4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on atmyc2 cop1 Seedling BL
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Score Experiment Correlation from
atmyc2 cop1 Seedling BL		 Correlation to
atmyc2 cop1 Seedling BL		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 atmyc2 cop1 Seedling BL 1.00 >More info 1.00 >More info WT Seedling BL Original data GEO bulk
2 cop1 Seedling BL 0.96 >More info 0.94 >More info WT Seedling BL Original data GEO bulk
3 ice1 control 0.83 >More info 0.73 >More info WT control Original data GEO bulk
4 cop1 Seedling BL+ABA 0.73 >More info 0.82 >More info WT Seedling BL+ABA Original data GEO bulk
5 ice1 6H Cold 0.81 >More info 0.67 >More info WT 6H Cold Original data GEO bulk
6 WT Seedling BL+ABA 0.80 >More info 0.67 >More info WT Seedling BL Original data GEO bulk
7 csn4-1 mutant 0.74 >More info 0.73 >More info WT dark Original data GEO bulk
8 csn5 (csn5a-2 csn5b) light 0.81 >More info 0.63 >More info WT light Original data GEO bulk
9 ice1 3H Cold 0.81 >More info 0.62 >More info WT 3H Cold Original data GEO bulk
10 csn3-1 light 0.76 >More info 0.64 >More info WT light Original data GEO bulk
11 toc1-1-57hr 0.76 >More info 0.63 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
12 ice1 24H Cold 0.72 >More info 0.65 >More info WT 24H Cold Original data GEO bulk
13 csn3-1 dark 0.66 >More info 0.69 >More info WT dark Original data GEO bulk
14 smg7b-1 0.77 >More info 0.55 >More info WT whole plant Original data GEO bulk
15 csn5 (csn5a-2 csn5b) dark 0.63 >More info 0.69 >More info WT dark Original data GEO bulk
16 9 hr Hypoxia 1 hr recovery Total RNA 0.66 >More info 0.65 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
17 atmyc2 Seedling BL 0.56 >More info 0.74 >More info WT Seedling BL Original data GEO bulk
18 Mutant cry1 (High Light) -0.70 >More info -0.60 >More info Col-0 (High Light) Original data GEO bulk
19 gh3.5-1D 48 hpi 0.73 >More info 0.57 >More info Col-0 uninoculated Original data GEO bulk
20 cry1 high light -0.70 >More info -0.60 >More info Col-O high light Original data GEO bulk
21 Mutant gh3.5-1D (AvrRpt2) 0.71 >More info 0.56 >More info Col-0 (AvrRpt2) Original data GEO bulk
22 AFB1 0h 0.65 >More info 0.61 >More info Col 0h Leaf Original data GEO bulk
23 sni1 0.64 >More info 0.61 >More info WT Original data GEO bulk
24 sdg2 0.68 >More info 0.56 >More info wt seedling Original data GEO bulk
25 upf3 0.69 >More info 0.54 >More info WT whole plant Original data GEO bulk
26 toc1-1-81hr 0.69 >More info 0.54 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
27 DC3000 24h 0.64 >More info 0.59 >More info Mock 24h DC3000 Original data GEO bulk
28 Heat and anoxia 0.65 >More info 0.56 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
29 Mutant axr3-1 0.66 >More info 0.55 >More info Col Original data GEO bulk
30 Col0-PsmES4326-24hpi 0.60 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
31 toc1-1-85hr 0.66 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
32 9 hr Hypoxia 1 hr recovery IP RNA 0.64 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
33 upf1 0.62 >More info 0.58 >More info WT whole plant Original data GEO bulk
34 toc1-1-69hr 0.58 >More info 0.62 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
35 Mature callus 0.62 >More info 0.57 >More info Young callus hypocotyls Original data GEO bulk
36 PBZ 0.52 >More info 0.66 >More info none PBZ Rosette Original data GEO bulk
37 ceh1 mutant 0.63 >More info 0.55 >More info Parent line Original data
38 RRE2 Chitin 0.62 >More info 0.55 >More info Chitin Original data GEO bulk
39 Sulfometuron EC50 0.61 >More info 0.56 >More info Carrier Original data GEO bulk
40 toc1-1-53hr 0.64 >More info 0.53 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
41 ARR22-ox (t-zeatin 3 h) 0.63 >More info 0.53 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
42 toc1-1-65hr 0.64 >More info 0.51 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
43 CMP 4hr 0.61 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
44 9 hr Hypoxia Total RNA 0.61 >More info 0.54 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
45 Col ozone 2d 0.67 >More info 0.48 >More info Col clean-air 2d ozone Original data GEO bulk
46 amiR-tor induced 3d 0.55 >More info 0.60 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
47 6h +Pi -0.59 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
48 scrm-D 0.66 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
49 miR 0h 0.54 >More info 0.60 >More info Col 0h Leaf Original data GEO bulk
50 edr1 18 h powdery mildew 0.63 >More info 0.51 >More info Col-0 18 h powdery mildew Original data GEO bulk
51 Col-0 under 4 days salt 0.67 >More info 0.46 >More info Col-0 under control 4 days salt treatment rosette Original data
52 Col BTH 0.46 >More info 0.67 >More info Col rosettes Original data GEO bulk
53 AtLysM RLK1 mutant water 0.53 >More info 0.60 >More info WT water Original data GEO bulk
54 Leafminer damaged seedlings 0.56 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
55 R. solani AG2-1 0.58 >More info 0.54 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
56 Starch sheath 5 days MS incubation 0.53 >More info 0.59 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
57 LTN008-2 aza-dc 0.67 >More info 0.45 >More info LTN012-2 Mock Original data
58 arp6-10 12 ºC 0.48 >More info 0.64 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
59 sfr3 cold 0.46 >More info 0.65 >More info WT cold All aerial tissue Original data GEO bulk
60 SA 0.59 >More info 0.52 >More info WT mock Whole seedling Original data GEO bulk
61 Imidazolinone EC50 0.56 >More info 0.54 >More info Carrier (Imidazolinone) Original data GEO bulk
62 bak1-3 +Pep2 10h 0.61 >More info 0.49 >More info WT +Pep2 10h Pep2 Original data GEO bulk
63 35S:RPS4 eds1-2 24h -0.66 >More info -0.43 >More info 35S:RPS4 24h leaves Original data
64 BLM+INA 0.55 >More info 0.54 >More info CK BLM and INA seedling Original data
65 Col-0 DCA 48h 0.50 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
66 Nicotinamide-81hr 0.63 >More info 0.45 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
67 9 hr Hypoxia IP RNA 0.58 >More info 0.50 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
68 Anoxia 0.54 >More info 0.54 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
69 Nicotinamide-57hr 0.65 >More info 0.43 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
70 Selenate (shoot) 0.47 >More info 0.61 >More info Ws (shoot) Original data GEO bulk
71 Shoot Selenate 0.47 >More info 0.61 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
72 toc1-1-49hr 0.62 >More info 0.45 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
73 cpr5npr1 0.66 >More info 0.41 >More info WT(COL) Original data GEO bulk
74 WT-NOCO2 INFECTED 0.63 >More info 0.44 >More info WT-MOCK Original data GEO bulk
75 HopZ1a treated ulp1c ulp1d 0.61 >More info 0.46 >More info col Original data GEO bulk
76 aox1a(line) MLD stressed 0.52 >More info 0.55 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
77 myb3 myb3r4d 0.40 >More info 0.67 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
78 del1-1 mutant 5d uninfected 0.60 >More info 0.46 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
79 BLM 0.54 >More info 0.52 >More info CK BLM seedling Original data
80 CMV-WT 0.65 >More info 0.41 >More info Mock-At Aerial tissues Original data GEO bulk
81 smg5-2 0.60 >More info 0.46 >More info WT whole plant Original data GEO bulk
82 WT-SA 0.56 >More info 0.50 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
83 UV 0.53 >More info 0.53 >More info WT aerial region Original data GEO bulk
84 4d red light grown hmr-5 seedlings 0.63 >More info 0.43 >More info 4d red light grown WT(Col-0) seedlings Original data
85 B.cinerea 18 h infection 0.58 >More info 0.48 >More info Mock 18 h Original data Botrytis cinerea infection
86 Botrytis cinerea 18h 0.58 >More info 0.48 >More info control 18h Original data GEO bulk
87 Light 0.5h polysome-bound 0.54 >More info 0.51 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
88 toc1-1-77hr 0.65 >More info 0.40 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
89 Nicotinamide-49hr 0.53 >More info 0.52 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
90 cpr5 0.67 >More info 0.38 >More info WT(COL) Original data GEO bulk
91 Col-O high light 0.52 >More info 0.53 >More info Col-O bule light Original data GEO bulk
92 toc1-1-73hr 0.54 >More info 0.51 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
93 ASL9-ox -0.60 >More info -0.45 >More info WT aerial parts of seedlings Original data GEO bulk
94 IMI 4mM 0.64 >More info 0.41 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
95 dicamba 0.53 >More info 0.52 >More info WT mock whole seedling Original data GEO bulk
96 FarRed Light 4 h 0.41 >More info 0.64 >More info White Light 4 h Original data Light treatments
97 Cs shoot -0.58 >More info -0.47 >More info control shoot Original data GEO bulk
98 Atwrky63 -0.67 >More info -0.37 >More info Col0 none leaf Original data GEO bulk
99 etiolated cop1BBX22-GFPox 0.50 >More info 0.54 >More info etiolated Col-0 whole seedlings Original data GEO bulk
100 Col-0 INA 48h 0.54 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
101 Pst-DC3000(avrRpm1)-4hpi 0.53 >More info 0.51 >More info Pst-DC3000-4hpi Original data GEO bulk
102 Dark 40 min pls UV-A 5 min 0.51 >More info 0.53 >More info Dark 45 min Original data Light treatments
103 Elevated CO2 AMPLE N DAY 0.56 >More info 0.48 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
104 OH1 0.60 >More info 0.44 >More info Col-0 leaves Original data GEO bulk
105 Nicotinamide-65hr 0.63 >More info 0.41 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
106 penta Alternaria 3dpi 0.58 >More info 0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
107 8h-DC3000 avrRpm1 0.59 >More info 0.45 >More info 8h-DC3000 leaves Original data GEO bulk
108 Chitosan 3h Treatment 0.62 >More info 0.42 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
109 hai1-2 low water potential 0.49 >More info 0.55 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
110 Elevated CO2 fully expanded leaf 0.60 >More info 0.43 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
111 Mutant nph4-1_arf19-1 0.56 >More info 0.47 >More info Col Original data GEO bulk
112 Heat 0.52 >More info 0.51 >More info Control 90 minutes at 38°C. Original data GEO bulk
113 npr1-3 DCA 48h 0.56 >More info 0.47 >More info npr1-3 MOCK 48h Original data GEO bulk
114 csn4-1 dark 0.58 >More info 0.45 >More info WT light Original data GEO bulk
115 SA 4mM 0.67 >More info 0.36 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
116 DFPM 0.62 >More info 0.40 >More info control Original data GEO bulk
117 WT 2-4h Xanthomonas 0.57 >More info 0.44 >More info WT T0 Original data GEO bulk
118 WT 30μM arsenate 8 hours. 0.53 >More info 0.48 >More info WT control (not supplemented). Original data
119 46T-CK 0.61 >More info 0.40 >More info WT-CK none Original data
120 Osmotic Stress 24 h (shoot) 0.57 >More info 0.43 >More info Stress mock 24 h (shoot) Original data Stress treatments
121 Mutant iaa17-6 0.53 >More info 0.47 >More info Col Original data GEO bulk
122 toc1-1-89hr 0.58 >More info 0.42 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
123 Dark 40min pls UV-AB 5min 0.51 >More info 0.49 >More info Dark 45 min Original data Light treatments
124 CMP 24hr 0.58 >More info 0.42 >More info Acetone 24hr root Original data GEO bulk
125 Col-0-avrB-6h 0.58 >More info 0.42 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
126 Col-0 wt Hypoxic 0.46 >More info 0.54 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
127 FOX line K16331 0.60 >More info 0.39 >More info empty vector control (T3) FOX lines Original data GEO bulk
128 CMV-A2b mutant 0.63 >More info 0.36 >More info Mock-At Aerial tissues Original data GEO bulk
129 pepr1-1 Pepr2-3 +Pep2 2h -0.50 >More info -0.49 >More info WT +Pep2 2h Pep2 Original data GEO bulk
130 Laer Alternaria 3dpi -0.47 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
131 GR-REV 30min 0.49 >More info 0.50 >More info Col 30min Original data GEO bulk
132 phyB Rc50 0.53 >More info 0.45 >More info WT(Ler) Rc50 Original data GEO bulk
133 UV Stress 24 h (shoot) 0.54 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
134 pnp1-1 1wk +P 0.50 >More info 0.48 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
135 Mutant ga1-5 -0.40 >More info -0.58 >More info Ler-1 Original data Comparison of plant hormone related mutant
136 RRE1 Chitin 0.57 >More info 0.40 >More info Chitin Original data GEO bulk
137 gun4-1 0.57 >More info 0.40 >More info WT Col-0 seedling Original data GEO bulk
138 Blue Light 4 h 0.41 >More info 0.56 >More info White Light 4 h Original data Light treatments
139 rrd2 IBA -0.34 >More info -0.63 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
140 AgNO3 3 h 0.56 >More info 0.40 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
141 Nicotinamide-61hr 0.58 >More info 0.38 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
142 Col-0 48 hpi 0.54 >More info 0.42 >More info Col-0 uninoculated Original data GEO bulk
143 A. thaliana-A. lyrata hybrid -0.67 >More info -0.29 >More info A. thaliana mature leaves before flowering Original data GEO bulk
144 JA 3h 0.44 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
145 cdpk6-yfp 0.43 >More info 0.53 >More info Kan seedlings Original data GEO bulk
146 Shoot -Cs 0.32 >More info 0.64 >More info Control-shoot Original data GEO bulk
147 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.35 >More info -0.61 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
148 NJ15 0.41 >More info 0.55 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
149 embryo paclobutrazol 0.56 >More info 0.39 >More info embryo-control paclobutrazol embryo Original data GEO bulk
150 R. solani AG8 0.39 >More info 0.56 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
151 sav1-1 light 0.59 >More info 0.36 >More info Col-0 light seedlings Original data GEO bulk
152 des1 water 0.51 >More info 0.44 >More info WT water water leaf Original data GEO bulk
153 pmr5 0.52 >More info 0.43 >More info Col-0 Original data GEO bulk
154 lht1 PstDC3000 48h 0.58 >More info 0.37 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
155 SLWF infested 0.62 >More info 0.33 >More info SLWF uninfested rosette tissue Original data GEO bulk
156 ubc13A -Fe -0.50 >More info -0.45 >More info Col -Fe root Original data GEO bulk
157 Mutant axr3-1 (IAA) 0.42 >More info 0.53 >More info Col (IAA) Original data GEO bulk
158 JA 0.44 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
159 Triazolopyrimidine EC50 0.45 >More info 0.50 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
160 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.36 >More info -0.59 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
161 hy5 low light -0.58 >More info -0.36 >More info Col-O low light Original data GEO bulk
162 Mutant hy5 -0.58 >More info -0.36 >More info Col-0 Original data GEO bulk
163 SAM SE 35S:AGL15 -0.62 >More info -0.32 >More info SAM SE Col Original data GEO bulk
164 rpoTmp(line) MLD stressed 0.43 >More info 0.51 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
165 spx1 spx2 complete 0.56 >More info 0.37 >More info WT complete seedlings Original data
166 Dark 44min pls RedLigh 1min 0.38 >More info 0.55 >More info Dark 45 min Original data Light treatments
167 albino Ds13-2198-1 -0.58 >More info -0.35 >More info control Original data GEO bulk
168 pepr1-1 Pepr2-3 +Pep2 10h -0.51 >More info -0.42 >More info WT +Pep2 10h Pep2 Original data GEO bulk
169 aba2 1% sucrose 12-day-old -0.31 >More info -0.62 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
170 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.40 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
171 cpr5scv1 0.64 >More info 0.28 >More info WT(COL) Original data GEO bulk
172 overexpresser LBD38 in -N -0.52 >More info -0.40 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
173 hira-root -0.52 >More info -0.40 >More info WT-root root Original data
174 Mutant siz1-3 0.55 >More info 0.37 >More info Col-0 Original data GEO bulk
175 siz1-3 control 0.55 >More info 0.37 >More info Col-0 control Original data GEO bulk
176 edr1 36 h powdery mildew 0.53 >More info 0.39 >More info Col-0 36 h powdery mildew Original data GEO bulk
177 sfr3 control 0.52 >More info 0.40 >More info WT control All aerial tissue Original data GEO bulk
178 HopZ1a treated 0.55 >More info 0.37 >More info col Original data GEO bulk
179 cat2-hCO2 -0.58 >More info -0.34 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
180 lht1 untreated 0.50 >More info 0.42 >More info WT untreated untreated leaf Original data GEO bulk
181 etiolated atbzip16 0.62 >More info 0.30 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
182 Salt Stress 24 h (shoot) 0.51 >More info 0.40 >More info Stress mock 24 h (shoot) Original data Stress treatments
183 Lipopolysaccaride4 h (leaf) 0.53 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
184 Leafminer locally damaged thaliana seedlings 0.56 >More info 0.34 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
185 pho1 0.54 >More info 0.36 >More info Col2WT Original data GEO bulk
186 seedlings-week-old RECA1-overexpressing
transgenic		 0.62 >More info 0.28 >More info seedlings-week-old Col-0 seedlings Original data
187 WT-16ºC -0.36 >More info -0.54 >More info WT-23ºC Original data GEO bulk
188 SAM SE agl15 agl18 double mutant -0.38 >More info -0.52 >More info SAM SE Col Original data GEO bulk
189 gun1-9 norflurazon 0.57 >More info 0.33 >More info gun1-9 control Original data GEO bulk
190 WT chitooctaose 0.57 >More info 0.33 >More info WT water Original data GEO bulk
191 cngc4 0.55 >More info 0.34 >More info Ws-2 Seedlings Original data GEO bulk
192 CAX1/CAX3 mutant 0.62 >More info 0.27 >More info Col whole plant Original data GEO bulk
193 Tsu -Fe 48h Shoots 0.58 >More info 0.31 >More info Tsu +Fe 24h Shoots Original data GEO bulk
194 cys-c1 leaf -0.54 >More info -0.34 >More info Leaf-WT leaves Original data GEO bulk
195 ARR21C-ox 0.55 >More info 0.33 >More info Col-0 Original data ARR21C overexpression
196 leaf rlt1-1rlt2-1 -0.52 >More info -0.36 >More info leaf Col-0 leaf Original data GEO bulk
197 Myzus persicae saliva 0.51 >More info 0.37 >More info Control Original data GEO bulk
198 aphid saliva treated 0.51 >More info 0.37 >More info control aphid saliva treated leaves Original data GEO bulk
199 rcf1-1 cold 0h 0.52 >More info 0.36 >More info WT cold 0h Control seedlings Original data GEO bulk
200 anac017-2 AntimycinA 3h -0.57 >More info -0.31 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
201 Pto inoculated 0.53 >More info 0.34 >More info col Original data GEO bulk
202 WT Atum 1h 0.51 >More info 0.36 >More info WT 0h Leaf tissue Original data GEO bulk
203 pvip1 pvip2 0.60 >More info 0.27 >More info Col-0 whole rosettes Original data GEO bulk
204 long 17-degree- 0.28 >More info 0.59 >More info control long Original data GEO bulk
205 Heat shock optimum 0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
206 bio4-1 mutant leaves 0.56 >More info 0.30 >More info WT leaves leaves Original data GEO bulk
207 WT AntimycinA 3h 0.52 >More info 0.34 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
208 Methyl Jasmonate 1 h 0.34 >More info 0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
209 GO5; 0h switch to ambient CO2 concentrations; -0.51 >More info -0.35 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
210 plant (Col-0) 4h OPDA 0.51 >More info 0.35 >More info plant (Col-0) 4h control Original data GEO bulk
211 erf5 erf6 -0.60 >More info -0.26 >More info WT+water water seedlings Original data GEO bulk
212 OPDA 4 h 0.51 >More info 0.35 >More info Col-0 Original data GEO bulk
213 WT +Pep2 2h 0.51 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
214 eds16 whole leaf 5dpi -0.55 >More info -0.30 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
215 embryo ABA 0.51 >More info 0.34 >More info embryo-control ABA embryo Original data GEO bulk
216 Root submergence 7h 0.54 >More info 0.31 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
217 atmyc2 Seedling Dark -0.33 >More info -0.52 >More info WT Seedling Dark Original data GEO bulk
218 Nicotinamide-53hr 0.50 >More info 0.35 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
219 Osmotic Stress 24 h (root) 0.50 >More info 0.35 >More info Stress mock 24 h (root) Original data Stress treatments
220 bri1-116 0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
221 shoots bhlh100/101 0uM Fe 0.56 >More info 0.28 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
222 gun5 norflurazon 0.52 >More info 0.32 >More info gun5 control Original data GEO bulk
223 Mutant hy5 (High Light) -0.50 >More info -0.34 >More info Col-0 (High Light) Original data GEO bulk
224 hy5 high light -0.50 >More info -0.34 >More info Col-O high light Original data GEO bulk
225 ERF96OE 0.51 >More info 0.33 >More info WT leaf Original data
226 cpr5 0.57 >More info 0.27 >More info WT seedling Original data GEO bulk
227 mkk1/mkk2 24h BTH rep 0.59 >More info 0.25 >More info Col-0 24h BTH rep Original data GEO bulk
228 20d after anthesis 0.52 >More info 0.31 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
229 PNO8 3 h 0.50 >More info 0.33 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
230 P.p 30hai 0.53 >More info 0.30 >More info At-Control roots Original data GEO bulk
231 bZIP1ko mutant N+Light- 0.56 >More info 0.27 >More info WT-sib N+Light- whole plant Original data GEO bulk
232 Red/FR Light 4 h -0.20 >More info -0.63 >More info FarRed Light 4 h Original data Light treatments
233 mkk1 control rep -0.29 >More info -0.54 >More info Col-0 Time 0 rep Original data GEO bulk
234 Nicotinamide-89hr 0.59 >More info 0.24 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
235 cpr5npr1svi1 0.57 >More info 0.26 >More info WT(COL) Original data GEO bulk
236 npr1 sni1 ssn2 -0.53 >More info -0.29 >More info npr1 sni1 water water seedling Original data GEO bulk
237 hrpA 7h 0.53 >More info 0.29 >More info Mock 7h hrpA Original data GEO bulk
238 detached inflorescences 24h 0.50 >More info 0.31 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
239 Mutant siz1-3 (Drought) 0.52 >More info 0.29 >More info Col-0 (Drought) Original data GEO bulk
240 WT +Pep2 10h 0.54 >More info 0.27 >More info WT untreated Pep2 Original data GEO bulk
241 siz1-3 drought 0.52 >More info 0.29 >More info Col-0 drought Original data GEO bulk
242 current injection 0.30 >More info 0.51 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
243 Nicotinamide-93hr 0.55 >More info 0.25 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
244 plant (tga2-5-6) 4h OPDA 0.51 >More info 0.29 >More info plant (tga2-5-6) 4h control Original data GEO bulk
245 toc1-1-61hr 0.52 >More info 0.28 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
246 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.28 >More info -0.52 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
247 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
248 mil4 BTH 0.55 >More info 0.24 >More info Col BTH rosettes Original data GEO bulk
249 scrm-D:mute 0.54 >More info 0.25 >More info Col-0 WT whole seedling Original data GEO bulk
250 sfr6 control -0.54 >More info -0.25 >More info WT control All aerial tissue Original data GEO bulk
251 ABA DFPM 0.50 >More info 0.29 >More info control Original data GEO bulk
252 L2.4 mutant 0.29 >More info 0.50 >More info Wt Original data GEO bulk
253 Nuclear GSH3 -0.54 >More info -0.24 >More info Cytoplasmic GSH3 Media change Original data GEO bulk
254 ex1ex2flu dark 8hours/30 minute light -0.51 >More info -0.27 >More info col dark 8hours/30 minute light Original data GEO bulk
255 GST 4 h (leaf) 0.50 >More info 0.28 >More info Mock 4 h (leaf) Original data Elicitor treatments
256 agb1 gpa1 -ABA LF -0.16 >More info -0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
257 bri1-5 mutant 0.28 >More info 0.50 >More info WT 7 day-old whole seedlings Original data
258 anac017-1 H2O2 3h -0.51 >More info -0.26 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
259 Col-0 C2H4 24h 0.54 >More info 0.23 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
260 atmospheric CO2 low Mg shoot 0.55 >More info 0.22 >More info atmospheric CO2 normal Mg shoot Shoot Original data
261 GA3 3 h (ga1) -0.22 >More info -0.55 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
262 CLO 4mM 0.65 >More info 0.11 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
263 FarRed Light 45min -0.09 >More info -0.67 >More info White Light 45min Original data Light treatments
264 Red/FR Light45min 0.20 >More info 0.56 >More info FarRed Light 45min Original data Light treatments
265 dark +H2O2 0.20 >More info 0.56 >More info dark 5 mM H2O2 seedling Original data GEO bulk
266 AFB1 0h 0.50 >More info 0.25 >More info WT 0h Leaf tissue Original data GEO bulk
267 rosette Dark Wounded 0.22 >More info 0.53 >More info rosette Dark Control Original data GEO bulk
268 35S-MIF1 light grown 0.54 >More info 0.20 >More info Light-grown WT control Original data GEO bulk
269 anac017-2 H2O2 3h -0.52 >More info -0.22 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
270 Split KNO3 roots - 8hours -0.17 >More info -0.56 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
271 0h ivd 0.61 >More info 0.12 >More info 0h wt Original data
272 sim smr1 -0.21 >More info -0.52 >More info WT seedling Original data GEO bulk
273 IRP1-OE-Fe--shoot 0.55 >More info 0.17 >More info COL-0-Fe--shoot shoot Original data
274 SOS1 0mM NaCl 0.51 >More info 0.21 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
275 sid2-1 cold -0.50 >More info -0.21 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
276 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
277 pif5 high R/FR 0.15 >More info 0.55 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
278 Leaf wounded 0.17 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
279 downy mildew cotyledons late stage 0.59 >More info 0.11 >More info mock inoculated Cotyledons Original data GEO bulk
280 sta1 0.55 >More info 0.14 >More info WT Original data GEO bulk
281 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
282 Nicotinamide-85hr 0.51 >More info 0.18 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
283 root - 04% oxygen - 2h -0.02 >More info 0.71 >More info root - 21% oxygen - 2h Original data GEO bulk
284 sfr6 cold 0.08 >More info 0.60 >More info WT cold All aerial tissue Original data GEO bulk
285 Col whole leaf 7dpi 0.51 >More info 0.16 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
286 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
287 Nicotinamide-73hr 0.50 >More info 0.17 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
288 Red Light 4 h -0.05 >More info -0.61 >More info White Light 4 h Original data Light treatments
289 det2 light-dark -0.15 >More info -0.51 >More info det2 light light-dark Original data GEO bulk
290 SA Treated 0.58 >More info 0.08 >More info Water Original data GEO bulk
291 Shoot apex inflorescence (after bolting) -0.00 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
292 Senescing leaf 0.58 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
293 del1-1 5dpi 0.52 >More info 0.11 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
294 Sepals stage15 0.54 >More info 0.09 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
295 E.coli TUV86 2 fliC 7h 0.53 >More info 0.09 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
296 vte2 leaves 120h LT 0.56 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
297 Ibuprofen 3 h 0.55 >More info 0.04 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
298 AGL24 induced 0.09 >More info 0.50 >More info WT-ESTRADIOL Original data GEO bulk
299 WT roots - Fe 0.51 >More info 0.07 >More info WT roots + Fe Roots Original data GEO bulk
300 P.p 6hai 0.50 >More info 0.08 >More info At-Control roots Original data GEO bulk
301 OsTOP6B ox 0.50 >More info 0.07 >More info WT Original data GEO bulk
302 scl3 0.56 >More info 0.01 >More info Col-0 whole root Original data GEO bulk
303 glk1 glk2 GLK1-GR +DEX 4h 0.53 >More info 0.03 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
304 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.52 >More info -0.02 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
305 mkk1 24h BTH rep 0.06 >More info -0.59 >More info Col-0 24h BTH rep Original data GEO bulk
306 seedling 3h after Gamma WT -0.01 >More info 0.54 >More info seedling day 1 unirradiated WT 3h Original data
307 gpa1 -ABA LF 0.08 >More info -0.60 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
308 treated group 0.57 >More info -0.06 >More info Control group Original data
309 Col PSTDC3000 24h 0.64 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
310 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
311 pvip1 pvip2 seedling 0.50 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
312 Laer pretreat GA Flg22 1h -0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
313 E.coli 0157 H7 7h 0.55 >More info -0.10 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
314 P. infestans 6 h (leaf) 0.50 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
315 SHR-GR Time 6H Dex 0.20 >More info -0.51 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
316 4d red light grown hmr-22 seedlings 0.51 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data