4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on hrcC
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List of experiments correlated with "hrcC"  Help Download transcriptome of top 30
Score Experiment Correlation from
hrcC
Correlation to
hrcC
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 hrcC 1.00 >More info 1.00 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
2 hrpA 7h 0.88 >More info 0.88 >More info Mock 7h hrpA Original data GEO bulk
3 col-5 hrpA 12h 0.85 >More info 0.88 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
4 35S::ERF104 Flg22 4h 0.85 >More info 0.88 >More info 35S::ERF104 H2O 4h Original data GEO bulk
5 hrpA fliC 7h 0.88 >More info 0.83 >More info Mock 7h hrpA fliC Original data GEO bulk
6 Flagellin 4 h (leaf) 0.84 >More info 0.87 >More info Mock 4 h (leaf) Original data Elicitor treatments
7 E.coli TUV86 2 fliC 7h 0.85 >More info 0.85 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
8 mpk6-ko Flg22 4h 0.83 >More info 0.87 >More info mpk6-ko H2O 4h Original data GEO bulk
9 GST NPP1 4 h (leaf) 0.84 >More info 0.85 >More info Mock 4 h (leaf) Original data Elicitor treatments
10 E.coli 0157 H7 7h 0.84 >More info 0.83 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
11 erf104-ko Flg22 4h 0.82 >More info 0.85 >More info erf104-ko H2O 4h Original data GEO bulk
12 Phaseolicola 2 h (leaf) 0.80 >More info 0.85 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
13 GST 4 h (leaf) 0.76 >More info 0.88 >More info Mock 4 h (leaf) Original data Elicitor treatments
14 ulp1c ulp1d +Pto 0.82 >More info 0.82 >More info ulp1c ulp1d mock Original data GEO bulk
15 Cor hrpS 10h 0.84 >More info 0.79 >More info Mock 10h Cor hrpS Original data GEO bulk
16 col-5 DC3000 12h 0.79 >More info 0.83 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
17 ataf1-1 mutant Col-0 Bgh inoculated 0.80 >More info 0.82 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
18 HopZ1a treated 0.82 >More info 0.80 >More info col Original data GEO bulk
19 WT Col-0 Bgh inoculated 0.80 >More info 0.81 >More info WT Col-0 Un-inoculated Original data GEO bulk
20 col-5 hrpA 2h 0.77 >More info 0.84 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
21 AvrRpt2 Col-0 6hpi 0.83 >More info 0.77 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
22 Col-0 Flg22 4h 0.75 >More info 0.85 >More info Col-0 H2O 4h Original data GEO bulk
23 DC3000 2 h (leaf) 0.78 >More info 0.82 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
24 Col whole leaf 7dpi 0.80 >More info 0.80 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
25 HopZ1a treated ulp1c ulp1d 0.82 >More info 0.78 >More info col Original data GEO bulk
26 pepr1-1 Pepr2-3 +Pep2 2h -0.82 >More info -0.78 >More info WT +Pep2 2h Pep2 Original data GEO bulk
27 efr-1 +elf18 10h -0.80 >More info -0.79 >More info WT +elf18 10h elf18 Original data GEO bulk
28 WT 2-4h Xanthomonas 0.78 >More info 0.80 >More info WT T0 Original data GEO bulk
29 Col whole leaf 5dpi 0.79 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
30 col-5 hrpA 4h 0.78 >More info 0.79 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
31 Col-0 9 hpi A. brassicicola 0.80 >More info 0.77 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
32 WT flg22 2h 0.77 >More info 0.80 >More info WT 0h Leaf tissue Original data GEO bulk
33 col-5 DC3000 4h 0.72 >More info 0.84 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
34 Laer Flg22 2h 0.78 >More info 0.78 >More info Laer Control leaf discs Original data GEO bulk
35 Lipopolysaccaride4 h (leaf) 0.77 >More info 0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
36 WT +elf18 2h 0.80 >More info 0.75 >More info WT untreated elf18 Original data GEO bulk
37 flu over-tAPX 0.77 >More info 0.78 >More info WT Col Original data GEO bulk
38 Col ozone 3h 0.71 >More info 0.84 >More info Col clean-air 3h ozone Original data GEO bulk
39 seedlings protease IV 0.78 >More info 0.76 >More info seedlings nontreated control whole seedling Original data
40 anac017-2 AntimycinA 3h -0.75 >More info -0.79 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
41 col-5 DC3000-avrRpm 4h 0.76 >More info 0.78 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
42 Laer Flg22 1h 0.76 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
43 ein2-1 9 hpi A. brassicicola 0.79 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 miR393 flg22 2h 0.78 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
45 Col-0-avrB-6h 0.76 >More info 0.77 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
46 flu 0.77 >More info 0.75 >More info WT Col Original data GEO bulk
47 IMI 4mM 0.79 >More info 0.73 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
48 del1-1 mutant 5d uninfected 0.75 >More info 0.76 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
49 WT NAA/flg 2h 0.77 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
50 WT-SA 0.76 >More info 0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
51 pmr5 pmr6 0.75 >More info 0.75 >More info Col-0 Original data GEO bulk
52 WT +elf18 10h 0.80 >More info 0.70 >More info WT untreated elf18 Original data GEO bulk
53 Laer Flg22+GA 2h 0.76 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
54 Pto inoculated 0.79 >More info 0.71 >More info col Original data GEO bulk
55 Laer Flg22+GA 1h 0.75 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
56 Laer treat paclobutrazol (PAC) 0.75 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
57 AvrRpm1 2 h (leaf) 0.68 >More info 0.80 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
58 Leafminer locally damaged thaliana seedlings 0.78 >More info 0.70 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
59 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.82 >More info 0.66 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
60 WT flg22 1h 0.73 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
61 +1.6 mM Tween 20 1 h. 0.72 >More info 0.76 >More info +distilled water 1 h. Original data GEO bulk
62 coi1-16 ein2 sid2 ctrl -0.83 >More info -0.65 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
63 35S:RPS4 eds1-2 8h -0.75 >More info -0.73 >More info 35S:RPS4 8h leaves Original data
64 sid2-2 9 hpi A. brassicicola 0.76 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
65 B.cinerea 18 h infection 0.75 >More info 0.73 >More info Mock 18 h Original data Botrytis cinerea infection
66 Botrytis cinerea 18h 0.75 >More info 0.73 >More info control 18h Original data GEO bulk
67 Seedling KUA1-IOX est 0.70 >More info 0.77 >More info Seedling KUA1-IOX mock Original data
68 AFB1 flg22 2h 0.78 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
69 tunicamycin -0.75 >More info -0.72 >More info DMF Original data GEO bulk
70 WT-NOCO2 INFECTED 0.76 >More info 0.71 >More info WT-MOCK Original data GEO bulk
71 Cor 10h 0.74 >More info 0.73 >More info Mock 10h Cor Original data GEO bulk
72 ice1 control 0.70 >More info 0.76 >More info WT control Original data GEO bulk
73 Shoot -Cs 0.65 >More info 0.81 >More info Control-shoot Original data GEO bulk
74 WT Bc inoculation 14h 0.81 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
75 Pst-DC3000(avrRpm1)-4hpi 0.69 >More info 0.77 >More info Pst-DC3000-4hpi Original data GEO bulk
76 Te ozone 0.81 >More info 0.65 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
77 DFPM 0.73 >More info 0.73 >More info control Original data GEO bulk
78 pvip1 pvip2 0.76 >More info 0.70 >More info Col-0 whole rosettes Original data GEO bulk
79 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.81 >More info 0.64 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
80 bio4-1 mutant leaves 0.65 >More info 0.80 >More info WT leaves leaves Original data GEO bulk
81 35S:RPS4 eds1-2 24h -0.73 >More info -0.72 >More info 35S:RPS4 24h leaves Original data
82 WT NAA/flg 1h 0.73 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
83 Botrytis cinerea 48h 0.76 >More info 0.69 >More info control 48h Original data GEO bulk
84 Col-0 ozone 0.82 >More info 0.63 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
85 AFB1 flg22 1h 0.71 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
86 DC3000 7h 0.67 >More info 0.77 >More info Mock 7h DC3000 Original data GEO bulk
87 CT101 ozone 0.80 >More info 0.64 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
88 miR393 flg22 1h 0.69 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
89 AgNO3 3 h 0.76 >More info 0.67 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
90 WT AntimycinA 3h 0.70 >More info 0.73 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
91 Col-Luc WT 3h antimycin A 0.70 >More info 0.73 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
92 DC3000 hrcC 2 h (leaf) 0.66 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
93 CMP 24hr 0.72 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
94 npr1-1 SA -0.78 >More info -0.63 >More info Col-0 SA complete seedling Original data
95 C24 ozone 0.80 >More info 0.61 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
96 WT roots - Fe 0.66 >More info 0.75 >More info WT roots + Fe Roots Original data GEO bulk
97 Dex-rga(delta17) 4h GA4+DEX -0.70 >More info -0.71 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
98 coi1-16 ein2 sid2 ozone 0.82 >More info 0.59 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
99 wrky33 Bc inoculation 14h 0.79 >More info 0.61 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
100 rosette Light Wounded 0.68 >More info 0.72 >More info rosette Light Control Original data GEO bulk
101 Fenclorim 4hr 0.69 >More info 0.71 >More info Acetone 4hr root Original data GEO bulk
102 seedlings-week-old RECA1-overexpressing
transgenic
0.69 >More info 0.71 >More info seedlings-week-old Col-0 seedlings Original data
103 Col0-PsmES4326-24hpi 0.79 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
104 penta Alternaria 3dpi 0.75 >More info 0.65 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
105 msh1 albino 0.71 >More info 0.68 >More info WT aerial part Original data GEO bulk
106 S58-2 0.68 >More info 0.71 >More info wt Original data GEO bulk
107 gh3.5-1D 48 hpi 0.72 >More info 0.67 >More info Col-0 uninoculated Original data GEO bulk
108 WT powdery mildew 0.72 >More info 0.67 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
109 mkk1/mkk2 control rep 0.73 >More info 0.66 >More info Col-0 Time 0 rep Original data GEO bulk
110 mkk1/mkk2 24h BTH rep 0.72 >More info 0.67 >More info Col-0 24h BTH rep Original data GEO bulk
111 DC3000 24h 0.71 >More info 0.68 >More info Mock 24h DC3000 Original data GEO bulk
112 CMP 4hr 0.70 >More info 0.69 >More info Acetone 4hr root Original data GEO bulk
113 SLWF infested 0.69 >More info 0.70 >More info SLWF uninfested rosette tissue Original data GEO bulk
114 Elevated CO2 AMPLE N NIGHT 0.65 >More info 0.73 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
115 cpr5scv1 0.72 >More info 0.66 >More info WT(COL) Original data GEO bulk
116 pad4-PsmES4326-24hpi -0.71 >More info -0.67 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
117 ice1 6H Cold 0.69 >More info 0.69 >More info WT 6H Cold Original data GEO bulk
118 Mutant gh3.5-1D (AvrRpt2) 0.66 >More info 0.72 >More info Col-0 (AvrRpt2) Original data GEO bulk
119 Sulfometuron EC50 0.73 >More info 0.65 >More info Carrier Original data GEO bulk
120 Laer pretreat GA Flg22 1h 0.66 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
121 dde2-2 9 hpi A. brassicicola 0.71 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
122 pnp1-1 3h +P 0.71 >More info 0.66 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
123 ceh1 mutant 0.72 >More info 0.65 >More info Parent line Original data
124 Cycloheximide 3 h 0.68 >More info 0.69 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
125 Col-0 C2H4 24h 0.68 >More info 0.69 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
126 oligomycin 4 h 0.68 >More info 0.68 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
127 bak1-3 +Pep2 10h 0.68 >More info 0.68 >More info WT +Pep2 10h Pep2 Original data GEO bulk
128 rosette Dark Wounded 0.66 >More info 0.70 >More info rosette Dark Control Original data GEO bulk
129 eds16 whole leaf 5dpi -0.67 >More info -0.69 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
130 chito-octamer 0.63 >More info 0.72 >More info Col Mock Original data GEO bulk
131 CMV-WT 0.72 >More info 0.63 >More info Mock-At Aerial tissues Original data GEO bulk
132 pho1 0.64 >More info 0.71 >More info Col2WT Original data GEO bulk
133 pmr5 0.65 >More info 0.70 >More info Col-0 Original data GEO bulk
134 petiole in D 0.66 >More info 0.69 >More info petiole in WL petioles Original data GEO bulk
135 PAHs stress 0.72 >More info 0.63 >More info exp control phenanthrene whole plants Original data GEO bulk
136 Leafminer damaged seedlings 0.78 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
137 smg7b-1 0.72 >More info 0.62 >More info WT whole plant Original data GEO bulk
138 cpr5npr1svi1 0.63 >More info 0.71 >More info WT(COL) Original data GEO bulk
139 SA 4mM 0.75 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
140 Col-0 under 4 days salt 0.72 >More info 0.61 >More info Col-0 under control 4 days salt treatment rosette Original data
141 Mutant siz1-3 (Drought) 0.71 >More info 0.62 >More info Col-0 (Drought) Original data GEO bulk
142 siz1-3 drought 0.71 >More info 0.62 >More info Col-0 drought Original data GEO bulk
143 safener treated 0.66 >More info 0.67 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
144 S15-118 0.67 >More info 0.66 >More info wt Original data GEO bulk
145 Wounding Stress3 h (shoot) 0.65 >More info 0.67 >More info Stress mock 3 h (shoot) Original data Stress treatments
146 WT+chitooctaose 0.62 >More info 0.70 >More info WT+water chitooctaose seedlings Original data GEO bulk
147 ice1 3H Cold 0.72 >More info 0.59 >More info WT 3H Cold Original data GEO bulk
148 pnp1-1 1wk +P 0.72 >More info 0.59 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
149 camta1/2/3 warm 0.70 >More info 0.61 >More info WT warm entire aerial part Original data GEO bulk
150 aerial organ callus inducing medium 96 h 0.65 >More info 0.66 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
151 Col leaves 48h LT 0.62 >More info 0.68 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
152 Col-0 low oxygen 0.67 >More info 0.63 >More info Col-0 Original data GEO bulk
153 miR393 0h -0.63 >More info -0.67 >More info WT 0h Leaf tissue Original data GEO bulk
154 LTN008-2 aza-dc 0.74 >More info 0.56 >More info LTN012-2 Mock Original data
155 Col whole leaf amplified 5 dpi 0.68 >More info 0.62 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
156 ARR22-ox (t-zeatin 3 h) 0.74 >More info 0.56 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
157 P.syringae AvrRpt2 4 h (leaf) 0.61 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
158 Laer Alternaria 3dpi -0.63 >More info -0.66 >More info Laer Control leaf discs Original data GEO bulk
159 abh1 -ABA 0.60 >More info 0.69 >More info Col-0 -ABA Original data GEO bulk
160 Cor 24h 0.70 >More info 0.59 >More info Mock 24h Cor Original data GEO bulk
161 mkk2 24h BTH rep 0.62 >More info 0.66 >More info Col-0 24h BTH rep Original data GEO bulk
162 ice1 24H Cold 0.67 >More info 0.61 >More info WT 24H Cold Original data GEO bulk
163 cpr5 0.68 >More info 0.60 >More info WT seedling Original data GEO bulk
164 lht1 PstDC3000 48h 0.66 >More info 0.62 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
165 chito-tetramer 0.59 >More info 0.69 >More info Col Mock Original data GEO bulk
166 Mature callus 0.69 >More info 0.59 >More info Young callus hypocotyls Original data GEO bulk
167 UV 0.71 >More info 0.57 >More info WT aerial region Original data GEO bulk
168 sid2-1 cold -0.69 >More info -0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
169 GO5; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.70 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
170 CLO 4mM 0.70 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
171 Primisulfuron EC50 0.65 >More info 0.62 >More info Carrier (primisulfuron) Original data GEO bulk
172 aba3-1 0.61 >More info 0.66 >More info wt Original data GEO bulk
173 Elevated CO2 AMPLE N DAY 0.58 >More info 0.69 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
174 leaf13 0.61 >More info 0.66 >More info unwounded leaves none Original data GEO bulk
175 aerial organ callus inducing medium 48 h 0.67 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
176 cs26 long day 0.64 >More info 0.63 >More info Leaves-WT-LD leaf Original data GEO bulk
177 edr1 36 h powdery mildew 0.65 >More info 0.62 >More info Col-0 36 h powdery mildew Original data GEO bulk
178 phr1 phl1 Root-Pi 0.66 >More info 0.61 >More info WT Shoot+Pi roots Original data GEO bulk
179 bZIP1ko mutant N+Light- 0.58 >More info 0.69 >More info WT-sib N+Light- whole plant Original data GEO bulk
180 leaf blade in D 0.57 >More info 0.70 >More info leaf blade in WL leaf blades Original data GEO bulk
181 Elevated CO2 fully expanded leaf 0.66 >More info 0.60 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
182 shoots bhlh100/101 0uM Fe 0.65 >More info 0.61 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
183 pepr1-1 Pepr2-3 +Pep2 10h -0.64 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
184 Dex-rga(delta17) 2h GA4+DEX -0.62 >More info -0.64 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
185 AsAKiin11 T2 0.58 >More info 0.68 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
186 Laer pretreat GA Flg22 0h 0.69 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
187 Col BTH 0.58 >More info 0.67 >More info Col rosettes Original data GEO bulk
188 pnp1-1 1wk -P 0.72 >More info 0.53 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
189 cat2-2; 8h switch to ambient CO2 concentrations; 0.63 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
190 P.p 2.5hai 0.64 >More info 0.61 >More info At-Control roots Original data GEO bulk
191 gai Control 0.66 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
192 Nicotinamide-69hr 0.65 >More info 0.60 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
193 Chitosan 3h Treatment 0.69 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
194 gpa1-4/agb1-2 ozone 2d -0.68 >More info -0.56 >More info Col ozone 2d ozone Original data GEO bulk
195 P.p 10.5hai 0.59 >More info 0.65 >More info At-Control roots Original data GEO bulk
196 gpa1 -ABA GC -0.55 >More info -0.69 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
197 Mutant siz1-3 0.64 >More info 0.60 >More info Col-0 Original data GEO bulk
198 Col-0 flu HL 3h 0.60 >More info 0.64 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
199 IRP1-OE-Fe--shoot 0.67 >More info 0.57 >More info COL-0-Fe--shoot shoot Original data
200 Rsch 1d 0.60 >More info 0.64 >More info Rsch CA Leaves Original data
201 siz1-3 control 0.64 >More info 0.60 >More info Col-0 control Original data GEO bulk
202 Col ozone 2d 0.58 >More info 0.66 >More info Col clean-air 2d ozone Original data GEO bulk
203 Light 3day wt -0.67 >More info -0.57 >More info 0h wt Original data
204 Triazolopyrimidine EC50 0.63 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
205 WT 90-105 min Xanthomonas 0.58 >More info 0.66 >More info WT T0 Original data GEO bulk
206 TNT-seedlings 0.62 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
207 Shoot -K 0.64 >More info 0.60 >More info Control-shoot Original data GEO bulk
208 K starvation (shoot) 0.64 >More info 0.60 >More info Ws (shoot) Original data GEO bulk
209 sid2 -0.69 >More info -0.54 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
210 anac017-1 H2O2 3h -0.63 >More info -0.60 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
211 Col-0 V. longisporum-inoculated 48 hpi 0.61 >More info 0.62 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
212 vtc1 (II) 0.64 >More info 0.59 >More info Col (II) rosette Original data GEO bulk
213 35S:VND7-VP16-GR+CHX 0.53 >More info 0.70 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
214 edr1 18 h powdery mildew 0.66 >More info 0.57 >More info Col-0 18 h powdery mildew Original data GEO bulk
215 Laer pretreat GA+JA Flg22 0h 0.62 >More info 0.59 >More info Laer pretreat water control leaf discs Original data GEO bulk
216 P.p 6hai 0.61 >More info 0.60 >More info At-Control roots Original data GEO bulk
217 Nicotinamide-53hr 0.66 >More info 0.55 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
218 Col-0 INA 48h 0.64 >More info 0.56 >More info Col-0 MOCK 48h Original data GEO bulk
219 aerial organ callus inducing medium 12 h 0.58 >More info 0.62 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
220 UV Stress 24 h (shoot) 0.63 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
221 gun1gun5 far-red pretreated -0.59 >More info -0.61 >More info WT far-red pretreated Original data GEO bulk
222 Osmotic Stress 24 h (shoot) 0.64 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
223 penta Control 0.63 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
224 Col 3d 0.57 >More info 0.62 >More info Col CA Leaves Original data
225 coi1-2 0.56 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
226 Rsch 8h 0.55 >More info 0.63 >More info Rsch CA Leaves Original data
227 Mutant coi1(leaf) -0.54 >More info -0.64 >More info Col-0 (leaf) Original data GEO bulk
228 bio4-1 mutant watered00µM biotin leaves -0.57 >More info -0.61 >More info bio4-1 mutant leaves leaves Original data GEO bulk
229 aerial organ callus inducing medium 24h 0.60 >More info 0.58 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
230 OH1 0.61 >More info 0.57 >More info Col-0 leaves Original data GEO bulk
231 ASL9-ox -0.61 >More info -0.57 >More info WT aerial parts of seedlings Original data GEO bulk
232 rcf1-1 cold 24h 0.53 >More info 0.64 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
233 ataf1-1 mutant Col-0 Un-inoculated -0.60 >More info -0.57 >More info WT Col-0 Un-inoculated Original data GEO bulk
234 cpr5npr1 0.58 >More info 0.59 >More info WT(COL) Original data GEO bulk
235 camta1/2/3 24h cold 0.62 >More info 0.55 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
236 WT in -N 0.62 >More info 0.55 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
237 Laer pretreat GA+JA Flg22 2h 0.59 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
238 Dex-rga(delta17) 4h GA4 -0.54 >More info -0.62 >More info Vector 4h GA4 shoots Original data GEO bulk
239 tt4 0.53 >More info 0.63 >More info Col-0 aerial part Original data
240 WT +Pep2 2h 0.81 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
241 Rsch 3d 0.57 >More info 0.59 >More info Rsch CA Leaves Original data
242 Col whole leaf 5 dpi 0.58 >More info 0.58 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
243 ERF96OE 0.57 >More info 0.59 >More info WT leaf Original data
244 Laer pretreat JA Flg22 1h 0.63 >More info 0.52 >More info Laer pretreat water control leaf discs Original data GEO bulk
245 ani1 T0.5 -0.52 >More info -0.63 >More info WT T0.5 root tissue Original data GEO bulk
246 cpr5 0.57 >More info 0.58 >More info WT(COL) Original data GEO bulk
247 WT 3h -P 0.54 >More info 0.61 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
248 lht1 untreated 0.56 >More info 0.59 >More info WT untreated untreated leaf Original data GEO bulk
249 Nicotinamide-73hr 0.63 >More info 0.52 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
250 treated group 0.60 >More info 0.54 >More info Control group Original data
251 rosette leaves fdh 0.62 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
252 vtc2 (I) 0.58 >More info 0.56 >More info Col (I) rosette Original data GEO bulk
253 vte2-1 3d vernalization 0.58 >More info 0.56 >More info WT 3d vernalization Original data GEO bulk
254 current injection 0.48 >More info 0.66 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
255 camta3-1 0.52 >More info 0.61 >More info WT Original data GEO bulk
256 camta2/3 warm 0.59 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
257 WT+H2O2 0.51 >More info 0.62 >More info WT H2O2 Original data GEO bulk
258 mil4 BTH 0.56 >More info 0.57 >More info Col BTH rosettes Original data GEO bulk
259 Col-0 48 hpi 0.60 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
260 downy mildew cotyledons late stage 0.63 >More info 0.50 >More info mock inoculated Cotyledons Original data GEO bulk
261 WT no Pi 0.63 >More info 0.50 >More info WT complete seedlings Original data
262 leaf blade in FRD 0.52 >More info 0.61 >More info leaf blade in WL leaf blades Original data GEO bulk
263 1 h Light IP RNA -0.50 >More info -0.62 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
264 smg5-2 0.61 >More info 0.51 >More info WT whole plant Original data GEO bulk
265 npr1-PsmES4326-24hpi -0.60 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
266 upf3 0.57 >More info 0.55 >More info WT whole plant Original data GEO bulk
267 8h-DC3000 avrRpm1 0.64 >More info 0.48 >More info 8h-DC3000 leaves Original data GEO bulk
268 Laer pretreat JA Flg22 2h 0.68 >More info 0.43 >More info Laer pretreat water control leaf discs Original data GEO bulk
269 Col laser microdissected 5 dpi 0.46 >More info 0.65 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
270 Atss3 Light4 -0.57 >More info -0.54 >More info Atss3 Dark0.5 Original data GEO bulk
271 toc1-1-49hr 0.57 >More info 0.54 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
272 atgsnor1-1 -0.62 >More info -0.49 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
273 scrm-D 0.62 >More info 0.49 >More info Col-0 WT whole seedling Original data GEO bulk
274 Dark 3day ivd 0.57 >More info 0.54 >More info 0h ivd Original data
275 sni1 0.51 >More info 0.60 >More info WT Original data GEO bulk
276 fls1-3 0.58 >More info 0.53 >More info Col-0 Rosette leaves Original data
277 Nicotinamide-89hr 0.63 >More info 0.48 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
278 Te 1d 0.60 >More info 0.51 >More info Te CA Leaves Original data
279 sta1 0.54 >More info 0.56 >More info WT Original data GEO bulk
280 Fenclorim 24hr 0.53 >More info 0.57 >More info Acetone 24hr root Original data GEO bulk
281 Laer pretreat GA Flg22 2h 0.63 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
282 Laer pretreat GA+JA Flg22 1h 0.59 >More info 0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
283 20d after anthesis 0.60 >More info 0.50 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
284 Nicotinamide-93hr 0.61 >More info 0.49 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
285 petiole in FRD 0.55 >More info 0.55 >More info petiole in WL petioles Original data GEO bulk
286 RPL18 TuMV inoculated total RNA 0.55 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
287 rcf1-1 cold 12h 0.53 >More info 0.57 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
288 35S::PI ap3-3 35S::AP-GR +DEX 0.47 >More info 0.63 >More info 0hr DEX Original data GEO bulk
289 WT-elf18 0.55 >More info 0.54 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
290 camta1/3 warm 0.53 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
291 Leaf GLU1-KO 0.54 >More info 0.55 >More info Leaf Col(0) rosette leaves Original data GEO bulk
292 Nicotinamide-65hr 0.64 >More info 0.45 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
293 Nicotinamide-85hr 0.60 >More info 0.49 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
294 leaf rlt1-1rlt2-1 -0.58 >More info -0.51 >More info leaf Col-0 leaf Original data GEO bulk
295 Mutant arf2-6 -0.62 >More info -0.47 >More info Col Original data GEO bulk
296 WT 1wk -P 0.58 >More info 0.51 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
297 OE WRKY63.3 high light 0.50 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
298 GSH 0.51 >More info 0.58 >More info control GSH treated seedlings Original data GEO bulk
299 gpa1 +ABA GC -0.50 >More info -0.59 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
300 Nicotinamide-57hr 0.61 >More info 0.48 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
301 agb1 gpa1 -ABA GC -0.47 >More info -0.62 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
302 P.p 30hai 0.49 >More info 0.60 >More info At-Control roots Original data GEO bulk
303 Imidazolinone EC50 0.53 >More info 0.55 >More info Carrier (Imidazolinone) Original data GEO bulk
304 upf1 0.54 >More info 0.54 >More info WT whole plant Original data GEO bulk
305 Col-0 INA 6d 0.58 >More info 0.50 >More info Col-0 MOCK 6d Original data GEO bulk
306 A. thaliana-A. lyrata hybrid -0.50 >More info -0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
307 Bur-0-3h IAA 0.61 >More info 0.47 >More info Bur-0h IAA whole plant Original data GEO bulk
308 WT chitooctaose 0.51 >More info 0.57 >More info WT water Original data GEO bulk
309 csn5 (csn5a-2 csn5b) light 0.63 >More info 0.45 >More info WT light Original data GEO bulk
310 eds16 whole leaf 7dpi -0.52 >More info -0.56 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
311 ced1 -0.58 >More info -0.50 >More info WT PEG 6hr seedlings Original data GEO bulk
312 Col whole leaf 3dpi 0.53 >More info 0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
313 Nicotinamide-81hr 0.67 >More info 0.40 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
314 WT cold 0.56 >More info 0.51 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
315 cat2-2; harvested 8h continiously maintained in
high CO2;
-0.74 >More info -0.33 >More info WT; harvested 8h continiously maintained in high
CO2;
2 whole rosettes Original data
316 ABA DFPM 0.53 >More info 0.54 >More info control Original data GEO bulk
317 wavy 0.62 >More info 0.44 >More info WT Original data GEO bulk
318 S14-150 0.52 >More info 0.54 >More info wt Original data GEO bulk
319 oas-a1.1 Cd 18h 0.53 >More info 0.53 >More info Cd 18h root Root Original data GEO bulk
320 gpa1-4/agb1-2 clean-air 3h -0.53 >More info -0.53 >More info Col clean-air 3h clean-air Original data GEO bulk
321 gh3.5D uninoculated -0.55 >More info -0.51 >More info Col-0 48 hpi Original data GEO bulk
322 rpoTmp(line) MLD stressed 0.56 >More info 0.49 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
323 gpa1 -ABA LF 0.53 >More info 0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
324 35S-MIF1 dark grown 0.62 >More info 0.43 >More info Dark-grown WT control Original data GEO bulk
325 CMV-A2b mutant 0.54 >More info 0.51 >More info Mock-At Aerial tissues Original data GEO bulk
326 WT resupplied Pi 4h 0.64 >More info 0.41 >More info WT complete seedlings Original data
327 WT light -0.52 >More info -0.53 >More info WT dark Original data GEO bulk
328 abi4 vtc2 (I) 0.52 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
329 Methyl Jasmonate 1 h 0.44 >More info 0.61 >More info Mock 1 h Original data Basic hormone treatment of seedlings
330 aba2 1% sucrose 12-day-old 0.43 >More info 0.62 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
331 1 h Light Total RNA -0.47 >More info -0.58 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
332 arf2 mock 0.51 >More info 0.53 >More info Col mock Original data GEO bulk
333 pad2-PsmES4326-24hpi -0.55 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
334 Shoot submergence 24h 0.53 >More info 0.51 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
335 Mutant arf2 (etiol) 0.51 >More info 0.53 >More info Col (etiol) Original data GEO bulk
336 nia1nia2 0.52 >More info 0.52 >More info Col-0 whole seedlings Original data GEO bulk
337 E.orontii Infection 3 day 0.39 >More info 0.65 >More info Uninfection 3 day Original data Elicitor treatments
338 ein5-1 ski2-3 0.51 >More info 0.52 >More info Col-0 aerial tissue Original data
339 dor drought 0.56 >More info 0.47 >More info WT drought Original data GEO bulk
340 cs26 short-day -0.50 >More info -0.53 >More info Leaves-WT-SD leaf Original data GEO bulk
341 CAX1/CAX3 mutant 0.57 >More info 0.46 >More info Col whole plant Original data GEO bulk
342 Leafminer systemically damaged thaliana seedlings 0.55 >More info 0.48 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
343 protoplasts T2 [flg22] 0.44 >More info 0.59 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
344 shoots bhlh100/101 100uM Fe 0.44 >More info 0.59 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
345 AtLysM RLK1 mutant chitooctaose -0.48 >More info -0.55 >More info WT chitooctaose Original data GEO bulk
346 NAA -AA 0.54 >More info 0.48 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
347 SCR-GR Time 1H Dex 0.60 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
348 aox1a(line) MLD stressed 0.51 >More info 0.51 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
349 pmr4-1 control 0.53 >More info 0.49 >More info WT control uninoculated Original data GEO bulk
350 Col-0 drought 0.59 >More info 0.43 >More info Col-0 control Original data GEO bulk
351 Bur-0-1h IAA 0.62 >More info 0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
352 Infected pft1 leaf 0.38 >More info 0.64 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
353 WT Seedling BL -0.47 >More info -0.55 >More info WT Seedling Dark Original data GEO bulk
354 MIL4 ox BTH 0.49 >More info 0.53 >More info Col BTH Original data GEO bulk
355 IRP1-OE-Ctrl--root 0.49 >More info 0.53 >More info COL-0-Ctrl--root root Original data
356 camta3-2 0.52 >More info 0.49 >More info WT Original data GEO bulk
357 rosettes WT drought 0.56 >More info 0.45 >More info rosettes WT watered Original data GEO bulk
358 atgsnor1-1-avrB-6h 0.48 >More info 0.53 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
359 Col 1d 0.45 >More info 0.56 >More info Col CA Leaves Original data
360 RRE2 Chitin 0.53 >More info 0.47 >More info Chitin Original data GEO bulk
361 8hr-pH4.5 0.54 >More info 0.46 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
362 RPL18 TuMV inoculated polysomal RNA 0.50 >More info 0.50 >More info mock inoculated polysomal RNA PO Original data GEO bulk
363 bZIP1ko mutant N+Light+ 0.66 >More info 0.34 >More info WT-sib N+Light+ whole plant Original data GEO bulk
364 abi4-102 (II) 0.50 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
365 Time-0 chr11-1chr17-1 -0.55 >More info -0.45 >More info Time-0 Col-0 leaf explants Original data
366 gpa1-4/agb1-2 ozone 3h -0.61 >More info -0.39 >More info Col ozone 3h ozone Original data GEO bulk
367 Dark 4 h pls RedLight 1min -0.49 >More info -0.51 >More info Dark 4 h Original data Light treatments
368 eds16 whole leaf 6hpi -0.44 >More info -0.56 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
369 penta Pst DC3000 12hpi 0.55 >More info 0.44 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
370 D2O 0.55 >More info 0.44 >More info H2O seedling Original data GEO bulk
371 Salt Stress 24 h (root) 0.48 >More info 0.51 >More info Stress mock 24 h (root) Original data Stress treatments
372 bHLH122 ox -0.43 >More info -0.56 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
373 gun1-1 +lincomycin -0.43 >More info -0.56 >More info Col-0 +lincomycin Original data GEO bulk
374 Truncated AC2 T2 -0.70 >More info -0.28 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
375 eds16 whole leaf 7d UI -0.54 >More info -0.44 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
376 apk1 apk2 0.53 >More info 0.45 >More info Col0-control whole rosette Original data GEO bulk
377 5-Triiodobenzoic acid3 h 0.50 >More info 0.48 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
378 Stem tissue 5 days NAA 0.44 >More info 0.54 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
379 OE WRKY63.3 0.45 >More info 0.53 >More info OE WRKY40.4 none leaf Original data GEO bulk
380 AsAKiin11 T1 0.39 >More info 0.59 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
381 AtMYB30-ox 2-4h Xanthomonas 0.65 >More info 0.32 >More info WT 2-4h Xanthomonas Original data GEO bulk
382 AtMYB30-as 90-105 min Xanthomonas 0.58 >More info 0.39 >More info WT 90-105 min Xanthomonas Original data GEO bulk
383 pif3 Dark 0h -0.50 >More info -0.47 >More info WT Dark 0h etiolated seedling Original data GEO bulk
384 Col-0 SA 0.59 >More info 0.38 >More info Col-0 Original data GEO bulk
385 C24-3h IAA 0.53 >More info 0.44 >More info C24-0h IAA whole plant Original data GEO bulk
386 WT 1mM phosphate 8 hours. -0.53 >More info -0.44 >More info WT control (not supplemented). Original data
387 msh1 recA3 heat shock 0.38 >More info 0.59 >More info WT heat shock above-ground parts Original data GEO bulk
388 CeO2 germinant -0.33 >More info -0.64 >More info Millipore Water germinant CeO2 seedling Original data
389 Col upon hypoxia 6 hrs 0.58 >More info 0.38 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
390 scrm-D:mute 0.52 >More info 0.44 >More info Col-0 WT whole seedling Original data GEO bulk
391 Cold Stress 24 h (shoot) 0.55 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
392 4d red light grown hmr-5 seedlings 0.54 >More info 0.42 >More info 4d red light grown WT(Col-0) seedlings Original data
393 P35S:rGRF3 0.55 >More info 0.41 >More info WS Original data GEO bulk
394 agb1 gpa1 +ABA LF -0.45 >More info -0.51 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
395 Norflurazon 0.37 >More info 0.58 >More info Col-0 Original data GEO bulk
396 ppi2 0.42 >More info 0.53 >More info WT whole plant Original data GEO bulk
397 Norflurazon 0.37 >More info 0.58 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
398 WT +Pep2 10h 0.56 >More info 0.38 >More info WT untreated Pep2 Original data GEO bulk
399 Col-0 SA 0.58 >More info 0.36 >More info Col-0 water complete seedling Original data
400 cat2-hCO2 -0.59 >More info -0.35 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
401 pnp1-1 3h -P 0.52 >More info 0.42 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
402 pap1-D/tt4 0.44 >More info 0.50 >More info Col-0 aerial part Original data
403 atmospheric CO2 low Mg shoot 0.56 >More info 0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
404 HARAP hypoxic 0.40 >More info 0.53 >More info hypoxic hypoxia Original data GEO bulk
405 opr3 JA 2 h 0.28 >More info 0.65 >More info opr3 0 h Original data GEO bulk
406 toc1-1-77hr 0.71 >More info 0.22 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
407 arf2 brz -0.43 >More info -0.50 >More info arf2 mock Original data GEO bulk
408 phr1 Shoot-Pi -0.43 >More info -0.50 >More info WT Root-Pi shoots Original data GEO bulk
409 IRP1-OE-Ctrl--shoot 0.52 >More info 0.40 >More info COL-0-Ctrl--shoot shoot Original data
410 JA 0.38 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
411 irradiated leaf (WT 1d) 0.57 >More info 0.35 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
412 Nicotinamide-49hr 0.57 >More info 0.35 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
413 Col-0 norflurazon 0.42 >More info 0.50 >More info Col-0 control Original data GEO bulk
414 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
415 Nuclear GSH1 0.42 >More info 0.50 >More info Cytoplasmic GSH1 Control Original data GEO bulk
416 ckh1 CK200 0.41 >More info 0.51 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
417 low CO2 + light 0.53 >More info 0.38 >More info normal CO2 + light Original data GEO bulk
418 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
419 WT Red light 18h -0.40 >More info -0.51 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
420 oligomycin 1 h 0.35 >More info 0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
421 apum23 0.50 >More info 0.41 >More info WT (Col-3) aerial parts Original data GEO bulk
422 21h-DC3000 avrRpm1 -0.60 >More info -0.31 >More info 21h-DC3000 leaves Original data GEO bulk
423 WT mitomycin C 0.55 >More info 0.35 >More info WT mock shoot apical meristem Original data
424 35:SUB1A 0.55 >More info 0.35 >More info WT whole seedling Original data GEO bulk
425 npr1 sni1 SA 0.40 >More info 0.50 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
426 ein2-PsmES4326-24hpi -0.30 >More info -0.60 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
427 shoots WT 0uM Fe 0.56 >More info 0.33 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
428 35:SUB1C 0.50 >More info 0.39 >More info WT whole seedling Original data GEO bulk
429 WT leaves - Fe 0.39 >More info 0.50 >More info WT leaves + Fe Leaves Original data GEO bulk
430 Mock pft1 leaf 0.20 >More info 0.69 >More info Mock Col-0 leaf water leaf Original data GEO bulk
431 plant (tga2-5-6) 4h phytoprostane A1 0.54 >More info 0.34 >More info plant (tga2-5-6) 4h control Original data GEO bulk
432 Dark 6h ivd 0.51 >More info 0.37 >More info 0h ivd Original data
433 Cd 24h root -0.38 >More info -0.50 >More info WT-Untreated Shoot Original data GEO bulk
434 RGA-GR-DEX 0.30 >More info 0.58 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
435 Nicotinamide-61hr 0.58 >More info 0.29 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
436 GO5; 0h switch to ambient CO2 concentrations; -0.55 >More info -0.31 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
437 albino Ds13-2198-1 -0.54 >More info -0.32 >More info control Original data GEO bulk
438 pskr1-5 -0.54 >More info -0.32 >More info wild type Cotyledons Original data GEO bulk
439 Inflorescences Trp1 -0.34 >More info -0.52 >More info Inflorescences ler inflorescences Original data GEO bulk
440 csn3-1 light 0.51 >More info 0.35 >More info WT light Original data GEO bulk
441 del1-1 5dpi 0.63 >More info 0.23 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
442 overexpresser LBD38 in -N -0.51 >More info -0.35 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
443 sav1-1 light 0.51 >More info 0.35 >More info Col-0 light seedlings Original data GEO bulk
444 Uniconazole 12 h 0.51 >More info 0.35 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
445 til1-1 22C 0.34 >More info 0.51 >More info Col-0 22C Original data GEO bulk
446 toc1-1-65hr 0.57 >More info 0.28 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
447 9m.KNO3 0.35 >More info 0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
448 Atwrky63 -0.51 >More info -0.33 >More info Col0 none leaf Original data GEO bulk
449 Col leaf scrape 5 dpi 0.54 >More info 0.30 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
450 bbx24 in With Light 0.51 >More info 0.33 >More info WT in With Light light seedling Original data
451 GST-overexpression seedlings control 0.64 >More info 0.20 >More info WT seedlings control Seedlings Original data
452 MYB12OX/tt4 0.34 >More info 0.50 >More info Col-0 aerial part Original data
453 WT cotyledons -0.59 >More info -0.25 >More info Control for tissue data cotyledons Original data
454 anac017-2 H2O2 3h -0.61 >More info -0.23 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
455 Ambient CO2 expanding leaf -0.58 >More info -0.26 >More info Control for tissue data expanding leaf Original data
456 SHR-GR Time 1H Dex 0.50 >More info 0.33 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
457 toc1-1-53hr 0.59 >More info 0.24 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
458 coi1-PsmES4326-24hpi -0.25 >More info -0.58 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
459 Mh0 UV -0.62 >More info -0.20 >More info Mh0 mock UV seedling Original data
460 DUO1 induced 6h -0.52 >More info -0.30 >More info 6hr-not-induced whole plant Original data GEO bulk
461 Full AC2 T2 0.53 >More info 0.29 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
462 Aerobic e1 ate2 0.52 >More info 0.30 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
463 HairpinZ 4 h (leaf) 0.85 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
464 C58 3hpi 0.25 >More info 0.57 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
465 Expanding leaf -0.55 >More info -0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
466 GA 0.25 >More info 0.56 >More info none GA Rosette Original data GEO bulk
467 AZC 0.54 >More info 0.26 >More info noneHS Original data GEO bulk
468 light -0.62 >More info -0.18 >More info dark light seedling Original data GEO bulk
469 C24 24h cold -0.50 >More info -0.30 >More info Col 24h cold leaf Original data GEO bulk
470 SA Treated 0.72 >More info 0.08 >More info Water Original data GEO bulk
471 cov1 cov2 stem Base 0.56 >More info 0.23 >More info WT stem Base stem Base Original data GEO bulk
472 GRX-overexpression seedlings control 0.53 >More info 0.26 >More info WT seedlings control Seedlings Original data GEO bulk
473 Methyl Jasmonate 0.5 h 0.13 >More info 0.66 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
474 siliques AtHb1 control 0.27 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
475 Elevated CO2 leaf primordia 0.29 >More info 0.50 >More info Ambient CO2 leaf primordia leaf primordia Original data
476 sfr3 cold 0.63 >More info 0.15 >More info WT-cold aerial tissues Original data GEO bulk
477 ML (Mature leaves) 35DAS -0.54 >More info -0.24 >More info Control for tissue data Original data GEO bulk
478 Ambient CO2 fully expanded leaf -0.54 >More info -0.24 >More info Control for tissue data fully expanded leaf Original data
479 ein2 0.51 >More info 0.26 >More info Col-0 Leaves Original data GEO bulk
480 auxin and brassinazole seedlings 0.55 >More info 0.22 >More info auxin seedlings Original data GEO bulk
481 vtc1-1 -0.13 >More info -0.64 >More info Col-0 whole plant Original data GEO bulk
482 Col-0 +lincomycin 0.23 >More info 0.54 >More info Col-0 -lincomycin Original data GEO bulk
483 Rosette leaf No12 -0.53 >More info -0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
484 spx1 spx2 complete 0.58 >More info 0.17 >More info WT complete seedlings Original data
485 35S:RPS4 rrs1-11 2h 0.55 >More info 0.20 >More info 35S:RPS4 2h leaves Original data
486 penta Flg22 1h 0.56 >More info 0.19 >More info Laer Flg22 1h leaf discs Original data GEO bulk
487 inhibitor A Treated 0.25 >More info 0.50 >More info Negative Control Original data GEO bulk
488 C24 UV1 -0.54 >More info -0.20 >More info C24 mock UV seedling Original data
489 FAMA induced 4h -0.11 >More info -0.63 >More info control 4h Whole seedling Original data GEO bulk
490 Col-0 24hpi A. brassicicola 0.71 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
491 Col 8h 0.50 >More info 0.23 >More info Col CA Leaves Original data
492 15m.KNO3 0.21 >More info 0.52 >More info To. KNO3 14 day old Roots Original data GEO bulk
493 Ambient CO2 leaf primordia -0.55 >More info -0.17 >More info Control for tissue data leaf primordia Original data
494 Lip0 UV 0.55 >More info 0.17 >More info Lip0 mock UV seedling Original data
495 pvip1 pvip2 seedling 0.74 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
496 vte2 leaves 48h LT 0.52 >More info 0.20 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
497 Apex 5DAS -0.50 >More info -0.20 >More info Control for tissue data Original data GEO bulk
498 Rsch CA -0.54 >More info -0.15 >More info Col CA Leaves Original data
499 WT-Dry 0.15 >More info 0.54 >More info WT-CK dehydration treatment 1h Original data
500 flu dark 8hours/30 minute light 0.15 >More info 0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
501 wrky33 mock 0.50 >More info 0.17 >More info WT mock 14 hour mock control leaves Original data
502 12m.KCl 0.16 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
503 glk1 glk2 GLK1-GR +DEX 24h -0.63 >More info -0.03 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
504 amiRAP aerobic -0.14 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
505 Col PSTDC3000 24h 0.77 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
506 Seeds stage3 with siliques -0.50 >More info -0.14 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
507 siliques -0.51 >More info -0.13 >More info Control for tissue data Original data GEO bulk
508 P. infestans 6 h (leaf) 0.78 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
509 vte2 leaves 120h LT 0.56 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
510 Col in Pi deficiency medium 0.06 >More info 0.51 >More info Col in control medium root Original data GEO bulk
511 NJ15 0.07 >More info 0.50 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
512 Shoot submergence 7h 0.57 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
513 agb1 -ABA LF 0.02 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
514 amiR-tor induced 6d 0.04 >More info 0.51 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
515 opr3 JA 0.5 h -0.03 >More info 0.58 >More info opr3 0 h Original data GEO bulk
516 agb1 -ABA GC -0.00 >More info -0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
517 WT NAA 1h 0.58 >More info -0.07 >More info WT 0h Leaf tissue Original data GEO bulk
518 2hr transitory KNO3 ECR cell -0.05 >More info 0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
519 Light 3day hml -0.66 >More info 0.19 >More info 0h hml Original data
520 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
521 bri1-116 -0.30 >More info 0.73 >More info Col seedling Original data GEO bulk
522 0h hml 0.53 >More info -0.15 >More info 0h wt Original data
523 seed germinating in countinuous light 24h SL -0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
524 Red/FR Light45min -0.19 >More info 0.55 >More info FarRed Light 45min Original data Light treatments
525 GRX-overexpression seedlings IAA 0.19 >More info -0.51 >More info WT seedlings IAA Seedlings Original data GEO bulk
526 coi1 0.27 >More info -0.54 >More info Col-0 Leaves Original data GEO bulk
527 Shoot apex inflorescence (after bolting) -0.45 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages