4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on seedling 24h after Gamma WT
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "seedling 24h after Gamma WT"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedling 24h after Gamma WT		 Correlation to
seedling 24h after Gamma WT		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedling 24h after Gamma WT 1.00 >More info 1.00 >More info seedling day 2 unirradiated WT 24h Original data
2 seedling 24h after Gamma atm-1 0.93 >More info 0.93 >More info seedling day 2 unirradiated atm-1 24h Original data
3 seedling 1.5h after Gamma WT 0.82 >More info 0.75 >More info seedling day 1 unirradiated WT 1.5h Original data
4 Night Time Treatment 0.79 >More info 0.73 >More info Night Time Control 1hr white light pulse aerial rosette Original data
5 Col-0 WT HL 3h 0.81 >More info 0.69 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
6 Day Time Treatment 0.77 >More info 0.73 >More info Day Time Control 1hr white light pulse aerial rosette Original data
7 WT-Dry 0.70 >More info 0.78 >More info WT-CK dehydration treatment 1h Original data
8 WT cold 0.76 >More info 0.71 >More info WT control All aerial tissue Original data GEO bulk
9 60m light 0.70 >More info 0.75 >More info before light whole seedlings Original data GEO bulk
10 Shoot dark control 24h -0.75 >More info -0.68 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
11 seedling 1.5h after HZE atm-1 -0.70 >More info -0.73 >More info seedling day 1 unirradiated atm-1 1.5h Original data
12 Red/FR Light 4 h -0.64 >More info -0.77 >More info FarRed Light 4 h Original data Light treatments
13 Transgenic LEC2GR Seedling 1h Dex 0.66 >More info 0.75 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
14 Shoot dark control 7h -0.74 >More info -0.67 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
15 camta1-2 -0.72 >More info -0.68 >More info Col-0-WT Original data GEO bulk
16 csn3-1 dark 0.75 >More info 0.63 >More info WT dark Original data GEO bulk
17 FarRed Light 4 h 0.56 >More info 0.79 >More info White Light 4 h Original data Light treatments
18 Col-0 DEX Shade -0.74 >More info -0.61 >More info Col-0 DEX WL seedlings Original data
19 Whole root - S 3H 0.66 >More info 0.69 >More info Whole root - S 0H Original data GEO bulk
20 penta mutant (higher order mutant) -0.73 >More info -0.62 >More info col control (higher order mutant) Original data GEO bulk
21 low CO2 + dark -0.66 >More info -0.69 >More info normal CO2 + light Original data GEO bulk
22 csn4-1 mutant 0.73 >More info 0.61 >More info WT dark Original data GEO bulk
23 Shoot submergence 24h -0.72 >More info -0.61 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
24 Blue Light 4 h 0.59 >More info 0.74 >More info White Light 4 h Original data Light treatments
25 12h volatiles Sm. R3089 -0.68 >More info -0.64 >More info 12h untreated whole seedling Original data GEO bulk
26 csn5 (csn5a-2 csn5b) dark 0.73 >More info 0.59 >More info WT dark Original data GEO bulk
27 essp4/sdg8-5 mutant 0.78 >More info 0.53 >More info wild type leaf Original data GEO bulk
28 cop1 Seedling BL+ABA 0.69 >More info 0.62 >More info WT Seedling BL+ABA Original data GEO bulk
29 seedling 1.5h after Gamma atm-1 0.70 >More info 0.61 >More info seedling day 1 unirradiated atm-1 1.5h Original data
30 WT hypoxia -0.68 >More info -0.62 >More info WT normoxia whole rosette Original data
31 30m light 0.64 >More info 0.66 >More info before light whole seedlings Original data GEO bulk
32 elf3-7-16ºC 0.63 >More info 0.67 >More info WT-16ºC Original data GEO bulk
33 Pseudomonas -0.65 >More info -0.64 >More info Control pseudomonas treated whole seedling Original data GEO bulk
34 short 12-degree- 0.52 >More info 0.76 >More info control short Original data GEO bulk
35 ahg2-1sid2-2 0.72 >More info 0.56 >More info WT (Col) control Original data GEO bulk
36 35S:LOB-GR mock 0.65 >More info 0.63 >More info Col mock mock seedling Original data GEO bulk
37 seedling 3h after Gamma WT 0.56 >More info 0.71 >More info seedling day 1 unirradiated WT 3h Original data
38 shl-2 Pool -0.68 >More info -0.59 >More info Ler Pool seedling Original data GEO bulk
39 sdg8-2 mutant 0.75 >More info 0.52 >More info wild type leaf Original data GEO bulk
40 Imidazolinone EC50 0.62 >More info 0.64 >More info Carrier (Imidazolinone) Original data GEO bulk
41 Light 4h steady-state 0.67 >More info 0.59 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
42 COL-0-Fe--shoot 0.73 >More info 0.53 >More info COL-0-Ctrl--shoot shoot Original data
43 WT (Col) glucose 0.61 >More info 0.64 >More info WT (Col) glucose seedlings Original data GEO bulk
44 Wounding Stress3 h (shoot) 0.63 >More info 0.62 >More info Stress mock 3 h (shoot) Original data Stress treatments
45 Whole root - S 12H 0.65 >More info 0.60 >More info Whole root - S 0H Original data GEO bulk
46 Col-0 DCA 6d -0.61 >More info -0.63 >More info Col-0 MOCK 6d Original data GEO bulk
47 Mutant cry1 (High Light) -0.66 >More info -0.58 >More info Col-0 (High Light) Original data GEO bulk
48 det2 light-dark -0.67 >More info -0.57 >More info det2 light light-dark Original data GEO bulk
49 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.69 >More info 0.55 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
50 short 17-degree- 0.55 >More info 0.69 >More info control short Original data GEO bulk
51 cry1 high light -0.66 >More info -0.58 >More info Col-O high light Original data GEO bulk
52 sdg2 0.71 >More info 0.52 >More info wt seedling Original data GEO bulk
53 mutant acs6E (single mutant) 0.71 >More info 0.52 >More info col control (single mutant) Original data GEO bulk
54 Light 4h polysome-bound 0.66 >More info 0.56 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
55 WT 90-105 min Xanthomonas 0.66 >More info 0.56 >More info WT T0 Original data GEO bulk
56 AmGSTF1 expressor -0.62 >More info -0.60 >More info WT leaf tissue Original data GEO bulk
57 4h decapitation 0.65 >More info 0.57 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
58 col 24h4c set4 0.65 >More info 0.56 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
59 WT resupplied Pi 4h 0.69 >More info 0.52 >More info WT complete seedlings Original data
60 sta1 0.65 >More info 0.54 >More info WT Original data GEO bulk
61 Col-O low light -0.63 >More info -0.56 >More info Col-O bule light Original data GEO bulk
62 Dark 4 h pls UV-AB 5min 0.59 >More info 0.60 >More info Dark 4 h Original data Light treatments
63 csn3-1 light 0.69 >More info 0.49 >More info WT light Original data GEO bulk
64 lht1 untreated 0.69 >More info 0.49 >More info WT untreated untreated leaf Original data GEO bulk
65 Glyphosate EC50 0.62 >More info 0.55 >More info Carrier (Glyphosate) Original data GEO bulk
66 MIL4 ox -0.60 >More info -0.57 >More info Col Original data GEO bulk
67 oas-a1.1 Cd 24h 0.55 >More info 0.61 >More info Cd 24h root Shoot Original data GEO bulk
68 exo70A1 -0.62 >More info -0.54 >More info Col-0 whole plant Original data GEO bulk
69 cca1-lhy before light -0.56 >More info -0.60 >More info before light whole seedlings Original data GEO bulk
70 L2.4 mutant 0.59 >More info 0.57 >More info Wt Original data GEO bulk
71 mutant acs9B (single mutant) -0.62 >More info -0.53 >More info col control (single mutant) Original data GEO bulk
72 cca1-lhy 30m light -0.57 >More info -0.58 >More info 30m light whole seedlings Original data GEO bulk
73 csn5 (csn5a-2 csn5b) light 0.69 >More info 0.46 >More info WT light Original data GEO bulk
74 Col-0 DCA 48h 0.60 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
75 Red Light 4 h -0.47 >More info -0.68 >More info White Light 4 h Original data Light treatments
76 35S:LOB-GR DEX 0.60 >More info 0.54 >More info Col DEX dexamethasone seedling Original data GEO bulk
77 long 10-degree- 0.56 >More info 0.58 >More info control long Original data GEO bulk
78 24h volatiles Sm. R3089 -0.53 >More info -0.61 >More info 24h untreated whole seedling Original data GEO bulk
79 npr1 sni1 ssn2 0.70 >More info 0.44 >More info npr1 sni1 water water seedling Original data GEO bulk
80 ARR22-ox 0.65 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
81 Dark 40min pls UV-AB 5min 0.50 >More info 0.63 >More info Dark 45 min Original data Light treatments
82 rosette Dark Wounded 0.48 >More info 0.65 >More info rosette Dark Control Original data GEO bulk
83 Leaf wounded 0.44 >More info 0.69 >More info Leaf control vegetative leaf Original data GEO bulk
84 camta1 leaf water -0.54 >More info -0.58 >More info Col-0 leaf water leaf Original data GEO bulk
85 hepta mutant (higher order mutant) -0.70 >More info -0.42 >More info col control (higher order mutant) Original data GEO bulk
86 high-R:FR bud axillary 0.56 >More info 0.55 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
87 gun1gun5 far-red pretreated -0.56 >More info -0.55 >More info WT far-red pretreated Original data GEO bulk
88 seedling 24h after HZE WT 0.34 >More info 0.77 >More info seedling day 2 unirradiated WT 24h Original data
89 max3GR24 (1 uM) 0.60 >More info 0.51 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
90 mil4 sid2 -0.54 >More info -0.57 >More info Col rosettes Original data GEO bulk
91 long 12-degree- 0.51 >More info 0.60 >More info control long Original data GEO bulk
92 erf104-ko H2O 4h 0.58 >More info 0.53 >More info Col-0 H2O 4h Original data GEO bulk
93 WT 24h cold 0.55 >More info 0.55 >More info WT warm 24h cold entire aerial part Original data GEO bulk
94 Whole root - S 24H 0.54 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
95 essp3/brm5 mutant 0.63 >More info 0.47 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
96 mutant acs2B (single mutant) 0.67 >More info 0.43 >More info col control (single mutant) Original data GEO bulk
97 nia1nia2noa1-2 0.62 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
98 detached inflorescences 24h -0.65 >More info -0.44 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
99 AtLysM RLK1 mutant water 0.57 >More info 0.52 >More info WT water Original data GEO bulk
100 Apex mir-3TCP 14DAS 0.60 >More info 0.49 >More info Apex Col 14DAS Original data GEO bulk
101 long 17-degree- 0.38 >More info 0.71 >More info control long Original data GEO bulk
102 mutant acs2C (single mutant) -0.58 >More info -0.50 >More info col control (single mutant) Original data GEO bulk
103 Selenate (root) 0.54 >More info 0.54 >More info Ws (root) Original data GEO bulk
104 Root Selenate 0.54 >More info 0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
105 ahg2-1 0.64 >More info 0.44 >More info WT (Col) control Original data GEO bulk
106 35S:GIF -0.66 >More info -0.42 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
107 4C 24h 0.50 >More info 0.58 >More info 4C 0h Original data GEO bulk
108 B.cinerea 18 h infection 0.59 >More info 0.49 >More info Mock 18 h Original data Botrytis cinerea infection
109 Botrytis cinerea 18h 0.59 >More info 0.49 >More info control 18h Original data GEO bulk
110 Heat no recovery 0.65 >More info 0.42 >More info Mock no recovery seedling Original data GEO bulk
111 camta1/2 warm -0.56 >More info -0.51 >More info WT 24h cold entire aerial part Original data GEO bulk
112 Col-7 Sucrose 0.59 >More info 0.48 >More info col-7 Original data GEO bulk
113 ptpks2 0.38 >More info 0.69 >More info Col-WT leaves Original data GEO bulk
114 ws 24h4c q8ws 0.61 >More info 0.45 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
115 3x(p) -0.65 >More info -0.41 >More info 2x two week old seedlings Original data
116 Col(gl) leaf 100mM NaCl -0.63 >More info -0.43 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
117 Col(gl) 100mM NaCl -0.63 >More info -0.43 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
118 Light 0.5h polysome-bound 0.43 >More info 0.63 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
119 sid2 -0.48 >More info -0.58 >More info Col rosettes Original data GEO bulk
120 TaFLS overexpression line (OE2) -0.48 >More info -0.58 >More info Col-0 Rosette leaves Original data
121 ga1-3 scl3-1 0.54 >More info 0.51 >More info ga1-3 whole root Original data
122 long 8-degree- 0.53 >More info 0.52 >More info control long Original data GEO bulk
123 PNO8 12 h -0.51 >More info -0.54 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
124 ein2 1% sucrose 14-day-old 0.62 >More info 0.43 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
125 Dark 6h wt -0.65 >More info -0.40 >More info 0h wt Original data
126 FarRed Light 45min -0.32 >More info -0.73 >More info White Light 45min Original data Light treatments
127 long 14-degree- 0.44 >More info 0.61 >More info control long Original data GEO bulk
128 swn-7 -0.58 >More info -0.47 >More info Col whole plant Original data GEO bulk
129 35S::HRE2 Aerobic -0.48 >More info -0.57 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
130 Col leaves 48h LT 0.56 >More info 0.48 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
131 WT Na2S 0.55 >More info 0.49 >More info WT water Na2S leaf Original data GEO bulk
132 R. solani AG2-1 0.53 >More info 0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
133 petiole in FRD -0.61 >More info -0.43 >More info petiole in WL petioles Original data GEO bulk
134 CHLD reduction 0.64 >More info 0.40 >More info Col-0 dex green tissue Original data GEO bulk
135 sav3-2 light 0.56 >More info 0.48 >More info Col-0 light seedlings Original data GEO bulk
136 tcp14 -0.52 >More info -0.52 >More info WT inflorescences Original data GEO bulk
137 Mutant sav3-2 (WL) 0.56 >More info 0.48 >More info Col-0 (WL) Original data GEO bulk
138 cdpk6-yfp 0.49 >More info 0.55 >More info Kan seedlings Original data GEO bulk
139 Dark 6h ivd -0.61 >More info -0.42 >More info 0h ivd Original data
140 sfr2 control 0.58 >More info 0.45 >More info WT control All aerial tissue Original data GEO bulk
141 Dark 40 min pls UV-A 5 min 0.41 >More info 0.62 >More info Dark 45 min Original data Light treatments
142 Dark 6h hml -0.67 >More info -0.35 >More info 0h hml Original data
143 0h light (+Lincomycin) 0.55 >More info 0.47 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
144 amiR-tor induced 3d 0.50 >More info 0.52 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
145 leaf blade in FRD -0.58 >More info -0.44 >More info leaf blade in WL leaf blades Original data GEO bulk
146 WT Red light 1h 0.45 >More info 0.57 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
147 NJ15 0.26 >More info 0.76 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
148 toc1-1-85hr 0.47 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
149 35S::PI ap3-3 35S::AP-GR +DEX 0.32 >More info 0.69 >More info 0hr DEX Original data GEO bulk
150 GV3101 3hpi -0.43 >More info -0.57 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
151 2d dark-grown WT(Col-0)/1 hr red light 0.46 >More info 0.54 >More info 2d dark-grown WT seedling Original data GEO bulk
152 Leaf systemic 0.39 >More info 0.61 >More info Leaf control vegetative leaf Original data GEO bulk
153 Ibuprofen 3 h 0.61 >More info 0.38 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
154 MYB29 OE 0.58 >More info 0.41 >More info WT for MYB29/76 Original data GEO bulk
155 Propiconazole 3 h 0.53 >More info 0.46 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
156 CHLM overexpression 0.58 >More info 0.41 >More info Col-0 estr green tissue Original data GEO bulk
157 sfr3 control 0.61 >More info 0.38 >More info WT control All aerial tissue Original data GEO bulk
158 Genotoxic Stress 3 h (shoot) 0.32 >More info 0.67 >More info Stress mock 3 h (shoot) Original data Stress treatments
159 COL-0-Fe--root 0.62 >More info 0.36 >More info COL-0-Ctrl--root root Original data
160 1 h Light Total RNA 0.61 >More info 0.37 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
161 WT powdery mildew 0.55 >More info 0.43 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
162 ATR1 OE -0.60 >More info -0.38 >More info WT for ATR1/MYB51 Original data GEO bulk
163 csn4-1 dark 0.57 >More info 0.41 >More info WT light Original data GEO bulk
164 pXVE:HA-EDM2-a untreated -0.46 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
165 Col-0 shade -0.47 >More info -0.51 >More info Col-0 light seedlings Original data GEO bulk
166 seedling 1.5h after HZE WT -0.57 >More info -0.40 >More info seedling day 1 unirradiated WT 1.5h Original data
167 pnp1-1 1wk +P 0.55 >More info 0.42 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
168 MG132 3 h 0.57 >More info 0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
169 gai Flg22 2h -0.54 >More info -0.43 >More info Laer Flg22 2h leaf discs Original data GEO bulk
170 short 14-degree- 0.51 >More info 0.46 >More info control short Original data GEO bulk
171 Col-0 (t-zeatin 3 h) 0.56 >More info 0.41 >More info Col-0 Original data Cytokinin treatment of seedlings
172 toc1-1-81hr 0.40 >More info 0.57 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
173 apum23 0.47 >More info 0.50 >More info WT (Col-3) aerial parts Original data GEO bulk
174 Dark 1day hml -0.60 >More info -0.36 >More info 0h hml Original data
175 rGRF3x35S:GIF -0.65 >More info -0.31 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
176 Col leaves 120h LT 0.51 >More info 0.45 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
177 35SpBVR3 -0.53 >More info -0.43 >More info WT Original data GEO bulk
178 Dark 1day wt -0.59 >More info -0.37 >More info 0h wt Original data
179 Mutant nph4-1_arf19-1 0.42 >More info 0.54 >More info Col Original data GEO bulk
180 UV 0.46 >More info 0.50 >More info WT aerial region Original data GEO bulk
181 rao2 H2O2 3h -0.46 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
182 Ws-2 high light 0.46 >More info 0.50 >More info Ws-2 low light Original data GEO bulk
183 Dark 1day ivd -0.58 >More info -0.37 >More info 0h ivd Original data
184 spx1 spx2 complete 0.64 >More info 0.31 >More info WT complete seedlings Original data
185 Whole root - S 48H 0.53 >More info 0.42 >More info Whole root - S 0H Original data GEO bulk
186 IRP1-OE-Ctrl--shoot 0.63 >More info 0.32 >More info COL-0-Ctrl--shoot shoot Original data
187 phyABDE Rc50 0.44 >More info 0.51 >More info phyABDE Dark red light whole seedling Original data GEO bulk
188 mil4 -0.43 >More info -0.52 >More info Col rosettes Original data GEO bulk
189 Root submergence 7h -0.54 >More info -0.40 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
190 Bay-0-3h IAA -0.62 >More info -0.32 >More info Bay-0-0h IAA whole plant Original data GEO bulk
191 cca1-lhy 15m light -0.50 >More info -0.44 >More info 15m light whole seedlings Original data GEO bulk
192 PRR5-VP 6h light on 0.58 >More info 0.36 >More info WT 6h light on whole plant Original data GEO bulk
193 inhibitor A Treated 0.41 >More info 0.53 >More info Negative Control Original data GEO bulk
194 ape2 high light -0.44 >More info -0.50 >More info Ws-2 high light Original data GEO bulk
195 seedling SPL13 -0.54 >More info -0.39 >More info seedling Col-0 Original data GEO bulk
196 eto1-4 + AVG -0.55 >More info -0.38 >More info eto1-4 whole seedling Original data GEO bulk
197 nia1nia2 0.53 >More info 0.40 >More info Col-0 whole seedlings Original data GEO bulk
198 Dark 44min pls RedLigh 1min 0.36 >More info 0.57 >More info Dark 45 min Original data Light treatments
199 DVL4 induced -0.51 >More info -0.41 >More info emptyvectordex Original data GEO bulk
200 Leaf GLU1-KO 0.50 >More info 0.42 >More info Leaf Col(0) rosette leaves Original data GEO bulk
201 root cap pGL2 8h BL -0.51 >More info -0.41 >More info root cap pGL2 0h BL brassinosteroid root Original data
202 WT+sucrose 0.42 >More info 0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
203 lht1 PstDC3000 48h 0.64 >More info 0.27 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
204 A2hsfa1-ox in quadruple mutant 0.50 >More info 0.41 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
205 35S::MBF1c -0.58 >More info -0.33 >More info control Original data GEO bulk
206 WT mitomycin C 0.57 >More info 0.34 >More info WT mock shoot apical meristem Original data
207 rGRF -0.61 >More info -0.30 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
208 Mutant sav3-2 (SH) 0.41 >More info 0.50 >More info Col-0 (SH) Original data GEO bulk
209 sav3-2 shade 0.41 >More info 0.50 >More info Col-0 shade seedlings Original data GEO bulk
210 ga1-3/brm-1 0.52 >More info 0.38 >More info wt shoots Original data GEO bulk
211 Differentiation 12h 0.53 >More info 0.37 >More info Differentiation 0h leaves Original data
212 SPT4-R3 seedlings0 DAS 0.51 >More info 0.39 >More info Col-0 seedlings0 DAS seedlings Original data
213 naxillin 3h 0.55 >More info 0.35 >More info before treatment naxillin root Original data GEO bulk
214 inhibitor B Treated 0.50 >More info 0.40 >More info Negative Control Original data GEO bulk
215 E.orontii Infection 3 day -0.39 >More info -0.51 >More info Uninfection 3 day Original data Elicitor treatments
216 WT chitooctaose 0.39 >More info 0.51 >More info WT water Original data GEO bulk
217 Root dark control 7h -0.51 >More info -0.38 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
218 WOX1-1 -0.50 >More info -0.39 >More info Col-0 aerial part Original data
219 sex1-3 -0.36 >More info -0.53 >More info Col-WT leaves Original data GEO bulk
220 Shoot -Cs 0.39 >More info 0.50 >More info Control-shoot Original data GEO bulk
221 Root submergence 24h -0.54 >More info -0.34 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
222 ein3 eil1 JA 0.53 >More info 0.35 >More info JA Whole seedling Original data GEO bulk
223 Mutant cry1 -0.53 >More info -0.35 >More info Col-0 Original data GEO bulk
224 cry1 low light -0.53 >More info -0.35 >More info Col-O low light Original data GEO bulk
225 35S:VND7-VP16-GR+CHX 0.27 >More info 0.61 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
226 Light 0.5h steady-state 0.26 >More info 0.62 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
227 ebs Pool -0.59 >More info -0.29 >More info Ler Pool seedling Original data GEO bulk
228 Root dark control 24h -0.55 >More info -0.32 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
229 amiR-tor induced 6d 0.56 >More info 0.31 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
230 CDB1-Knockout -0.34 >More info -0.53 >More info WT Original data GEO bulk
231 WT Red light 18h 0.50 >More info 0.37 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
232 6-trichlorophenoxyacetic acid 3 h 0.57 >More info 0.30 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
233 cs26 short-day 0.52 >More info 0.34 >More info Leaves-WT-SD leaf Original data GEO bulk
234 CHS-silenced type -0.56 >More info -0.30 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
235 pmr4-1 control 0.53 >More info 0.33 >More info WT control uninoculated Original data GEO bulk
236 dcl1-7 0.53 >More info 0.33 >More info Ler Original data GEO bulk
237 M6PR transgenic leaf 0mM NaCl -0.53 >More info -0.33 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
238 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
239 piffq FR 1h 0.58 >More info 0.28 >More info WT FR 1h whole seedling Original data GEO bulk
240 9 hr Hypoxia 1 hr recovery Total RNA 0.35 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
241 Col-0 root drought 0.51 >More info 0.34 >More info Col-0 root water root Original data GEO bulk
242 WT salt 12 h 0.56 >More info 0.29 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
243 PAHs stress 0.50 >More info 0.35 >More info exp control phenanthrene whole plants Original data GEO bulk
244 pGL1::GL1-GR Dex 24hours -0.26 >More info -0.59 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
245 hen1 0.55 >More info 0.28 >More info Ler Original data GEO bulk
246 Leafminer systemically damaged thaliana seedlings -0.53 >More info -0.30 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
247 leaf blade in D -0.56 >More info -0.27 >More info leaf blade in WL leaf blades Original data GEO bulk
248 Mutant iaa5_6_19 0.33 >More info 0.50 >More info Col Original data GEO bulk
249 gpa1-4/agb1-2 clean-air 3h -0.57 >More info -0.26 >More info Col clean-air 3h clean-air Original data GEO bulk
250 Apex mir-319b 17DAS 0.62 >More info 0.21 >More info Apex Col 14DAS Original data GEO bulk
251 petiole in D -0.53 >More info -0.29 >More info petiole in WL petioles Original data GEO bulk
252 Cd 18h root 0.51 >More info 0.30 >More info WT-Untreated Root Original data GEO bulk
253 tmm1-inflorescence-tips 0.31 >More info 0.50 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
254 ga1-3 SCL3OE 0.53 >More info 0.27 >More info ga1-3 whole root Original data
255 NAA 3h 0.53 >More info 0.26 >More info before treatment NAA root Original data GEO bulk
256 BLM 0.25 >More info 0.54 >More info CK BLM seedling Original data
257 ein2-1 +elf18 2h 0.55 >More info 0.23 >More info WT +elf18 2h elf18 Original data GEO bulk
258 hog1-7 0.53 >More info 0.24 >More info wt whole seedling Original data GEO bulk
259 mutant-line774 0.53 >More info 0.24 >More info WT-control whole plant Original data GEO bulk
260 Shoot apex inflorescence (after bolting) 0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
261 ein2-1 untreated 0.53 >More info 0.23 >More info WT untreated untreated Original data GEO bulk
262 rao1-2 0.51 >More info 0.25 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
263 aba2 1% sucrose 12-day-old -0.55 >More info -0.21 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
264 hexa mutant (higher order mutant) -0.52 >More info -0.23 >More info col control (higher order mutant) Original data GEO bulk
265 low water potential 0.52 >More info 0.23 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
266 1h +Pi -0.21 >More info -0.54 >More info 1h -Pi root Original data GEO bulk
267 Mutant bri1 -0.56 >More info -0.18 >More info Ws-2 Original data Comparison of plant hormone related mutant
268 M6PR transgenic 0mM NaCl -0.54 >More info -0.19 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
269 rosette leaves fdh -0.59 >More info -0.14 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
270 sfr6 control 0.55 >More info 0.18 >More info WT control All aerial tissue Original data GEO bulk
271 Mock pft1 leaf 0.54 >More info 0.19 >More info Mock Col-0 leaf water leaf Original data GEO bulk
272 10min Reillumination IP RNA -0.16 >More info -0.55 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
273 mutant-line1135 0.51 >More info 0.20 >More info WT-control whole plant Original data GEO bulk
274 ddm1-12 0.51 >More info 0.20 >More info wt whole seedling Original data GEO bulk
275 tfl1-1-23ºC -0.57 >More info -0.13 >More info WT-23ºC Original data GEO bulk
276 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
277 tcp13 -0.53 >More info -0.16 >More info WT inflorescences Original data GEO bulk
278 Shoot submergence 7h -0.69 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
279 efr-1 untreated 0.51 >More info 0.18 >More info WT untreated untreated Original data GEO bulk
280 tetraploid -0.53 >More info -0.15 >More info diploid Original data GEO bulk
281 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
282 BI-1-1h IAA 0.51 >More info 0.14 >More info BI-1-0h IAA whole plant Original data GEO bulk
283 miR mutant (higher order mutant) -0.50 >More info -0.15 >More info col control (higher order mutant) Original data GEO bulk
284 Total RNA 35S:HF-RPL18 0.54 >More info 0.11 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
285 C24 24h cold 0.50 >More info 0.15 >More info Col 24h cold leaf Original data GEO bulk
286 Laer pretreat GA Flg22 1h -0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
287 npr1 sni1 brca2a 0.53 >More info 0.11 >More info npr1 sni1 water water seedling Original data GEO bulk
288 nrpe1 -0.62 >More info -0.02 >More info WT Original data
289 Col0-PsmES4326-24hpi 0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
290 abi1 hypocotyl 0.09 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
291 AtMinD1 Prolonged-induction -0.52 >More info -0.11 >More info Control whole plant Original data GEO bulk
292 atm3 0.01 >More info -0.64 >More info Col0 whole plant Original data GEO bulk
293 Col-0 mbs1-1 HL 0h 0.50 >More info 0.12 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
294 6h volatiles Sp. HRO-C48 -0.54 >More info -0.06 >More info 6h untreated whole seedling Original data GEO bulk
295 Apex octa 18DAS 0.51 >More info 0.09 >More info Apex Col 14DAS Original data GEO bulk
296 etiolated cop1 0.52 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
297 seedling 24h after HZE atm-1 -0.08 >More info 0.64 >More info seedling day 2 unirradiated atm-1 24h Original data
298 pab polysome 0.62 >More info -0.07 >More info WT polysome seedling shoot/aerial seedling Original data
299 mdh -0.01 >More info -0.53 >More info Col Original data GEO bulk
300 seedling 3h after HZE WT -0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
301 opr3 OPDA 0.5 h -0.13 >More info 0.65 >More info opr3 0 h Original data GEO bulk
302 WT 3H Cold -0.07 >More info 0.58 >More info WT control Original data GEO bulk
303 21h-DC3000 avrRpm1 -0.01 >More info 0.51 >More info 21h-DC3000 leaves Original data GEO bulk
304 6h +Pi 0.04 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
305 Heat shock optimum -0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
306 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
307 npr1 sni1 SA -0.57 >More info 0.07 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
308 Protoplast Induced -0.03 >More info 0.52 >More info Uninduced Original data GEO bulk
309 Col BTH -0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
310 piffq 2d WL 0.52 >More info -0.06 >More info WT 2d WL whole seedling Original data GEO bulk
311 scl3 0.55 >More info -0.10 >More info Col-0 whole root Original data GEO bulk
312 Red/FR Light45min -0.08 >More info 0.51 >More info FarRed Light 45min Original data Light treatments
313 phyABCDE Dark 0.52 >More info -0.10 >More info WT Dark Dark whole seedling Original data GEO bulk
314 4C 1h -0.18 >More info 0.55 >More info 4C 0h Original data GEO bulk
315 opr3 JA 0.5 h -0.13 >More info 0.50 >More info opr3 0 h Original data GEO bulk
316 JMJ24 knockout 0.51 >More info -0.15 >More info WT Original data GEO bulk
317 siliques AtHb1 control -0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
318 P.syringae vir 4 h (leaf) 0.19 >More info -0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
319 Leafminer damaged seedlings -0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk