4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on PNO8 3 h
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "PNO8 3 h "  Help Download transcriptome of top 30
Score Experiment Correlation from
PNO8 3 h 		Correlation to
PNO8 3 h 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 PNO8 3 h 1.00 >More info 1.00 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
2 5-Triiodobenzoic acid3 h 0.88 >More info 0.78 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
3 Propiconazole 3 h 0.74 >More info 0.87 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
4 6-trichlorophenoxyacetic acid 3 h 0.75 >More info 0.83 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 AgNO3 3 h 0.83 >More info 0.74 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
6 Uniconazole 3 h 0.76 >More info 0.79 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
7 Ibuprofen 3 h 0.79 >More info 0.75 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
8 Fenclorim 4hr 0.84 >More info 0.69 >More info Acetone 4hr root Original data GEO bulk
9 Naphthyl- phthalamic acid 3 h 0.74 >More info 0.78 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
10 MG132 3 h 0.65 >More info 0.85 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
11 inhibitor A Treated 0.83 >More info 0.66 >More info Negative Control Original data GEO bulk
12 P-chlorophenoxy- isobutyric acid 3 h 0.72 >More info 0.74 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
13 inhibitor B Treated 0.71 >More info 0.74 >More info Negative Control Original data GEO bulk
14 oligomycin 1 h 0.75 >More info 0.70 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
15 Whole root - S 3H 0.73 >More info 0.71 >More info Whole root - S 0H Original data GEO bulk
16 Phytoprostane A1 4 h 0.77 >More info 0.66 >More info Col-0 Original data GEO bulk
17 plant (Col-0) 4h phytoprostane A1 0.75 >More info 0.67 >More info plant (tga2-5-6) 4h control Original data GEO bulk
18 TNT-seedlings 0.74 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
19 B.cinerea 18 h infection 0.71 >More info 0.66 >More info Mock 18 h Original data Botrytis cinerea infection
20 Botrytis cinerea 18h 0.71 >More info 0.66 >More info control 18h Original data GEO bulk
21 CMP 4hr 0.71 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
22 IAA/inhibitor B Treated 0.68 >More info 0.64 >More info IAA Treated Original data GEO bulk
23 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.80 >More info 0.52 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
24 (Ws-2)+100 uM As 0.72 >More info 0.60 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
25 plant (tga2-5-6) 4h phytoprostane A1 0.76 >More info 0.54 >More info plant (tga2-5-6) 4h control Original data GEO bulk
26 Daminozide 3 h 0.53 >More info 0.76 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
27 Paclobutrazol 3 h 0.52 >More info 0.77 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
28 R. solani AG8 0.70 >More info 0.59 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
29 Seedling KUA1-IOX est 0.64 >More info 0.64 >More info Seedling KUA1-IOX mock Original data
30 9 hr Hypoxia IP RNA 0.74 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
31 oligomycin 4 h 0.70 >More info 0.56 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
32 dicamba 0.77 >More info 0.49 >More info WT mock whole seedling Original data GEO bulk
33 SCR-GR Time 3H Dex 0.76 >More info 0.49 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
34 flu 0.67 >More info 0.55 >More info WT Col Original data GEO bulk
35 WT+H2O2 0.54 >More info 0.68 >More info WT H2O2 Original data GEO bulk
36 COL-0-Fe--root 0.68 >More info 0.54 >More info COL-0-Ctrl--root root Original data
37 Fenclorim 24hr 0.70 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
38 JA 0.74 >More info 0.47 >More info Col-0 mock Whole seedling Original data GEO bulk
39 DFPM 0.75 >More info 0.46 >More info control Original data GEO bulk
40 flu over-tAPX 0.70 >More info 0.51 >More info WT Col Original data GEO bulk
41 Cycloheximide 3 h 0.63 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
42 Hydrogen Peroxide 500 uM 0.56 >More info 0.63 >More info Control RB and PER Hydrogen Peroxide Original data
43 cat2-2; 8h switch to ambient CO2 concentrations; 0.63 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
44 35S::PI ap3-3 35S::AP-GR +DEX 0.39 >More info 0.79 >More info 0hr DEX Original data GEO bulk
45 GST 4 h (leaf) 0.70 >More info 0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
46 Col-0 low oxygen 0.63 >More info 0.54 >More info Col-0 control low oxygen root Original data GEO bulk
47 SA 0.66 >More info 0.51 >More info WT mock Whole seedling Original data GEO bulk
48 pepr1-1 Pepr2-3 +Pep2 2h -0.64 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
49 cat2-short-day 2d 0.67 >More info 0.50 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
50 sid2-2 9 hpi A. brassicicola 0.69 >More info 0.48 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
51 Col-0 9 hpi A. brassicicola 0.67 >More info 0.49 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
52 seedling 1.5h after Gamma atm-1 0.61 >More info 0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
53 COL-0-Fe--shoot 0.51 >More info 0.65 >More info COL-0-Ctrl--shoot shoot Original data
54 PAHs stress 0.71 >More info 0.45 >More info exp control phenanthrene whole plants Original data GEO bulk
55 ARR22-ox (t-zeatin 3 h) 0.70 >More info 0.46 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
56 msh1 albino 0.71 >More info 0.44 >More info WT aerial part Original data GEO bulk
57 9 hr Hypoxia Total RNA 0.57 >More info 0.58 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
58 9 hr Hypoxia 1 hr recovery Total RNA 0.60 >More info 0.54 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
59 WT 3h -P 0.51 >More info 0.63 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
60 Col-0 V. longisporum-inoculated 48 hpi 0.61 >More info 0.52 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
61 safener treated 0.62 >More info 0.51 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
62 Col whole leaf 5dpi 0.62 >More info 0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
63 9 hr Hypoxia 1 hr recovery IP RNA 0.66 >More info 0.47 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
64 Tsu -Fe 48h Shoots 0.63 >More info 0.50 >More info Tsu +Fe 24h Shoots Original data GEO bulk
65 chito-tetramer 0.67 >More info 0.45 >More info Col Mock Original data GEO bulk
66 GST NPP1 4 h (leaf) 0.66 >More info 0.46 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 root Dosed gold 0.63 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
68 0.125 mM gold 24 h 0.63 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
69 pmr5 pmr6 0.60 >More info 0.51 >More info Col-0 Original data GEO bulk
70 cell culture 4 h phytoprostane A1 0.51 >More info 0.60 >More info cell culture 4 h control Original data GEO bulk
71 cat2-short-day 4d 0.60 >More info 0.51 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
72 Col ozone 3h 0.50 >More info 0.61 >More info Col clean-air 3h ozone Original data GEO bulk
73 Col-Luc WT 3h antimycin A 0.62 >More info 0.49 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
74 TiO2 germinant -0.71 >More info -0.39 >More info Millipore Water germinant TiO2 seedling Original data
75 seedlings protease IV 0.67 >More info 0.43 >More info seedlings nontreated control whole seedling Original data
76 Col-0 overexpressing At1g54160 control 0.62 >More info 0.48 >More info WT no treatement Original data GEO bulk
77 At1g54160 ox 0.62 >More info 0.48 >More info Col-0 Original data GEO bulk
78 dde2-2 9 hpi A. brassicicola 0.64 >More info 0.45 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
79 Col-0 ozone 0.65 >More info 0.44 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
80 Light 0.57 >More info 0.52 >More info Control Original data GEO bulk
81 GO5; 8h switch to ambient CO2 concentrations; 0.51 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
82 seedling 24h after Gamma atm-1 0.60 >More info 0.48 >More info seedling day 2 unirradiated atm-1 24h Original data
83 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.65 >More info 0.42 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
84 SCR-GR Time 1H Dex 0.80 >More info 0.27 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
85 Te ozone 0.63 >More info 0.44 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
86 coi1-16 ein2 sid2 ctrl -0.68 >More info -0.39 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
87 Selenate (shoot) 0.69 >More info 0.38 >More info Ws (shoot) Original data GEO bulk
88 Shoot Selenate 0.69 >More info 0.38 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
89 (Col-0)+100 uM As 0.59 >More info 0.47 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
90 WT +Pep2 2h 0.71 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
91 IAA/inhibitor A Treated 0.66 >More info 0.39 >More info IAA Treated Original data GEO bulk
92 miR393 flg22 1h 0.59 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
93 Col whole leaf 5 dpi 0.51 >More info 0.54 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
94 hrpA fliC 7h 0.61 >More info 0.44 >More info Mock 7h hrpA fliC Original data GEO bulk
95 whole roots -Fe 48 hour 0.44 >More info 0.61 >More info whole roots standard Original data GEO bulk
96 WT AntimycinA 3h 0.57 >More info 0.48 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
97 ckh1 CK200 0.52 >More info 0.52 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
98 (Col-0)+200 uM As 0.58 >More info 0.46 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
99 +1.6 mM Tween 20 1 h. 0.57 >More info 0.47 >More info +distilled water 1 h. Original data GEO bulk
100 gpa1-4/agb1-2 clean-air 2d 0.74 >More info 0.30 >More info Col clean-air 2d clean-air Original data GEO bulk
101 6h +Pi -0.63 >More info -0.41 >More info 6h -Pi root Original data GEO bulk
102 Col0-PsmES4326-24hpi 0.43 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
103 Tsu-1 -Fe 24h 0.47 >More info 0.57 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
104 Tsu -Fe 24h Roots 0.47 >More info 0.57 >More info Tsu +Fe 24h Roots Original data GEO bulk
105 pmr5 0.49 >More info 0.55 >More info Col-0 Original data GEO bulk
106 WT seedlings MV 0.46 >More info 0.58 >More info WT seedlings control Seedlings Original data GEO bulk
107 CeO2 germinant -0.36 >More info -0.68 >More info Millipore Water germinant CeO2 seedling Original data
108 Phaseolicola 2 h (leaf) 0.57 >More info 0.46 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
109 CT101 ozone 0.66 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
110 chito-octamer 0.58 >More info 0.45 >More info Col Mock Original data GEO bulk
111 PBZ 0.58 >More info 0.45 >More info none PBZ Rosette Original data GEO bulk
112 ein2-1 9 hpi A. brassicicola 0.59 >More info 0.44 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
113 Botrytis cinerea 48h 0.53 >More info 0.50 >More info control 48h Original data GEO bulk
114 vte2-1 3d vernalization 0.69 >More info 0.34 >More info WT 3d vernalization Original data GEO bulk
115 WT +elf18 2h 0.63 >More info 0.39 >More info WT untreated elf18 Original data GEO bulk
116 WT 2-4h Xanthomonas 0.57 >More info 0.45 >More info WT T0 Original data GEO bulk
117 C24 ozone 0.59 >More info 0.43 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
118 WT-SA 0.54 >More info 0.48 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
119 coi1-16 ein2 sid2 ozone 0.65 >More info 0.37 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
120 C24-3h IAA 0.64 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
121 SCR-GR Time 12H Dex 0.81 >More info 0.20 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
122 WT NAA/flg 1h 0.64 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk
123 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.43 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
124 gun1gun5 far-red pretreated -0.50 >More info -0.51 >More info WT far-red pretreated Original data GEO bulk
125 WT roots - Fe 0.68 >More info 0.33 >More info WT roots + Fe Roots Original data GEO bulk
126 AFB1 flg22 2h 0.58 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
127 gai Control 0.67 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
