More info Control group Original data
333 Col-0 DCA 48h -0.18 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
334 M6PR transgenic 0mM NaCl -0.18 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
335 seed germinating in countinuous light 24h SL -0.37 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
336 hrpA 7h -0.24 >More info 0.54 >More info Mock 7h hrpA Original data GEO bulk
337 P.syringae AvrRpt2 4 h (leaf) -0.33 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
338 gpa1 -ABA GC 0.30 >More info -0.60 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
339 WT 90-105 min Xanthomonas -0.28 >More info 0.58 >More info WT T0 Original data GEO bulk
340 Mutant iaa17-6 -0.66 >More info 0.37 >More info Col Original data GEO bulk
341 gai MeJA 1h 0.55 >More info -0.26 >More info Laer MeJA 1h leaf discs Original data GEO bulk
342 Te ozone -0.51 >More info 0.22 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
343 del1-1 mutant 5d uninfected -0.32 >More info 0.61 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
344 ice1 6H Cold -0.57 >More info 0.28 >More info WT 6H Cold Original data GEO bulk
345 phloem sieve cells and companion cells -0.22 >More info 0.50 >More info Control for tissue data phloem Original data GEO bulk
346 cat2-2; 8h switch to ambient CO2 concentrations; -0.25 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
347 plant (tga2-5-6) 4h phytoprostane A1 -0.32 >More info 0.60 >More info plant (tga2-5-6) 4h control Original data GEO bulk
348 JA 24h -0.57 >More info 0.30 >More info EtOH 24h 24hr Original data GEO bulk
349 1 h Light Total RNA 0.24 >More info -0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
350 GO5; 8h switch to ambient CO2 concentrations; -0.25 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
351 agb1 gpa1 +ABA LF 0.55 >More info -0.30 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
352 GA -0.26 >More info 0.50 >More info none GA Rosette Original data GEO bulk
353 Col-0 V. longisporum-inoculated 48 hpi -0.58 >More info 0.34 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
354 Selenate (root) -0.29 >More info 0.52 >More info Ws (root) Original data GEO bulk
355 Root Selenate -0.29 >More info 0.52 >More info Root control 40 micromolar selenate Root Original data GEO bulk
356 4tga safener 0.51 >More info -0.28 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
357 wnk8-2 untreated 0.28 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
358 TNT-seedlings -0.40 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
359 cell culture 4 h phytoprostane A1 -0.56 >More info 0.34 >More info cell culture 4 h control Original data GEO bulk
360 ARR22-ox -0.70 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
361 CT101 ozone -0.50 >More info 0.29 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
362 vte2-1 1d vernalization -0.33 >More info 0.54 >More info WT 1d vernalization Original data GEO bulk
363 gpa1 +ABA GC 0.32 >More info -0.51 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
364 Laer Pst DC3000 12hpi 0.52 >More info -0.34 >More info Laer Control leaf discs Original data GEO bulk
365 ataf1-1 mutant Col-0 Bgh inoculated -0.33 >More info 0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
366 Elevated CO2 leaf primordia -0.40 >More info 0.57 >More info Ambient CO2 leaf primordia leaf primordia Original data
367 CCA1-ox 6am non-polysomal -0.35 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
368 cdpk6-yfp -0.53 >More info 0.40 >More info Kan seedlings Original data GEO bulk
369 ARR22-ox (t-zeatin 3 h) -0.50 >More info 0.37 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
370 inhibitor A Treated -0.47 >More info 0.57 >More info Negative Control Original data GEO bulk
371 inhibitor B Treated -0.46 >More info 0.55 >More info Negative Control Original data GEO bulk
372 abi1 hypocotyl -0.48 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
373 Col0-PsmES4326-24hpi -0.57 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
374 IAA7mII over-expressor IAA Treated -0.65 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk