4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on red illumination +lincomycin
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List of experiments correlated with "red illumination +lincomycin"  Help Download transcriptome of top 30
Score Experiment Correlation from
red illumination +lincomycin		 Correlation to
red illumination +lincomycin		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 red illumination +lincomycin 1.00 >More info 1.00 >More info red illumination -lincomycin Original data GEO bulk
2 Norflurazon 0.69 >More info 0.58 >More info Col-0 Original data GEO bulk
3 Norflurazon 0.69 >More info 0.58 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
4 Heat shock optimum 0.55 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
5 Shoot apex inflorescence (after bolting) 0.52 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
6 piffq 2d WL 0.62 >More info 0.54 >More info WT 2d WL whole seedling Original data GEO bulk
7 Indigo Carmine 0.5 uM -0.65 >More info -0.49 >More info Control MV and IC Indigo Carmine Original data
8 21h-DC3000 avrRpm1 0.66 >More info 0.47 >More info 21h-DC3000 leaves Original data GEO bulk
9 WT 30μM phosphate 8 hours. 0.66 >More info 0.46 >More info WT control (not supplemented). Original data
10 pip3 At2g19270 TDNA 1 0.65 >More info 0.47 >More info Col-0 whole plant Original data GEO bulk
11 seed germinating in countinuous light 24h SL 0.44 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
12 2hr continuous KCl and MSX control PeR cell -0.61 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
13 GA4 3 h (ga1 seed) 0.64 >More info 0.46 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
14 phyABCDE Dark 0.69 >More info 0.41 >More info WT Dark Dark whole seedling Original data GEO bulk
15 dark +lincomycin 0.53 >More info 0.55 >More info dark -lincomycin Original data GEO bulk
16 root cells cortex 140mM NaCl 32 hours 0.79 >More info 0.29 >More info root cells cortex standard 1 hour root cells cortex Original data
17 Col-0 norflurazon 0.65 >More info 0.43 >More info Col-0 control Original data GEO bulk
18 root cells epidermis 140mM NaCl 3 hours 0.75 >More info 0.32 >More info root cells epidermis standard 1 hour root cells epidermis Original data
19 Leaf GLU1-KO 0.71 >More info 0.36 >More info Leaf Col(0) rosette leaves Original data GEO bulk
20 root cells epidermis 140mM NaCl 32 hours 0.72 >More info 0.34 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 ABA control 0.47 >More info 0.58 >More info No ABA control Original data GEO bulk
22 phr1 phl1 Shoot-Pi 0.70 >More info 0.34 >More info WT Shoot-Pi shoots Original data GEO bulk
23 root endodermis and quiescent center pH4.6 0.71 >More info 0.33 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
24 seedling h S Exp 0.71 >More info 0.33 >More info seedling -S Exp seedling Original data
25 cdpk6-yfp 0.47 >More info 0.57 >More info Kan seedlings Original data GEO bulk
26 hira-protoplast 0.58 >More info 0.45 >More info WT-protoplast protoplast Original data
27 phyABDE Dark 0.66 >More info 0.37 >More info WT Dark Dark whole seedling Original data GEO bulk
28 root cortex pH4.6 0.60 >More info 0.43 >More info root cortex pH5.7 Original data GEO bulk
29 sta1 0.63 >More info 0.39 >More info WT Original data GEO bulk
30 WT drought -0.66 >More info -0.36 >More info WT control All aerial tissue Original data GEO bulk
31 root cells epidermis 140mM NaCl 48 hours 0.75 >More info 0.27 >More info root cells epidermis standard 1 hour root cells epidermis Original data
32 S14-150 0.59 >More info 0.42 >More info wt Original data GEO bulk
33 Imidazolinone EC50 0.63 >More info 0.37 >More info Carrier (Imidazolinone) Original data GEO bulk
34 Col leaf 100mM NaCl 0.67 >More info 0.33 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
35 Col leaf 100mM NaCl 0.67 >More info 0.33 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
36 Col 100mM NaCl 0.67 >More info 0.33 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
37 Cs root -0.59 >More info -0.41 >More info control root Original data GEO bulk
38 P.syringae vir 4 h (leaf) 0.59 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
39 root epidermis and lateral root cap -S 0.63 >More info 0.37 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
40 sicy-192 cotyledons 0.62 >More info 0.37 >More info WT cotyledons cotyledons Original data
41 root cells epidermis 140mM NaCl 20 hours 0.76 >More info 0.23 >More info root cells epidermis standard 1 hour root cells epidermis Original data
42 prors1-2 leaves 0.51 >More info 0.48 >More info Col-0 leaves leaves Original data
43 root stele -S 0.62 >More info 0.37 >More info root stele pH5.7 Original data GEO bulk
44 msh1 recA3 untreated 0.55 >More info 0.44 >More info WT untreated above-ground parts Original data GEO bulk
45 bri1-116 0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
46 root cells epidermis 140mM NaCl 8 hours 0.76 >More info 0.22 >More info root cells epidermis standard 1 hour root cells epidermis Original data
47 noa1-2 0.63 >More info 0.35 >More info Col-0 whole seedlings Original data GEO bulk
48 21h-DC3000 hrpA 0.60 >More info 0.38 >More info 21h-DC3000 leaves Original data GEO bulk
49 ahg1-1 0.70 >More info 0.27 >More info ABA control Original data GEO bulk
50 rcf1-1 cold 0h 0.60 >More info 0.37 >More info WT cold 0h Control seedlings Original data GEO bulk
51 ahg2-1 0.68 >More info 0.28 >More info WT (Col) control Original data GEO bulk
52 upb1-1 elongation zone -0.55 >More info -0.41 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
53 root epidermis and lateral root cap pH4.6 0.61 >More info 0.35 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
54 35S::MBF1c -0.62 >More info -0.33 >More info control Original data GEO bulk
55 Ws 100mM NaCl 0.71 >More info 0.24 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
56 Ws leaf 100mM NaCl 0.71 >More info 0.24 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
57 clf-28 swn-7 0.58 >More info 0.37 >More info Col whole plant Original data GEO bulk
58 Tsu -Fe 24h Roots 0.60 >More info 0.35 >More info Tsu +Fe 24h Roots Original data GEO bulk
59 Tsu-1 -Fe 24h 0.60 >More info 0.35 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
60 35S::Zat12+H2O2 0.60 >More info 0.34 >More info WT+H2O2 H2O2 Original data GEO bulk
61 Brz220 3 h 0.58 >More info 0.35 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
62 Prohexadione 3 h -0.57 >More info -0.36 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
63 SHR-GR Time 1H Dex -0.68 >More info -0.24 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
64 micropylar endosperm heart stage 0.53 >More info 0.39 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
65 root cells cortex 140mM NaCl 20 hours 0.75 >More info 0.17 >More info root cells cortex standard 1 hour root cells cortex Original data
66 Col-0 (t-zeatin 3 h) 0.59 >More info 0.33 >More info Col-0 Original data Cytokinin treatment of seedlings
67 embryo proper heart stage 0.51 >More info 0.40 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
68 24h light (+Lincomycin) 0.53 >More info 0.38 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
69 SCR 48hr-S 0.34 >More info 0.57 >More info SCR 0hr endodermis Original data
70 35S::PI ap3-3 35S::AP-GR +DEX 0.53 >More info 0.37 >More info 0hr DEX Original data GEO bulk
71 gun5 norflurazon 0.52 >More info 0.38 >More info gun5 control Original data GEO bulk
72 Selenate (root) 0.61 >More info 0.29 >More info Ws (root) Original data GEO bulk
73 Root Selenate 0.61 >More info 0.29 >More info Root control 40 micromolar selenate Root Original data GEO bulk
74 apum23 0.57 >More info 0.33 >More info WT (Col-3) aerial parts Original data GEO bulk
75 ahg3-1 0.71 >More info 0.19 >More info ABA control Original data GEO bulk
76 seed germinating in countinuous light 6 h SL 0.61 >More info 0.28 >More info Control for tissue data seed Original data GEO bulk
77 peripheral endosperm heart stage 0.53 >More info 0.36 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
78 root cells endodermis 140mM NaCl 20 hours 0.71 >More info 0.18 >More info root cells endodermis standard 1 hour root cells endodermis Original data
79 SCR 24hr-S 0.31 >More info 0.58 >More info SCR 0hr endodermis Original data
80 ppi2 0.60 >More info 0.28 >More info WT whole plant Original data GEO bulk
81 root cells endodermis 140mM NaCl 48 hours 0.71 >More info 0.17 >More info root cells endodermis standard 1 hour root cells endodermis Original data
82 pif4pif5 mut dark -0.10 >More info -0.78 >More info WT dark Original data GEO bulk
83 root cap pGL2(root cap pGL2BRI1) 8h BL -0.59 >More info -0.29 >More info root cap pGL2(root cap pGL2BRI1) 0h BL brassinosteroid root Original data
84 seed germinating in countinuous light 1 h SL 0.57 >More info 0.31 >More info Control for tissue data seed Original data GEO bulk
85 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.57 >More info 0.31 >More info Control for tissue data Original data GEO bulk
86 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.58 >More info 0.30 >More info Control for tissue data Original data GEO bulk
87 Sulfometuron EC50 0.59 >More info 0.29 >More info Carrier Original data GEO bulk
88 Shoot -Cs 0.54 >More info 0.33 >More info Control-shoot Original data GEO bulk
89 sicy-192 gun1-101 cotyledons 0.53 >More info 0.34 >More info WT cotyledons cotyledons Original data
90 SCR 72hr-S 0.31 >More info 0.56 >More info SCR 0hr endodermis Original data
91 2hr continuous KNO3 and MSX and Gln PeR cell 0.59 >More info 0.28 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
92 seed during stratification 48 h S 0.57 >More info 0.30 >More info Control for tissue data seed Original data GEO bulk
93 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.57 >More info 0.30 >More info Control for tissue data Original data GEO bulk
94 WT Shoot-Pi -0.57 >More info -0.30 >More info WT Shoot+Pi shoots Original data GEO bulk
95 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.58 >More info 0.29 >More info Control for tissue data Original data GEO bulk
96 line J1551-5 days control + 2 days salt s 0.61 >More info 0.25 >More info line J1551-7 days-control Original data
97 Bur-0-3h IAA 0.65 >More info 0.21 >More info Bur-0h IAA whole plant Original data GEO bulk
98 root cells endodermis 140mM NaCl 32 hours 0.70 >More info 0.16 >More info root cells endodermis standard 1 hour root cells endodermis Original data
99 SCR 96hr-S 0.35 >More info 0.51 >More info SCR 0hr endodermis Original data
100 Col(gl) 0mM NaCl 0.55 >More info 0.30 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
101 Col(gl) leaf 0mM NaCl 0.55 >More info 0.30 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
102 Primisulfuron EC50 0.57 >More info 0.28 >More info Carrier (primisulfuron) Original data GEO bulk
103 Col-7 Sucrose 0.69 >More info 0.16 >More info col-7 Original data GEO bulk
104 Triazolopyrimidine EC50 0.58 >More info 0.27 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
105 arp6-10 12 ºC 0.35 >More info 0.50 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
106 sfr6 cold 0.11 >More info 0.74 >More info WT cold All aerial tissue Original data GEO bulk
107 stn7-1 0.50 >More info 0.34 >More info Col-0 rosette leaves Original data GEO bulk
108 Starch sheath 2 days NAA 0.56 >More info 0.28 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
109 root stele pH4.6 0.61 >More info 0.23 >More info root stele pH5.7 Original data GEO bulk
110 rdr1-1 -0.56 >More info -0.27 >More info Col-0 Original data GEO bulk
111 seed during stratification 12 h S 0.54 >More info 0.29 >More info Control for tissue data seed Original data GEO bulk
112 root cells cortex 140mM NaCl 3 hours 0.74 >More info 0.09 >More info root cells cortex standard 1 hour root cells cortex Original data
113 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.54 >More info 0.28 >More info Control for tissue data Original data GEO bulk
114 Full AC2 T1 0.53 >More info 0.29 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
115 seed freshly harvested H 0.54 >More info 0.28 >More info Control for tissue data seed Original data GEO bulk
116 dense canopy -0.58 >More info -0.24 >More info single (control) petiole Original data GEO bulk
117 root longitudinal zone-3 low sulfur 0.55 >More info 0.26 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
118 gai Flg22 1h 0.52 >More info 0.29 >More info Laer Flg22 1h leaf discs Original data GEO bulk
119 per1 in Pi deficiency medium 0.53 >More info 0.28 >More info Col in Pi deficiency medium root Original data GEO bulk
120 atgsnor1-3-avrB-6h 0.50 >More info 0.31 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
121 Callus 0.58 >More info 0.23 >More info Control for tissue data callus Original data GEO bulk
122 root cells cortex 140mM NaCl 48 hours 0.72 >More info 0.09 >More info root cells cortex standard 1 hour root cells cortex Original data
123 HDG4 0.57 >More info 0.24 >More info Control for tissue data shoot apical meristem Original data GEO bulk
124 LAS 0.54 >More info 0.26 >More info Control for tissue data shoot apical meristem Original data GEO bulk
125 dry seed 0 h 0.52 >More info 0.28 >More info Control for tissue data seed Original data GEO bulk
126 Heat shock 30%Inhibition 0.52 >More info 0.28 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
127 seed germinating in countinuous light 12 h SL 0.55 >More info 0.25 >More info Control for tissue data seed Original data GEO bulk
128 seed during stratification 1 h S 0.54 >More info 0.26 >More info Control for tissue data seed Original data GEO bulk
129 aox1a:rpoTmp MLD stressed 0.53 >More info 0.26 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
130 axr2 0.51 >More info 0.28 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
131 root cells epidermis 140mM NaCl 1 hour 0.76 >More info 0.03 >More info root cells epidermis standard 1 hour root cells epidermis Original data
132 root cells cortex 140mM NaCl 1 hour 0.68 >More info 0.10 >More info root cells cortex standard 1 hour root cells cortex Original data
133 Mutant lwd1_lwd2 0.55 >More info 0.22 >More info Wildtype for phy mutants Original data GEO bulk
134 root cells endodermis 140mM NaCl 3 hours 0.65 >More info 0.12 >More info root cells endodermis standard 1 hour root cells endodermis Original data
135 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.55 >More info 0.22 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
136 EBE-XVE +estradiol 0.66 >More info 0.11 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
137 Heat no recovery 0.59 >More info 0.18 >More info Mock no recovery seedling Original data GEO bulk
138 Base wox4 -0.55 >More info -0.22 >More info Base Col base of stem Original data GEO bulk
139 WR 35S 3h BL -0.63 >More info -0.14 >More info WR 35S 0h BL brassinosteroid root Original data
140 Differentiation 12h 0.56 >More info 0.20 >More info Differentiation 0h leaves Original data
141 Col-0 6h NAA 0.59 >More info 0.17 >More info Col-0 6h MOCK Original data GEO bulk
142 NAA 6h 0.59 >More info 0.16 >More info before treatment NAA root Original data GEO bulk
143 WT (Col) glucose 0.56 >More info 0.19 >More info WT (Col) glucose seedlings Original data GEO bulk
144 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.51 >More info 0.24 >More info Control for tissue data Original data GEO bulk
145 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.53 >More info 0.22 >More info Control for tissue data Original data GEO bulk
146 SND1 0h 0.59 >More info 0.16 >More info wt 0h Original data GEO bulk
147 sid2-2 9 hpi A. brassicicola 0.57 >More info 0.18 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
148 slr-1 6h NAA -0.62 >More info -0.13 >More info Col-0 6h NAA Original data GEO bulk
149 pip3 At2g19270 RNAi 24 -0.55 >More info -0.19 >More info Nd-1 whole plant Original data GEO bulk
150 Atss3 Light1 -0.51 >More info -0.23 >More info Atss3 Dark0.5 Original data GEO bulk
151 S58-2 0.51 >More info 0.23 >More info wt Original data GEO bulk
152 low CO2 + light -0.56 >More info -0.18 >More info normal CO2 + light Original data GEO bulk
153 Cold Stress 24 h (shoot) 0.51 >More info 0.23 >More info Stress mock 24 h (shoot) Original data Stress treatments
154 Atape2 low light 0.53 >More info 0.21 >More info Control for tissue data shoot apical meristem Original data GEO bulk
155 nia1nia2noa1-2 0.57 >More info 0.17 >More info Col-0 whole seedlings Original data GEO bulk
156 A2hsfa1-ox in quadruple mutant 0.50 >More info 0.23 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
157 intact root auxin 0.59 >More info 0.14 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
158 COL-0-Fe--root 0.51 >More info 0.22 >More info COL-0-Ctrl--root root Original data
159 root cells cortex 140mM NaCl 8 hours 0.66 >More info 0.07 >More info root cells cortex standard 1 hour root cells cortex Original data
160 toc1-1-93hr 0.54 >More info 0.19 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
161 SCR-GR Time 6H Dex -0.67 >More info -0.05 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
162 lec1-1 8 DAF Seed 0.54 >More info 0.18 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
163 root cells stele 140mM NaCl 48 hours 0.69 >More info 0.03 >More info root cells stele standard 1 hour root cells stele Original data
164 dde2-2 24hpi A. brassicicola -0.52 >More info -0.20 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
165 root cells endodermis 140mM NaCl 8 hours 0.62 >More info 0.10 >More info root cells endodermis standard 1 hour root cells endodermis Original data
166 35S::Zat12 0.50 >More info 0.22 >More info WT Original data GEO bulk
167 Apex mir-319b 17DAS 0.52 >More info 0.20 >More info Apex Col 14DAS Original data GEO bulk
168 fus3-3 8 DAF Seed 0.50 >More info 0.21 >More info WT (Col-0) 8 DAF Seed developing seeds dissected from sliques Original data
169 sav1-1 light 0.51 >More info 0.20 >More info Col-0 light seedlings Original data GEO bulk
170 cs26 short-day 0.51 >More info 0.20 >More info Leaves-WT-SD leaf Original data GEO bulk
171 BAM7 Ox untreated 0.50 >More info 0.21 >More info WT untreated none shoot Original data
172 HMG 0.52 >More info 0.19 >More info Control for tissue data shoot apical meristem Original data GEO bulk
173 endosperm paclobutrazol 0.56 >More info 0.14 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
174 rpl24 polysome 0.61 >More info 0.09 >More info WT polysome seedling shoot/aerial seedling Original data
175 AtHB8 0.57 >More info 0.13 >More info Control for tissue data shoot apical meristem Original data GEO bulk
176 root cells stele 140mM NaCl 32 hours 0.66 >More info 0.03 >More info root cells stele standard 1 hour root cells stele Original data
177 col 24h4c set4 0.50 >More info 0.19 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
178 pip3 At2g19270 RNAi 32 -0.52 >More info -0.16 >More info Nd-1 whole plant Original data GEO bulk
179 Stem tissue 5 days NAA 0.52 >More info 0.16 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
180 hni9 high nitrogen 0.54 >More info 0.14 >More info WT high nitrogen roots Original data GEO bulk
181 protoplasted roots pH4.6 0.54 >More info 0.14 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
182 rrd2 IBA -0.17 >More info -0.51 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
183 aba3-1 0.50 >More info 0.18 >More info wt Original data GEO bulk
184 rdr2-1 -0.59 >More info -0.09 >More info Col-0 Original data GEO bulk
185 ahg2-1abi1-1 0.60 >More info 0.08 >More info WT (Col) control Original data GEO bulk
186 Differentiation 24h 0.62 >More info 0.06 >More info Differentiation 0h leaves Original data
187 M6PR transgenic 100mM NaCl -0.55 >More info -0.12 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
188 Cells whole embryo 0.52 >More info 0.15 >More info Control for tissue data whole embryo Original data
189 root cap pGL2 3h BL -0.54 >More info -0.13 >More info root cap pGL2 0h BL brassinosteroid root Original data
190 rcf1-1 cold 12h 0.51 >More info 0.16 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
191 root longitudinal zone-4 low sulfur 0.56 >More info 0.11 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
192 CCA1-ox 6am non-polysomal 0.16 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
193 tfl1-1-16ºC -0.57 >More info -0.10 >More info WT-16ºC Original data GEO bulk
194 t-zeatin 3 h 0.69 >More info -0.02 >More info Mock 3 h Original data Basic hormone treatment of seedlings
195 AvrRpt2 Col-0 6hpi 0.50 >More info 0.16 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
196 VND6 0h 0.52 >More info 0.14 >More info wt 0h Original data GEO bulk
197 Octopus mutant DYG25 0.54 >More info 0.12 >More info WS Original data GEO bulk
198 TaFLS overexpression line (OE1) 0.53 >More info 0.13 >More info Col-0 Rosette leaves Original data
199 Chemically 0.52 >More info 0.14 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
200 roots IAA 0.63 >More info 0.03 >More info roots mock Original data GEO bulk
201 Kas -Fe 48h Shoots -0.53 >More info -0.12 >More info Kas +Fe 24h Shoots Original data GEO bulk
202 KAN1 0.53 >More info 0.12 >More info Control for tissue data shoot apical meristem Original data GEO bulk
203 shoots bhlh100/101 0uM Fe 0.51 >More info 0.14 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
204 S15-118 0.54 >More info 0.11 >More info wt Original data GEO bulk
205 hrpA 7h 0.51 >More info 0.14 >More info Mock 7h hrpA Original data GEO bulk
206 anac017-1 AntimycinA 3h -0.53 >More info -0.12 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
207 IAA 2h 0.53 >More info 0.12 >More info control 2h root Original data GEO bulk
208 2hr continuous KNO3 ECR cell 0.03 >More info 0.62 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
209 Bur-0-1h IAA 0.57 >More info 0.08 >More info Bur-0h IAA whole plant Original data GEO bulk
210 shoot-10 μM DEX- 3 hr 0.62 >More info 0.02 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
211 ice1 3H Cold 0.51 >More info 0.13 >More info WT 3H Cold Original data GEO bulk
212 L2.4 mutant 0.53 >More info 0.11 >More info Wt Original data GEO bulk
213 tor mutant glucose -0.61 >More info -0.03 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
214 GiantCell Root 0.51 >More info 0.13 >More info Control Root laser captured giant cells Original data GEO bulk
215 Col BTH -0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
216 MYB29 OE 0.57 >More info 0.07 >More info WT for MYB29/76 Original data GEO bulk
217 E2Fa-Dpa 0.56 >More info 0.07 >More info WT Original data GEO bulk
218 Nuclear GSH3 0.52 >More info 0.11 >More info Cytoplasmic GSH3 Media change Original data GEO bulk
219 root cells stele 140mM NaCl 20 hours 0.62 >More info 0.01 >More info root cells stele standard 1 hour root cells stele Original data
220 dcl2-1 -0.51 >More info -0.12 >More info Col-0 Original data GEO bulk
221 IAA 3 h 0.55 >More info 0.08 >More info Mock 3 h Original data Basic hormone treatment of seedlings
222 4h decapitation 0.51 >More info 0.12 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
223 dark +H2O2 0.12 >More info 0.51 >More info dark 5 mM H2O2 seedling Original data GEO bulk
224 Dark 40 min pls UV-A 5 min -0.51 >More info -0.11 >More info Dark 45 min Original data Light treatments
225 24h volatiles Sp. HRO-C48 0.57 >More info 0.05 >More info 24h untreated whole seedling Original data GEO bulk
226 scrm-D:mute 0.57 >More info 0.05 >More info Col-0 WT whole seedling Original data GEO bulk
227 Dark 4 h pls RedLight 1min -0.10 >More info -0.52 >More info Dark 4 h Original data Light treatments
228 Shoot apex transition (before bolting) 0.54 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
229 rao1-2 3h antimycin A -0.50 >More info -0.11 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
230 torpedo-apical 0.50 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
231 etiolated cop1 0.56 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
232 nd-1 V. longisporum-inoculated 48 hpi -0.51 >More info -0.09 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
233 Total RNA 35S:HF-RPL18 cold -0.52 >More info -0.08 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
234 MYB76 OE 0.52 >More info 0.07 >More info WT for MYB29/76 Original data GEO bulk
235 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
236 root cells stele 140mM NaCl 8 hours 0.61 >More info -0.02 >More info root cells stele standard 1 hour root cells stele Original data
237 sav3-2 shade 0.59 >More info 0.00 >More info Col-0 shade seedlings Original data GEO bulk
238 Mutant sav3-2 (SH) 0.59 >More info 0.00 >More info Col-0 (SH) Original data GEO bulk
239 BI-1-3h IAA 0.51 >More info 0.07 >More info BI-1-0h IAA whole plant Original data GEO bulk
240 Shoot apex vegetative 0.54 >More info 0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
241 15m.KCl 0.07 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
242 Col ozone 2d 0.50 >More info 0.08 >More info Col clean-air 2d ozone Original data GEO bulk
243 IAA7mII over-expressor IAA Treated -0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
244 Differentiation 36h 0.56 >More info 0.01 >More info Differentiation 0h leaves Original data
245 ddm1-2 rdr6-15 0.54 >More info 0.03 >More info Col-0 plant inflorescence Original data
246 SPT4-R3 seedlings0 DAS 0.52 >More info 0.05 >More info Col-0 seedlings0 DAS seedlings Original data
247 aux1 mutant roots air -0.50 >More info -0.07 >More info roots IAA Original data GEO bulk
248 GR-REV 120min 0.53 >More info 0.04 >More info Col 120min Original data GEO bulk
249 SIZ 0.50 >More info 0.07 >More info COL seedling Original data
250 rdr6-15 0.51 >More info 0.06 >More info Col-0 Original data GEO bulk
251 tfl1-1-23ºC 0.07 >More info 0.50 >More info WT-23ºC Original data GEO bulk
252 FLIGHT BRIC G PDFU-112 seedlings 0.60 >More info -0.03 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
253 Col-0 24hpi A. brassicicola 0.54 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
254 HRE1-RNAi20 normoxia -0.50 >More info -0.06 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
255 2hr transitory KNO3 ECR cell 0.05 >More info 0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
256 root callus inducing medium 48 h 0.61 >More info -0.05 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
257 Bur-0-30min IAA 0.60 >More info -0.04 >More info Bur-0h IAA whole plant Original data GEO bulk
258 ABA SA 3h -0.51 >More info -0.04 >More info EtOH 3h 3hr Original data GEO bulk
259 camta1-2 -0.50 >More info -0.05 >More info Col-0-WT Original data GEO bulk
260 Mutant bri1 -0.54 >More info -0.01 >More info Ws-2 Original data Comparison of plant hormone related mutant
261 root callus inducing medium 96 h 0.58 >More info -0.03 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
262 lec1-1 Globular Stage Seed 0.50 >More info 0.04 >More info Control for tissue data Original data GEO bulk
263 Col-0-avrB-6h 0.56 >More info -0.02 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
264 sdg8-2 mutant 0.55 >More info -0.01 >More info wild type leaf Original data GEO bulk
265 peripheral endosperm pre-globular 0.57 >More info -0.03 >More info whole seed sections pre-globular Original data GEO bulk
266 endosperm ABA 0.66 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
267 dcl3-1 -0.56 >More info 0.03 >More info Col-0 Original data GEO bulk
268 Differentiation 48h 0.51 >More info 0.02 >More info Differentiation 0h leaves Original data
269 penta mutant (higher order mutant) -0.54 >More info 0.01 >More info col control (higher order mutant) Original data GEO bulk
270 myb61 cork 0.52 >More info 0.01 >More info wt cork cork Original data GEO bulk
271 etiolated cop1BBX22-GFPox 0.57 >More info -0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
272 ERF96OE 0.57 >More info -0.04 >More info WT leaf Original data
273 lateral root cap-columella pBRN2 3h BL -0.58 >More info 0.06 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
274 axr1 hypocotyl -0.61 >More info 0.09 >More info wt hypocotyl hypocotyl Original data GEO bulk
275 Mutant ap2-6(flower) 0.55 >More info -0.03 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
276 WT NAA 2h 0.57 >More info -0.05 >More info WT 0h Leaf tissue Original data GEO bulk
277 stele pSHR 3h BL -0.66 >More info 0.15 >More info stele pSHR 0h BL brassinosteroid root Original data
278 embryo proper pre-globular 0.55 >More info -0.04 >More info whole seed sections pre-globular Original data GEO bulk
279 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
280 Leafminer damaged seedlings -0.06 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
281 stele pSHR 8h BL -0.52 >More info 0.03 >More info stele pSHR 0h BL brassinosteroid root Original data
282 stele pSHR 0h BL 0.52 >More info -0.04 >More info WR 35S 0h BL brassinosteroid root Original data
283 root callus inducing medium 24h 0.52 >More info -0.06 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
284 170G5-16 0.53 >More info -0.08 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
285 35S::ZAT12 0.57 >More info -0.12 >More info gl1 Original data GEO bulk
286 P.syringae AvrRpt2 4 h (leaf) 0.55 >More info -0.11 >More info Mock 4 h (leaf) Original data Elicitor treatments
287 cat2-2; 8h switch to ambient CO2 concentrations; -0.07 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
288 lateral root cap-columella pBRN2 8h BL -0.59 >More info 0.16 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
289 ISOXABEN 0.51 >More info -0.09 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
290 opr3 OPDA 0.5 h -0.14 >More info 0.56 >More info opr3 0 h Original data GEO bulk
291 Methyl Jasmonate 3 h 0.50 >More info -0.08 >More info Mock 3 h Original data Basic hormone treatment of seedlings
292 Dark 4 h pls UV-A 5 min 0.13 >More info -0.53 >More info Dark 4 h Original data Light treatments
293 root cells cortex -Fe -0.60 >More info 0.26 >More info whole roots standard Original data GEO bulk
294 ddm1-2 0.50 >More info -0.18 >More info Col-0 plant inflorescence Original data
295 SHR-GR Time 12H Dex 0.50 >More info -0.19 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
296 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
297 Red/FR Light45min -0.31 >More info 0.54 >More info FarRed Light 45min Original data Light treatments
298 opr3 OPDA 22 h -0.52 >More info 0.31 >More info opr3 0 h Original data GEO bulk
299 G3P 0.29 >More info -0.50 >More info Mock distal leaves Original data GEO bulk