4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on GA
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List of experiments correlated with "GA"  Help Download transcriptome of top 30
Score Experiment Correlation from
GA		 Correlation to
GA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 GA 1.00 >More info 1.00 >More info none GA Rosette Original data GEO bulk
2 npr1 sni1 brca2a SA -0.74 >More info -0.75 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
3 npr1 sni1 SA 0.75 >More info 0.69 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
4 gai MeJA 1h -0.72 >More info -0.69 >More info Laer MeJA 1h leaf discs Original data GEO bulk
5 CMV-WT 0.72 >More info 0.68 >More info Mock-At Aerial tissues Original data GEO bulk
6 35S:RPS4 eds1-2 2h -0.66 >More info -0.72 >More info 35S:RPS4 2h leaves Original data
7 WT-Dry 0.69 >More info 0.69 >More info WT-CK dehydration treatment 1h Original data
8 Leaf wounded 0.63 >More info 0.74 >More info Leaf control vegetative leaf Original data GEO bulk
9 WT+chitooctaose 0.68 >More info 0.68 >More info WT+water chitooctaose seedlings Original data GEO bulk
10 A. thaliana-A. lyrata hybrid -0.64 >More info -0.72 >More info A. thaliana mature leaves before flowering Original data GEO bulk
11 Col-0 DCA 48h 0.67 >More info 0.69 >More info Col-0 MOCK 48h Original data GEO bulk
12 rosette Dark Wounded 0.71 >More info 0.64 >More info rosette Dark Control Original data GEO bulk
13 WT 3h -P 0.68 >More info 0.67 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
14 4C 2h(SOIL) 0.60 >More info 0.73 >More info 4C 0h(SOIL) Original data GEO bulk
15 del1-1 mutant 5d uninfected 0.57 >More info 0.74 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
16 cs26 short-day -0.70 >More info -0.61 >More info Leaves-WT-SD leaf Original data GEO bulk
17 downy mildew cotyledons late stage 0.71 >More info 0.60 >More info mock inoculated Cotyledons Original data GEO bulk
18 sid2-1 cold -0.66 >More info -0.65 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
19 rosette Light Wounded 0.66 >More info 0.64 >More info rosette Light Control Original data GEO bulk
20 camta3-2 0.60 >More info 0.69 >More info WT Original data GEO bulk
21 smg7b-1 0.66 >More info 0.63 >More info WT whole plant Original data GEO bulk
22 OE WRKY63.3 high light 0.66 >More info 0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
23 Col-0 INA 48h 0.58 >More info 0.69 >More info Col-0 MOCK 48h Original data GEO bulk
24 Col BTH 0.60 >More info 0.67 >More info Col rosettes Original data GEO bulk
25 Col whole leaf 6hpi 0.62 >More info 0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
26 FLIGHT TAGESB plate6 ROOTS 0.56 >More info 0.70 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
27 TNT-seedlings 0.60 >More info 0.66 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
28 Leaf systemic 0.59 >More info 0.66 >More info Leaf control vegetative leaf Original data GEO bulk
29 bHLH122 ox -0.65 >More info -0.60 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
30 chito-octamer 0.67 >More info 0.57 >More info Col Mock Original data GEO bulk
31 Col ozone 3h 0.63 >More info 0.61 >More info Col clean-air 3h ozone Original data GEO bulk
32 bZIP1ko mutant N+Light- 0.63 >More info 0.61 >More info WT-sib N+Light- whole plant Original data GEO bulk
33 irradiated leaf (cmt 5d) 0.74 >More info 0.49 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
34 Col whole leaf 7dpi 0.64 >More info 0.59 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
35 WT chitooctaose 0.67 >More info 0.56 >More info WT water Original data GEO bulk
36 eds16 whole leaf 5dpi -0.55 >More info -0.67 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
37 seedlings-week-old RECA1-overexpressing
transgenic		 0.67 >More info 0.55 >More info seedlings-week-old Col-0 seedlings Original data
38 aba1 hypocotyl 0.58 >More info 0.64 >More info Ler hypocotyl hypocotyl Original data GEO bulk
39 35S:RPS4 eds1-2 8h -0.64 >More info -0.58 >More info 35S:RPS4 8h leaves Original data
40 Elevated CO2 AMPLE N NIGHT 0.52 >More info 0.69 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
41 Selenate (root) 0.63 >More info 0.58 >More info Ws (root) Original data GEO bulk
42 Root Selenate 0.63 >More info 0.58 >More info Root control 40 micromolar selenate Root Original data GEO bulk
43 sni1 0.52 >More info 0.69 >More info WT Original data GEO bulk
44 Cycloheximide 3 h 0.69 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
45 pmr5 pmr6 0.70 >More info 0.50 >More info Col-0 Original data GEO bulk
46 Col0-PsmES4326-24hpi 0.59 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
47 aba3-1 0.55 >More info 0.64 >More info wt Original data GEO bulk
48 Rsch 8h 0.62 >More info 0.57 >More info Rsch CA Leaves Original data
49 cpr5 0.63 >More info 0.56 >More info WT seedling Original data GEO bulk
50 WT powdery mildew 0.57 >More info 0.62 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
51 Elevated CO2 AMPLE N DAY 0.52 >More info 0.66 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
52 pmr5 0.65 >More info 0.53 >More info Col-0 Original data GEO bulk
53 cs26 long day 0.65 >More info 0.53 >More info Leaves-WT-LD leaf Original data GEO bulk
54 anac017-2 AntimycinA 3h -0.72 >More info -0.46 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
55 Cd 24h root -0.73 >More info -0.45 >More info WT-Untreated Shoot Original data GEO bulk
56 +1.6 mM Tween 20 1 h. 0.60 >More info 0.58 >More info +distilled water 1 h. Original data GEO bulk
57 sid2 -0.49 >More info -0.69 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
58 seedlings protease IV 0.66 >More info 0.51 >More info seedlings nontreated control whole seedling Original data
59 cpr5 0.59 >More info 0.58 >More info WT(COL) Original data GEO bulk
60 bio4-1 mutant leaves 0.68 >More info 0.49 >More info WT leaves leaves Original data GEO bulk
61 lht1 untreated 0.58 >More info 0.59 >More info WT untreated untreated leaf Original data GEO bulk
62 Col-Luc WT 3h antimycin A 0.67 >More info 0.50 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
63 UV Stress 24 h (shoot) 0.52 >More info 0.64 >More info Stress mock 24 h (shoot) Original data Stress treatments
64 WT-NOCO2 INFECTED 0.68 >More info 0.48 >More info WT-MOCK Original data GEO bulk
65 WT-SA 0.63 >More info 0.53 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
66 Col ozone 2d 0.56 >More info 0.60 >More info Col clean-air 2d ozone Original data GEO bulk
67 Mutant NahG(leaf) -0.56 >More info -0.60 >More info Col-0 (leaf) Original data GEO bulk
68 chito-tetramer 0.61 >More info 0.54 >More info Col Mock Original data GEO bulk
69 35S::MBF1c 0.60 >More info 0.55 >More info control Original data GEO bulk
70 S58-2 0.61 >More info 0.54 >More info wt Original data GEO bulk
71 9 hr Hypoxia 1 hr recovery IP RNA 0.67 >More info 0.48 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
72 ataf1-1 mutant Col-0 Bgh inoculated 0.66 >More info 0.49 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
73 M6PR transgenic leaf 0mM NaCl 0.57 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
74 ein5-1 ski2-3 0.64 >More info 0.50 >More info Col-0 aerial tissue Original data
75 smg5-2 0.67 >More info 0.47 >More info WT whole plant Original data GEO bulk
76 myb61 cork 0.54 >More info 0.60 >More info wt cork cork Original data GEO bulk
77 camta1/3 warm 0.53 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
78 Mutant siz1-3 (Drought) 0.66 >More info 0.47 >More info Col-0 (Drought) Original data GEO bulk
79 siz1-3 drought 0.66 >More info 0.47 >More info Col-0 drought Original data GEO bulk
80 S15-118 0.55 >More info 0.58 >More info wt Original data GEO bulk
81 WT flg22 2h 0.61 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
82 Wounding Stress3 h (shoot) 0.60 >More info 0.53 >More info Stress mock 3 h (shoot) Original data Stress treatments
83 GST 4 h (leaf) 0.63 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
84 +GA-30mins 0.57 >More info 0.55 >More info -30mins whole plant Original data GEO bulk
85 eds16 whole leaf 0h UI -0.44 >More info -0.67 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
86 rsa3-1 Na 24h 0.50 >More info 0.61 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
87 WT flg22 1h 0.64 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
88 miR393 flg22 1h 0.60 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
89 Shoot -K 0.56 >More info 0.54 >More info Control-shoot Original data GEO bulk
90 K starvation (shoot) 0.56 >More info 0.54 >More info Ws (shoot) Original data GEO bulk
91 abi1 hypocotyl 0.42 >More info 0.68 >More info Ler hypocotyl hypocotyl Original data GEO bulk
92 Chitin 0.65 >More info 0.44 >More info Col C Original data GEO bulk
93 npr1 sni1 ssn2 SA -0.65 >More info -0.44 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
94 pepr1-1 Pepr2-3 +Pep2 2h -0.65 >More info -0.44 >More info WT +Pep2 2h Pep2 Original data GEO bulk
95 1h +Pi -0.53 >More info -0.56 >More info 1h -Pi root Original data GEO bulk
96 Col whole leaf 5dpi 0.55 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
97 Cor 10h 0.63 >More info 0.46 >More info Mock 10h Cor Original data GEO bulk
98 Heat shock optimum 0.44 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
99 TA induced 0.57 >More info 0.52 >More info Methanol TA Suspension cells Original data GEO bulk
100 Leafminer damaged seedlings 0.52 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
101 35S:RPS4 eds1-2 24h -0.62 >More info -0.46 >More info 35S:RPS4 24h leaves Original data
102 WT NAA/flg 1h 0.65 >More info 0.43 >More info WT 0h Leaf tissue Original data GEO bulk
103 efr-1 +elf18 10h -0.64 >More info -0.44 >More info WT +elf18 10h elf18 Original data GEO bulk
104 pvip1 pvip2 0.59 >More info 0.49 >More info Col-0 whole rosettes Original data GEO bulk
105 AFB1 flg22 1h 0.65 >More info 0.43 >More info WT 0h Leaf tissue Original data GEO bulk
106 stn7-1 -0.65 >More info -0.42 >More info Col-0 rosette leaves Original data GEO bulk
107 Mutant siz1-3 0.54 >More info 0.53 >More info Col-0 Original data GEO bulk
108 penta Pst DC3000 12hpi 0.67 >More info 0.40 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
109 siz1-3 control 0.54 >More info 0.53 >More info Col-0 control Original data GEO bulk
110 vtc1 (II) 0.52 >More info 0.55 >More info Col (II) rosette Original data GEO bulk
111 Cor hrpS 10h 0.66 >More info 0.41 >More info Mock 10h Cor hrpS Original data GEO bulk
112 cpr5scv1 0.57 >More info 0.50 >More info WT(COL) Original data GEO bulk
113 WT leaves - Fe 0.69 >More info 0.38 >More info WT leaves + Fe Leaves Original data GEO bulk
114 mkk1/mkk2 control rep 0.59 >More info 0.48 >More info Col-0 Time 0 rep Original data GEO bulk
115 Col-0 (t-zeatin 3 h) -0.47 >More info -0.60 >More info Col-0 Original data Cytokinin treatment of seedlings
116 irradiated leaf (WT 1d) 0.71 >More info 0.35 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
117 9 hr Hypoxia 1 hr recovery Total RNA 0.61 >More info 0.45 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
118 HopZ1a treated 0.67 >More info 0.39 >More info col Original data GEO bulk
119 sfr6 drought -0.55 >More info -0.50 >More info WT drought All aerial tissue Original data GEO bulk
120 M6PR transgenic 0mM NaCl 0.59 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
121 GST NPP1 4 h (leaf) 0.62 >More info 0.43 >More info Mock 4 h (leaf) Original data Elicitor treatments
122 wnk8-2 untreated -0.48 >More info -0.57 >More info Col-0 untreated seedlings Original data GEO bulk
123 flu 0.69 >More info 0.35 >More info WT Col Original data GEO bulk
124 IAA/inhibitor A Treated 0.57 >More info 0.47 >More info IAA Treated Original data GEO bulk
125 Col-0 under 4 days salt 0.75 >More info 0.29 >More info Col-0 under control 4 days salt treatment rosette Original data
126 Atss3 Light4 -0.64 >More info -0.40 >More info Atss3 Dark0.5 Original data GEO bulk
127 Light 0.62 >More info 0.42 >More info Control Original data GEO bulk
128 SA 4mM 0.66 >More info 0.38 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
129 tbf1-mock infiltration -0.53 >More info -0.51 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
130 Protoplast Induced 0.36 >More info 0.68 >More info Uninduced Original data GEO bulk
131 CLO 4mM 0.70 >More info 0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
132 Col(gl) 0mM NaCl 0.56 >More info 0.47 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
133 WT 2-4h Xanthomonas 0.61 >More info 0.42 >More info WT T0 Original data GEO bulk
134 oas-a1.1 Cd 24h 0.61 >More info 0.42 >More info Cd 24h root Shoot Original data GEO bulk
135 Col(gl) leaf 0mM NaCl 0.56 >More info 0.47 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
136 coi1-16 ein2 sid2 ozone 0.72 >More info 0.31 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
137 nia1nia2 0.65 >More info 0.38 >More info Col-0 whole seedlings Original data GEO bulk
138 A. lyrata -0.55 >More info -0.48 >More info A. thaliana mature leaves before flowering Original data GEO bulk
139 Lipopolysaccaride4 h (leaf) 0.62 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
140 flu over-tAPX 0.65 >More info 0.38 >More info WT Col Original data GEO bulk
141 vtc2-1 -0.44 >More info -0.59 >More info Col-0 whole plant Original data GEO bulk
142 A6 mutant 0.45 >More info 0.58 >More info WT rosette leaves Rosette leaves Original data GEO bulk
143 Elevated CO2 fully expanded leaf 0.56 >More info 0.46 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
144 OsSAP11 expressing -0.52 >More info -0.50 >More info WT seedlings Original data GEO bulk
145 LTN008-2 aza-dc 0.65 >More info 0.37 >More info LTN012-2 Mock Original data
146 WT no Pi 0.58 >More info 0.44 >More info WT complete seedlings Original data
147 coi1-16 ein2 sid2 ctrl -0.70 >More info -0.32 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
148 Laer pretreat GA Flg22 1h 0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
149 WT 3H Cold 0.46 >More info 0.56 >More info WT control Original data GEO bulk
150 4C 1h 0.40 >More info 0.62 >More info 4C 0h Original data GEO bulk
151 coi1-2 0.55 >More info 0.46 >More info Col-0 mock Whole seedling Original data GEO bulk
152 myb61 xylem 0.53 >More info 0.48 >More info wt xylem xylem Original data GEO bulk
153 WT mitomycin C 0.66 >More info 0.35 >More info WT mock shoot apical meristem Original data
154 WT in -N 0.56 >More info 0.45 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
155 Light 3day wt -0.52 >More info -0.49 >More info 0h wt Original data
156 flu dark 8hours/30 minute light 0.34 >More info 0.67 >More info col dark 8hours/30 minute light Original data GEO bulk
157 wnk8-1 untreated -0.43 >More info -0.58 >More info Col-0 untreated seedlings Original data GEO bulk
158 max4 hypocotyl 0.48 >More info 0.53 >More info wt hypocotyl hypocotyl Original data GEO bulk
159 Dex-rga(delta17) 4h GA4 -0.48 >More info -0.53 >More info Vector 4h GA4 shoots Original data GEO bulk
160 BLM+INA 0.49 >More info 0.52 >More info CK BLM and INA seedling Original data
161 AvrRpt2 Col-0 6hpi 0.69 >More info 0.31 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
162 Te ozone 0.68 >More info 0.32 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
163 rdr6-11 ein5-1 ski2-3 0.56 >More info 0.44 >More info Col-0 aerial tissue Original data
164 WT AntimycinA 3h 0.63 >More info 0.37 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
165 ceh1 mutant 0.46 >More info 0.54 >More info Parent line Original data
166 camta3-1 0.56 >More info 0.43 >More info WT Original data GEO bulk
167 seedling 12h after HZE WT 0.52 >More info 0.47 >More info seedling day 1 unirradiated WT 12h Original data
168 Laer Flg22+GA 1h 0.65 >More info 0.34 >More info Laer Control leaf discs Original data GEO bulk
169 inhibitor A Treated 0.55 >More info 0.44 >More info Negative Control Original data GEO bulk
170 CAX1/CAX3 mutant 0.52 >More info 0.47 >More info Col whole plant Original data GEO bulk
171 Flagellin 4 h (leaf) 0.63 >More info 0.36 >More info Mock 4 h (leaf) Original data Elicitor treatments
172 upf3 0.55 >More info 0.44 >More info WT whole plant Original data GEO bulk
173 Homozygous-AtcesA4 -0.46 >More info -0.53 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
174 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.68 >More info 0.30 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
175 WT+H2O2 0.55 >More info 0.43 >More info WT H2O2 Original data GEO bulk
176 R. solani AG8 0.61 >More info 0.37 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
177 leaf blade in D 0.47 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
178 camta2/3 warm 0.52 >More info 0.45 >More info WT warm entire aerial part Original data GEO bulk
179 Col leaf 100mM NaCl 0.57 >More info 0.40 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
180 Col leaf 100mM NaCl 0.57 >More info 0.40 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
181 Roots Cd -0.52 >More info -0.45 >More info Roots control Cd Root Original data GEO bulk
182 Col 100mM NaCl 0.57 >More info 0.40 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
183 cpr5npr1 0.62 >More info 0.35 >More info WT(COL) Original data GEO bulk
184 HARAP hypoxic 0.52 >More info 0.45 >More info hypoxic hypoxia Original data GEO bulk
185 edr1 18 h powdery mildew 0.53 >More info 0.44 >More info Col-0 18 h powdery mildew Original data GEO bulk
186 cat2-long-day 2d -0.47 >More info -0.50 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
187 Rsch CA -0.56 >More info -0.40 >More info Col CA Leaves Original data
188 msh1 albino 0.51 >More info 0.45 >More info WT aerial part Original data GEO bulk
189 IXB induced 0.50 >More info 0.46 >More info Methanol IXB Suspension cells Original data GEO bulk
190 AgNO3 3 h 0.53 >More info 0.43 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
191 pho1 0.46 >More info 0.50 >More info Col2WT Original data GEO bulk
192 46T-Dry 0.43 >More info 0.53 >More info WT-Dry dehydration treatment 1h Original data
193 pmr4-1 powdery mildew 0.55 >More info 0.40 >More info WT powdery mildew uninoculated Original data GEO bulk
194 CMV-A2b mutant 0.64 >More info 0.31 >More info Mock-At Aerial tissues Original data GEO bulk
195 35S::ERF104 Flg22 4h 0.60 >More info 0.35 >More info 35S::ERF104 H2O 4h Original data GEO bulk
196 Kas-1 -Fe 24h -0.29 >More info -0.66 >More info Kas-1 +Fe 24h roots Original data GEO bulk
197 Kas -Fe 24h Roots -0.29 >More info -0.66 >More info Kas +Fe 24h Roots Original data GEO bulk
198 dorn1-1 Root 100 mM ATP 30 min -0.36 >More info -0.59 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
199 dcl1-7 0.50 >More info 0.44 >More info Ler Original data GEO bulk
200 toc1-1-57hr 0.53 >More info 0.41 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
201 SLWF infested 0.53 >More info 0.41 >More info SLWF uninfested rosette tissue Original data GEO bulk
202 oligomycin 4 h 0.56 >More info 0.37 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
203 npr1-3 MOCK 48h -0.55 >More info -0.38 >More info Col-0 MOCK 48h Original data GEO bulk
204 Col-0 ozone 0.68 >More info 0.25 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
205 GiantCell Root -0.40 >More info -0.53 >More info Control Root laser captured giant cells Original data GEO bulk
206 wrky33 Bc inoculation 14h 0.69 >More info 0.24 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
207 ein2-1 9 hpi A. brassicicola 0.64 >More info 0.29 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
208 WT cold 0.60 >More info 0.33 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
209 WT resupplied Pi 4h 0.58 >More info 0.35 >More info WT complete seedlings Original data
210 OE WRKY63.3 0.43 >More info 0.50 >More info OE WRKY40.4 none leaf Original data GEO bulk
211 9 hr Hypoxia IP RNA 0.56 >More info 0.36 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
212 miR393 flg22 2h 0.54 >More info 0.38 >More info WT 0h Leaf tissue Original data GEO bulk
213 csn5 (csn5a-2 csn5b) light 0.56 >More info 0.36 >More info WT light Original data GEO bulk
214 Bur-0-30min IAA 0.56 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
215 npr1-3 DCA 48h 0.38 >More info 0.54 >More info npr1-3 MOCK 48h Original data GEO bulk
216 hst5 0.50 >More info 0.42 >More info Col-0 Original data GEO bulk
217 AFB1 flg22 2h 0.62 >More info 0.30 >More info WT 0h Leaf tissue Original data GEO bulk
218 WT +Pep2 2h 0.57 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
219 nia1nia2noa1-2 0.60 >More info 0.32 >More info Col-0 whole seedlings Original data GEO bulk
220 SOS1 0mM NaCl 0.52 >More info 0.39 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
221 root Dosed gold 0.56 >More info 0.35 >More info root No gold .125 mM gold 24 h roots Original data
222 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.67 >More info 0.24 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
223 0.125 mM gold 24 h 0.56 >More info 0.35 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
224 WT drought 0.40 >More info 0.51 >More info WT control All aerial tissue Original data GEO bulk
225 NJ15 0.35 >More info 0.56 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
226 WT +elf18 10h 0.58 >More info 0.33 >More info WT untreated elf18 Original data GEO bulk
227 D2O 0.59 >More info 0.32 >More info H2O seedling Original data GEO bulk
228 CT101 ozone 0.63 >More info 0.27 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
229 leaf rlt1-1rlt2-1 -0.55 >More info -0.35 >More info leaf Col-0 leaf Original data GEO bulk
230 pap1-D 0.50 >More info 0.40 >More info Col-0 aerial part Original data
231 Col-0-3h IAA 0.63 >More info 0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
232 edr1 36 h powdery mildew 0.50 >More info 0.40 >More info Col-0 36 h powdery mildew Original data GEO bulk
233 INA 0.38 >More info 0.52 >More info CK INA seedling Original data
234 Elevated CO2 leaf primordia 0.35 >More info 0.55 >More info Ambient CO2 leaf primordia leaf primordia Original data
235 Chitosan 3h Treatment 0.55 >More info 0.34 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
236 P.p 2.5hai 0.52 >More info 0.37 >More info At-Control roots Original data GEO bulk
237 Elevated CO2 expanding leaf 0.53 >More info 0.36 >More info Ambient CO2 expanding leaf expanding leaf Original data
238 Bur-0-1h IAA 0.61 >More info 0.28 >More info Bur-0h IAA whole plant Original data GEO bulk
239 eds16 whole leaf 3dpi -0.39 >More info -0.50 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
240 pmr4-1 control 0.39 >More info 0.50 >More info WT control uninoculated Original data GEO bulk
241 mpk6-ko Flg22 4h 0.57 >More info 0.32 >More info mpk6-ko H2O 4h Original data GEO bulk
242 NahG -0.32 >More info -0.57 >More info Col-0 Leaves Original data GEO bulk
243 WT seedlings MV 0.54 >More info 0.34 >More info WT seedlings control Seedlings Original data GEO bulk
244 miR 0h 0.34 >More info 0.54 >More info Col 0h Leaf Original data GEO bulk
245 Phaseolicola 2 h (leaf) 0.60 >More info 0.28 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
246 mkk2 24h BTH rep 0.60 >More info 0.28 >More info Col-0 24h BTH rep Original data GEO bulk
247 cat2-hCO2 -0.61 >More info -0.27 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
248 Bur-0-3h IAA 0.52 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
249 atmospheric CO2 low Mg shoot 0.62 >More info 0.26 >More info atmospheric CO2 normal Mg shoot Shoot Original data
250 Primisulfuron EC50 0.57 >More info 0.31 >More info Carrier (primisulfuron) Original data GEO bulk
251 8hr-pH4.5 0.54 >More info 0.33 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
252 bak1-3 +Pep2 10h 0.55 >More info 0.32 >More info WT +Pep2 10h Pep2 Original data GEO bulk
253 C24 ozone 0.68 >More info 0.19 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
254 eds16 whole leaf 7dpi -0.34 >More info -0.53 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
255 Col whole leaf 1dpi -0.33 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
256 Laer Flg22 1h 0.62 >More info 0.25 >More info Laer Control leaf discs Original data GEO bulk
257 seedlings +5AC 0.62 >More info 0.25 >More info control seedlings 10-day old whole seedling Original data GEO bulk
258 HSP90 Reduced RNAi-A2 0.50 >More info 0.37 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
259 atmospheric CO2 high Mg shoot 0.59 >More info 0.27 >More info atmospheric CO2 normal Mg shoot Shoot Original data
260 Nicotinamide-57hr 0.62 >More info 0.24 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
261 CDB1-Knockout -0.24 >More info -0.62 >More info WT Original data GEO bulk
262 toc1-1-49hr 0.51 >More info 0.34 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
263 gai Flg22 1h -0.51 >More info -0.34 >More info Laer Flg22 1h leaf discs Original data GEO bulk
264 ppi2 0.55 >More info 0.30 >More info WT whole plant Original data GEO bulk
265 9m.KCl 0.51 >More info 0.34 >More info To. KCl 14 day old Roots Original data GEO bulk
266 WT 6H Cold 0.54 >More info 0.31 >More info WT control Original data GEO bulk
267 Col-0-avrB-6h 0.53 >More info 0.32 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
268 IMI 4mM 0.67 >More info 0.18 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
269 12m.KCl 0.32 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
270 toc1-1-65hr 0.61 >More info 0.24 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
271 Ws 100mM NaCl 0.50 >More info 0.35 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
272 Ws leaf 100mM NaCl 0.50 >More info 0.35 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
273 35:SUB1A 0.60 >More info 0.25 >More info WT whole seedling Original data GEO bulk
274 Sulfometuron EC50 0.60 >More info 0.25 >More info Carrier Original data GEO bulk
275 wavy 0.35 >More info 0.50 >More info WT Original data GEO bulk
276 gh3.5-1D 48 hpi 0.53 >More info 0.31 >More info Col-0 uninoculated Original data GEO bulk
277 GO5; 8h switch to ambient CO2 concentrations; 0.51 >More info 0.33 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
278 ice1 control 0.59 >More info 0.25 >More info WT control Original data GEO bulk
279 Nicotinamide-81hr 0.60 >More info 0.24 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
280 DFPM 0.59 >More info 0.25 >More info control Original data GEO bulk
281 Col-0-1h IAA 0.65 >More info 0.18 >More info Col-0-0h IAA whole plant Original data GEO bulk
282 bio4-1 mutant watered00µM biotin leaves -0.66 >More info -0.17 >More info bio4-1 mutant leaves leaves Original data GEO bulk
283 Octopus overexpressor 35SDYG25 0.31 >More info 0.52 >More info WS Original data GEO bulk
284 total mRNA eif3k 0.32 >More info 0.51 >More info total mRNA WT aerial part Original data GEO bulk
285 opr3 OPDA 0.5 h 0.19 >More info 0.64 >More info opr3 0 h Original data GEO bulk
286 IRP1-OE-Fe--shoot 0.58 >More info 0.25 >More info COL-0-Fe--shoot shoot Original data
287 Mutant cry1 (High Light) -0.50 >More info -0.32 >More info Col-0 (High Light) Original data GEO bulk
288 psae1-3 stn7-1 0.51 >More info 0.31 >More info WS rosette leaves Original data GEO bulk
289 CMP 4hr 0.54 >More info 0.28 >More info Acetone 4hr root Original data GEO bulk
290 C24 UV1 -0.52 >More info -0.30 >More info C24 mock UV seedling Original data
291 cry1 high light -0.50 >More info -0.32 >More info Col-O high light Original data GEO bulk
292 Nicotinamide-53hr 0.58 >More info 0.24 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
293 calcicole ecotype Cal-0 0.66 >More info 0.15 >More info Col-4 1 mM CaCl2 Original data GEO bulk
294 penta MeJA 1h 0.65 >More info 0.16 >More info Laer MeJA 1h leaf discs Original data GEO bulk
295 hrcC 0.56 >More info 0.25 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
296 Col-0-30min IAA 0.58 >More info 0.23 >More info Col-0-0h IAA whole plant Original data GEO bulk
297 seedling 24h after HZE WT 0.60 >More info 0.20 >More info seedling day 2 unirradiated WT 24h Original data
298 col-5 hrpA 12h 0.50 >More info 0.30 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
299 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.64 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
300 penta Alternaria 3dpi 0.53 >More info 0.27 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
301 Atwrky63 -0.51 >More info -0.28 >More info Col0 none leaf Original data GEO bulk
302 Triazolopyrimidine EC50 0.52 >More info 0.27 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
303 arf2 brz -0.55 >More info -0.24 >More info arf2 mock Original data GEO bulk
304 Col-0 9 hpi A. brassicicola 0.54 >More info 0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
305 HopZ1a treated ulp1c ulp1d 0.50 >More info 0.28 >More info col Original data GEO bulk
306 Col-0 SA 0.51 >More info 0.27 >More info Col-0 Original data GEO bulk
307 Col-0 WT HL 3h 0.51 >More info 0.26 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
308 pad4-PsmES4326-24hpi -0.53 >More info -0.24 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
309 atgsnor1-1 -0.50 >More info -0.27 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
310 atr mock 0.50 >More info 0.27 >More info WT mock shoot apical meristem Original data
311 siliques AtHb1 control 0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
312 WT zebularine 0.55 >More info 0.20 >More info WT mock shoot apical meristem Original data
313 Mutant gh3.5-1D (AvrRpt2) 0.50 >More info 0.25 >More info Col-0 (AvrRpt2) Original data GEO bulk
314 WT NAA/flg 2h 0.54 >More info 0.20 >More info WT 0h Leaf tissue Original data GEO bulk
315 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
316 Col-0 INA 6d 0.24 >More info 0.50 >More info Col-0 MOCK 6d Original data GEO bulk
317 phyB mutant 22C 10hrs -0.12 >More info -0.62 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
318 E.coli TUV86 2 fliC 7h 0.52 >More info 0.21 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
319 Imbibed 1 h (seed) 0.10 >More info 0.63 >More info Dry seed Original data Time course of early seed germination
320 WT Bc inoculation 14h 0.59 >More info 0.13 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
321 dde2-2 9 hpi A. brassicicola 0.53 >More info 0.19 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
322 Pst-DC3000(avrRpm1)-4hpi 0.54 >More info 0.18 >More info Pst-DC3000-4hpi Original data GEO bulk
323 eds16 whole leaf 1dpi -0.19 >More info -0.53 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
324 Whole root - low pH 3H 0.20 >More info 0.52 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
325 Leafminer locally damaged thaliana seedlings 0.52 >More info 0.19 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
326 Laer GA 1h 0.20 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
327 FLIGHT TAGESB plate6 SHOOTS 0.54 >More info 0.16 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
328 swn-7 -0.54 >More info -0.16 >More info Col whole plant Original data GEO bulk
329 Laer Flg22+GA 2h 0.51 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
330 Mutant lwd1_lwd2 0.56 >More info 0.13 >More info Wildtype for phy mutants Original data GEO bulk
331 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.56 >More info 0.13 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
332 E.coli 0157 H7 7h 0.56 >More info 0.13 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
333 UV 0.50 >More info 0.19 >More info WT aerial region Original data GEO bulk
334 P35S:rGRF3 0.51 >More info 0.18 >More info WS Original data GEO bulk
335 OE WRKY40.4 -0.53 >More info -0.15 >More info OE WRKY40.4 none leaf Original data GEO bulk
336 bak1-3 +Pep2 2h 0.17 >More info 0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
337 spx1 spx2 complete 0.50 >More info 0.18 >More info WT complete seedlings Original data
338 vte2 leaves 48h LT 0.61 >More info 0.07 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
339 FarRed Light 45min 0.02 >More info -0.70 >More info White Light 45min Original data Light treatments
340 CCA14 dark late -0.15 >More info -0.52 >More info Col dark late Original data GEO bulk
341 epiF3 -0.57 >More info -0.10 >More info WT Col-0 aerial part Original data
342 spx1 spx2 no Pi 0.55 >More info 0.11 >More info WT no Pi seedlings Original data
343 ataf1-1 mutant Col-0 Un-inoculated -0.53 >More info -0.12 >More info WT Col-0 Un-inoculated Original data GEO bulk
344 Cor 24h 0.53 >More info 0.12 >More info Mock 24h Cor Original data GEO bulk
345 rao2 H2O2 3h -0.52 >More info -0.13 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
346 ex1 flu dark 8hours/30 minute light 0.09 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
347 46T-CK 0.05 >More info 0.60 >More info WT-CK none Original data
348 toc1-1-77hr 0.59 >More info 0.06 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
349 toc1-1-53hr 0.54 >More info 0.09 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
350 HairpinZ 4 h (leaf) 0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
351 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
352 high R/FR JA spray -0.50 >More info -0.11 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
353 Bay-0-30min IAA 0.57 >More info 0.02 >More info Bay-0-0h IAA whole plant Original data GEO bulk
354 Light 0.5h steady-state 0.08 >More info 0.51 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
355 nas4x leaves + Fe 0.61 >More info -0.04 >More info WT leaves + Fe Leaves Original data GEO bulk
356 col-5 hrpA 2h 0.50 >More info 0.06 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
357 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
358 sta1 0.60 >More info -0.06 >More info WT Original data GEO bulk
359 35:SUB1C 0.59 >More info -0.06 >More info WT whole seedling Original data GEO bulk
360 Laer pretreat GA Flg22 0h 0.51 >More info 0.02 >More info Laer pretreat water control leaf discs Original data GEO bulk
361 desiccated mature pollen grains 0.03 >More info -0.56 >More info hydrated pollen grains Original data GEO bulk
362 Col PSTDC3000 24h 0.65 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
363 pvip1 pvip2 seedling 0.54 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
364 Laer pretreat JA Flg22 0h 0.00 >More info -0.52 >More info Laer pretreat water control leaf discs Original data GEO bulk
365 toc1-1-61hr 0.52 >More info -0.02 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
366 whole roots -Fe 6 hour -0.00 >More info 0.50 >More info whole roots standard Original data GEO bulk
367 Shoot P recovery 0.57 >More info -0.09 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
368 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
369 Light 3day hml -0.54 >More info 0.08 >More info 0h hml Original data
370 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
371 P. infestans 6 h (leaf) 0.57 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
372 Red/FR Light45min -0.10 >More info 0.50 >More info FarRed Light 45min Original data Light treatments
373 WT NAA 1h 0.50 >More info -0.26 >More info WT 0h Leaf tissue Original data GEO bulk
374 SA 24h -0.31 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk