4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 9 hr Hypoxia IP RNA
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List of experiments correlated with "9 hr Hypoxia IP RNA"  Help Download transcriptome of top 30
Score Experiment Correlation from
9 hr Hypoxia IP RNA		 Correlation to
9 hr Hypoxia IP RNA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 9 hr Hypoxia IP RNA 1.00 >More info 1.00 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
2 9 hr Hypoxia Total RNA 0.88 >More info 0.86 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
3 9 hr Hypoxia 1 hr recovery IP RNA 0.87 >More info 0.86 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
4 2 hr Hypoxia IP RNA 0.84 >More info 0.87 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
5 Col-0 2HS 0.80 >More info 0.87 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
6 9 hr Hypoxia 1 hr recovery Total RNA 0.85 >More info 0.81 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
7 2 hr Hypoxia Total RNA 0.83 >More info 0.83 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
8 WT Shoot Hypoxia 0.73 >More info 0.85 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
9 shoot hypoxia total 0.72 >More info 0.84 >More info shoot control total Original data GEO bulk
10 MPK6 ox Shoot Hypoxia 0.75 >More info 0.81 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
11 Anoxia 0.71 >More info 0.79 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
12 Col-0 wt Hypoxic 0.70 >More info 0.79 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
13 Col-0 low oxygen 0.75 >More info 0.73 >More info Col-0 control low oxygen root Original data GEO bulk
14 root hypoxia total 0.70 >More info 0.75 >More info root control total Original data GEO bulk
15 roottip hypoxia total 0.63 >More info 0.75 >More info roottip control total Original data GEO bulk
16 Seedling-HeatStressed POLYSOMESmRNA 0.63 >More info 0.74 >More info Seedling-control POLYSOMESmRNA seedling Original data
17 WT AntimycinA 3h 0.68 >More info 0.68 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
18 Heat and anoxia 0.62 >More info 0.74 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
19 CMP 4hr 0.65 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
20 WT+H2O2 0.61 >More info 0.72 >More info WT H2O2 Original data GEO bulk
21 Seedling-HeatStressed TOTALmRNA 0.59 >More info 0.73 >More info Seedling-control TOTALmRNA seedling Original data
22 oligomycin 4 h 0.64 >More info 0.67 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
23 flu 0.59 >More info 0.72 >More info WT Col Original data GEO bulk
24 Col-Luc WT 3h antimycin A 0.67 >More info 0.64 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
25 AgNO3 3 h 0.60 >More info 0.70 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
26 WT seedlings MV 0.56 >More info 0.72 >More info WT seedlings control Seedlings Original data GEO bulk
27 anac017-2 AntimycinA 3h -0.67 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
28 PNO8 3 h 0.54 >More info 0.74 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
29 Cycloheximide 3 h 0.61 >More info 0.67 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
30 low CO2 + light 0.57 >More info 0.71 >More info normal CO2 + light Original data GEO bulk
31 Fenclorim 4hr 0.59 >More info 0.68 >More info Acetone 4hr root Original data GEO bulk
32 WT Root Hypoxia 0.50 >More info 0.76 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
33 flu over-tAPX 0.58 >More info 0.68 >More info WT Col Original data GEO bulk
34 root - 01% oxygen - 2h 0.42 >More info 0.84 >More info root - 21% oxygen - 2h Original data GEO bulk
35 5-Triiodobenzoic acid3 h 0.52 >More info 0.73 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
36 Col-0 37C 0.58 >More info 0.66 >More info Col-0 22C Original data GEO bulk
37 CMP 24hr 0.65 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
38 Col-0 HS 0.48 >More info 0.76 >More info Col-0 control heat shocked seedling Original data GEO bulk
39 WT (Col-0) heat shock 0.48 >More info 0.76 >More info WT (Col-0) whole seedling Original data GEO bulk
40 plant (tga2-5-6) 4h phytoprostane A1 0.50 >More info 0.73 >More info plant (tga2-5-6) 4h control Original data GEO bulk
41 Ws HS 0.50 >More info 0.72 >More info Ws control heat shocked seedling Original data GEO bulk
42 WT H2O2 3h 0.55 >More info 0.66 >More info WT water 3h 3h_H2O2 Original data GEO bulk
43 DFPM 0.64 >More info 0.57 >More info control Original data GEO bulk
44 oligomycin 1 h 0.54 >More info 0.67 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
45 MPK6 ox Root Hypoxia 0.55 >More info 0.66 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
46 pho1 0.53 >More info 0.67 >More info Col2WT Original data GEO bulk
47 Col0-PsmES4326-24hpi 0.59 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
48 IMI 4mM 0.61 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
49 npr1-1 SA -0.67 >More info -0.52 >More info Col-0 SA complete seedling Original data
50 Col upon hypoxia 6 hrs 0.59 >More info 0.60 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
51 21h-DC3000 hrpA -0.44 >More info -0.75 >More info 21h-DC3000 leaves Original data GEO bulk
52 TNT-seedlings 0.50 >More info 0.68 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
53 Cocultivation 8 hrs root 0.56 >More info 0.62 >More info Mock cocultivation 8 hrs root Root Original data
54 bak1-3 +Pep2 10h 0.60 >More info 0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
55 Aerobic e1 ate2 0.41 >More info 0.77 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
56 WT 30μM arsenate 8 hours. 0.51 >More info 0.65 >More info WT control (not supplemented). Original data
57 safener treated 0.55 >More info 0.61 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
58 SA 4mM 0.55 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
59 NJ15 0.40 >More info 0.76 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
60 ein2-1 9 hpi A. brassicicola 0.57 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 inhibitor A Treated 0.42 >More info 0.74 >More info Negative Control Original data GEO bulk
62 WT 30μM phosphate 8 hours. -0.47 >More info -0.69 >More info WT control (not supplemented). Original data
63 WT 1wk -P 0.51 >More info 0.64 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
64 seedlings-week-old RECA1-overexpressing
transgenic		 0.54 >More info 0.61 >More info seedlings-week-old Col-0 seedlings Original data
65 FHY3p dark+DEX -0.62 >More info -0.53 >More info FHY3p dark+mock Original data GEO bulk
66 dark-hs 0.50 >More info 0.64 >More info dark-control seedling Original data
67 pepr1-1 Pepr2-3 +Pep2 2h -0.50 >More info -0.64 >More info WT +Pep2 2h Pep2 Original data GEO bulk
68 WT+chitooctaose 0.45 >More info 0.69 >More info WT+water chitooctaose seedlings Original data GEO bulk
69 WT 2-4h Xanthomonas 0.50 >More info 0.63 >More info WT T0 Original data GEO bulk
70 root Dosed gold 0.58 >More info 0.55 >More info root No gold .125 mM gold 24 h roots Original data
71 0.125 mM gold 24 h 0.58 >More info 0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
72 B.cinerea 18 h infection 0.49 >More info 0.64 >More info Mock 18 h Original data Botrytis cinerea infection
73 Botrytis cinerea 18h 0.49 >More info 0.64 >More info control 18h Original data GEO bulk
74 SA 0.56 >More info 0.56 >More info WT mock Whole seedling Original data GEO bulk
75 seedlings protease IV 0.54 >More info 0.58 >More info seedlings nontreated control whole seedling Original data
76 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.53 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
77 Col ozone 3h 0.44 >More info 0.67 >More info Col clean-air 3h ozone Original data GEO bulk
78 pmr5 pmr6 0.54 >More info 0.57 >More info Col-0 Original data GEO bulk
79 Heat 0.49 >More info 0.62 >More info Control 90 minutes at 38°C. Original data GEO bulk
80 coi1-2 0.49 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
81 35S::PI ap3-3 35S::AP-GR +DEX 0.38 >More info 0.73 >More info 0hr DEX Original data GEO bulk
82 pepr1-1 Pepr2-3 +Pep2 10h -0.52 >More info -0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
83 cop1 Seedling BL 0.51 >More info 0.59 >More info WT Seedling BL Original data GEO bulk
84 dicamba 0.56 >More info 0.54 >More info WT mock whole seedling Original data GEO bulk
85 CMV-A2b mutant 0.47 >More info 0.63 >More info Mock-At Aerial tissues Original data GEO bulk
86 P.p 30hai 0.53 >More info 0.56 >More info At-Control roots Original data GEO bulk
87 1 h Light IP RNA -0.51 >More info -0.58 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
88 Col-0 under 4 days salt 0.59 >More info 0.50 >More info Col-0 under control 4 days salt treatment rosette Original data
89 SCR-GR Time 12H Dex 0.60 >More info 0.49 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
90 gai Control 0.57 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
91 35S:RPS4 eds1-2 8h -0.57 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
92 chito-octamer 0.48 >More info 0.61 >More info Col Mock Original data GEO bulk
93 R. solani AG8 0.47 >More info 0.62 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
94 atmyc2 cop1 Seedling BL 0.50 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
95 inhibitor B Treated 0.40 >More info 0.68 >More info Negative Control Original data GEO bulk
96 toc1-1-77hr 0.47 >More info 0.61 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
97 hrpA fliC 7h 0.46 >More info 0.62 >More info Mock 7h hrpA fliC Original data GEO bulk
98 P.p 6hai 0.56 >More info 0.51 >More info At-Control roots Original data GEO bulk
99 CMV-WT 0.54 >More info 0.53 >More info Mock-At Aerial tissues Original data GEO bulk
100 Cor 10h 0.56 >More info 0.51 >More info Mock 10h Cor Original data GEO bulk
101 Phytoprostane A1 4 h 0.40 >More info 0.67 >More info Col-0 Original data GEO bulk
102 cat2-short-day 2d 0.43 >More info 0.64 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
103 Fenclorim 24hr 0.57 >More info 0.50 >More info Acetone 24hr root Original data GEO bulk
104 pmr5 0.47 >More info 0.60 >More info Col-0 Original data GEO bulk
105 Seedling KUA1-IOX est 0.54 >More info 0.52 >More info Seedling KUA1-IOX mock Original data
106 Col-0 9 hpi A. brassicicola 0.53 >More info 0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
107 6h +Pi -0.52 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
108 oas-a1.1 Cd 18h 0.42 >More info 0.64 >More info Cd 18h root Root Original data GEO bulk
109 CeO2 germinant -0.39 >More info -0.67 >More info Millipore Water germinant CeO2 seedling Original data
110 root stele 40 mM NaCls 0.54 >More info 0.51 >More info root stele Original data GEO bulk
111 Light 0.43 >More info 0.62 >More info Control Original data GEO bulk
112 csn5 (csn5a-2 csn5b) light 0.57 >More info 0.48 >More info WT light Original data GEO bulk
113 RRE2 Chitin 0.57 >More info 0.47 >More info Chitin Original data GEO bulk
114 GST 4 h (leaf) 0.49 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
115 rcf1-1 cold 24h 0.53 >More info 0.50 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
116 Botrytis cinerea 48h 0.51 >More info 0.52 >More info control 48h Original data GEO bulk
117 4d red light grown hmr-5 seedlings 0.54 >More info 0.49 >More info 4d red light grown WT(Col-0) seedlings Original data
118 ataf1-1 mutant Col-0 Bgh inoculated 0.52 >More info 0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
119 GST NPP1 4 h (leaf) 0.45 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
120 rosette Dark Wounded 0.48 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
121 sfr6 drought -0.37 >More info -0.66 >More info WT drought All aerial tissue Original data GEO bulk
122 root protoplasts 40 mM NaCl 0.49 >More info 0.54 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
123 Rose Bengal 0.5 uM 0.33 >More info 0.70 >More info Control RB and PER Rose Bengal Original data
124 gh3.5-1D 48 hpi 0.56 >More info 0.46 >More info Col-0 uninoculated Original data GEO bulk
125 ABA DFPM 0.60 >More info 0.42 >More info control Original data GEO bulk
126 WT flg22 2h 0.55 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
127 15m.KCl 0.49 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
128 gun1gun5 far-red pretreated -0.42 >More info -0.60 >More info WT far-red pretreated Original data GEO bulk
129 WT 1mM phosphate 8 hours. -0.35 >More info -0.67 >More info WT control (not supplemented). Original data
130 dorn1-1 Root 100 mM ATP 30 min -0.41 >More info -0.61 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
131 arf2 brz -0.52 >More info -0.49 >More info arf2 mock Original data GEO bulk
132 Sulfometuron EC50 0.51 >More info 0.50 >More info Carrier Original data GEO bulk
133 Col whole leaf 5dpi 0.44 >More info 0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
134 chito-tetramer 0.43 >More info 0.58 >More info Col Mock Original data GEO bulk
135 cpr5 0.46 >More info 0.55 >More info WT(COL) Original data GEO bulk
136 Osmotic Stress 24 h (shoot) 0.58 >More info 0.42 >More info Stress mock 24 h (shoot) Original data Stress treatments
137 Mutant siz1-3 (Drought) 0.50 >More info 0.50 >More info Col-0 (Drought) Original data GEO bulk
138 siz1-3 drought 0.50 >More info 0.50 >More info Col-0 drought Original data GEO bulk
139 sid2-2 9 hpi A. brassicicola 0.50 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
140 K starvation (shoot) 0.47 >More info 0.53 >More info Ws (shoot) Original data GEO bulk
141 cell culture 4 h phytoprostane A1 0.40 >More info 0.60 >More info cell culture 4 h control Original data GEO bulk
142 WT Shoot-Pi 0.48 >More info 0.52 >More info WT Shoot+Pi shoots Original data GEO bulk
143 Shoot -K 0.47 >More info 0.53 >More info Control-shoot Original data GEO bulk
144 Shoot -Cs 0.37 >More info 0.63 >More info Control-shoot Original data GEO bulk
145 cat2-2; 8h switch to ambient CO2 concentrations; 0.42 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
146 Col in Pi deficiency medium 0.40 >More info 0.59 >More info Col in control medium root Original data GEO bulk
147 9m.KCl 0.49 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
148 HopZ1a treated 0.46 >More info 0.53 >More info col Original data GEO bulk
149 WT-SA 0.45 >More info 0.54 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
150 35S:RPS4 eds1-2 24h -0.51 >More info -0.47 >More info 35S:RPS4 24h leaves Original data
151 edr1 18 h powdery mildew 0.51 >More info 0.47 >More info Col-0 18 h powdery mildew Original data GEO bulk
152 Selenate (root) 0.42 >More info 0.56 >More info Ws (root) Original data GEO bulk
153 1h +Pi -0.41 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
154 Root Selenate 0.42 >More info 0.56 >More info Root control 40 micromolar selenate Root Original data GEO bulk
155 Col BTH 0.31 >More info 0.67 >More info Col rosettes Original data GEO bulk
156 Leafminer damaged seedlings 0.42 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
157 Phaseolicola 2 h (leaf) 0.39 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
158 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
159 P.p 2.5hai 0.40 >More info 0.57 >More info At-Control roots Original data GEO bulk
160 HopZ1a treated ulp1c ulp1d 0.44 >More info 0.53 >More info col Original data GEO bulk
161 WT 3H Cold 0.31 >More info 0.66 >More info WT control Original data GEO bulk
162 6h volatiles Sp. HRO-C48 0.26 >More info 0.71 >More info 6h untreated whole seedling Original data GEO bulk
163 tor mutant glucose 0.45 >More info 0.52 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
164 DC3000 24h 0.41 >More info 0.56 >More info Mock 24h DC3000 Original data GEO bulk
165 Elevated CO2 AMPLE N NIGHT 0.40 >More info 0.57 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
166 seedling h S Exp -0.36 >More info -0.61 >More info seedling -S Exp seedling Original data
167 R. solani AG2-1 0.40 >More info 0.56 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
168 Laer Flg22 1h 0.52 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
169 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.44 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
170 Te ozone 0.50 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
171 rosette Light Wounded 0.43 >More info 0.53 >More info rosette Light Control Original data GEO bulk
172 35S:RPS4 eds1-2 2h -0.40 >More info -0.55 >More info 35S:RPS4 2h leaves Original data
173 Laer pretreat GA+JA Flg22 0h 0.53 >More info 0.42 >More info Laer pretreat water control leaf discs Original data GEO bulk
174 cpr5scv1 0.50 >More info 0.45 >More info WT(COL) Original data GEO bulk
175 Osmotic Stress 24 h (root) 0.58 >More info 0.37 >More info Stress mock 24 h (root) Original data Stress treatments
176 WT Col-0 Bgh inoculated 0.44 >More info 0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
177 amiRAP aerobic -0.30 >More info -0.65 >More info WT aerobic aerobic Original data GEO bulk
178 Aerobic prt6 0.33 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
179 (Col-0)+200 uM As 0.37 >More info 0.58 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
180 WT chitooctaose 0.42 >More info 0.53 >More info WT water Original data GEO bulk
181 GO5; 8h switch to ambient CO2 concentrations; 0.33 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
182 seedling -S Exp 0.31 >More info 0.64 >More info seedling FN Exp seedling Original data
183 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.54 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
184 8h-DC3000 avrRpm1 0.50 >More info 0.44 >More info 8h-DC3000 leaves Original data GEO bulk
185 Protoplast Induced 0.31 >More info 0.63 >More info Uninduced Original data GEO bulk
186 Col-0-avrB-6h 0.38 >More info 0.55 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
187 Whole root - low pH 12H 0.38 >More info 0.55 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
188 Mutant axr3-1 0.41 >More info 0.52 >More info Col Original data GEO bulk
189 root - 04% oxygen - 2h 0.11 >More info 0.82 >More info root - 21% oxygen - 2h Original data GEO bulk
190 hypoxic 0.40 >More info 0.52 >More info WT aerobic hypoxia Original data GEO bulk
191 GA 0.36 >More info 0.56 >More info none GA Rosette Original data GEO bulk
192 Dark 3day ivd 0.51 >More info 0.41 >More info 0h ivd Original data
193 root callus inducing medium 24h -0.57 >More info -0.35 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
194 dense canopy 0.30 >More info 0.62 >More info single (control) petiole Original data GEO bulk
195 cpr5npr1svi1 0.42 >More info 0.50 >More info WT(COL) Original data GEO bulk
196 estradiole-induced ANAC092 -0.37 >More info -0.54 >More info transgenic (empty vector inducible system) Original data GEO bulk
197 35S::MBF1c 0.39 >More info 0.52 >More info control Original data GEO bulk
198 Hydrogen Peroxide 500 uM 0.28 >More info 0.63 >More info Control RB and PER Hydrogen Peroxide Original data
199 BLM+INA 0.39 >More info 0.52 >More info CK BLM and INA seedling Original data
200 seedling 12h after HZE WT 0.38 >More info 0.53 >More info seedling day 1 unirradiated WT 12h Original data
201 ein3 eil1 0.50 >More info 0.41 >More info Col-0 mock Whole seedling Original data GEO bulk
202 rosettes WT drought 0.50 >More info 0.41 >More info rosettes WT watered Original data GEO bulk
203 ISOXABEN -0.41 >More info -0.50 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
204 rpoTmp(line) MLD stressed 0.50 >More info 0.40 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
205 DC3000 2 h (leaf) 0.37 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
206 K starvation (root) 0.36 >More info 0.54 >More info Ws (root) Original data GEO bulk
207 WT-NOCO2 INFECTED 0.39 >More info 0.51 >More info WT-MOCK Original data GEO bulk
208 (Ws-2)+100 uM As 0.40 >More info 0.50 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
209 S58-2 0.40 >More info 0.50 >More info wt Original data GEO bulk
210 AsAKiin11 T2 0.33 >More info 0.57 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
211 root callus inducing medium 48 h -0.55 >More info -0.34 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
212 (Col-0)+100 uM As 0.34 >More info 0.55 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
213 P.p 10.5hai 0.50 >More info 0.39 >More info At-Control roots Original data GEO bulk
214 Laer Flg22+GA 2h 0.50 >More info 0.39 >More info Laer Control leaf discs Original data GEO bulk
215 Root -K 0.36 >More info 0.53 >More info Control-root Original data GEO bulk
216 seedling 6h after HZE WT 0.38 >More info 0.51 >More info seedling day 1 unirradiated WT 6h Original data
217 WT drought 0.30 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
218 root callus inducing medium 96 h -0.54 >More info -0.34 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
219 Col-0 DCA 48h 0.33 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
220 ckh1 CK200 0.32 >More info 0.56 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
221 Laer Flg22 2h 0.50 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
222 Cor 24h 0.36 >More info 0.52 >More info Mock 24h Cor Original data GEO bulk
223 sfr3 control 0.29 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
224 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
225 cat2-short-day 4d 0.23 >More info 0.64 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
226 root - 01% oxygen - 30min 0.18 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
227 Leaf wounded 0.29 >More info 0.58 >More info Leaf control vegetative leaf Original data GEO bulk
228 plant (Col-0) 4h phytoprostane A1 0.32 >More info 0.54 >More info plant (tga2-5-6) 4h control Original data GEO bulk
229 WT 3h -P 0.30 >More info 0.56 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
230 toc1-1-53hr 0.30 >More info 0.56 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
231 SLWF infested 0.59 >More info 0.27 >More info SLWF uninfested rosette tissue Original data GEO bulk
232 AvrRpm1 2 h (leaf) 0.35 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
233 root - 08% oxygen - 30min 0.10 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
234 oas-a1.1 Cd 24h 0.23 >More info 0.63 >More info Cd 24h root Shoot Original data GEO bulk
235 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
236 -Sulfate 24 h 0.29 >More info 0.57 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
237 root - 01% oxygen - 48h 0.29 >More info 0.56 >More info root - 21% oxygen - 48h Original data GEO bulk
238 root - 08% oxygen - 2h 0.08 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
239 OsSAP11 expressing -0.35 >More info -0.50 >More info WT seedlings Original data GEO bulk
240 bHLH122 ox -0.28 >More info -0.56 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
241 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
242 4C 1h 0.23 >More info 0.61 >More info 4C 0h Original data GEO bulk
243 CLO 4mM 0.54 >More info 0.29 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
244 whole roots -Fe 48 hour 0.32 >More info 0.51 >More info whole roots standard Original data GEO bulk
245 IAA/inhibitor B Treated 0.19 >More info 0.64 >More info IAA Treated Original data GEO bulk
246 WT-Dry 0.33 >More info 0.50 >More info WT-CK dehydration treatment 1h Original data
247 Inflorescences Trp1 -0.27 >More info -0.55 >More info Inflorescences ler inflorescences Original data GEO bulk
248 npr1-3 MOCK 48h -0.27 >More info -0.54 >More info Col-0 MOCK 48h Original data GEO bulk
249 npr1-3 DCA 48h 0.29 >More info 0.52 >More info npr1-3 MOCK 48h Original data GEO bulk
250 root - 04% oxygen - 48h 0.04 >More info 0.76 >More info root - 21% oxygen - 48h Original data GEO bulk
251 root - 04% oxygen - 30min 0.08 >More info 0.72 >More info root - 21% oxygen - 30min Original data GEO bulk
252 FarRed Light 4 h 0.24 >More info 0.55 >More info White Light 4 h Original data Light treatments
253 3x(m) 0.18 >More info 0.61 >More info 2x two week old seedlings Original data
254 light-hs 0.27 >More info 0.52 >More info light-control seedling Original data
255 Col-0 48 hpi 0.52 >More info 0.26 >More info Col-0 uninoculated Original data GEO bulk
256 abi1 hypocotyl 0.18 >More info 0.59 >More info Ler hypocotyl hypocotyl Original data GEO bulk
257 GO5; 0h switch to ambient CO2 concentrations; -0.52 >More info -0.24 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
258 tunicamycin -0.24 >More info -0.52 >More info DMF Original data GEO bulk
259 Light 0.5h steady-state 0.24 >More info 0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
260 4C 2h(SOIL) 0.18 >More info 0.58 >More info 4C 0h(SOIL) Original data GEO bulk
261 phyB mutant 22C 10hrs -0.23 >More info -0.52 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
262 20h Col-0 0.24 >More info 0.51 >More info 00h Col-0 Original data GEO bulk
263 Shoot -P 0.11 >More info 0.63 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
264 Propiconazole 3 h 0.18 >More info 0.54 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
265 protoplasts T2 [flg22] 0.15 >More info 0.53 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
266 WT heat shock 0.17 >More info 0.51 >More info WT untreated above-ground parts Original data GEO bulk
267 Red/FR Light45min -0.05 >More info 0.72 >More info FarRed Light 45min Original data Light treatments
268 desiccated mature pollen grains -0.09 >More info -0.56 >More info hydrated pollen grains Original data GEO bulk
269 opr3 JA 0.5 h 0.06 >More info 0.56 >More info opr3 0 h Original data GEO bulk
270 vte2-1 1d vernalization 0.12 >More info 0.50 >More info WT 1d vernalization Original data GEO bulk
271 bri1-116 -0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
272 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
273 whole roots -Fe 6 hour 0.04 >More info 0.53 >More info whole roots standard Original data GEO bulk
274 12h volatiles Sm. R3089 -0.04 >More info -0.50 >More info 12h untreated whole seedling Original data GEO bulk
275 root longitudinal zone-1 -Fe -0.03 >More info 0.56 >More info root longitudinal zone-1 standard Original data GEO bulk
276 20m.KCl -0.02 >More info -0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
277 siliques WT hypoxia 0.51 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
278 root longitudinal zone-2 -Fe -0.03 >More info 0.55 >More info root longitudinal zone-2 standard Original data GEO bulk
279 SA 24h 0.02 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
280 root - 08% oxygen - 48h -0.09 >More info 0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
281 penta MeJA 1h 0.52 >More info -0.02 >More info Laer MeJA 1h leaf discs Original data GEO bulk
282 seed germinating in countinuous light 24h SL -0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
283 vte2 leaves 0h LT -0.06 >More info 0.50 >More info Col leaves 0h LT h 9-11th adult leaves Original data
284 Col PSTDC3000 24h 0.54 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
285 Shoot apex inflorescence (after bolting) -0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages