4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on RGA-GR-DEX
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List of experiments correlated with "RGA-GR-DEX"  Help Download transcriptome of top 30
Score Experiment Correlation from
RGA-GR-DEX		 Correlation to
RGA-GR-DEX		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 RGA-GR-DEX 1.00 >More info 1.00 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
2 Leafminer damaged seedlings 0.70 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
3 seedling 1.5h after HZE atm-1 0.62 >More info 0.61 >More info seedling day 1 unirradiated atm-1 1.5h Original data
4 low CO2 + dark 0.61 >More info 0.62 >More info normal CO2 + light Original data GEO bulk
5 WT (Col) glucose -0.65 >More info -0.57 >More info WT (Col) glucose seedlings Original data GEO bulk
6 4d red light grown hmr-5 seedlings 0.67 >More info 0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
7 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
8 Col-0 C2H4 24h 0.65 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
9 Shoot submergence 24h 0.64 >More info 0.54 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
10 low CO2 + light 0.72 >More info 0.45 >More info normal CO2 + light Original data GEO bulk
11 estradiole-induced ANAC059 -0.49 >More info -0.68 >More info transgenic (empty vector inducible system) Original data GEO bulk
12 ptpks2 -0.60 >More info -0.54 >More info Col-WT leaves Original data GEO bulk
13 Shoot dark control 7h 0.55 >More info 0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
14 oligomycin 4 h 0.71 >More info 0.43 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
15 ced1 -0.71 >More info -0.43 >More info WT PEG 6hr seedlings Original data GEO bulk
16 oas-a1.1 root -0.58 >More info -0.55 >More info WT-Untreated Root Original data GEO bulk
17 Nicotinamide-65hr 0.70 >More info 0.43 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
18 Fenclorim 4hr 0.63 >More info 0.49 >More info Acetone 4hr root Original data GEO bulk
19 GO5; 0h switch to ambient CO2 concentrations; -0.64 >More info -0.47 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
20 cngc4 0.57 >More info 0.54 >More info Ws-2 Seedlings Original data GEO bulk
21 Nicotinamide-93hr 0.70 >More info 0.40 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
22 1 h Light Total RNA -0.54 >More info -0.56 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
23 toc1-1-77hr 0.61 >More info 0.48 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
24 petiole in D 0.60 >More info 0.49 >More info petiole in WL petioles Original data GEO bulk
25 TNT-seedlings 0.47 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
26 pnp1-1 3h +P 0.64 >More info 0.44 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
27 Nicotinamide-69hr 0.70 >More info 0.38 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
28 Nicotinamide-73hr 0.67 >More info 0.41 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
29 gun4-1 0.67 >More info 0.40 >More info WT Col-0 seedling Original data GEO bulk
30 CMP 4hr 0.66 >More info 0.41 >More info Acetone 4hr root Original data GEO bulk
31 sid2-2 9 hpi A. brassicicola 0.65 >More info 0.42 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
32 Dark 1day wt 0.70 >More info 0.37 >More info 0h wt Original data
33 vte1-1 3d vernalization -0.64 >More info -0.42 >More info WT 3d vernalization Original data GEO bulk
34 Day Time Treatment -0.52 >More info -0.54 >More info Day Time Control 1hr white light pulse aerial rosette Original data
35 Nicotinamide-89hr 0.65 >More info 0.41 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
36 leaf blade in D 0.55 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
37 Shoot dark control 24h 0.48 >More info 0.58 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
38 Dark 1day ivd 0.65 >More info 0.40 >More info 0h ivd Original data
39 Dark 1day hml 0.67 >More info 0.38 >More info 0h hml Original data
40 Dark 3day hml 0.67 >More info 0.38 >More info 0h hml Original data
41 Dark 3day wt 0.64 >More info 0.41 >More info 0h wt Original data
42 Dark 6h ivd 0.59 >More info 0.46 >More info 0h ivd Original data
43 Root submergence 7h 0.55 >More info 0.50 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
44 Nicotinamide-53hr 0.69 >More info 0.36 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
45 spch 0.57 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
46 Uniconazole 12 h 0.69 >More info 0.36 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
47 1 h Light IP RNA -0.51 >More info -0.53 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
48 Root dark control 7h 0.52 >More info 0.52 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
49 pap1-D/tt4 0.58 >More info 0.46 >More info Col-0 aerial part Original data
50 tt4 0.55 >More info 0.49 >More info Col-0 aerial part Original data
51 CMP 24hr 0.65 >More info 0.39 >More info Acetone 24hr root Original data GEO bulk
52 Dark 3day ivd 0.62 >More info 0.41 >More info 0h ivd Original data
53 gun5 norflurazon 0.61 >More info 0.42 >More info gun5 control Original data GEO bulk
54 CAX1/CAX3 mutant 0.60 >More info 0.43 >More info Col whole plant Original data GEO bulk
55 Dark 6h hml 0.58 >More info 0.45 >More info 0h hml Original data
56 WT +Pep2 2h 0.68 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
57 Dark 2day wt 0.67 >More info 0.36 >More info 0h wt Original data
58 WT AntimycinA 3h 0.60 >More info 0.43 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
59 Laer pretreat GA Flg22 1h 0.32 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
60 A2hsfa1-ox in quadruple mutant -0.61 >More info -0.41 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
61 Dark 2day hml 0.66 >More info 0.36 >More info 0h hml Original data
62 Dark 6h wt 0.60 >More info 0.42 >More info 0h wt Original data
63 JA 0.57 >More info 0.44 >More info Col-0 mock Whole seedling Original data GEO bulk
64 GO5; 8h switch to ambient CO2 concentrations; 0.56 >More info 0.45 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
65 DC3000 7h 0.64 >More info 0.36 >More info Mock 7h DC3000 Original data GEO bulk
66 Leafminer locally damaged thaliana seedlings 0.70 >More info 0.30 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
67 high-R:FR bud axillary -0.54 >More info -0.46 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
68 Root submergence 24h 0.52 >More info 0.48 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
69 hrpA 7h 0.61 >More info 0.39 >More info Mock 7h hrpA Original data GEO bulk
70 Col-Luc WT 3h antimycin A 0.67 >More info 0.33 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
71 siliques AtHb1 control 0.48 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
72 Root dark control 24h 0.49 >More info 0.51 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
73 seedling 1.5h after HZE WT 0.49 >More info 0.50 >More info seedling day 1 unirradiated WT 1.5h Original data
74 Fenclorim 24hr 0.66 >More info 0.32 >More info Acetone 24hr root Original data GEO bulk
75 Nicotinamide-49hr 0.69 >More info 0.29 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
76 rosette Light Wounded 0.67 >More info 0.31 >More info rosette Light Control Original data GEO bulk
77 Col-0 ozone 0.67 >More info 0.31 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
78 Mutant ag-12(shoot apex) -0.59 >More info -0.39 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
79 seedlings protease IV 0.69 >More info 0.28 >More info seedlings nontreated control whole seedling Original data
80 pmr5 pmr6 0.61 >More info 0.35 >More info Col-0 Original data GEO bulk
81 gir flower 33d 0.61 >More info 0.35 >More info Col-7 flower 33d flower Original data GEO bulk
82 col-5 DC3000 12h 0.70 >More info 0.26 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
83 flu over-tAPX 0.59 >More info 0.37 >More info WT Col Original data GEO bulk
84 Pseudomonas 0.39 >More info 0.57 >More info Control pseudomonas treated whole seedling Original data GEO bulk
85 Col-0 +lincomycin 0.43 >More info 0.53 >More info Col-0 -lincomycin Original data GEO bulk
86 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.67 >More info 0.28 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
87 atgsnor1-3-avrB-6h 0.55 >More info 0.40 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
88 detached inflorescences 24h 0.51 >More info 0.44 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
89 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.65 >More info 0.30 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
90 Col-0 SA 0.61 >More info 0.34 >More info Col-0 Original data GEO bulk
91 AgNO3 3 h 0.62 >More info 0.33 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
92 wt systemic wounding 0.67 >More info 0.27 >More info wt control leaves Original data GEO bulk
93 Col BTH 0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
94 flu 0.57 >More info 0.37 >More info WT Col Original data GEO bulk
95 Nicotinamide-61hr 0.60 >More info 0.34 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
96 rosette leaves fdh 0.62 >More info 0.32 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
97 gai Control 0.60 >More info 0.34 >More info Laer Control leaf discs Original data GEO bulk
98 Nicotinamide-57hr 0.65 >More info 0.29 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
99 35S::PI ap3-3 35S::AP-GR +DEX 0.37 >More info 0.57 >More info 0hr DEX Original data GEO bulk
100 Nicotinamide-77hr 0.59 >More info 0.34 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
101 Mutant ap1-15(flower) 0.50 >More info 0.43 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
102 ACC 3 h 0.38 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
103 Infected pft1 leaf 0.59 >More info 0.33 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
104 Chitosan 3h Treatment 0.71 >More info 0.21 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
105 Nicotinamide-85hr 0.65 >More info 0.26 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
106 1.5 hr ammonium 0.51 >More info 0.40 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
107 pepr1-1 Pepr2-3 +Pep2 2h -0.66 >More info -0.25 >More info WT +Pep2 2h Pep2 Original data GEO bulk
108 Te ozone 0.63 >More info 0.28 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
109 Propiconazole 12 h 0.70 >More info 0.21 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
110 Pst-DC3000(avrRpm1)-4hpi 0.61 >More info 0.30 >More info Pst-DC3000-4hpi Original data GEO bulk
111 CT101 ozone 0.63 >More info 0.27 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
112 gpa1 +ABA LF 0.51 >More info 0.39 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
113 GST NPP1 4 h (leaf) 0.67 >More info 0.23 >More info Mock 4 h (leaf) Original data Elicitor treatments
114 petiole in FRD 0.54 >More info 0.36 >More info petiole in WL petioles Original data GEO bulk
115 coi1-16 ein2 sid2 ctrl -0.67 >More info -0.23 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
116 DC3000 24h 0.60 >More info 0.30 >More info Mock 24h DC3000 Original data GEO bulk
117 Col-0 under 4 days salt 0.56 >More info 0.33 >More info Col-0 under control 4 days salt treatment rosette Original data
118 root protophloem 40 mM NaCl 0.55 >More info 0.34 >More info root protophloem Original data GEO bulk
119 Cor 10h 0.56 >More info 0.33 >More info Mock 10h Cor Original data GEO bulk
120 msh1 recA3 heat shock 0.37 >More info 0.52 >More info WT heat shock above-ground parts Original data GEO bulk
121 Col-0 9 hpi A. brassicicola 0.57 >More info 0.32 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
122 17 2h labelled 0.69 >More info 0.20 >More info 27 1h labelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
123 Inflorescence ngaquad -0.34 >More info -0.54 >More info Inflorescence wt Original data GEO bulk
124 ein2-1 9 hpi A. brassicicola 0.60 >More info 0.28 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
125 DC3000 2 h (leaf) 0.62 >More info 0.26 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
126 Mutant gh3.5-1D (AvrRpt2) 0.53 >More info 0.35 >More info Col-0 (AvrRpt2) Original data GEO bulk
127 hrcC 0.58 >More info 0.30 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
128 col-5 hrpA 12h 0.59 >More info 0.29 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
129 M6PR transgenic 0mM NaCl 0.55 >More info 0.32 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
130 Col-0-avrB-6h 0.55 >More info 0.32 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
131 Nicotinamide-81hr 0.65 >More info 0.22 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
132 E.coli 0157 H7 7h 0.61 >More info 0.26 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
133 HSP90 Reduced RNAi-C1 0.52 >More info 0.35 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
134 anac017-2 AntimycinA 3h -0.51 >More info -0.36 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
135 WUSp cells 0.63 >More info 0.24 >More info Protoplast Induced Original data GEO bulk
136 Mutant lfy-12(flower) 0.26 >More info 0.61 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
137 E.coli TUV86 2 fliC 7h 0.58 >More info 0.29 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
138 Paclobutrazol 12 h 0.66 >More info 0.20 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
139 HopZ1a treated ulp1c ulp1d 0.65 >More info 0.21 >More info col Original data GEO bulk
140 IMI 4mM 0.60 >More info 0.26 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
141 C24 ozone 0.65 >More info 0.20 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
142 WT flg22 2h 0.52 >More info 0.33 >More info WT 0h Leaf tissue Original data GEO bulk
143 HSP90 Reduced RNAi-A2 0.55 >More info 0.30 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
144 6h +Pi -0.52 >More info -0.33 >More info 6h -Pi root Original data GEO bulk
145 opr3 OPDA 2 h 0.18 >More info 0.67 >More info opr3 0 h Original data GEO bulk
146 WT Bc inoculation 14h 0.60 >More info 0.25 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
147 Te 1d 0.57 >More info 0.28 >More info Te CA Leaves Original data
148 tor mutant glucose 0.57 >More info 0.28 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
149 gun1-9 control -0.35 >More info -0.50 >More info Col-0 control Original data GEO bulk
150 rosette Dark Wounded 0.55 >More info 0.29 >More info rosette Dark Control Original data GEO bulk
151 leaf13 0.64 >More info 0.20 >More info unwounded leaves none Original data GEO bulk
152 +1.6 mM Tween 20 1 h. 0.54 >More info 0.30 >More info +distilled water 1 h. Original data GEO bulk
153 mkk1/mkk2 24h BTH rep 0.53 >More info 0.31 >More info Col-0 24h BTH rep Original data GEO bulk
154 oligomycin 1 h 0.32 >More info 0.52 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
155 ulp1c ulp1d +Pto 0.61 >More info 0.23 >More info ulp1c ulp1d mock Original data GEO bulk
156 Flagellin 4 h (leaf) 0.61 >More info 0.23 >More info Mock 4 h (leaf) Original data Elicitor treatments
157 Cocultivation 8 hrs root 0.59 >More info 0.25 >More info Mock cocultivation 8 hrs root Root Original data
158 Phytoprostane A1 4 h 0.54 >More info 0.29 >More info Col-0 Original data GEO bulk
159 WT+H2O2 0.58 >More info 0.25 >More info WT H2O2 Original data GEO bulk
160 hrpA fliC 7h 0.57 >More info 0.26 >More info Mock 7h hrpA fliC Original data GEO bulk
161 WT 24H Cold 0.57 >More info 0.26 >More info WT control Original data GEO bulk
162 edr1 36 h powdery mildew 0.61 >More info 0.22 >More info Col-0 36 h powdery mildew Original data GEO bulk
163 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.24 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
164 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
165 pmr5 0.51 >More info 0.31 >More info Col-0 Original data GEO bulk
166 GST 4 h (leaf) 0.53 >More info 0.29 >More info Mock 4 h (leaf) Original data Elicitor treatments
167 WT Col-0 Bgh inoculated 0.56 >More info 0.26 >More info WT Col-0 Un-inoculated Original data GEO bulk
168 HopZ1a treated 0.63 >More info 0.19 >More info col Original data GEO bulk
169 WT-SA 0.61 >More info 0.21 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
170 HSP90 Reduced RNAi-B1 0.57 >More info 0.25 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
171 coi1-16 ein2 sid2 ozone 0.63 >More info 0.18 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
172 WT 6H Cold 0.50 >More info 0.31 >More info WT control Original data GEO bulk
173 root epidermis and lateral root cap pH4.6 0.54 >More info 0.27 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
174 plant (Col-0) 4h OPDA 0.57 >More info 0.24 >More info plant (Col-0) 4h control Original data GEO bulk
175 sfr6 control -0.57 >More info -0.24 >More info WT control All aerial tissue Original data GEO bulk
176 OPDA 4 h 0.57 >More info 0.24 >More info Col-0 Original data GEO bulk
177 ataf1-1 mutant Col-0 Bgh inoculated 0.59 >More info 0.22 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
178 tcp13 0.22 >More info 0.59 >More info WT inflorescences Original data GEO bulk
179 Kas-1 -Fe 48h -0.54 >More info -0.26 >More info Kas-1 +Fe 24h roots Original data GEO bulk
180 Kas -Fe 48h Roots -0.54 >More info -0.26 >More info Kas +Fe 24h Roots Original data GEO bulk
181 npr1-3 DCA 48h 0.52 >More info 0.28 >More info npr1-3 MOCK 48h Original data GEO bulk
182 ein2 1% sucrose 14-day-old -0.52 >More info -0.28 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
183 Lipopolysaccaride4 h (leaf) 0.56 >More info 0.24 >More info Mock 4 h (leaf) Original data Elicitor treatments
184 vtc1-1 -0.26 >More info -0.54 >More info Col-0 whole plant Original data GEO bulk
185 ckh1 CK200 0.58 >More info 0.22 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
186 scrm-D:mute 0.57 >More info 0.23 >More info Col-0 WT whole seedling Original data GEO bulk
187 wrky33 Bc inoculation 14h 0.59 >More info 0.20 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
188 AvrRpt2 Col-0 6hpi 0.60 >More info 0.19 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
189 PBZ 0.50 >More info 0.29 >More info none PBZ Rosette Original data GEO bulk
190 Atss3 Light1 -0.60 >More info -0.19 >More info Atss3 Dark0.5 Original data GEO bulk
191 SOS1 0mM NaCl 0.60 >More info 0.19 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
192 auxin and brassinazole seedlings 0.65 >More info 0.14 >More info auxin seedlings Original data GEO bulk
193 Cor 24h 0.53 >More info 0.26 >More info Mock 24h Cor Original data GEO bulk
194 8h-DC3000 avrRpm1 0.55 >More info 0.24 >More info 8h-DC3000 leaves Original data GEO bulk
195 Sulfometuron EC50 0.50 >More info 0.29 >More info Carrier Original data GEO bulk
196 8hr-pH4.5 0.57 >More info 0.22 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
197 whole roots 140 mM NaCl 30 minutes 0.57 >More info 0.22 >More info whole roots standard Original data GEO bulk
198 gh3.5-1D 48 hpi 0.53 >More info 0.25 >More info Col-0 uninoculated Original data GEO bulk
199 rdo4 siliques 0.51 >More info 0.27 >More info WT Ler siliques Original data GEO bulk
200 safener treated 0.53 >More info 0.25 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
201 FAMA induced 4h -0.16 >More info -0.62 >More info control 4h Whole seedling Original data GEO bulk
202 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
203 rosettes WT drought 0.50 >More info 0.27 >More info rosettes WT watered Original data GEO bulk
204 shoots WT 0uM Fe 0.50 >More info 0.27 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
205 atmospheric CO2 low Mg shoot 0.67 >More info 0.10 >More info atmospheric CO2 normal Mg shoot Shoot Original data
206 msh1 albino 0.55 >More info 0.21 >More info WT aerial part Original data GEO bulk
207 DFPM 0.50 >More info 0.26 >More info control Original data GEO bulk
208 Blue Light 4 h 0.52 >More info 0.24 >More info White Light 4 h Original data Light treatments
209 ga1-3 1h GA4 -0.53 >More info -0.23 >More info ga1-3 1h water shoots Original data GEO bulk
210 COL-0-Fe--shoot -0.53 >More info -0.23 >More info COL-0-Ctrl--shoot shoot Original data
211 Laer pretreat JA Flg22 2h 0.56 >More info 0.20 >More info Laer pretreat water control leaf discs Original data GEO bulk
212 root epidermis and lateral root cap 40 mM NaCl 0.53 >More info 0.23 >More info root epidermis and lateral root cap Original data GEO bulk
213 WT +elf18 2h 0.64 >More info 0.11 >More info WT untreated elf18 Original data GEO bulk
214 35S:RPS4 eds1-2 24h -0.54 >More info -0.21 >More info 35S:RPS4 24h leaves Original data
215 aphid saliva treated 0.24 >More info 0.51 >More info control aphid saliva treated leaves Original data GEO bulk
216 Myzus persicae saliva 0.24 >More info 0.51 >More info Control Original data GEO bulk
217 sid2-avrB-6h 0.51 >More info 0.23 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
218 gapcp1gapcp2 ABA 0.23 >More info 0.51 >More info WT ABA ABA seedling Original data GEO bulk
219 6-trichlorophenoxyacetic acid 3 h 0.17 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
220 Kas -Fe 24h Roots -0.58 >More info -0.15 >More info Kas +Fe 24h Roots Original data GEO bulk
221 AtNIGT1/HRS1 +CHX + DEX + Nitrate 0.57 >More info 0.16 >More info AtNIGT1/HRS1 +CHX - DEX + Nitrate Original data
222 Kas-1 -Fe 24h -0.58 >More info -0.15 >More info Kas-1 +Fe 24h roots Original data GEO bulk
223 efr-1 +elf18 10h -0.57 >More info -0.16 >More info WT +elf18 10h elf18 Original data GEO bulk
224 pnp1-1 3h -P 0.51 >More info 0.22 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
225 Col whole leaf 3dpi 0.20 >More info 0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
226 Cs root -0.21 >More info -0.52 >More info control root Original data GEO bulk
227 Mutant ap3-6(shoot apex) -0.52 >More info -0.20 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
228 Shoot submergence 7h 0.72 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
229 bak1-3 +Pep2 10h 0.52 >More info 0.20 >More info WT +Pep2 10h Pep2 Original data GEO bulk
230 scrm-D 0.60 >More info 0.12 >More info Col-0 WT whole seedling Original data GEO bulk
231 flu dark 8hours/30 minute light 0.55 >More info 0.16 >More info col dark 8hours/30 minute light Original data GEO bulk
232 C24 24h cold -0.54 >More info -0.17 >More info Col 24h cold leaf Original data GEO bulk
233 FILp cells 0.56 >More info 0.15 >More info Protoplast Induced Original data GEO bulk
234 WT 2-4h Xanthomonas 0.58 >More info 0.13 >More info WT T0 Original data GEO bulk
235 Col-0 Flg22 4h 0.57 >More info 0.14 >More info Col-0 H2O 4h Original data GEO bulk
236 plant (tga2-5-6) 4h OPDA 0.50 >More info 0.21 >More info plant (tga2-5-6) 4h control Original data GEO bulk
237 rdo3 siliques 0.53 >More info 0.18 >More info WT Ler siliques Original data GEO bulk
238 arf2 brz -0.53 >More info -0.18 >More info arf2 mock Original data GEO bulk
239 root - 04% oxygen - 2h 0.11 >More info 0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
240 pip3 At2g19270 TDNA 9 0.19 >More info 0.52 >More info Col-0 whole plant Original data GEO bulk
241 whole roots 140 mM NaCl 1 hour 0.54 >More info 0.16 >More info whole roots standard Original data GEO bulk
242 dor drought 0.55 >More info 0.15 >More info WT drought Original data GEO bulk
243 WT +elf18 10h 0.65 >More info 0.04 >More info WT untreated elf18 Original data GEO bulk
244 35S:RPS4 eds1-2 8h -0.57 >More info -0.12 >More info 35S:RPS4 8h leaves Original data
245 Pto inoculated 0.62 >More info 0.06 >More info col Original data GEO bulk
246 Dark 2day ivd 0.69 >More info -0.01 >More info 0h ivd Original data
247 Col 1d 0.59 >More info 0.09 >More info Col CA Leaves Original data
248 phr1 phl1 Root-Pi 0.50 >More info 0.18 >More info WT Shoot+Pi roots Original data GEO bulk
249 npr1-1 SA -0.51 >More info -0.16 >More info Col-0 SA complete seedling Original data
250 CLV3n cells 0.62 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
251 Leafminer systemically damaged thaliana seedlings 0.56 >More info 0.11 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
252 Phaseolicola 2 h (leaf) 0.62 >More info 0.04 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
253 pif4pif5 low R/FR 0.53 >More info 0.13 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
254 dicamba 0.50 >More info 0.16 >More info WT mock whole seedling Original data GEO bulk
255 CMV-WT 0.56 >More info 0.09 >More info Mock-At Aerial tissues Original data GEO bulk
256 Tsu -Fe 48h Shoots 0.53 >More info 0.12 >More info Tsu +Fe 24h Shoots Original data GEO bulk
257 Col0 roots 2hr KNO3 nitrogen 0.07 >More info 0.58 >More info Col0 roots 2hr KCl control root Original data GEO bulk
258 chito-tetramer 0.50 >More info 0.14 >More info Col Mock Original data GEO bulk
259 ceh1 mutant 0.57 >More info 0.07 >More info Parent line Original data
260 Aerobic e1 ate2 0.07 >More info 0.57 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
261 WT-NOCO2 INFECTED 0.50 >More info 0.13 >More info WT-MOCK Original data GEO bulk
262 Wounding Stress3 h (shoot) 0.50 >More info 0.13 >More info Stress mock 3 h (shoot) Original data Stress treatments
263 rts1-5 0.55 >More info 0.08 >More info null-mutant whole plant Original data GEO bulk
264 dde2-2 9 hpi A. brassicicola 0.50 >More info 0.12 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
265 HairpinZ 4 h (leaf) 0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
266 OH1 0.51 >More info 0.11 >More info Col-0 leaves Original data GEO bulk
267 glk1 glk2 GLK1-GR +DEX 24h -0.59 >More info -0.03 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
268 Col-0 V. longisporum-inoculated 48 hpi 0.56 >More info 0.05 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
269 root - 04% oxygen - 48h 0.07 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
270 seedling 3h after HZE WT 0.59 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
271 WT cold 12 h 0.60 >More info 0.01 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
272 sav1-1 light 0.50 >More info 0.10 >More info Col-0 light seedlings Original data GEO bulk
273 Rsch 1d 0.51 >More info 0.09 >More info Rsch CA Leaves Original data
274 short 8-degree- 0.55 >More info 0.04 >More info control short Original data GEO bulk
275 Laer Flg22 2h 0.54 >More info 0.05 >More info Laer Control leaf discs Original data GEO bulk
276 estradiole-induced ANAC092 -0.03 >More info -0.56 >More info transgenic (empty vector inducible system) Original data GEO bulk
277 Laer Flg22+GA 2h 0.56 >More info 0.02 >More info Laer Control leaf discs Original data GEO bulk
278 miR393 flg22 2h 0.55 >More info 0.03 >More info WT 0h Leaf tissue Original data GEO bulk
279 ice1 control 0.50 >More info 0.08 >More info WT control Original data GEO bulk
280 Tsu -Fe 24h Shoots 0.55 >More info 0.02 >More info Tsu +Fe 24h Shoots Original data GEO bulk
281 17 2h total 0.60 >More info -0.03 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
282 MYB51 OE -0.58 >More info 0.01 >More info WT for ATR1/MYB51 Original data GEO bulk
283 cpr5scv1 0.50 >More info 0.06 >More info WT(COL) Original data GEO bulk
284 shoot-10 μM DEX- 24hr 0.54 >More info 0.02 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
285 ckh2 CK25 0.57 >More info -0.01 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
286 root - 08% oxygen - 30min -0.03 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
287 dsr1 SA Treated -0.52 >More info -0.03 >More info SA Whole seedling Original data GEO bulk
288 hen1 -0.53 >More info -0.02 >More info Ler Original data GEO bulk
289 AFB1 flg22 2h 0.52 >More info 0.03 >More info WT 0h Leaf tissue Original data GEO bulk
290 rrd1 IBA -0.60 >More info 0.06 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
291 Heat shock optimum -0.11 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
292 non-polysome mRNA eif3k -0.02 >More info -0.52 >More info non-polysome mRNA WT aerial part Original data GEO bulk
293 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
294 P.p 10.5hai 0.52 >More info 0.01 >More info At-Control roots Original data GEO bulk
295 cop1 Seedling BL+ABA 0.52 >More info 0.01 >More info WT Seedling BL+ABA Original data GEO bulk
296 Col-0 24hpi A. brassicicola 0.51 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
297 tcp13/+ tcp14/+ 0.01 >More info 0.52 >More info WT inflorescences Original data GEO bulk
298 wavy 0.51 >More info 0.01 >More info WT Original data GEO bulk
299 mp-B4149 mutant IAA -0.55 >More info 0.04 >More info GR-bdl IAA Original data GEO bulk
300 Laer Flg22+GA 1h 0.53 >More info -0.03 >More info Laer Control leaf discs Original data GEO bulk
301 short 10-degree- 0.53 >More info -0.04 >More info control short Original data GEO bulk
302 penta Flg22 2h 0.50 >More info -0.01 >More info Laer Flg22 2h leaf discs Original data GEO bulk
303 in vivo pollen tube -0.50 >More info 0.01 >More info Control for tissue data pollen tube Original data GEO bulk
304 flower-buds -0.52 >More info 0.04 >More info Control for tissue data Original data GEO bulk
305 cpr5 0.54 >More info -0.06 >More info WT seedling Original data GEO bulk
306 Inflorescences ler -0.51 >More info 0.03 >More info Control for tissue data inflorescences Original data GEO bulk
307 Col PSTDC3000 24h 0.61 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
308 P. infestans 6 h (leaf) 0.62 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
309 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info -0.03 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
310 npr1-3 MOCK 48h -0.54 >More info 0.08 >More info Col-0 MOCK 48h Original data GEO bulk
311 sid2-1 cold -0.52 >More info 0.06 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
312 siliques -0.53 >More info 0.07 >More info Control for tissue data Original data GEO bulk
313 35S:VND7-VP16-GR+CHX 0.10 >More info -0.55 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
314 arp6-10 24h at 27 ºC 0.51 >More info -0.06 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
315 Shoot apex inflorescence (after bolting) -0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
316 Apex BLS>>TCP4 14DAS -0.60 >More info 0.16 >More info Apex Col 14DAS Original data GEO bulk
317 Laer Flg22 1h 0.51 >More info -0.08 >More info Laer Control leaf discs Original data GEO bulk
318 S58-2 0.50 >More info -0.07 >More info wt Original data GEO bulk
319 shoot hypoxia pCER5 -0.51 >More info 0.09 >More info shoot hypoxia total Original data GEO bulk
320 amiRAP aerobic 0.50 >More info -0.08 >More info WT aerobic aerobic Original data GEO bulk
321 4d red light grown hmr-22 seedlings 0.57 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
322 Cor hrpS 10h 0.53 >More info -0.18 >More info Mock 10h Cor hrpS Original data GEO bulk
323 pistil 8.0HAP 0.55 >More info -0.21 >More info unpollinated pistil pistil Original data GEO bulk
324 CLO 4mM 0.52 >More info -0.18 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
325 pistil 0.5HAP 0.55 >More info -0.25 >More info unpollinated pistil pistil Original data GEO bulk
326 pistil 3.5HAP 0.53 >More info -0.24 >More info unpollinated pistil pistil Original data GEO bulk
327 SA 4mM 0.53 >More info -0.24 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
328 downy mildew cotyledons late stage 0.53 >More info -0.34 >More info mock inoculated Cotyledons Original data GEO bulk
329 CCA1-ox 6am non-polysomal -0.32 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
330 ahg2-1 -0.50 >More info 0.33 >More info WT (Col) control Original data GEO bulk