128 C58 3hpi 0.50 >More info 0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
129 npr1-3 DCA 48h 0.40 >More info 0.60 >More info npr1-3 MOCK 48h Original data GEO bulk
130 Leafminer damaged seedlings 0.44 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
131 sta1 0.58 >More info 0.41 >More info WT Original data GEO bulk
132 smg7b-1 0.57 >More info 0.42 >More info WT whole plant Original data GEO bulk
133 hrpA 7h 0.54 >More info 0.45 >More info Mock 7h hrpA Original data GEO bulk
134 AFB1 flg22 1h 0.58 >More info 0.41 >More info WT 0h Leaf tissue Original data GEO bulk
135 WT Shoot Hypoxia 0.45 >More info 0.54 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
136 arf2 mock 0.57 >More info 0.41 >More info Col mock Original data GEO bulk
137 pepr1-1 Pepr2-3 +Pep2 10h -0.60 >More info -0.38 >More info WT +Pep2 10h Pep2 Original data GEO bulk
138 Mutant arf2 (etiol) 0.57 >More info 0.41 >More info Col (etiol) Original data GEO bulk
139 nia1nia2 0.65 >More info 0.33 >More info Col-0 whole seedlings Original data GEO bulk
140 24h volatiles Sm. R3089 -0.56 >More info -0.42 >More info 24h untreated whole seedling Original data GEO bulk
141 glk1 glk2 GLK1-GR +DEX 24h -0.58 >More info -0.40 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
142 Col whole leaf 3dpi 0.50 >More info 0.48 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
143 NAA 3h 0.67 >More info 0.30 >More info before treatment NAA root Original data GEO bulk
144 AvrRpm1 2 h (leaf) 0.62 >More info 0.35 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
145 Laer treat paclobutrazol (PAC) 0.61 >More info 0.36 >More info Laer Control leaf discs Original data GEO bulk
146 Salicylic Acid 3 h 0.41 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
147 rcf1-1 cold 24h 0.30 >More info 0.67 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
148 Cs shoot -0.37 >More info -0.60 >More info control shoot Original data GEO bulk
149 Col-0 2HS 0.41 >More info 0.56 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
150 npr1-1 SA -0.60 >More info -0.36 >More info Col-0 SA complete seedling Original data
151 4tga safener -0.59 >More info -0.37 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
152 pvip1 pvip2 0.58 >More info 0.38 >More info Col-0 whole rosettes Original data GEO bulk
153 ubc13A -Fe -0.55 >More info -0.41 >More info Col -Fe root Original data GEO bulk
154 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
155 2 hr Hypoxia Total RNA 0.44 >More info 0.52 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
156 Col BTH 0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
157 seedling -S Exp 0.41 >More info 0.55 >More info seedling FN Exp seedling Original data
158 Selenate (root) 0.55 >More info 0.40 >More info Ws (root) Original data GEO bulk
159 Root Selenate 0.55 >More info 0.40 >More info Root control 40 micromolar selenate Root Original data GEO bulk
160 SLWF infested 0.67 >More info 0.28 >More info SLWF uninfested rosette tissue Original data GEO bulk
161 Elevated CO2 AMPLE N NIGHT 0.59 >More info 0.36 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
162 ice1 3H Cold 0.52 >More info 0.43 >More info WT 3H Cold Original data GEO bulk
163 HSP90 Reduced RNAi-C1 0.64 >More info 0.31 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
164 ceh1 mutant 0.63 >More info 0.32 >More info Parent line Original data
165 UV Stress 24 h (shoot) 0.53 >More info 0.42 >More info Stress mock 24 h (shoot) Original data Stress treatments
166 ani1 T16 -0.58 >More info -0.37 >More info WT T16 root tissue Original data GEO bulk
167 35S:RPS4 eds1-2 8h -0.62 >More info -0.33 >More info 35S:RPS4 8h leaves Original data
168 Lipopolysaccaride4 h (leaf) 0.66 >More info 0.29 >More info Mock 4 h (leaf) Original data Elicitor treatments
169 Fei-0-1h IAA 0.67 >More info 0.27 >More info Fei-0-0h IAA whole plant Original data GEO bulk
170 WT flg22 1h 0.56 >More info 0.38 >More info WT 0h Leaf tissue Original data GEO bulk
171 Mutant iaa17-6 (IAA) 0.38 >More info 0.56 >More info Col (IAA) Original data GEO bulk
172 efr-1 +elf18 10h -0.60 >More info -0.34 >More info WT +elf18 10h elf18 Original data GEO bulk
173 Tsu -Fe 24h Shoots 0.69 >More info 0.25 >More info Tsu +Fe 24h Shoots Original data GEO bulk
174 t-zeatin 1 h -0.41 >More info -0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
175 det2 light-dark -0.42 >More info -0.52 >More info det2 light light-dark Original data GEO bulk
176 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
177 shoots bhlh100/101 0uM Fe 0.67 >More info 0.26 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
178 bak1-3 +Pep2 10h 0.55 >More info 0.38 >More info WT +Pep2 10h Pep2 Original data GEO bulk
179 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.40 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
180 Col upon hypoxia 6 hrs 0.40 >More info 0.53 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
181 Col-0 INA 48h 0.51 >More info 0.42 >More info Col-0 MOCK 48h Original data GEO bulk
182 gabaculin 0.50 >More info 0.43 >More info WT Col-0 seedling Original data GEO bulk
183 Fe starvation 72 h 0.32 >More info 0.61 >More info Control Original data GEO bulk
184 whole roots -Fe 72 hour 0.32 >More info 0.61 >More info whole roots standard Original data GEO bulk
185 oas-a1.1 Cd 18h 0.39 >More info 0.53 >More info Cd 18h root Root Original data GEO bulk
186 WT +Pep2 10h 0.57 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
187 Col whole leaf amplified 5 dpi 0.61 >More info 0.31 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
188 coi1-2 0.63 >More info 0.28 >More info Col-0 mock Whole seedling Original data GEO bulk
189 aba3-1 0.53 >More info 0.38 >More info wt Original data GEO bulk
190 UV 0.39 >More info 0.52 >More info WT aerial region Original data GEO bulk
191 Shoot -Cs 0.16 >More info 0.75 >More info Control-shoot Original data GEO bulk
192 rao2 H2O2 3h -0.50 >More info -0.41 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
193 WT flg22 2h 0.57 >More info 0.34 >More info WT 0h Leaf tissue Original data GEO bulk
194 Mature callus 0.41 >More info 0.50 >More info Young callus hypocotyls Original data GEO bulk
195 WT Bc inoculation 14h 0.51 >More info 0.39 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
196 eto1-4 + AVG -0.51 >More info -0.39 >More info eto1-4 whole seedling Original data GEO bulk
197 WT-NOCO2 INFECTED 0.50 >More info 0.40 >More info WT-MOCK Original data GEO bulk
198 INA 0.57 >More info 0.33 >More info CK INA seedling Original data
199 WT +elf18 10h 0.58 >More info 0.32 >More info WT untreated elf18 Original data GEO bulk
200 4d red light grown hmr-5 seedlings 0.58 >More info 0.32 >More info 4d red light grown WT(Col-0) seedlings Original data
201 WT NAA 1h 0.62 >More info 0.27 >More info WT 0h Leaf tissue Original data GEO bulk
202 rrd1 IBA -0.54 >More info -0.34 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
203 Col-0 under 4 days salt 0.56 >More info 0.31 >More info Col-0 under control 4 days salt treatment rosette Original data
204 Col-0 SA 0.52 >More info 0.35 >More info Col-0 water complete seedling Original data
205 low CO2 + light 0.52 >More info 0.35 >More info normal CO2 + light Original data GEO bulk
206 low water potential 0.64 >More info 0.23 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
207 seedling 12h after Gamma atm-1 0.66 >More info 0.20 >More info seedling day 1 unirradiated atm-1 12h Original data
208 Osmotic Stress 24 h (shoot) 0.50 >More info 0.36 >More info Stress mock 24 h (shoot) Original data Stress treatments
209 plant (tga2-5-6) 4h control -0.54 >More info -0.31 >More info plant (Col-0) 4h control Original data GEO bulk
210 toc1-1-65hr 0.53 >More info 0.32 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
211 Flagellin 4 h (leaf) 0.54 >More info 0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
212 Mutant tga2_5_6 -0.54 >More info -0.31 >More info Col-0 Original data GEO bulk
213 eto1-4 +370 -0.56 >More info -0.29 >More info eto1-4 whole seedling Original data GEO bulk
214 eds16 whole leaf 7d UI -0.31 >More info -0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
215 abh1 -ABA 0.34 >More info 0.51 >More info Col-0 -ABA Original data GEO bulk
216 SCR-GR Time 6H Dex 0.64 >More info 0.21 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
217 root longitudinal zone-3 pH 4.6 0.28 >More info 0.57 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
218 BLM+INA 0.51 >More info 0.33 >More info CK BLM and INA seedling Original data
219 tga2 tga5 tga6 ozone -0.57 >More info -0.27 >More info Col-0 ozone- (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
220 ein2-1 +Pep2 2h -0.52 >More info -0.31 >More info WT +Pep2 2h Pep2 Original data GEO bulk
221 IRP1-OE-Ctrl--root 0.68 >More info 0.15 >More info COL-0-Ctrl--root root Original data
222 atmyc2 cop1 Seedling BL 0.33 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
223 eto1-4 +303 -0.58 >More info -0.25 >More info eto1-4 whole seedling Original data GEO bulk
224 wrky33 Bc inoculation 14h 0.50 >More info 0.32 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
225 wavy 0.50 >More info 0.32 >More info WT Original data GEO bulk
226 Col whole leaf 6hpi 0.52 >More info 0.30 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
227 OXUPB1-2 elongation zone 0.50 >More info 0.32 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
228 ASL9-ox -0.60 >More info -0.22 >More info WT aerial parts of seedlings Original data GEO bulk
229 aerial organ callus inducing medium 12 h 0.50 >More info 0.31 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
230 ABA DFPM 0.53 >More info 0.28 >More info control Original data GEO bulk
231 tor mutant glucose 0.50 >More info 0.31 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
232 eto1-4 +393 -0.55 >More info -0.26 >More info eto1-4 whole seedling Original data GEO bulk
233 bbx24 in Simulated Shade -0.26 >More info -0.55 >More info WT in simulated shade shade seedling Original data
234 estradiole-induced ANAC092 -0.50 >More info -0.30 >More info transgenic (empty vector inducible system) Original data GEO bulk
235 root - 08% oxygen - 30min 0.27 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
236 shoot-10 μM DEX- 6 hr 0.60 >More info 0.19 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
237 ubc13A-es -0.50 >More info -0.29 >More info Col-es root Original data GEO bulk
238 plant (tga2-5-6) 4h OPDA 0.56 >More info 0.22 >More info plant (tga2-5-6) 4h control Original data GEO bulk
239 tunicamycin -0.56 >More info -0.22 >More info DMF Original data GEO bulk
240 Ws seedlings 0.72 >More info 0.06 >More info ged1 seedlings Original data GEO bulk
241 GST-overexpression seedlings control 0.56 >More info 0.22 >More info WT seedlings control Seedlings Original data
242 ged1 seedlings -0.72 >More info -0.06 >More info Ws seedlings Original data GEO bulk
243 ACC 3 h 0.22 >More info 0.56 >More info Mock 3 h Original data Basic hormone treatment of seedlings
244 35S-MIF1 dark grown 0.52 >More info 0.25 >More info Dark-grown WT control Original data GEO bulk
245 cop1 Seedling BL 0.26 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
246 root hypoxia pPEP 0.57 >More info 0.19 >More info root hypoxia total hypoxia root Original data GEO bulk
247 shoots WT 0uM Fe 0.54 >More info 0.22 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
248 TA induced 0.52 >More info 0.24 >More info Methanol TA Suspension cells Original data GEO bulk
249 WT Red light 1h 0.54 >More info 0.22 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
250 FarRed Light 4 h 0.20 >More info 0.56 >More info White Light 4 h Original data Light treatments
251 cop1 Seedling BL+ABA 0.15 >More info 0.61 >More info WT Seedling BL+ABA Original data GEO bulk
252 downy mildew cotyledons late stage 0.51 >More info 0.24 >More info mock inoculated Cotyledons Original data GEO bulk
253 SA Treated 0.67 >More info 0.08 >More info Water Original data GEO bulk
254 aerial organ callus inducing medium 24h 0.50 >More info 0.25 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
255 siliques AtHb1 control 0.23 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
256 spx1 spx2 complete 0.62 >More info 0.12 >More info WT complete seedlings Original data
257 Nuclear GSH1 0.57 >More info 0.17 >More info Cytoplasmic GSH1 Control Original data GEO bulk
258 root longitudinal zone-1 -Fe 0.19 >More info 0.55 >More info root longitudinal zone-1 standard Original data GEO bulk
259 aux1 mutant roots ethylene 0.11 >More info 0.63 >More info roots air Original data GEO bulk
260 plant (Col-0) 4h OPDA 0.56 >More info 0.17 >More info plant (Col-0) 4h control Original data GEO bulk
261 OPDA 4 h 0.56 >More info 0.17 >More info Col-0 Original data GEO bulk
262 root longitudinal zone-1 low sulfur -0.56 >More info -0.17 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
263 long 17-degree- 0.05 >More info 0.68 >More info control long Original data GEO bulk
264 tfl1-1-16ºC 0.51 >More info 0.22 >More info WT-16ºC Original data GEO bulk
265 SA 4mM 0.58 >More info 0.15 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
266 camta1/3 warm 0.50 >More info 0.22 >More info WT warm entire aerial part Original data GEO bulk
267 seedling 3h after Gamma WT 0.52 >More info 0.20 >More info seedling day 1 unirradiated WT 3h Original data
268 elf3-7-16ºC 0.21 >More info 0.51 >More info WT-16ºC Original data GEO bulk
269 seedling 6h after Gamma WT 0.55 >More info 0.16 >More info seedling day 1 unirradiated WT 6h Original data
270 seedling 6h after Gamma atm-1 0.51 >More info 0.20 >More info seedling day 1 unirradiated atm-1 6h Original data
271 Col-0 35S:MBS1 HL 3h -0.50 >More info -0.21 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
272 root longitudinal zone-2 -Fe 0.16 >More info 0.54 >More info root longitudinal zone-2 standard Original data GEO bulk
273 PsJN -0.52 >More info -0.18 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
274 aerial organ callus inducing medium 48 h 0.52 >More info 0.18 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
275 HSP90 Reduced Salk hsp90.1 -0.53 >More info -0.16 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
276 AFB1 0h 0.53 >More info 0.16 >More info WT 0h Leaf tissue Original data GEO bulk
277 Tsu-1 -Fe 48h 0.16 >More info 0.53 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
278 Tsu -Fe 48h Roots 0.16 >More info 0.53 >More info Tsu +Fe 24h Roots Original data GEO bulk
279 shoot-10 μM DEX- 3 hr 0.63 >More info 0.05 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
280 rcf1-1 cold 0h 0.53 >More info 0.15 >More info WT cold 0h Control seedlings Original data GEO bulk
281 Brassinolide 3 h (det2) -0.14 >More info -0.54 >More info Mock 3 h (det2) Original data Basic hormone treatment of seedlings
282 abi4-102 +lincomycin -0.59 >More info -0.09 >More info Col-0 +lincomycin Original data GEO bulk
283 8h-DC3000 avrRpm1 0.53 >More info 0.14 >More info 8h-DC3000 leaves Original data GEO bulk
284 FAMA induced 48h 0.55 >More info 0.11 >More info control 48h Whole seedling Original data GEO bulk
285 Drought Stress 24 h (shoot) 0.53 >More info 0.13 >More info Stress mock 24 h (shoot) Original data Stress treatments
286 root longitudinal zone-4 -Fe 0.16 >More info 0.50 >More info root longitudinal zone-4 standard Original data GEO bulk
287 Col in Pi deficiency medium 0.12 >More info 0.54 >More info Col in control medium root Original data GEO bulk
288 HairpinZ 4 h (leaf) 0.69 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
289 vte2-1 1d vernalization 0.58 >More info 0.08 >More info WT 1d vernalization Original data GEO bulk
290 MYB29 OE 0.14 >More info 0.51 >More info WT for MYB29/76 Original data GEO bulk
291 KAN1-GR 30min 0.55 >More info 0.09 >More info KAN1-GR 0min Original data GEO bulk
292 G3P 0.53 >More info 0.11 >More info Mock distal leaves Original data GEO bulk
293 HSP90 Reduced RNAi-B1 0.53 >More info 0.10 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
294 chl1-5 Nitrate 0.5h 0.13 >More info 0.50 >More info WT Nitrate 0.5h Original data GEO bulk
295 seedling 12h after Gamma WT 0.52 >More info 0.10 >More info seedling day 1 unirradiated WT 12h Original data
296 35S::CYC 0.54 >More info 0.08 >More info thaliana control secondary inflorescence Original data
297 21h-DC3000 avrRpm1 -0.61 >More info -0.01 >More info 21h-DC3000 leaves Original data GEO bulk
298 SHR-GR Time 1H Dex 0.54 >More info 0.07 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
299 Mutant ga1-5 -0.04 >More info -0.57 >More info Ler-1 Original data Comparison of plant hormone related mutant
300 Cocultivation 8 hrs leaf -0.08 >More info -0.53 >More info Mock cocultivation 8 hrs leaf Leaf Original data
301 Stem+10 mg/g NPA -0.53 >More info -0.07 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
302 csn4-1 mutant 0.06 >More info 0.54 >More info WT dark Original data GEO bulk
303 csn3-1 dark 0.07 >More info 0.53 >More info WT dark Original data GEO bulk
304 Col-0 35S:MBS1 HL 0h -0.51 >More info -0.08 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
305 Col-0 24hpi A. brassicicola 0.55 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
306 1h +Pi -0.56 >More info -0.01 >More info 1h -Pi root Original data GEO bulk
307 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
308 Polysomal RNA 35S:HF-RPL18 cold 0.07 >More info -0.64 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
309 bri1-116 -0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
310 stele pSHR 0h BL -0.50 >More info -0.06 >More info WR 35S 0h BL brassinosteroid root Original data
311 etr1 1% sucrose 12-day-old 0.56 >More info 0.00 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
312 scl3 0.55 >More info 0.01 >More info Col-0 whole root Original data GEO bulk
313 csn5 (csn5a-2 csn5b) dark 0.04 >More info 0.52 >More info WT dark Original data GEO bulk
314 2hr transitory KNO3 PrR cell 0.58 >More info -0.02 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
315 etiolated atbzip16 0.51 >More info 0.04 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
316 -Sulfate 2 h 0.50 >More info 0.04 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
317 gun5 norflurazon 0.51 >More info 0.01 >More info gun5 control Original data GEO bulk
318 F1 whole seedlings root 0.52 >More info 0.00 >More info Col whole seedlings root Seedlings Original data GEO bulk
319 DUO1 induced 12h -0.54 >More info 0.02 >More info 12hr-not-induced whole plant Original data GEO bulk
320 GO5; 0h switch to ambient CO2 concentrations; -0.56 >More info 0.05 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
321 root - 08% oxygen - 48h 0.01 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
322 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
323 LTN005-2 TSA -0.54 >More info 0.05 >More info LTN012-2 Mock Original data
324 Red/FR Light 4 h 0.05 >More info -0.52 >More info FarRed Light 4 h Original data Light treatments
325 roots bhlh100/101 100uM Fe 0.55 >More info -0.10 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
326 CsUBC13-OE -Fe 0.12 >More info -0.56 >More info Col -Fe root Original data GEO bulk
327 entire vegetative rosette -0.50 >More info 0.06 >More info Col-0 Mock WL entire vegetative rosette Original data
328 Drought Stress 24 h (root) 0.60 >More info -0.16 >More info Stress mock 24 h (root) Original data Stress treatments
329 Shoot apex inflorescence (after bolting) -0.22 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
330 Oxidative Stress 3 h (root) 0.10 >More info -0.51 >More info Stress mock 3 h (root) Original data Stress treatments
331 QC pSCR 3h BL 0.09 >More info -0.50 >More info QC pSCR 0h BL brassinosteroid root Original data
332 3x(m) -0.50 >More info 0.10 >More info 2x two week old seedlings Original data
333 P. infestans 6 h (leaf) 0.54 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
334 ein3 eil1 0.51 >More info -0.15 >More info Col-0 mock Whole seedling Original data GEO bulk
335 ein2 mutant roots mock -0.54 >More info 0.21 >More info roots mock Original data GEO bulk
336 IAA7mII over-expressor IAA Treated -0.42 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
337 A2hsfa1-ox in quadruple mutant -0.53 >More info 0.28 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
338 root - 04% oxygen - 30min -0.32 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
339 root - 01% oxygen - 30min -0.30 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
340 root - 04% oxygen - 2h -0.44 >More info 0.53 >More info root - 21% oxygen - 2h Original data GEO bulk