4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 9 hr Hypoxia Total RNA
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List of experiments correlated with "9 hr Hypoxia Total RNA"  Help Download transcriptome of top 30
Score Experiment Correlation from
9 hr Hypoxia Total RNA		 Correlation to
9 hr Hypoxia Total RNA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 9 hr Hypoxia Total RNA 1.00 >More info 1.00 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
2 9 hr Hypoxia 1 hr recovery Total RNA 0.89 >More info 0.89 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
3 9 hr Hypoxia IP RNA 0.86 >More info 0.88 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
4 2 hr Hypoxia Total RNA 0.83 >More info 0.88 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
5 9 hr Hypoxia 1 hr recovery IP RNA 0.85 >More info 0.84 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
6 Col-0 2HS 0.81 >More info 0.87 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
7 Col-0 wt Hypoxic 0.78 >More info 0.84 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
8 shoot hypoxia total 0.74 >More info 0.87 >More info shoot control total Original data GEO bulk
9 Col-0 low oxygen 0.79 >More info 0.79 >More info Col-0 control low oxygen root Original data GEO bulk
10 WT Shoot Hypoxia 0.73 >More info 0.84 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
11 MPK6 ox Shoot Hypoxia 0.71 >More info 0.84 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
12 2 hr Hypoxia IP RNA 0.76 >More info 0.78 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
13 root hypoxia total 0.74 >More info 0.79 >More info root control total Original data GEO bulk
14 Anoxia 0.75 >More info 0.77 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
15 roottip hypoxia total 0.69 >More info 0.79 >More info roottip control total Original data GEO bulk
16 WT Root Hypoxia 0.65 >More info 0.81 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
17 Heat and anoxia 0.67 >More info 0.77 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
18 AgNO3 3 h 0.63 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
19 Ws HS 0.60 >More info 0.80 >More info Ws control heat shocked seedling Original data GEO bulk
20 SA 0.67 >More info 0.71 >More info WT mock Whole seedling Original data GEO bulk
21 plant (tga2-5-6) 4h phytoprostane A1 0.59 >More info 0.79 >More info plant (tga2-5-6) 4h control Original data GEO bulk
22 5-Triiodobenzoic acid3 h 0.60 >More info 0.78 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
23 Col-0 HS 0.54 >More info 0.83 >More info Col-0 control heat shocked seedling Original data GEO bulk
24 WT (Col-0) heat shock 0.54 >More info 0.83 >More info WT (Col-0) whole seedling Original data GEO bulk
25 TNT-seedlings 0.56 >More info 0.80 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
26 WT+H2O2 0.65 >More info 0.71 >More info WT H2O2 Original data GEO bulk
27 CMP 4hr 0.69 >More info 0.67 >More info Acetone 4hr root Original data GEO bulk
28 root - 01% oxygen - 2h 0.51 >More info 0.85 >More info root - 21% oxygen - 2h Original data GEO bulk
29 Col upon hypoxia 6 hrs 0.69 >More info 0.66 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
30 Col-0 37C 0.60 >More info 0.75 >More info Col-0 22C Original data GEO bulk
31 WT 30μM arsenate 8 hours. 0.61 >More info 0.74 >More info WT control (not supplemented). Original data
32 dicamba 0.68 >More info 0.66 >More info WT mock whole seedling Original data GEO bulk
33 Seedling-HeatStressed TOTALmRNA 0.59 >More info 0.75 >More info Seedling-control TOTALmRNA seedling Original data
34 MPK6 ox Root Hypoxia 0.64 >More info 0.69 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
35 oligomycin 1 h 0.59 >More info 0.72 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
36 oligomycin 4 h 0.64 >More info 0.66 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
37 Seedling-HeatStressed POLYSOMESmRNA 0.55 >More info 0.75 >More info Seedling-control POLYSOMESmRNA seedling Original data
38 Cocultivation 8 hrs root 0.62 >More info 0.68 >More info Mock cocultivation 8 hrs root Root Original data
39 WT-16ºC -0.59 >More info -0.70 >More info WT-23ºC Original data GEO bulk
40 WT AntimycinA 3h 0.60 >More info 0.67 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
41 Heat 0.57 >More info 0.69 >More info Control 90 minutes at 38°C. Original data GEO bulk
42 R. solani AG8 0.57 >More info 0.69 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
43 Cycloheximide 3 h 0.62 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
44 WT seedlings MV 0.55 >More info 0.69 >More info WT seedlings control Seedlings Original data GEO bulk
45 hira-root -0.61 >More info -0.62 >More info WT-root root Original data
46 dark-hs 0.55 >More info 0.67 >More info dark-control seedling Original data
47 Phytoprostane A1 4 h 0.50 >More info 0.72 >More info Col-0 Original data GEO bulk
48 toc1-1-77hr 0.51 >More info 0.71 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
49 inhibitor B Treated 0.46 >More info 0.76 >More info Negative Control Original data GEO bulk
50 low CO2 + light 0.49 >More info 0.73 >More info normal CO2 + light Original data GEO bulk
51 CMP 24hr 0.65 >More info 0.55 >More info Acetone 24hr root Original data GEO bulk
52 Col-0 Root 100 mM ATP 30 min 0.57 >More info 0.63 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
53 root Dosed gold 0.62 >More info 0.58 >More info root No gold .125 mM gold 24 h roots Original data
54 4d red light grown hmr-5 seedlings 0.62 >More info 0.58 >More info 4d red light grown WT(Col-0) seedlings Original data
55 0.125 mM gold 24 h 0.62 >More info 0.58 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
56 NJ15 0.41 >More info 0.78 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
57 Fenclorim 4hr 0.57 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
58 P.p 6hai 0.64 >More info 0.53 >More info At-Control roots Original data GEO bulk
59 flu 0.51 >More info 0.66 >More info WT Col Original data GEO bulk
60 bak1-3 +Pep2 10h 0.59 >More info 0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
61 WT H2O2 3h 0.53 >More info 0.64 >More info WT water 3h 3h_H2O2 Original data GEO bulk
62 Whole root - low pH 12H 0.51 >More info 0.65 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
63 toc1-1-53hr 0.41 >More info 0.75 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
64 Root submergence 24h 0.53 >More info 0.62 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
65 PNO8 3 h 0.58 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
66 atmyc2 cop1 Seedling BL 0.54 >More info 0.61 >More info WT Seedling BL Original data GEO bulk
67 6h +Pi -0.54 >More info -0.60 >More info 6h -Pi root Original data GEO bulk
68 K starvation (root) 0.49 >More info 0.65 >More info Ws (root) Original data GEO bulk
69 Root -K 0.49 >More info 0.65 >More info Control-root Original data GEO bulk
70 coi1-2 0.51 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
71 whole roots -Fe 72 hour 0.51 >More info 0.62 >More info whole roots standard Original data GEO bulk
72 Fe starvation 72 h 0.51 >More info 0.62 >More info Control Original data GEO bulk
73 FHY3p dark+DEX -0.59 >More info -0.54 >More info FHY3p dark+mock Original data GEO bulk
74 Root dark control 24h 0.49 >More info 0.64 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
75 seedlings-week-old RECA1-overexpressing
transgenic		 0.59 >More info 0.53 >More info seedlings-week-old Col-0 seedlings Original data
76 P.p 30hai 0.63 >More info 0.49 >More info At-Control roots Original data GEO bulk
77 oas-a1.1 Cd 18h 0.49 >More info 0.63 >More info Cd 18h root Root Original data GEO bulk
78 CeO2 germinant -0.45 >More info -0.67 >More info Millipore Water germinant CeO2 seedling Original data
79 root protoplasts 40 mM NaCl 0.55 >More info 0.56 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
80 anac017-2 AntimycinA 3h -0.58 >More info -0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
81 DFPM 0.59 >More info 0.51 >More info control Original data GEO bulk
82 Mutant axr3-1 (IAA) 0.45 >More info 0.65 >More info Col (IAA) Original data GEO bulk
83 QK HS 0.49 >More info 0.61 >More info QK control heat shocked seedling Original data GEO bulk
84 9m.KCl 0.56 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
85 (Col-0)+200 uM As 0.45 >More info 0.64 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
86 plant (Col-0) 4h phytoprostane A1 0.48 >More info 0.61 >More info plant (tga2-5-6) 4h control Original data GEO bulk
87 Wounding Stress3 h (root) -0.55 >More info -0.53 >More info Stress mock 3 h (root) Original data Stress treatments
88 root stele 40 mM NaCls 0.56 >More info 0.52 >More info root stele Original data GEO bulk
89 BLM+INA 0.50 >More info 0.58 >More info CK BLM and INA seedling Original data
90 Col-Luc WT 3h antimycin A 0.51 >More info 0.57 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
91 IAA/inhibitor B Treated 0.35 >More info 0.73 >More info IAA Treated Original data GEO bulk
92 WT 30μM phosphate 8 hours. -0.42 >More info -0.66 >More info WT control (not supplemented). Original data
93 dorn1-1 Root 100 mM ATP 30 min -0.43 >More info -0.65 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
94 flu over-tAPX 0.45 >More info 0.62 >More info WT Col Original data GEO bulk
95 whole roots 140 mM NaCl 1 hour 0.55 >More info 0.51 >More info whole roots standard Original data GEO bulk
96 SCR-GR Time 12H Dex 0.59 >More info 0.47 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
97 Selenate (root) 0.50 >More info 0.56 >More info Ws (root) Original data GEO bulk
98 Root Selenate 0.50 >More info 0.56 >More info Root control 40 micromolar selenate Root Original data GEO bulk
99 gai Control 0.56 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
100 Osmotic Stress 24 h (root) 0.61 >More info 0.45 >More info Stress mock 24 h (root) Original data Stress treatments
101 ARR22-ox (t-zeatin 3 h) 0.56 >More info 0.50 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
102 whole roots -Fe 48 hour 0.48 >More info 0.58 >More info whole roots standard Original data GEO bulk
103 inhibitor A Treated 0.34 >More info 0.72 >More info Negative Control Original data GEO bulk
104 Col0-PsmES4326-24hpi 0.45 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
105 toc1-1-85hr 0.33 >More info 0.73 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
106 pepr1-1 Pepr2-3 +Pep2 10h -0.51 >More info -0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
107 embryo paclobutrazol 0.53 >More info 0.52 >More info embryo-control paclobutrazol embryo Original data GEO bulk
108 cop1 Seedling BL 0.51 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
109 sfr6 drought -0.34 >More info -0.71 >More info WT drought All aerial tissue Original data GEO bulk
110 csn5 (csn5a-2 csn5b) light 0.58 >More info 0.47 >More info WT light Original data GEO bulk
111 cngc4 0.47 >More info 0.58 >More info Ws-2 Seedlings Original data GEO bulk
112 mp-B4149 mutant IAA 0.56 >More info 0.48 >More info GR-bdl IAA Original data GEO bulk
113 Root submergence 7h 0.51 >More info 0.53 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
114 IMI 4mM 0.51 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
115 root - 01% oxygen - 48h 0.40 >More info 0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
116 toc1-1-81hr 0.40 >More info 0.64 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
117 WT (Col) glucose -0.45 >More info -0.59 >More info WT (Col) glucose seedlings Original data GEO bulk
118 Rose Bengal 0.5 uM 0.35 >More info 0.69 >More info Control RB and PER Rose Bengal Original data
119 Nicotinamide-53hr 0.50 >More info 0.53 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
120 R. solani AG2-1 0.42 >More info 0.61 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
121 RRE2 Chitin 0.53 >More info 0.49 >More info Chitin Original data GEO bulk
122 rcf1-1 cold 24h 0.50 >More info 0.52 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
123 Aerobic e1 ate2 0.27 >More info 0.75 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
124 (Col-0)+100 uM As 0.41 >More info 0.61 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
125 whole roots 140 mM NaCl 30 minutes 0.49 >More info 0.53 >More info whole roots standard Original data GEO bulk
126 Seedling KUA1-IOX est 0.60 >More info 0.41 >More info Seedling KUA1-IOX mock Original data
127 15m.KCl 0.50 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
128 Mutant axr3-1 0.42 >More info 0.59 >More info Col Original data GEO bulk
129 root - 01% oxygen - 30min 0.26 >More info 0.75 >More info root - 21% oxygen - 30min Original data GEO bulk
130 Root dark control 7h 0.43 >More info 0.58 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
131 safener treated 0.49 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
132 protoplasted roots pH4.6 0.49 >More info 0.52 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
133 pepr1-1 Pepr2-3 +Pep2 2h -0.41 >More info -0.60 >More info WT +Pep2 2h Pep2 Original data GEO bulk
134 Fenclorim 24hr 0.57 >More info 0.43 >More info Acetone 24hr root Original data GEO bulk
135 P.p 10.5hai 0.58 >More info 0.42 >More info At-Control roots Original data GEO bulk
136 embryo ABA 0.51 >More info 0.49 >More info embryo-control ABA embryo Original data GEO bulk
137 til1-1 22C 0.36 >More info 0.64 >More info Col-0 22C Original data GEO bulk
138 root - 04% oxygen - 2h 0.15 >More info 0.84 >More info root - 21% oxygen - 2h Original data GEO bulk
139 toc1-1-57hr 0.42 >More info 0.57 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
140 Nicotinamide-57hr 0.49 >More info 0.50 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
141 npr1-1 SA -0.54 >More info -0.44 >More info Col-0 SA complete seedling Original data
142 DUO1 induced 24h 0.43 >More info 0.55 >More info 24hr-not-induced whole plant Original data GEO bulk
143 P.p 2.5hai 0.46 >More info 0.52 >More info At-Control roots Original data GEO bulk
144 4C 1h 0.36 >More info 0.62 >More info 4C 0h Original data GEO bulk
145 NFA8 roots 2hr KNO3 nitrogen 0.45 >More info 0.53 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
146 24h +Pi -0.55 >More info -0.42 >More info 24h -Pi root Original data GEO bulk
147 Col in Pi deficiency medium 0.38 >More info 0.59 >More info Col in control medium root Original data GEO bulk
148 SA 4mM 0.47 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
149 pho1 0.40 >More info 0.57 >More info Col2WT Original data GEO bulk
150 GO5; 0h switch to ambient CO2 concentrations; -0.44 >More info -0.53 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
151 seedling 1.5h after HZE WT 0.53 >More info 0.43 >More info seedling day 1 unirradiated WT 1.5h Original data
152 Light 0.34 >More info 0.62 >More info Control Original data GEO bulk
153 1h +Pi -0.42 >More info -0.54 >More info 1h -Pi root Original data GEO bulk
154 1 h Light Total RNA -0.45 >More info -0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
155 bak1-3 +Pep2 2h 0.43 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
156 seedling 6h after HZE WT 0.45 >More info 0.51 >More info seedling day 1 unirradiated WT 6h Original data
157 ABA DFPM 0.52 >More info 0.43 >More info control Original data GEO bulk
158 Protoplast Induced 0.33 >More info 0.62 >More info Uninduced Original data GEO bulk
159 Heat shock optimum 0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
160 (Ws-2)+100 uM As 0.45 >More info 0.50 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
161 bbx24 in Simulated Shade -0.44 >More info -0.51 >More info WT in simulated shade shade seedling Original data
162 seedlings +5AC 0.52 >More info 0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
163 toc1-1-73hr 0.30 >More info 0.64 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
164 Aerobic prt6 0.29 >More info 0.65 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
165 bHLH122 ox -0.30 >More info -0.64 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
166 pmr5 pmr6 0.42 >More info 0.52 >More info Col-0 Original data GEO bulk
167 root - 04% oxygen - 48h 0.14 >More info 0.79 >More info root - 21% oxygen - 48h Original data GEO bulk
168 35S::PI ap3-3 35S::AP-GR +DEX 0.40 >More info 0.53 >More info 0hr DEX Original data GEO bulk
169 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
170 Chemically 0.28 >More info 0.65 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
171 Col-0 under 4 days salt 0.51 >More info 0.42 >More info Col-0 under control 4 days salt treatment rosette Original data
172 -Sulfate 24 h 0.32 >More info 0.61 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
173 sex1-3 0.36 >More info 0.57 >More info Col-WT leaves Original data GEO bulk
174 Tsu-1 -Fe 24h 0.41 >More info 0.52 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
175 Tsu -Fe 24h Roots 0.41 >More info 0.52 >More info Tsu +Fe 24h Roots Original data GEO bulk
176 3x(m) 0.24 >More info 0.69 >More info 2x two week old seedlings Original data
177 estradiole-induced ANAC092 -0.38 >More info -0.54 >More info transgenic (empty vector inducible system) Original data GEO bulk
178 chito-tetramer 0.41 >More info 0.51 >More info Col Mock Original data GEO bulk
179 spch 0.41 >More info 0.51 >More info Col-0 WT whole seedling Original data GEO bulk
180 cop1 Seedling BL+ABA 0.53 >More info 0.38 >More info WT Seedling BL+ABA Original data GEO bulk
181 Col-0 (t-zeatin 3 h) -0.35 >More info -0.56 >More info Col-0 Original data Cytokinin treatment of seedlings
182 chito-octamer 0.40 >More info 0.51 >More info Col Mock Original data GEO bulk
183 seedling -S Exp 0.23 >More info 0.68 >More info seedling FN Exp seedling Original data
184 gun4-1 0.41 >More info 0.50 >More info WT Col-0 seedling Original data GEO bulk
185 WT drought 0.33 >More info 0.58 >More info WT control All aerial tissue Original data GEO bulk
186 hypoxic 0.38 >More info 0.52 >More info WT aerobic hypoxia Original data GEO bulk
187 pmr5 0.37 >More info 0.53 >More info Col-0 Original data GEO bulk
188 seedling 12h after HZE WT 0.37 >More info 0.53 >More info seedling day 1 unirradiated WT 12h Original data
189 root - 04% oxygen - 30min 0.13 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
190 Heat shock 20%Inhibition 0.36 >More info 0.53 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
191 cat2-short-day 2d 0.35 >More info 0.54 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
192 root longitudinal zone-4 pH 4.6 0.37 >More info 0.52 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
193 WT 3H Cold 0.28 >More info 0.61 >More info WT control Original data GEO bulk
194 CMV-A2b mutant 0.35 >More info 0.54 >More info Mock-At Aerial tissues Original data GEO bulk
195 21h-DC3000 hrpA -0.27 >More info -0.61 >More info 21h-DC3000 leaves Original data GEO bulk
196 cat2-short-day 4d 0.25 >More info 0.63 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
197 seedling h S Exp -0.29 >More info -0.59 >More info seedling -S Exp seedling Original data
198 OsSAP11 expressing -0.32 >More info -0.55 >More info WT seedlings Original data GEO bulk
199 bri1-116 0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
200 AsAKiin11 T2 0.23 >More info 0.64 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
201 Col ozone 3h 0.30 >More info 0.57 >More info Col clean-air 3h ozone Original data GEO bulk
202 8hr-pH4.5 0.34 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
203 siliques AtHb1 control 0.34 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
204 sfr3 control 0.34 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
205 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
206 JA 0.36 >More info 0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
207 amiRAP aerobic -0.25 >More info -0.61 >More info WT aerobic aerobic Original data GEO bulk
208 MG132 3 h 0.29 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
209 WT 1wk -P 0.33 >More info 0.52 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
210 oas-a1.1 Cd 24h 0.20 >More info 0.65 >More info Cd 24h root Shoot Original data GEO bulk
211 shoot-10 μM DEX- 24hr 0.32 >More info 0.53 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
212 light-hs 0.26 >More info 0.59 >More info light-control seedling Original data
213 HSP90 Reduced RNAi-B1 0.50 >More info 0.34 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
214 Leafminer damaged seedlings 0.28 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
215 WT+chitooctaose 0.25 >More info 0.59 >More info WT+water chitooctaose seedlings Original data GEO bulk
216 cell culture 4 h phytoprostane A1 0.30 >More info 0.53 >More info cell culture 4 h control Original data GEO bulk
217 HS 0.31 >More info 0.52 >More info noneHS Original data GEO bulk
218 Leaf wounded 0.28 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
219 Hydrogen Peroxide 500 uM 0.29 >More info 0.54 >More info Control RB and PER Hydrogen Peroxide Original data
220 phyB Rc50 0.53 >More info 0.29 >More info WT(Ler) Rc50 Original data GEO bulk
221 root hypoxia pGL2 0.28 >More info 0.54 >More info root hypoxia total hypoxia root Original data GEO bulk
222 12m.KCl 0.32 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
223 Blue Light 45 min -0.13 >More info -0.69 >More info White Light 45min Original data Light treatments
224 20h Col-0 0.23 >More info 0.59 >More info 00h Col-0 Original data GEO bulk
225 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.50 >More info 0.30 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
226 anac017-2 water 3h 0.24 >More info 0.56 >More info WT water 3h 3h_water Original data GEO bulk
227 root - 08% oxygen - 30min 0.01 >More info 0.78 >More info root - 21% oxygen - 30min Original data GEO bulk
228 Shoot -P 0.18 >More info 0.61 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
229 root - 08% oxygen - 2h 0.02 >More info 0.76 >More info root - 21% oxygen - 2h Original data GEO bulk
230 20m.KCl -0.19 >More info -0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
231 16h Col-0 0.24 >More info 0.54 >More info 00h Col-0 Original data GEO bulk
232 ahg2-1sid2-2 0.21 >More info 0.57 >More info WT (Col) control Original data GEO bulk
233 whole roots -Fe 6 hour 0.10 >More info 0.67 >More info whole roots standard Original data GEO bulk
234 WT heat shock 0.19 >More info 0.58 >More info WT untreated above-ground parts Original data GEO bulk
235 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
236 WT 3h -P 0.25 >More info 0.51 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
237 upb1-1 elongation zone -0.25 >More info -0.51 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
238 ckh1 CK200 0.26 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
239 cpctry 0.14 >More info 0.61 >More info Col Original data GEO bulk
240 35S:PCO1 hypoxia -0.25 >More info -0.50 >More info WT hypoxia whole rosette Original data
241 agb1 -ABA LF 0.17 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
242 dense canopy 0.22 >More info 0.52 >More info single (control) petiole Original data GEO bulk
243 abi1 hypocotyl 0.14 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
244 WT 1mM phosphate 8 hours. -0.14 >More info -0.58 >More info WT control (not supplemented). Original data
245 Red/FR Light45min -0.08 >More info 0.79 >More info FarRed Light 45min Original data Light treatments
246 root longitudinal zone-1 -Fe 0.14 >More info 0.57 >More info root longitudinal zone-1 standard Original data GEO bulk
247 12h volatiles Sm. R3089 -0.13 >More info -0.57 >More info 12h untreated whole seedling Original data GEO bulk
248 seedling 30 min S Exp -0.13 >More info -0.57 >More info seedling -S Exp seedling Original data
249 ptpks2 -0.14 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
250 desiccated mature pollen grains -0.17 >More info -0.52 >More info hydrated pollen grains Original data GEO bulk
251 6h volatiles Sp. HRO-C48 0.03 >More info 0.59 >More info 6h untreated whole seedling Original data GEO bulk
252 SLWF infested 0.52 >More info 0.05 >More info SLWF uninfested rosette tissue Original data GEO bulk
253 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
254 seedling 3h after HZE WT 0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
255 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
256 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
257 siliques WT hypoxia 0.52 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
258 NahG 0.06 >More info -0.53 >More info Col-0 Leaves Original data GEO bulk
259 4d red light grown hmr-22 seedlings 0.65 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
260 vte2-1 1d vernalization -0.10 >More info 0.54 >More info WT 1d vernalization Original data GEO bulk
261 vte2 leaves 0h LT -0.11 >More info 0.52 >More info Col leaves 0h LT h 9-11th adult leaves Original data