4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on nia1nia2
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List of experiments correlated with "nia1nia2"  Help Download transcriptome of top 30
Score Experiment Correlation from
nia1nia2		 Correlation to
nia1nia2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 nia1nia2 1.00 >More info 1.00 >More info Col-0 whole seedlings Original data GEO bulk
2 nia1nia2noa1-2 0.89 >More info 0.90 >More info Col-0 whole seedlings Original data GEO bulk
3 Sulfometuron EC50 0.74 >More info 0.76 >More info Carrier Original data GEO bulk
4 Shoot -Cs 0.64 >More info 0.81 >More info Control-shoot Original data GEO bulk
5 B.cinerea 18 h infection 0.69 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
6 HopZ1a treated 0.71 >More info 0.72 >More info col Original data GEO bulk
7 Botrytis cinerea 18h 0.69 >More info 0.74 >More info control 18h Original data GEO bulk
8 bZIP1ko mutant N+Light- 0.56 >More info 0.85 >More info WT-sib N+Light- whole plant Original data GEO bulk
9 Botrytis cinerea 48h 0.70 >More info 0.70 >More info control 48h Original data GEO bulk
10 Imidazolinone EC50 0.63 >More info 0.76 >More info Carrier (Imidazolinone) Original data GEO bulk
11 PAHs stress 0.71 >More info 0.68 >More info exp control phenanthrene whole plants Original data GEO bulk
12 ice1 control 0.70 >More info 0.69 >More info WT control Original data GEO bulk
13 Cor 10h 0.67 >More info 0.71 >More info Mock 10h Cor Original data GEO bulk
14 Osmotic Stress 24 h (shoot) 0.65 >More info 0.72 >More info Stress mock 24 h (shoot) Original data Stress treatments
15 HopZ1a treated ulp1c ulp1d 0.68 >More info 0.69 >More info col Original data GEO bulk
16 Shoot -K 0.72 >More info 0.65 >More info Control-shoot Original data GEO bulk
17 K starvation (shoot) 0.72 >More info 0.65 >More info Ws (shoot) Original data GEO bulk
18 ice1 6H Cold 0.65 >More info 0.71 >More info WT 6H Cold Original data GEO bulk
19 pnp1-1 3h +P 0.66 >More info 0.68 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
20 shoots bhlh100/101 0uM Fe 0.74 >More info 0.59 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
21 seedlings-week-old RECA1-overexpressing
transgenic		 0.63 >More info 0.69 >More info seedlings-week-old Col-0 seedlings Original data
22 Pto inoculated 0.68 >More info 0.63 >More info col Original data GEO bulk
23 Differentiation 12h 0.63 >More info 0.68 >More info Differentiation 0h leaves Original data
24 SA 4mM 0.60 >More info 0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
25 CLO 4mM 0.60 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
26 Salt Stress 24 h (shoot) 0.58 >More info 0.71 >More info Stress mock 24 h (shoot) Original data Stress treatments
27 Primisulfuron EC50 0.57 >More info 0.72 >More info Carrier (primisulfuron) Original data GEO bulk
28 Col-0 under 4 days salt 0.64 >More info 0.65 >More info Col-0 under control 4 days salt treatment rosette Original data
29 Col ozone 2d 0.62 >More info 0.67 >More info Col clean-air 2d ozone Original data GEO bulk
30 Triazolopyrimidine EC50 0.57 >More info 0.72 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
31 Fenclorim 4hr 0.64 >More info 0.64 >More info Acetone 4hr root Original data GEO bulk
32 Glyphosate EC50 0.56 >More info 0.72 >More info Carrier (Glyphosate) Original data GEO bulk
33 csn5 (csn5a-2 csn5b) light 0.66 >More info 0.62 >More info WT light Original data GEO bulk
34 IMI 4mM 0.66 >More info 0.62 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
35 Leaf GLU1-KO 0.60 >More info 0.67 >More info Leaf Col(0) rosette leaves Original data GEO bulk
36 AgNO3 3 h 0.60 >More info 0.67 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
37 Wounding Stress3 h (shoot) 0.59 >More info 0.68 >More info Stress mock 3 h (shoot) Original data Stress treatments
38 Col-0-avrB-6h 0.61 >More info 0.66 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
39 flu over-tAPX 0.60 >More info 0.67 >More info WT Col Original data GEO bulk
40 Fenclorim 24hr 0.66 >More info 0.60 >More info Acetone 24hr root Original data GEO bulk
41 SLWF infested 0.62 >More info 0.64 >More info SLWF uninfested rosette tissue Original data GEO bulk
42 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.57 >More info 0.69 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
43 8hr-pH4.5 0.60 >More info 0.65 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
44 pho1 0.59 >More info 0.66 >More info Col2WT Original data GEO bulk
45 TNT-seedlings 0.62 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
46 Col0-PsmES4326-24hpi 0.64 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
47 R. solani AG8 0.65 >More info 0.60 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
48 Seedling KUA1-IOX est 0.55 >More info 0.69 >More info Seedling KUA1-IOX mock Original data
49 ataf1-1 mutant Col-0 Bgh inoculated 0.60 >More info 0.64 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
50 GO5; 8h switch to ambient CO2 concentrations; 0.49 >More info 0.75 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
51 flu 0.58 >More info 0.65 >More info WT Col Original data GEO bulk
52 CMP 24hr 0.62 >More info 0.61 >More info Acetone 24hr root Original data GEO bulk
53 Col-Luc WT 3h antimycin A 0.61 >More info 0.62 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
54 WT in -N 0.58 >More info 0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
55 LTN008-2 aza-dc 0.63 >More info 0.59 >More info LTN012-2 Mock Original data
56 ABA DFPM 0.60 >More info 0.62 >More info control Original data GEO bulk
57 col-5 DC3000 12h 0.58 >More info 0.64 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
58 del1-1 mutant 5d uninfected 0.56 >More info 0.65 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
59 csn3-1 light 0.60 >More info 0.61 >More info WT light Original data GEO bulk
60 anac017-2 AntimycinA 3h -0.60 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
61 rao2 H2O2 3h -0.53 >More info -0.68 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
62 WT Col-0 Bgh inoculated 0.57 >More info 0.64 >More info WT Col-0 Un-inoculated Original data GEO bulk
63 6h +Pi -0.56 >More info -0.65 >More info 6h -Pi root Original data GEO bulk
64 AvrRpt2 Col-0 6hpi 0.65 >More info 0.55 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
65 ceh1 mutant 0.55 >More info 0.65 >More info Parent line Original data
66 lht1 untreated 0.55 >More info 0.65 >More info WT untreated untreated leaf Original data GEO bulk
67 DC3000 7h 0.57 >More info 0.63 >More info Mock 7h DC3000 Original data GEO bulk
68 Whole root - low pH 24H 0.51 >More info 0.69 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
69 WT-SA 0.61 >More info 0.59 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
70 Col-0 drought 0.59 >More info 0.61 >More info Col-0 control Original data GEO bulk
71 bak1-3 +Pep2 10h 0.59 >More info 0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
72 Cor hrpS 10h 0.61 >More info 0.58 >More info Mock 10h Cor hrpS Original data GEO bulk
73 DFPM 0.61 >More info 0.58 >More info control Original data GEO bulk
74 penta Alternaria 3dpi 0.66 >More info 0.53 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
75 35S:RPS4 eds1-2 8h -0.58 >More info -0.61 >More info 35S:RPS4 8h leaves Original data
76 sta1 0.65 >More info 0.53 >More info WT Original data GEO bulk
77 ice1 3H Cold 0.63 >More info 0.55 >More info WT 3H Cold Original data GEO bulk
78 CMV-WT 0.53 >More info 0.65 >More info Mock-At Aerial tissues Original data GEO bulk
79 Nicotinamide-53hr 0.52 >More info 0.66 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
80 Col-0 9 hpi A. brassicicola 0.63 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
81 DC3000 24h 0.58 >More info 0.60 >More info Mock 24h DC3000 Original data GEO bulk
82 long 17-degree- 0.48 >More info 0.70 >More info control long Original data GEO bulk
83 efr-1 +elf18 10h -0.56 >More info -0.61 >More info WT +elf18 10h elf18 Original data GEO bulk
84 col-5 hrpA 12h 0.57 >More info 0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
85 sicy-192 gun1-101 cotyledons 0.55 >More info 0.62 >More info WT cotyledons cotyledons Original data
86 cpr5npr1 0.47 >More info 0.70 >More info WT(COL) Original data GEO bulk
87 Elevated CO2 AMPLE N NIGHT 0.47 >More info 0.70 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
88 Nicotinamide-81hr 0.53 >More info 0.63 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
89 hira-root -0.51 >More info -0.65 >More info WT-root root Original data
90 CMP 4hr 0.56 >More info 0.60 >More info Acetone 4hr root Original data GEO bulk
91 des1 water 0.54 >More info 0.62 >More info WT water water leaf Original data GEO bulk
92 short 12-degree- 0.48 >More info 0.68 >More info control short Original data GEO bulk
93 Elevated CO2 AMPLE N DAY 0.48 >More info 0.68 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
94 upf1 0.57 >More info 0.59 >More info WT whole plant Original data GEO bulk
95 lht1 PstDC3000 48h 0.57 >More info 0.59 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
96 Mutant cry1 (High Light) -0.53 >More info -0.62 >More info Col-0 (High Light) Original data GEO bulk
97 R. solani AG2-1 0.56 >More info 0.59 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
98 aox1a(line) MLD stressed 0.50 >More info 0.65 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
99 WT powdery mildew 0.57 >More info 0.58 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
100 WT Shoot-Pi 0.59 >More info 0.56 >More info WT Shoot+Pi shoots Original data GEO bulk
101 upf3 0.53 >More info 0.62 >More info WT whole plant Original data GEO bulk
102 cry1 high light -0.53 >More info -0.62 >More info Col-O high light Original data GEO bulk
103 Whole root - low pH 6H 0.48 >More info 0.67 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
104 35S::PI ap3-3 35S::AP-GR +DEX 0.41 >More info 0.74 >More info 0hr DEX Original data GEO bulk
105 irradiated leaf (cmt 1d) 0.51 >More info 0.63 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
106 cat2-2; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
107 gh3.5-1D 48 hpi 0.58 >More info 0.56 >More info Col-0 uninoculated Original data GEO bulk
108 WT 3h -P 0.56 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
109 PBZ 0.47 >More info 0.67 >More info none PBZ Rosette Original data GEO bulk
110 WT 1wk -P 0.57 >More info 0.57 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
111 Whole root - S 3H 0.45 >More info 0.69 >More info Whole root - S 0H Original data GEO bulk
112 Selenate (shoot) 0.50 >More info 0.63 >More info Ws (shoot) Original data GEO bulk
113 cdkf:1-2 0.54 >More info 0.59 >More info wt seedling young seedlings Original data GEO bulk
114 35S:RPS4 eds1-2 24h -0.56 >More info -0.57 >More info 35S:RPS4 24h leaves Original data
115 Shoot Selenate 0.50 >More info 0.63 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
116 clf-28 swn-7 0.48 >More info 0.65 >More info Col whole plant Original data GEO bulk
117 Whole root - low pH 3H 0.42 >More info 0.71 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
118 ice1 24H Cold 0.56 >More info 0.56 >More info WT 24H Cold Original data GEO bulk
119 abh1 -ABA 0.55 >More info 0.57 >More info Col-0 -ABA Original data GEO bulk
120 amiR-tor induced 6d 0.54 >More info 0.58 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
121 Col whole leaf 5dpi 0.51 >More info 0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
122 Cocultivation 8 hrs root 0.54 >More info 0.58 >More info Mock cocultivation 8 hrs root Root Original data
123 short 14-degree- 0.46 >More info 0.66 >More info control short Original data GEO bulk
124 ein2-1 9 hpi A. brassicicola 0.60 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
125 35:SUB1A 0.51 >More info 0.60 >More info WT whole seedling Original data GEO bulk
126 rosette Dark Wounded 0.48 >More info 0.63 >More info rosette Dark Control Original data GEO bulk
127 WT+H2O2 0.49 >More info 0.62 >More info WT H2O2 Original data GEO bulk
128 pmr5 pmr6 0.53 >More info 0.57 >More info Col-0 Original data GEO bulk
129 eds16 whole leaf 5dpi -0.52 >More info -0.58 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
130 smg5-2 0.54 >More info 0.56 >More info WT whole plant Original data GEO bulk
131 Col whole leaf 7dpi 0.52 >More info 0.58 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
132 csn4-1 dark 0.52 >More info 0.58 >More info WT light Original data GEO bulk
133 low water potential 0.49 >More info 0.61 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
134 Leafminer damaged seedlings 0.53 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
135 ASL9-ox -0.56 >More info -0.53 >More info WT aerial parts of seedlings Original data GEO bulk
136 Mutant gh3.5-1D (AvrRpt2) 0.50 >More info 0.59 >More info Col-0 (AvrRpt2) Original data GEO bulk
137 long 14-degree- 0.52 >More info 0.57 >More info control long Original data GEO bulk
138 Phytoprostane A1 4 h 0.51 >More info 0.57 >More info Col-0 Original data GEO bulk
139 msh1 albino 0.57 >More info 0.51 >More info WT aerial part Original data GEO bulk
140 albino Ds13-2198-1 -0.64 >More info -0.44 >More info control Original data GEO bulk
141 SA 0.54 >More info 0.54 >More info WT mock Whole seedling Original data GEO bulk
142 ein5-1 ski2-3 0.53 >More info 0.55 >More info Col-0 aerial tissue Original data
143 root Dosed gold 0.55 >More info 0.53 >More info root No gold .125 mM gold 24 h roots Original data
144 BLM+INA 0.54 >More info 0.54 >More info CK BLM and INA seedling Original data
145 0.125 mM gold 24 h 0.55 >More info 0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
146 5-Triiodobenzoic acid3 h 0.49 >More info 0.59 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
147 RPL18 TuMV inoculated total RNA 0.44 >More info 0.64 >More info mock inoculated total RNA PO Original data GEO bulk
148 Elevated CO2 fully expanded leaf 0.55 >More info 0.52 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
149 wrky33 Bc inoculation 14h 0.62 >More info 0.45 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
150 rpoTmp(line) MLD stressed 0.52 >More info 0.55 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
151 WT resupplied Pi 4h 0.54 >More info 0.53 >More info WT complete seedlings Original data
152 UV 0.53 >More info 0.54 >More info WT aerial region Original data GEO bulk
153 long 12-degree- 0.44 >More info 0.63 >More info control long Original data GEO bulk
154 C2 leaf-drought 0.46 >More info 0.61 >More info C2 leaf-well watered Original data GEO bulk
155 cpr5 0.45 >More info 0.62 >More info WT(COL) Original data GEO bulk
156 ws 24h4c q8ws 0.59 >More info 0.48 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
157 essp4/sdg8-5 mutant 0.58 >More info 0.49 >More info wild type leaf Original data GEO bulk
158 8h-DC3000 avrRpm1 0.57 >More info 0.50 >More info 8h-DC3000 leaves Original data GEO bulk
159 Laer treat paclobutrazol (PAC) 0.48 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
160 smg7b-1 0.48 >More info 0.59 >More info WT whole plant Original data GEO bulk
161 pmr5 0.48 >More info 0.59 >More info Col-0 Original data GEO bulk
162 npr1-1 SA -0.53 >More info -0.53 >More info Col-0 SA complete seedling Original data
163 BLM 0.51 >More info 0.55 >More info CK BLM seedling Original data
164 Cor 24h 0.53 >More info 0.53 >More info Mock 24h Cor Original data GEO bulk
165 Whole root - low pH 12H 0.50 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
166 cpr5npr1svi1 0.44 >More info 0.62 >More info WT(COL) Original data GEO bulk
167 sni1 0.43 >More info 0.63 >More info WT Original data GEO bulk
168 S15-118 0.44 >More info 0.62 >More info wt Original data GEO bulk
169 Phaseolicola 2 h (leaf) 0.53 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
170 WT 2-4h Xanthomonas 0.50 >More info 0.55 >More info WT T0 Original data GEO bulk
171 GST NPP1 4 h (leaf) 0.54 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
172 seedling -S Exp 0.51 >More info 0.54 >More info seedling FN Exp seedling Original data
173 Col BTH 0.38 >More info 0.67 >More info Col rosettes Original data GEO bulk
174 col 24h4c set4 0.48 >More info 0.57 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
175 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.56 >More info 0.48 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
176 hrcC 0.52 >More info 0.52 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
177 pvip1 pvip2 0.49 >More info 0.55 >More info Col-0 whole rosettes Original data GEO bulk
178 amiR-tor induced 3d 0.44 >More info 0.60 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
179 S58-2 0.49 >More info 0.55 >More info wt Original data GEO bulk
180 Pst-DC3000(avrRpm1)-4hpi 0.53 >More info 0.50 >More info Pst-DC3000-4hpi Original data GEO bulk
181 DC3000 2 h (leaf) 0.50 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
182 Col-0 flu HL 3h 0.53 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
183 cop1 Seedling BL+ABA 0.50 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
184 gun1gun5 far-red pretreated -0.54 >More info -0.49 >More info WT far-red pretreated Original data GEO bulk
185 sid2 -0.47 >More info -0.56 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
186 Col-0 +ABA LF 0.49 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
187 GA 0.38 >More info 0.65 >More info none GA Rosette Original data GEO bulk
188 WT 24h cold 0.44 >More info 0.59 >More info WT warm 24h cold entire aerial part Original data GEO bulk
189 Col leaves 48h LT 0.47 >More info 0.56 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
190 toc1-1-65hr 0.51 >More info 0.51 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
191 downy mildew cotyledons late stage 0.53 >More info 0.49 >More info mock inoculated Cotyledons Original data GEO bulk
192 Te ozone 0.56 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
193 Nicotinamide-57hr 0.52 >More info 0.50 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
194 long 10-degree- 0.42 >More info 0.60 >More info control long Original data GEO bulk
195 rosettes WT drought 0.43 >More info 0.59 >More info rosettes WT watered Original data GEO bulk
196 Heat no recovery 0.44 >More info 0.58 >More info Mock no recovery seedling Original data GEO bulk
197 apum23 0.46 >More info 0.56 >More info WT (Col-3) aerial parts Original data GEO bulk
198 ABA SA 24h 0.32 >More info 0.70 >More info EtOH 24h 24hr Original data GEO bulk
199 cpr5 0.48 >More info 0.54 >More info WT seedling Original data GEO bulk
200 vte2-1 3d vernalization 0.47 >More info 0.55 >More info WT 3d vernalization Original data GEO bulk
201 Leafminer locally damaged thaliana seedlings 0.53 >More info 0.48 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
202 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.54 >More info 0.47 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
203 E.coli TUV86 2 fliC 7h 0.50 >More info 0.51 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
204 pnp1-1 3h -P 0.50 >More info 0.51 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
205 mkk1/mkk2 24h BTH rep 0.53 >More info 0.48 >More info Col-0 24h BTH rep Original data GEO bulk
206 ARR22-ox (t-zeatin 3 h) 0.57 >More info 0.44 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
207 short 10-degree- 0.48 >More info 0.53 >More info control short Original data GEO bulk
208 dor drought 0.41 >More info 0.60 >More info WT drought Original data GEO bulk
209 coi1-2 0.41 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
210 T6 leaf-drought 0.39 >More info 0.61 >More info T6 leaf-well watered Original data GEO bulk
211 sid2-1 cold -0.42 >More info -0.58 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
212 cpr5scv1 0.46 >More info 0.54 >More info WT(COL) Original data GEO bulk
213 Chemically 0.34 >More info 0.66 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
214 aox1a:rpoTmp untreated 0.37 >More info 0.63 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
215 pepr1-1 Pepr2-3 +Pep2 10h -0.52 >More info -0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
216 plant (tga2-5-6) 4h phytoprostane A1 0.52 >More info 0.47 >More info plant (tga2-5-6) 4h control Original data GEO bulk
217 Blue Light 4 h 0.40 >More info 0.59 >More info White Light 4 h Original data Light treatments
218 tmm1-inflorescence-tips 0.43 >More info 0.56 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
219 ulp1c ulp1d +Pto 0.45 >More info 0.54 >More info ulp1c ulp1d mock Original data GEO bulk
220 seedlings +5AC 0.46 >More info 0.53 >More info control seedlings 10-day old whole seedling Original data GEO bulk
221 myb3 myb3r4d 0.36 >More info 0.63 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
222 WT cold 0.40 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
223 A. thaliana-A. lyrata hybrid -0.39 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
224 WT Bc inoculation 14h 0.59 >More info 0.39 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
225 Flagellin 4 h (leaf) 0.51 >More info 0.47 >More info Mock 4 h (leaf) Original data Elicitor treatments
226 Chitosan 3h Treatment 0.52 >More info 0.46 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
227 PNO8 3 h 0.33 >More info 0.65 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
228 WT leaf-drought 0.42 >More info 0.56 >More info WT leaf-well watered Original data GEO bulk
229 rosettes myoox drought 0.39 >More info 0.59 >More info rosettes myoox watered Original data GEO bulk
230 Col in Pi deficiency medium 0.28 >More info 0.70 >More info Col in control medium root Original data GEO bulk
231 ABA SA 3h 0.41 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
232 anac017-1 H2O2 3h -0.48 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
233 WT AntimycinA 3h 0.45 >More info 0.53 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
234 whole roots 140 mM NaCl 1 hour 0.41 >More info 0.57 >More info whole roots standard Original data GEO bulk
235 eif3h polysome 0.55 >More info 0.42 >More info WT polysome Original data GEO bulk
236 UV Stress 24 h (shoot) 0.44 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
237 oas-a1.1 Cd 18h 0.44 >More info 0.53 >More info Cd 18h root Root Original data GEO bulk
238 pepr1-1 Pepr2-3 +Pep2 2h -0.46 >More info -0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
239 ABA control 0.31 >More info 0.66 >More info No ABA control Original data GEO bulk
240 rosettes drought 0.40 >More info 0.56 >More info rosettes watered Original data GEO bulk
241 toc1-1-77hr 0.50 >More info 0.46 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
242 Light 3day wt -0.41 >More info -0.55 >More info 0h wt Original data
243 Col-0 INA 48h 0.46 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
244 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
245 dicamba 0.45 >More info 0.51 >More info WT mock whole seedling Original data GEO bulk
246 35S:VND7-VP16-GR+CHX 0.41 >More info 0.55 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
247 col-5 DC3000-avrRpm 4h 0.45 >More info 0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
248 Root -Cs 0.36 >More info 0.60 >More info Control-root Original data GEO bulk
249 WT no Pi 0.46 >More info 0.50 >More info WT complete seedlings Original data
250 P.syringae AvrRpt2 4 h (leaf) 0.53 >More info 0.42 >More info Mock 4 h (leaf) Original data Elicitor treatments
251 ubc13A -Fe -0.53 >More info -0.42 >More info Col -Fe root Original data GEO bulk
252 GST 4 h (leaf) 0.41 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
253 WT flg22 2h 0.43 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
254 RPL18 TuMV inoculated polysomal RNA 0.41 >More info 0.54 >More info mock inoculated polysomal RNA PO Original data GEO bulk
255 Stem tissue 5 days NAA 0.43 >More info 0.52 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
256 ABA JA 3h 0.41 >More info 0.54 >More info EtOH 3h 3hr Original data GEO bulk
257 Whole root - S 12H 0.36 >More info 0.59 >More info Whole root - S 0H Original data GEO bulk
258 rcf1-1 cold 24h 0.36 >More info 0.59 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
259 gul2-1 mutant 0.42 >More info 0.53 >More info WT 7 day-old whole seedlings Original data
260 WT-Dry 0.33 >More info 0.62 >More info WT-CK dehydration treatment 1h Original data
261 sicy-192 cotyledons 0.37 >More info 0.58 >More info WT cotyledons cotyledons Original data
262 Mutant axr3-1 0.39 >More info 0.55 >More info Col Original data GEO bulk
263 col-5 hrpA 2h 0.40 >More info 0.54 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
264 T8 leaf-drought 0.37 >More info 0.57 >More info T8 leaf-well watered Original data GEO bulk
265 E.coli 0157 H7 7h 0.42 >More info 0.52 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
266 9 hr Hypoxia 1 hr recovery Total RNA 0.41 >More info 0.53 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
267 Col-0 ozone 0.54 >More info 0.39 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
268 vte2 leaves 48h LT 0.54 >More info 0.39 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
269 rosette Light Wounded 0.40 >More info 0.53 >More info rosette Light Control Original data GEO bulk
270 seedling 24h after Gamma WT 0.40 >More info 0.53 >More info seedling day 2 unirradiated WT 24h Original data
271 pnp1-1 1wk +P 0.51 >More info 0.42 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
272 coi1-16 ein2 sid2 ctrl -0.52 >More info -0.41 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
273 FOX line K16331 0.42 >More info 0.51 >More info empty vector control (T3) FOX lines Original data GEO bulk
274 35S:LOB-GR mock 0.42 >More info 0.51 >More info Col mock mock seedling Original data GEO bulk
275 root endodermis and quiescent center 40 mM NaCl 0.32 >More info 0.61 >More info root endodermis and quiescent center Original data GEO bulk
276 sid2-2 9 hpi A. brassicicola 0.52 >More info 0.40 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
277 GST-overexpression seedlings control 0.53 >More info 0.39 >More info WT seedlings control Seedlings Original data
278 Whole root - S 48H 0.39 >More info 0.53 >More info Whole root - S 0H Original data GEO bulk
279 bHLH122 ox -0.36 >More info -0.56 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
280 eif3h 0.51 >More info 0.41 >More info WT Original data GEO bulk
281 ANOXIA -0.35 >More info -0.57 >More info ANOXIA+SUCROSE Original data GEO bulk
282 ABA 24h 0.33 >More info 0.59 >More info EtOH 24h 24hr Original data GEO bulk
283 camta3-2 0.36 >More info 0.55 >More info WT Original data GEO bulk
284 dcl3-1 0.38 >More info 0.53 >More info Col-0 Original data GEO bulk
285 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
286 Mutant siz1-3 0.41 >More info 0.50 >More info Col-0 Original data GEO bulk
287 siz1-3 control 0.41 >More info 0.50 >More info Col-0 control Original data GEO bulk
288 CT101 ozone 0.53 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
289 35S-MIF1 light grown 0.33 >More info 0.57 >More info Light-grown WT control Original data GEO bulk
290 AtMYB30-ox 90-105 min Xanthomonas 0.31 >More info 0.59 >More info WT 90-105 min Xanthomonas Original data GEO bulk
291 rosettes atx drought 0.38 >More info 0.51 >More info rosettes atx watered Original data GEO bulk
292 Tsu-1 -Fe 24h 0.26 >More info 0.63 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
293 Tsu -Fe 24h Roots 0.26 >More info 0.63 >More info Tsu +Fe 24h Roots Original data GEO bulk
294 cell culture 4 h phytoprostane A1 0.35 >More info 0.53 >More info cell culture 4 h control Original data GEO bulk
295 ppi2 0.36 >More info 0.52 >More info WT whole plant Original data GEO bulk
296 root longitudinal zone-1 pH 4.6 0.36 >More info 0.52 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
297 Transgenic LEC2GR Seedling 1h Dex 0.38 >More info 0.50 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
298 plant (Col-0) 4h phytoprostane A1 0.34 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
299 whole roots 140 mM NaCl 4 hour 0.34 >More info 0.53 >More info whole roots standard Original data GEO bulk
300 NJ15 0.31 >More info 0.56 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
301 Selenate (root) 0.37 >More info 0.50 >More info Ws (root) Original data GEO bulk
302 toc1-1-57hr 0.36 >More info 0.51 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
303 Whole root - S 24H 0.36 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
304 Root Selenate 0.37 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
305 aba3-1 0.34 >More info 0.52 >More info wt Original data GEO bulk
306 Col-O high light 0.33 >More info 0.53 >More info Col-O bule light Original data GEO bulk
307 seedling 24h after Gamma atm-1 0.33 >More info 0.53 >More info seedling day 2 unirradiated atm-1 24h Original data
308 Ws-2 high light 0.26 >More info 0.60 >More info Ws-2 low light Original data GEO bulk
309 gpa1 -ABA LF 0.34 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
310 4C 24h(SOIL) 0.33 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
311 pab polysome 0.17 >More info 0.68 >More info WT polysome seedling shoot/aerial seedling Original data
312 seedling 3h after Gamma WT 0.32 >More info 0.53 >More info seedling day 1 unirradiated WT 3h Original data
313 hrpA fliC 7h 0.50 >More info 0.35 >More info Mock 7h hrpA fliC Original data GEO bulk
314 Col whole leaf 6hpi 0.35 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
315 MYB46-GR DEX 0.24 >More info 0.61 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
316 WT+sucrose 0.27 >More info 0.58 >More info WT+no sugars rosette leaves Original data GEO bulk
317 inhibitor B Treated 0.30 >More info 0.54 >More info Negative Control Original data GEO bulk
318 long 8-degree- 0.30 >More info 0.53 >More info control long Original data GEO bulk
319 rosette leaves fdh 0.33 >More info 0.50 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
320 camta1/2 warm -0.29 >More info -0.54 >More info WT 24h cold entire aerial part Original data GEO bulk
321 root longitudinal zone-4 NaCl 0.30 >More info 0.53 >More info root longitudinal zone-4 Original data GEO bulk
322 agb1 -ABA LF 0.30 >More info 0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
323 msh1 recA3 heat shock 0.29 >More info 0.53 >More info WT heat shock above-ground parts Original data GEO bulk
324 AtLysM RLK1 mutant water 0.32 >More info 0.50 >More info WT water Original data GEO bulk
325 rosette leaves lcr 0.29 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
326 rosette leaves bdg 0.24 >More info 0.56 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
327 35SAvr 0.11 >More info 0.68 >More info Ecotype Col Original data GEO bulk
328 ANAC102 over-expressor 0.16 >More info 0.63 >More info C24 Original data GEO bulk
329 miR393 flg22 2h 0.27 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
330 cngc1-3 0.28 >More info 0.51 >More info Col-0 root Original data GEO bulk
331 oligomycin 1 h 0.25 >More info 0.54 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
332 Whole root - low pH 1H 0.21 >More info 0.58 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
333 rsa1 salt 0 h 0.24 >More info 0.54 >More info WT salt 0 h Control seedlings Original data GEO bulk
334 pmr4-1 powdery mildew 0.22 >More info 0.56 >More info WT powdery mildew uninoculated Original data GEO bulk
335 Mutant axr3-1 (IAA) 0.23 >More info 0.54 >More info Col (IAA) Original data GEO bulk
336 S14-150 0.26 >More info 0.51 >More info wt Original data GEO bulk
337 til1-1 22C 0.20 >More info 0.55 >More info Col-0 22C Original data GEO bulk
338 gun1-9 control 0.21 >More info 0.54 >More info Col-0 control Original data GEO bulk
339 treated group 0.51 >More info 0.23 >More info Control group Original data
340 SA Treated 0.66 >More info 0.08 >More info Water Original data GEO bulk
341 toc1-1-81hr 0.21 >More info 0.53 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
342 ABA JA 24h 0.16 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
343 dense canopy 0.23 >More info 0.51 >More info single (control) petiole Original data GEO bulk
344 2hr continuous KNO3 EPR cell 0.17 >More info 0.57 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
345 FarRed Light 45min -0.14 >More info -0.59 >More info White Light 45min Original data Light treatments
346 npr1-3 MOCK 48h -0.10 >More info -0.62 >More info Col-0 MOCK 48h Original data GEO bulk
347 Leaf wounded 0.13 >More info 0.58 >More info Leaf control vegetative leaf Original data GEO bulk
348 -Sulfate 24 h 0.17 >More info 0.53 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
349 ahg2-1sid2-2 0.17 >More info 0.52 >More info WT (Col) control Original data GEO bulk
350 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
351 35S:RPS4 rrs1-11 T0 0.16 >More info 0.51 >More info 35S:RPS4 T0 leaves Original data
352 siliques AtHb1 control 0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
353 NaCl Col 0.12 >More info 0.53 >More info Col Original data GEO bulk
354 vte2 leaves 120h LT 0.60 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
355 ptpks2 -0.05 >More info 0.69 >More info Col-WT leaves Original data GEO bulk
356 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
357 Col-0 24hpi A. brassicicola 0.58 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
358 cat2-short-day 4d 0.08 >More info 0.52 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
359 2hr continuous KNO3 and MSX PeR cell 0.10 >More info 0.50 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
360 chl1-5 Nitrate 0.5h -0.03 >More info -0.57 >More info WT Nitrate 0.5h Original data GEO bulk
361 Split KNO3 roots - 8hours 0.03 >More info 0.55 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
362 6h volatiles Sp. HRO-C48 0.06 >More info 0.51 >More info 6h untreated whole seedling Original data GEO bulk
363 pvip1 pvip2 seedling 0.58 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
364 2hr continuous KNO3 ECR cell -0.04 >More info 0.57 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
365 nar1-4/- 0.02 >More info 0.50 >More info WT whole seedling Original data GEO bulk
366 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
367 P. infestans 6 h (leaf) 0.65 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
368 HairpinZ 4 h (leaf) 0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
369 Leaf systemic -0.01 >More info 0.51 >More info Leaf control vegetative leaf Original data GEO bulk
370 Col PSTDC3000 24h 0.62 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
371 non-polysome mRNA eif3k 0.04 >More info -0.50 >More info non-polysome mRNA WT aerial part Original data GEO bulk
372 rgs1+no sugars 0.04 >More info -0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
373 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
374 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
375 msh1 recA3 untreated -0.07 >More info 0.52 >More info WT untreated above-ground parts Original data GEO bulk
376 2hr transitory KNO3 ECR cell -0.18 >More info 0.60 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
377 Light 3day hml -0.36 >More info 0.67 >More info 0h hml Original data