4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT NAA 2h
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List of experiments correlated with "WT NAA 2h"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT NAA 2h		 Correlation to
WT NAA 2h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT NAA 2h 1.00 >More info 1.00 >More info WT 0h Leaf tissue Original data GEO bulk
2 WT NAA 1h 0.81 >More info 0.81 >More info WT 0h Leaf tissue Original data GEO bulk
3 IAA 1 h 0.82 >More info 0.75 >More info Mock 1 h Original data Basic hormone treatment of seedlings
4 GR-bdl DEX IAA -0.80 >More info -0.73 >More info GR-bdl IAA Original data GEO bulk
5 IAA 0.5 h 0.81 >More info 0.71 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
6 FarRed Light 45min 0.62 >More info 0.85 >More info White Light 45min Original data Light treatments
7 IAA Treated 0.80 >More info 0.62 >More info Negative Control Original data GEO bulk
8 WT NAA/flg 2h 0.83 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
9 IAA 3 h 0.81 >More info 0.59 >More info Mock 3 h Original data Basic hormone treatment of seedlings
10 Col-0 shade 0.81 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
11 low R/FR mock spray 0.82 >More info 0.57 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
12 Bay-0-1h IAA 0.79 >More info 0.55 >More info Bay-0-0h IAA whole plant Original data GEO bulk
13 sav3-2 shade -0.76 >More info -0.58 >More info Col-0 shade seedlings Original data GEO bulk
14 Mutant sav3-2 (SH) -0.76 >More info -0.58 >More info Col-0 (SH) Original data GEO bulk
15 petiole in FRD 0.81 >More info 0.52 >More info petiole in WL petioles Original data GEO bulk
16 C24-1h IAA 0.81 >More info 0.51 >More info C24-0h IAA whole plant Original data GEO bulk
17 essp4/sdg8-5 mutant -0.73 >More info -0.59 >More info wild type leaf Original data GEO bulk
18 Fei-0-1h IAA 0.79 >More info 0.51 >More info Fei-0-0h IAA whole plant Original data GEO bulk
19 swn-7 0.70 >More info 0.60 >More info Col whole plant Original data GEO bulk
20 Col-0 low R/FR 0.82 >More info 0.46 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
21 Mutant iaa5_6_19 -0.77 >More info -0.51 >More info Col Original data GEO bulk
22 Mutant nph4-1_arf19-1 (IAA) -0.80 >More info -0.47 >More info Col (IAA) Original data GEO bulk
23 Col-O high light -0.77 >More info -0.50 >More info Col-O bule light Original data GEO bulk
24 Mutant nph4-1 (IAA) -0.78 >More info -0.48 >More info Col (IAA) Original data GEO bulk
25 sdg8-2 mutant -0.67 >More info -0.59 >More info wild type leaf Original data GEO bulk
26 Sha-1h IAA 0.82 >More info 0.43 >More info Sha-0h IAA whole plant Original data GEO bulk
27 IAA 1h 0.63 >More info 0.61 >More info control 1h root Original data GEO bulk
28 Bay-0-3h IAA 0.80 >More info 0.43 >More info Bay-0-0h IAA whole plant Original data GEO bulk
29 WT hypoxia 0.73 >More info 0.50 >More info WT normoxia whole rosette Original data
30 Sha-30min IAA 0.77 >More info 0.46 >More info Sha-0h IAA whole plant Original data GEO bulk
31 WT Atum 2h 0.32 >More info 0.90 >More info WT 0h Leaf tissue Original data GEO bulk
32 Night Time Treatment -0.55 >More info -0.66 >More info Night Time Control 1hr white light pulse aerial rosette Original data
33 Light 0.5h steady-state -0.69 >More info -0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
34 FarRed Light 4 h -0.61 >More info -0.59 >More info White Light 4 h Original data Light treatments
35 Red/FR Light45min -0.39 >More info -0.79 >More info FarRed Light 45min Original data Light treatments
36 GV3101 3hpi 0.50 >More info 0.67 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
37 HARAP aerobic -0.66 >More info -0.50 >More info WT aerobic aerobic Original data GEO bulk
38 Mutant nph4-1 -0.68 >More info -0.48 >More info Col Original data GEO bulk
39 leaf blade in FRD 0.68 >More info 0.48 >More info leaf blade in WL leaf blades Original data GEO bulk
40 Shoot -Cs -0.69 >More info -0.47 >More info Control-shoot Original data GEO bulk
41 Fei-0-30min IAA 0.72 >More info 0.44 >More info Fei-0-0h IAA whole plant Original data GEO bulk
42 Col-0 +ABA LF -0.63 >More info -0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
43 Light 0.5h polysome-bound -0.66 >More info -0.49 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
44 Bay-0-30min IAA 0.72 >More info 0.43 >More info Bay-0-0h IAA whole plant Original data GEO bulk
45 Heat no recovery -0.68 >More info -0.47 >More info Mock no recovery seedling Original data GEO bulk
46 Col-0 DEX Shade 0.77 >More info 0.38 >More info Col-0 DEX WL seedlings Original data
47 C24-30min IAA 0.74 >More info 0.40 >More info C24-0h IAA whole plant Original data GEO bulk
48 Chemically 0.75 >More info 0.39 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
49 IAA 0.5h 0.66 >More info 0.47 >More info control 0.5h root Original data GEO bulk
50 Blue Light 4 h -0.50 >More info -0.63 >More info White Light 4 h Original data Light treatments
51 C58 3hpi 0.54 >More info 0.59 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
52 pip3 At2g19270 RNAi 32 -0.67 >More info -0.45 >More info Nd-1 whole plant Original data GEO bulk
53 35S:LOB-GR DEX -0.75 >More info -0.37 >More info Col DEX dexamethasone seedling Original data GEO bulk
54 long 12-degree- -0.53 >More info -0.59 >More info control long Original data GEO bulk
55 low R/FR JA spray 0.62 >More info 0.50 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
56 35S-MIF1 dark grown -0.75 >More info -0.37 >More info Dark-grown WT control Original data GEO bulk
57 24h volatiles Sm. R3089 0.63 >More info 0.49 >More info 24h untreated whole seedling Original data GEO bulk
58 AVG 3 h -0.66 >More info -0.46 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
59 Bur-0-1h IAA 0.80 >More info 0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
60 Col-0 DCA 6d 0.55 >More info 0.55 >More info Col-0 MOCK 6d Original data GEO bulk
61 Sha-3h IAA 0.80 >More info 0.30 >More info Sha-0h IAA whole plant Original data GEO bulk
62 C24-3h IAA 0.80 >More info 0.30 >More info C24-0h IAA whole plant Original data GEO bulk
63 Red/FR Light 4 h 0.60 >More info 0.49 >More info FarRed Light 4 h Original data Light treatments
64 Shoot dark control 7h 0.51 >More info 0.58 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
65 PIF5ox low R/FR -0.76 >More info -0.32 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
66 ein2-1 untreated -0.60 >More info -0.48 >More info WT untreated untreated Original data GEO bulk
67 Red Light 45min 0.52 >More info 0.56 >More info White Light 45min Original data Light treatments
68 3x(m) 0.41 >More info 0.66 >More info 2x two week old seedlings Original data
69 max3GR24 (1 uM) -0.47 >More info -0.60 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
70 Laer GA 1h -0.43 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
71 pip3 At2g19270 RNAi 24 -0.48 >More info -0.56 >More info Nd-1 whole plant Original data GEO bulk
72 HS -0.66 >More info -0.37 >More info noneHS Original data GEO bulk
73 NJ15 -0.32 >More info -0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
74 BI-1-1h IAA 0.81 >More info 0.21 >More info BI-1-0h IAA whole plant Original data GEO bulk
75 columella auxin 0.64 >More info 0.38 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
76 60m light -0.44 >More info -0.58 >More info before light whole seedlings Original data GEO bulk
77 pericycle auxin 0.60 >More info 0.41 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
78 Mutant axr3-1 -0.79 >More info -0.22 >More info Col Original data GEO bulk
79 PAHs stress -0.69 >More info -0.32 >More info exp control phenanthrene whole plants Original data GEO bulk
80 WT seedlings IAA 0.66 >More info 0.35 >More info WT seedlings control Seedlings Original data GEO bulk
81 Mutant iaa17-6 -0.80 >More info -0.20 >More info Col Original data GEO bulk
82 pab polysome -0.54 >More info -0.46 >More info WT polysome seedling shoot/aerial seedling Original data
83 lht1 untreated -0.53 >More info -0.47 >More info WT untreated untreated leaf Original data GEO bulk
84 low water potential -0.64 >More info -0.36 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
85 B.cinerea 18 h infection -0.57 >More info -0.43 >More info Mock 18 h Original data Botrytis cinerea infection
86 Botrytis cinerea 18h -0.57 >More info -0.43 >More info control 18h Original data GEO bulk
87 Botrytis cinerea 48h -0.52 >More info -0.47 >More info control 48h Original data GEO bulk
88 MIL4 ox 0.66 >More info 0.33 >More info Col Original data GEO bulk
89 Shoot -K -0.70 >More info -0.29 >More info Control-shoot Original data GEO bulk
90 K starvation (shoot) -0.70 >More info -0.29 >More info Ws (shoot) Original data GEO bulk
91 COL-0-Fe--shoot -0.46 >More info -0.53 >More info COL-0-Ctrl--shoot shoot Original data
92 ALC Toc1 light-dark Mock -0.70 >More info -0.28 >More info Col light-dark Mock no ethanol Original data GEO bulk
93 ein3 eil1 -0.50 >More info -0.48 >More info Col-0 mock Whole seedling Original data GEO bulk
94 35S:LOB-GR mock -0.58 >More info -0.40 >More info Col mock mock seedling Original data GEO bulk
95 DC3000 24h -0.54 >More info -0.44 >More info Mock 24h DC3000 Original data GEO bulk
96 35S:VND7-VP16-GR+CHX -0.28 >More info -0.70 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
97 Day Time Treatment -0.46 >More info -0.52 >More info Day Time Control 1hr white light pulse aerial rosette Original data
98 FAMA induced 48h -0.66 >More info -0.30 >More info control 48h Whole seedling Original data GEO bulk
99 Col-0 Mock Shade 0.74 >More info 0.22 >More info Col-0 Mock WL seedlings Original data
100 IAA 2h 0.64 >More info 0.32 >More info control 2h root Original data GEO bulk
101 pif5 high R/FR -0.61 >More info -0.35 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
102 rosette Dark Wounded -0.45 >More info -0.51 >More info rosette Dark Control Original data GEO bulk
103 Mutant gh3.5-1D -0.67 >More info -0.28 >More info Col-0 Original data GEO bulk
104 30m light -0.40 >More info -0.55 >More info before light whole seedlings Original data GEO bulk
105 Col-0 5dpi -0.69 >More info -0.26 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
106 Mutant nph4-1_arf19-1 -0.58 >More info -0.37 >More info Col Original data GEO bulk
107 Col-0-1h IAA 0.76 >More info 0.19 >More info Col-0-0h IAA whole plant Original data GEO bulk
108 CCA14 dark late 0.70 >More info 0.25 >More info Col dark late Original data GEO bulk
109 Mutant arf19-1 -0.63 >More info -0.32 >More info Col Original data GEO bulk
110 cca1-lhy before light 0.54 >More info 0.41 >More info before light whole seedlings Original data GEO bulk
111 safener treated -0.69 >More info -0.25 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
112 Leaf 0.35 >More info 0.59 >More info Control for tissue data leaf Original data GEO bulk
113 csn3-1 light -0.66 >More info -0.27 >More info WT light Original data GEO bulk
114 IRP1-OE-Ctrl--shoot -0.68 >More info -0.25 >More info COL-0-Ctrl--shoot shoot Original data
115 hsfa2 KO -0.61 >More info -0.32 >More info WT (Col-0) whole seedling Original data GEO bulk
116 Mutant gh3.5-1D (AvrRpt2) -0.64 >More info -0.29 >More info Col-0 (AvrRpt2) Original data GEO bulk
117 cca1-lhy 30m light 0.42 >More info 0.51 >More info 30m light whole seedlings Original data GEO bulk
118 WT Na2S -0.29 >More info -0.64 >More info WT water Na2S leaf Original data GEO bulk
119 rosettes myoox drought -0.53 >More info -0.39 >More info rosettes myoox watered Original data GEO bulk
120 Col-0 mbs1-1 HL 3h -0.52 >More info -0.40 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
121 Shoot submergence 24h 0.36 >More info 0.56 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
122 E.orontii Infection 3 day 0.71 >More info 0.21 >More info Uninfection 3 day Original data Elicitor treatments
123 pip3 At2g19270 TDNA 6h-1 -0.60 >More info -0.32 >More info Col-0 whole plant Original data GEO bulk
124 Fei-0-3h IAA 0.71 >More info 0.21 >More info Fei-0-0h IAA whole plant Original data GEO bulk
125 Dark 6h wt 0.50 >More info 0.42 >More info 0h wt Original data
126 Laer pretreat JA Flg22 0h -0.30 >More info -0.62 >More info Laer pretreat water control leaf discs Original data GEO bulk
127 Emwa1 inoculated psk 3 dpi 0.35 >More info 0.57 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
128 aerial organ callus inducing medium 12 h 0.52 >More info 0.39 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
129 Dark 6h hml 0.51 >More info 0.40 >More info 0h hml Original data
130 Laer pretreat GA Flg22 1h 0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
131 Salt Stress 24 h (shoot) -0.63 >More info -0.27 >More info Stress mock 24 h (shoot) Original data Stress treatments
132 intact root auxin 0.76 >More info 0.14 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
133 Fenclorim 24hr -0.55 >More info -0.35 >More info Acetone 24hr root Original data GEO bulk
134 oas-a1.1 Cd 24h -0.67 >More info -0.23 >More info Cd 24h root Shoot Original data GEO bulk
135 ga1-3/brm-1 -0.64 >More info -0.26 >More info wt shoots Original data GEO bulk
136 epidermis auxin 0.62 >More info 0.28 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
137 C2 leaf-drought -0.54 >More info -0.36 >More info C2 leaf-well watered Original data GEO bulk
138 35S::PI ap3-3 35S::AP-GR +DEX -0.25 >More info -0.65 >More info 0hr DEX Original data GEO bulk
139 seedling 24h after Gamma atm-1 -0.38 >More info -0.52 >More info seedling day 2 unirradiated atm-1 24h Original data
140 rao2 H2O2 3h 0.58 >More info 0.32 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
141 WT leaf-drought -0.53 >More info -0.36 >More info WT leaf-well watered Original data GEO bulk
142 Mutant arf2-6 (IAA) 0.62 >More info 0.27 >More info Col (IAA) Original data GEO bulk
143 amiRAP aerobic -0.53 >More info -0.36 >More info WT aerobic aerobic Original data GEO bulk
144 Col whole leaf 6hpi -0.54 >More info -0.35 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
145 lht1 PstDC3000 48h -0.51 >More info -0.38 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
146 nas4x leaves + Fe 0.51 >More info 0.38 >More info WT leaves + Fe Leaves Original data GEO bulk
147 ein2-1 24hpi A. brassicicola -0.29 >More info -0.60 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
148 downy mildew cotyledons early stage -0.54 >More info -0.34 >More info mock inoculated Cotyledons Original data GEO bulk
149 cop1 Seedling BL+ABA -0.52 >More info -0.36 >More info WT Seedling BL+ABA Original data GEO bulk
150 35S::KLU -0.63 >More info -0.25 >More info WT Shoot Original data
151 tunicamycin -0.58 >More info -0.30 >More info DMF Original data GEO bulk
152 amiR-tor induced 3d -0.31 >More info -0.57 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
153 Dark 40 min pls UV-A 5 min -0.55 >More info -0.32 >More info Dark 45 min Original data Light treatments
154 Bur-0-30min IAA 0.68 >More info 0.19 >More info Bur-0h IAA whole plant Original data GEO bulk
155 pif4pif5 high R/FR -0.64 >More info -0.23 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
156 npr1 sni1 brca2a -0.59 >More info -0.28 >More info npr1 sni1 water water seedling Original data GEO bulk
157 T6 leaf-drought -0.52 >More info -0.35 >More info T6 leaf-well watered Original data GEO bulk
158 MYB12OX/tt4 0.50 >More info 0.37 >More info Col-0 aerial part Original data
159 WT salt 12 h -0.52 >More info -0.34 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
160 Mature callus -0.63 >More info -0.23 >More info Young callus hypocotyls Original data GEO bulk
161 Fenclorim 4hr -0.51 >More info -0.35 >More info Acetone 4hr root Original data GEO bulk
162 atgsnor1-1 0.35 >More info 0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
163 Brz220 3 h -0.59 >More info -0.26 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
164 brm-1 -0.64 >More info -0.21 >More info wt shoots Original data GEO bulk
165 roots IAA 0.62 >More info 0.23 >More info roots mock Original data GEO bulk
166 Light 4h polysome-bound -0.50 >More info -0.34 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
167 ABA 3 h -0.51 >More info -0.33 >More info Mock 3 h Original data Basic hormone treatment of seedlings
168 ein2 1% sucrose 14-day-old -0.31 >More info -0.53 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
169 Col-0-30min IAA 0.70 >More info 0.14 >More info Col-0-0h IAA whole plant Original data GEO bulk
170 IAA 4h 0.62 >More info 0.22 >More info control 4h root Original data GEO bulk
171 eds16 whole leaf 0h UI -0.61 >More info -0.23 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
172 csn5 (csn5a-2 csn5b) light -0.59 >More info -0.25 >More info WT light Original data GEO bulk
173 A2hsfa1-ox in quadruple mutant -0.31 >More info -0.52 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
174 AmGSTF1 expressor 0.26 >More info 0.57 >More info WT leaf tissue Original data GEO bulk
175 dTLEc systemic wounding 0.53 >More info 0.29 >More info wt systemic wounding leaves Original data GEO bulk
176 sav3-2 light -0.68 >More info -0.14 >More info Col-0 light seedlings Original data GEO bulk
177 WT Shoot-Pi -0.50 >More info -0.32 >More info WT Shoot+Pi shoots Original data GEO bulk
178 CMP 24hr -0.51 >More info -0.31 >More info Acetone 24hr root Original data GEO bulk
179 Mutant sav3-2 (WL) -0.68 >More info -0.14 >More info Col-0 (WL) Original data GEO bulk
180 cat2-2; 8h switch to ambient CO2 concentrations; -0.24 >More info -0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
181 pmr4-1 control -0.52 >More info -0.28 >More info WT control uninoculated Original data GEO bulk
182 stele auxin 0.60 >More info 0.20 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
183 pskr1-5 0.27 >More info 0.53 >More info wild type Cotyledons Original data GEO bulk
184 AvrRpt2 Col-0 6hpi -0.57 >More info -0.23 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
185 Total RNA csp1 cold 0.55 >More info 0.24 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
186 BI-1-3h IAA 0.72 >More info 0.07 >More info BI-1-0h IAA whole plant Original data GEO bulk
187 ASL9-ox 0.60 >More info 0.19 >More info WT aerial parts of seedlings Original data GEO bulk
188 wnk8-3 untreated 0.53 >More info 0.25 >More info Col-0 untreated seedlings Original data GEO bulk
189 IRP1-OE-Fe--shoot -0.65 >More info -0.13 >More info COL-0-Fe--shoot shoot Original data
190 Bur-0-3h IAA 0.55 >More info 0.23 >More info Bur-0h IAA whole plant Original data GEO bulk
191 aox1a(line) MLD stressed -0.65 >More info -0.13 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
192 WT Atum 1h 0.13 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
193 Osmotic Stress 24 h (shoot) -0.64 >More info -0.13 >More info Stress mock 24 h (shoot) Original data Stress treatments
194 inhibitor A Treated -0.54 >More info -0.23 >More info Negative Control Original data GEO bulk
195 Col-0 SA -0.55 >More info -0.22 >More info Col-0 Original data GEO bulk
196 WT Shoot Hypoxia -0.67 >More info -0.10 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
197 ice1 control -0.55 >More info -0.21 >More info WT control Original data GEO bulk
198 GR:KAN1 DEX WL -0.65 >More info -0.11 >More info GR:KAN1 Mock WL seedlings Original data
199 SPT4-R3 seedlings0 DAS -0.64 >More info -0.12 >More info Col-0 seedlings0 DAS seedlings Original data
200 Col-7 Sucrose -0.52 >More info -0.24 >More info col-7 Original data GEO bulk
201 Cd 24h root 0.63 >More info 0.13 >More info WT-Untreated Shoot Original data GEO bulk
202 Leaf GLU1-KO -0.63 >More info -0.12 >More info Leaf Col(0) rosette leaves Original data GEO bulk
203 Mutant cry1 0.64 >More info 0.11 >More info Col-0 Original data GEO bulk
204 clf-28 swn-7 -0.52 >More info -0.23 >More info Col whole plant Original data GEO bulk
205 atm3 0.50 >More info 0.25 >More info Col0 whole plant Original data GEO bulk
206 cry1 low light 0.64 >More info 0.11 >More info Col-O low light Original data GEO bulk
207 ms35 silique stage 7 0.17 >More info 0.58 >More info Ler 6.7 anther and filament Original data GEO bulk
208 IAA 8h 0.56 >More info 0.18 >More info control 8h root Original data GEO bulk
209 RRE1 Chitin -0.56 >More info -0.18 >More info Chitin Original data GEO bulk
210 AtMYB30-ox 2-4h Xanthomonas -0.56 >More info -0.18 >More info WT 2-4h Xanthomonas Original data GEO bulk
211 GR:KAN1 DEX Shade -0.69 >More info -0.05 >More info GR:KAN1 Mock Shade seedlings Original data
212 coi1 -0.55 >More info -0.19 >More info Col-0 Leaves Original data GEO bulk
213 WT powdery mildew -0.55 >More info -0.19 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
214 Col BTH 0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
215 BI-1-30min IAA 0.65 >More info 0.08 >More info BI-1-0h IAA whole plant Original data GEO bulk
216 gh3.5-1D 48 hpi -0.62 >More info -0.11 >More info Col-0 uninoculated Original data GEO bulk
217 WT NAA/flg 1h 0.59 >More info 0.14 >More info WT 0h Leaf tissue Original data GEO bulk
218 Dark 44min pls RedLigh 1min -0.51 >More info -0.22 >More info Dark 45 min Original data Light treatments
219 WT resupplied Pi 4h -0.55 >More info -0.17 >More info WT complete seedlings Original data
220 DC3000 hrcC 2 h (leaf) 0.56 >More info 0.16 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
221 Distal half (leaf7) 0.17 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
222 Glyphosate EC50 -0.63 >More info -0.09 >More info Carrier (Glyphosate) Original data GEO bulk
223 PRR5-VP 6h light on -0.58 >More info -0.14 >More info WT 6h light on whole plant Original data GEO bulk
224 Col-0 DCA 48h -0.70 >More info -0.02 >More info Col-0 MOCK 48h Original data GEO bulk
225 RRE2 -0.54 >More info -0.18 >More info Col C Original data GEO bulk
226 15m light -0.18 >More info -0.54 >More info before light whole seedlings Original data GEO bulk
227 Nicotinamide-73hr 0.15 >More info 0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
228 WT seedlings MV -0.50 >More info -0.21 >More info WT seedlings control Seedlings Original data GEO bulk
229 Elevated CO2 AMPLE N DAY -0.63 >More info -0.08 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
230 mp-B4149 mutant IAA -0.50 >More info -0.21 >More info GR-bdl IAA Original data GEO bulk
231 Nicotinamide-69hr 0.21 >More info 0.50 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
232 Nicotinamide-49hr 0.21 >More info 0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
233 WT-drought -0.54 >More info -0.16 >More info WT-control leaf Original data
234 Rosette leaf No2 0.16 >More info 0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
235 Expanding leaf 0.11 >More info 0.59 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
236 Col-0-3h IAA 0.56 >More info 0.13 >More info Col-0-0h IAA whole plant Original data GEO bulk
237 Proximalhalf (leaf7) 0.14 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
238 E.orontii Infection 6 h 0.59 >More info 0.10 >More info Uninfection 6 h Original data Elicitor treatments
239 hy5 low light 0.65 >More info 0.03 >More info Col-O low light Original data GEO bulk
240 Mutant hy5 0.65 >More info 0.03 >More info Col-0 Original data GEO bulk
241 auxin and brassinazole seedlings -0.56 >More info -0.11 >More info auxin seedlings Original data GEO bulk
242 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.53 >More info -0.14 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
243 1 h Light Total RNA -0.03 >More info -0.64 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
244 Selenate (shoot) -0.57 >More info -0.10 >More info Ws (shoot) Original data GEO bulk
245 C58 6dpi 0.57 >More info 0.10 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
246 Shoot Selenate -0.57 >More info -0.10 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
247 IAA 12h 0.53 >More info 0.13 >More info control 12h root Original data GEO bulk
248 penta Alternaria 3dpi -0.61 >More info -0.05 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
249 Mutant iaa17-6 (IAA) 0.74 >More info -0.09 >More info Col (IAA) Original data GEO bulk
250 SLWF infested -0.52 >More info -0.12 >More info SLWF uninfested rosette tissue Original data GEO bulk
251 G3P -0.51 >More info -0.13 >More info Mock distal leaves Original data GEO bulk
252 Petiol (leaf7) 0.08 >More info 0.56 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
253 exo70A1 0.58 >More info 0.06 >More info Col-0 whole plant Original data GEO bulk
254 Pedicels stage15 0.07 >More info 0.56 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
255 dsr1 SA Treated 0.51 >More info 0.12 >More info SA Whole seedling Original data GEO bulk
256 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.52 >More info -0.11 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
257 AZC -0.72 >More info 0.09 >More info noneHS Original data GEO bulk
258 ein2 -0.59 >More info -0.04 >More info Col-0 Leaves Original data GEO bulk
259 abi4-102 -lincomycin 0.64 >More info -0.01 >More info Col-0 -lincomycin Original data GEO bulk
260 Col-0 ozone -0.52 >More info -0.11 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
261 abi4-102 +lincomycin 0.58 >More info 0.05 >More info Col-0 +lincomycin Original data GEO bulk
262 WT cotyledons 0.09 >More info 0.54 >More info Control for tissue data cotyledons Original data
263 Mutant arf2-6 -0.69 >More info 0.06 >More info Col Original data GEO bulk
264 4C 7d 0.56 >More info 0.06 >More info 4C 0h Original data GEO bulk
265 Al treated -0.50 >More info -0.12 >More info control Original data GEO bulk
266 coi1-16 ein2 sid2 ozone -0.54 >More info -0.08 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
267 dicamba 0.65 >More info -0.03 >More info WT mock whole seedling Original data GEO bulk
268 Ambient CO2 fully expanded leaf 0.06 >More info 0.55 >More info Control for tissue data fully expanded leaf Original data
269 GST-overexpression seedlings control -0.51 >More info -0.10 >More info WT seedlings control Seedlings Original data
270 toc1-1-73hr 0.07 >More info 0.53 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
271 Te ozone -0.51 >More info -0.09 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
272 edm2-2 untreated 0.55 >More info 0.04 >More info Col-0 untreated seedlings Original data GEO bulk
273 FOX line K19624 -0.58 >More info -0.01 >More info empty vector control (T3) FOX lines Original data GEO bulk
274 mARF10 -0.08 >More info -0.51 >More info Col-0 Original data GEO bulk
275 Col-O low light -0.67 >More info 0.09 >More info Col-O bule light Original data GEO bulk
276 PIF5ox high R/FR -0.55 >More info -0.03 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
277 Stem 2ndinternode 0.05 >More info 0.53 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
278 Stem 1st node 0.04 >More info 0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
279 high R/FR -0.58 >More info 0.00 >More info low R/FR high R/FR (control) mock spray Original data GEO bulk
280 smg7b-1 -0.57 >More info -0.01 >More info WT whole plant Original data GEO bulk
281 4tga safener 0.55 >More info 0.02 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
282 gun5 control 0.63 >More info -0.06 >More info Col-0 control Original data GEO bulk
283 Ambient CO2 expanding leaf 0.02 >More info 0.55 >More info Control for tissue data expanding leaf Original data
284 ice1 3H Cold -0.53 >More info -0.03 >More info WT 3H Cold Original data GEO bulk
285 WT drought 0.50 >More info 0.05 >More info WT control All aerial tissue Original data GEO bulk
286 pho1 -0.53 >More info -0.02 >More info Col2WT Original data GEO bulk
287 Tsu -Fe 24h Shoots -0.50 >More info -0.05 >More info Tsu +Fe 24h Shoots Original data GEO bulk
288 pvip1 pvip2 -0.62 >More info 0.07 >More info Col-0 whole rosettes Original data GEO bulk
289 rli -0.56 >More info 0.01 >More info WT whole plant Original data GEO bulk
290 Starch sheath 2 days NAA -0.01 >More info 0.56 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
291 entire vegetative rosette 0.59 >More info -0.04 >More info Col-0 Mock WL entire vegetative rosette Original data
292 ATR1 OE 0.58 >More info -0.03 >More info WT for ATR1/MYB51 Original data GEO bulk
293 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
294 6h volatiles Sp. HRO-C48 0.51 >More info 0.03 >More info 6h untreated whole seedling Original data GEO bulk
295 NAA +AA 0.00 >More info -0.54 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
296 agb1 gpa1 +ABA LF 0.61 >More info -0.08 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
297 Tsu -Fe 48h Shoots -0.54 >More info 0.01 >More info Tsu +Fe 24h Shoots Original data GEO bulk
298 Cauline leaves -0.00 >More info 0.53 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
299 Cs shoot 0.27 >More info -0.80 >More info control shoot Original data GEO bulk
300 siliques 0.03 >More info 0.50 >More info Control for tissue data Original data GEO bulk
301 irradiated leaf (cmt 5d) -0.56 >More info 0.04 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
302 gun1-1 -lincomycin 0.55 >More info -0.03 >More info Col-0 -lincomycin Original data GEO bulk
303 Rosette leaf No12 -0.03 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
304 lec1-1 24h post-fertilization Seed -0.01 >More info 0.53 >More info Control for tissue data Original data GEO bulk
305 Apex 5DAS -0.01 >More info 0.53 >More info Control for tissue data Original data GEO bulk
306 M6PR transgenic leaf 0mM NaCl -0.03 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
307 Heat shock optimum -0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
308 red illumination +lincomycin -0.05 >More info 0.57 >More info red illumination -lincomycin Original data GEO bulk
309 4xX2x interploidy cross -0.53 >More info 0.02 >More info 2xX2x cross Original data GEO bulk
310 lateral nectary stage 11-12 -0.01 >More info 0.52 >More info Control for tissue data lateral nectaries Original data GEO bulk
311 pnp1-1 1wk -P -0.50 >More info 0.00 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
312 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 -0.03 >More info 0.53 >More info Control for tissue data Original data GEO bulk
313 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.53 >More info -0.04 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
314 Cotyledons -0.05 >More info 0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
315 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
316 Shoot apex inflorescence (after bolting) -0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
317 Callus -0.02 >More info 0.51 >More info Control for tissue data callus Original data GEO bulk
318 lec1-1 Mature Green Seed -0.04 >More info 0.52 >More info Control for tissue data Original data GEO bulk
319 Carpels stage15 -0.02 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
320 seedling 1.5h after HZE atm-1 -0.02 >More info 0.50 >More info seedling day 1 unirradiated atm-1 1.5h Original data
321 Root from tip to 130 mm proximal to tip (cut
4dpg)		 -0.06 >More info 0.52 >More info Control for tissue data Original data GEO bulk
322 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
323 B5 +AA 0.11 >More info -0.57 >More info B5 -AA B5 media and treated with AA Original data
324 pad4-est1b-1-doublemutant -0.66 >More info 0.21 >More info pad4-mutant developed rosette leaves Original data GEO bulk
325 Leafminer damaged seedlings -0.11 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
326 12h Col-0 -0.50 >More info 0.05 >More info 00h Col-0 Original data GEO bulk
327 Section Root from70 mm to 340 mm harvested
immediately		 -0.07 >More info 0.52 >More info Control for tissue data Original data GEO bulk
328 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 -0.07 >More info 0.52 >More info Control for tissue data Original data GEO bulk
329 Ambient CO2 leaf primordia -0.11 >More info 0.55 >More info Control for tissue data leaf primordia Original data
330 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
331 Shoot apex vegetative -0.12 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
332 pistil 8.0HAP 0.51 >More info -0.08 >More info unpollinated pistil pistil Original data GEO bulk
333 Root from tip to 130 mm proximal to tip (cut
8dpg)		 -0.08 >More info 0.51 >More info Control for tissue data Original data GEO bulk
334 Shoot apex vegetative &Young leaves -0.14 >More info 0.57 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
335 EL (leaves 1-2) 14DAS -0.11 >More info 0.53 >More info Control for tissue data Original data GEO bulk
336 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 -0.12 >More info 0.54 >More info Control for tissue data Original data GEO bulk
337 A. halleri control-leaf -0.08 >More info 0.50 >More info A. petraea control-leaf Original data GEO bulk
338 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 -0.08 >More info 0.50 >More info Control for tissue data Original data GEO bulk
339 MPK6 ox Shoot Hypoxia -0.58 >More info 0.16 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
340 Differentiation 24h 0.52 >More info -0.11 >More info Differentiation 0h leaves Original data
341 torpedo-basal -0.11 >More info 0.52 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
342 Petals stage15 -0.11 >More info 0.51 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
343 Cells whole embryo -0.11 >More info 0.51 >More info Control for tissue data whole embryo Original data
344 Hypocotyl -0.13 >More info 0.52 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
345 Apex 14DAS -0.13 >More info 0.52 >More info Control for tissue data Original data GEO bulk
346 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 -0.12 >More info 0.51 >More info Control for tissue data Original data GEO bulk
347 cortex -0.12 >More info 0.50 >More info Control for tissue data cortex Original data GEO bulk
348 HDG4 -0.12 >More info 0.50 >More info Control for tissue data shoot apical meristem Original data GEO bulk
349 seedling -0.14 >More info 0.52 >More info Control for tissue data seedling Original data GEO bulk
350 Mature roots -0.14 >More info 0.51 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
351 Nuclei suspensor -0.13 >More info 0.50 >More info Control for tissue data suspensor Original data
352 wrky72-1-NOCO2 INFECTED -0.50 >More info 0.14 >More info WT-NOCO2 INFECTED Original data GEO bulk
353 seed germinating in countinuous light 12 h SL -0.17 >More info 0.53 >More info Control for tissue data seed Original data GEO bulk
354 Shoot apex transition (before bolting) -0.17 >More info 0.52 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
355 seed germinating in countinuous light 6 h SL -0.18 >More info 0.52 >More info Control for tissue data seed Original data GEO bulk
356 cdpk6-yfp -0.58 >More info 0.24 >More info Kan seedlings Original data GEO bulk
357 lec1-1 Cotyledon Stage Seed -0.16 >More info 0.50 >More info Control for tissue data Original data GEO bulk
358 4C 24h 0.51 >More info -0.18 >More info 4C 0h Original data GEO bulk
359 unpollinated pistil -0.19 >More info 0.52 >More info Control for tissue data pistil Original data GEO bulk
360 Mutant iaa5_6_19(IAA) 0.51 >More info -0.19 >More info Col (IAA) Original data GEO bulk
361 seed germinating in countinuous light 48 h SL -0.23 >More info 0.54 >More info Control for tissue data seed Original data GEO bulk
362 pGL1::GL1-GR Dex 24hours -0.20 >More info 0.51 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
363 seedling 12h after Gamma atm-1 -0.59 >More info 0.28 >More info seedling day 1 unirradiated atm-1 12h Original data
364 ARR22-ox -0.78 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
365 toc1-1-81hr -0.52 >More info 0.23 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
366 mutant-line409 0.58 >More info -0.30 >More info WT-control whole plant Original data GEO bulk
367 seedling 12h after HZE atm-1 -0.54 >More info 0.28 >More info seedling day 1 unirradiated atm-1 12h Original data
368 NahG -0.59 >More info 0.33 >More info Col-0 Leaves Original data GEO bulk
369 Cor hrpS 10h -0.35 >More info 0.60 >More info Mock 10h Cor hrpS Original data GEO bulk
370 hrpA fliC 7h -0.29 >More info 0.53 >More info Mock 7h hrpA fliC Original data GEO bulk
371 TNT-seedlings -0.57 >More info 0.33 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
372 Laer Flg22(Agrobacterium) 2h -0.44 >More info 0.65 >More info Laer Control leaf discs Original data GEO bulk
373 Senescing leaf -0.31 >More info 0.51 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
374 Col0-PsmES4326-24hpi -0.49 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
375 siliques AtHb1 control -0.40 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk