4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root stele 40 mM NaCls
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List of experiments correlated with "root stele 40 mM NaCls"  Help Download transcriptome of top 30
Score Experiment Correlation from
root stele 40 mM NaCls		 Correlation to
root stele 40 mM NaCls		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root stele 40 mM NaCls 1.00 >More info 1.00 >More info root stele Original data GEO bulk
2 root endodermis and quiescent center 40 mM NaCl 0.77 >More info 0.85 >More info root endodermis and quiescent center Original data GEO bulk
3 whole roots 140 mM NaCl 1 hour 0.79 >More info 0.82 >More info whole roots standard Original data GEO bulk
4 root columella root cap 40 mM NaCl 0.80 >More info 0.80 >More info root columella root cap Original data GEO bulk
5 whole roots 140 mM NaCl 30 minutes 0.75 >More info 0.80 >More info whole roots standard Original data GEO bulk
6 NaCl Col 0.69 >More info 0.80 >More info Col Original data GEO bulk
7 root protophloem 40 mM NaCl 0.76 >More info 0.73 >More info root protophloem Original data GEO bulk
8 root cells stele 140mM NaCl 1 hour 0.72 >More info 0.74 >More info root cells stele standard 1 hour root cells stele Original data
9 6h +Pi -0.76 >More info -0.68 >More info 6h -Pi root Original data GEO bulk
10 root longitudinal zone-3 NaCl 0.69 >More info 0.74 >More info root longitudinal zone-3 Original data GEO bulk
11 whole roots 140 mM NaCl 4 hour 0.68 >More info 0.72 >More info whole roots standard Original data GEO bulk
12 root epidermis and lateral root cap 40 mM NaCl 0.67 >More info 0.73 >More info root epidermis and lateral root cap Original data GEO bulk
13 SCR-GR Time 12H Dex 0.69 >More info 0.69 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
14 WT H2O2 3h 0.68 >More info 0.70 >More info WT water 3h 3h_H2O2 Original data GEO bulk
15 root longitudinal zone-4 NaCl 0.59 >More info 0.79 >More info root longitudinal zone-4 Original data GEO bulk
16 flu 0.65 >More info 0.71 >More info WT Col Original data GEO bulk
17 rosettes WT drought 0.71 >More info 0.65 >More info rosettes WT watered Original data GEO bulk
18 root protoplasts 40 mM NaCl 0.62 >More info 0.73 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
19 Salt Stress 24 h (root) 0.77 >More info 0.57 >More info Stress mock 24 h (root) Original data Stress treatments
20 flu over-tAPX 0.64 >More info 0.70 >More info WT Col Original data GEO bulk
21 root cortex 40 mM NaCl 0.63 >More info 0.70 >More info root cortex Original data GEO bulk
22 TNT-seedlings 0.50 >More info 0.82 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
23 Osmotic Stress 24 h (root) 0.73 >More info 0.58 >More info Stress mock 24 h (root) Original data Stress treatments
24 root cells stele 140mM NaCl 3 hours 0.62 >More info 0.68 >More info root cells stele standard 1 hour root cells stele Original data
25 low CO2 + light 0.58 >More info 0.72 >More info normal CO2 + light Original data GEO bulk
26 SCR-GR Time 1H Dex 0.60 >More info 0.70 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
27 WT AntimycinA 3h 0.68 >More info 0.61 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
28 AgNO3 3 h 0.59 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
29 ABA DFPM 0.71 >More info 0.57 >More info control Original data GEO bulk
30 SHR-GR Time 1H Dex 0.60 >More info 0.67 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
31 bak1-3 +Pep2 10h 0.69 >More info 0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
32 root cells cortex 140mM NaCl 1 hour 0.57 >More info 0.70 >More info root cells cortex standard 1 hour root cells cortex Original data
33 plant (tga2-5-6) 4h phytoprostane A1 0.56 >More info 0.71 >More info plant (tga2-5-6) 4h control Original data GEO bulk
34 Osmotic Stress 24 h (shoot) 0.67 >More info 0.59 >More info Stress mock 24 h (shoot) Original data Stress treatments
35 Col-0 flu HL 3h 0.68 >More info 0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
36 Col0-PsmES4326-24hpi 0.65 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
37 rosette Dark Wounded 0.52 >More info 0.72 >More info rosette Dark Control Original data GEO bulk
38 Col-0 under 4 days salt 0.66 >More info 0.58 >More info Col-0 under control 4 days salt treatment rosette Original data
39 Col-0 low oxygen 0.61 >More info 0.63 >More info Col-0 control low oxygen root Original data GEO bulk
40 8hr-pH4.5 0.71 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
41 Fenclorim 4hr 0.65 >More info 0.57 >More info Acetone 4hr root Original data GEO bulk
42 ABA 3 h 0.58 >More info 0.64 >More info Mock 3 h Original data Basic hormone treatment of seedlings
43 SA 4mM 0.52 >More info 0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 root longitudinal zone-2 NaCl 0.51 >More info 0.69 >More info root longitudinal zone-2 Original data GEO bulk
45 rosettes myoox drought 0.62 >More info 0.58 >More info rosettes myoox watered Original data GEO bulk
46 Phytoprostane A1 4 h 0.51 >More info 0.68 >More info Col-0 Original data GEO bulk
47 Cocultivation 8 hrs root 0.62 >More info 0.57 >More info Mock cocultivation 8 hrs root Root Original data
48 CMP 4hr 0.64 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
49 inhibitor A Treated 0.54 >More info 0.64 >More info Negative Control Original data GEO bulk
50 ced1 -0.59 >More info -0.59 >More info WT PEG 6hr seedlings Original data GEO bulk
51 5-Triiodobenzoic acid3 h 0.46 >More info 0.72 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
52 dicamba 0.67 >More info 0.50 >More info WT mock whole seedling Original data GEO bulk
53 root Dosed gold 0.68 >More info 0.48 >More info root No gold .125 mM gold 24 h roots Original data
54 Seedling-HeatStressed POLYSOMESmRNA 0.56 >More info 0.60 >More info Seedling-control POLYSOMESmRNA seedling Original data
55 0.125 mM gold 24 h 0.68 >More info 0.48 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
56 CMP 24hr 0.67 >More info 0.49 >More info Acetone 24hr root Original data GEO bulk
57 WT seedlings MV 0.49 >More info 0.67 >More info WT seedlings control Seedlings Original data GEO bulk
58 WT 30μM arsenate 8 hours. 0.58 >More info 0.58 >More info WT control (not supplemented). Original data
59 C2 leaf-drought 0.57 >More info 0.58 >More info C2 leaf-well watered Original data GEO bulk
60 Col-O high light 0.60 >More info 0.55 >More info Col-O bule light Original data GEO bulk
61 Anoxia 0.55 >More info 0.60 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
62 NJ15 0.41 >More info 0.74 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
63 dor drought 0.47 >More info 0.67 >More info WT drought Original data GEO bulk
64 WT 3H Cold 0.42 >More info 0.72 >More info WT control Original data GEO bulk
65 Roots Cd -0.55 >More info -0.58 >More info Roots control Cd Root Original data GEO bulk
66 HopZ1a treated ulp1c ulp1d 0.61 >More info 0.52 >More info col Original data GEO bulk
67 col-5 DC3000 12h 0.57 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
68 Col-0 drought 0.64 >More info 0.49 >More info Col-0 control Original data GEO bulk
69 9 hr Hypoxia 1 hr recovery Total RNA 0.51 >More info 0.61 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
70 ABA 1 h 0.47 >More info 0.65 >More info Mock 1 h Original data Basic hormone treatment of seedlings
71 rosette Light Wounded 0.48 >More info 0.64 >More info rosette Light Control Original data GEO bulk
72 low CO2 + dark 0.49 >More info 0.63 >More info normal CO2 + light Original data GEO bulk
73 WT 24H Cold 0.51 >More info 0.60 >More info WT control Original data GEO bulk
74 DFPM 0.62 >More info 0.49 >More info control Original data GEO bulk
75 SHR-GR Time 12H Dex -0.49 >More info -0.62 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
76 aox1a:rpoTmp MLD stressed -0.54 >More info -0.56 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
77 oligomycin 4 h 0.65 >More info 0.45 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
78 ABA SA 3h 0.50 >More info 0.60 >More info EtOH 3h 3hr Original data GEO bulk
79 Seedling-HeatStressed TOTALmRNA 0.51 >More info 0.59 >More info Seedling-control TOTALmRNA seedling Original data
80 dorn1-1 Root 100 mM ATP 30 min -0.44 >More info -0.66 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
81 WT 6H Cold 0.42 >More info 0.67 >More info WT control Original data GEO bulk
82 IAA/inhibitor A Treated 0.52 >More info 0.57 >More info IAA Treated Original data GEO bulk
83 whole roots 140 mM NaCl 16 hour 0.61 >More info 0.48 >More info whole roots standard Original data GEO bulk
84 WT+H2O2 0.39 >More info 0.70 >More info WT H2O2 Original data GEO bulk
85 HSP90 Reduced RNAi-A2 0.49 >More info 0.60 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
86 cat2-2; 8h switch to ambient CO2 concentrations; 0.47 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
87 Col-0 2HS 0.52 >More info 0.56 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
88 rosettes drought 0.56 >More info 0.52 >More info rosettes watered Original data GEO bulk
89 Heat and anoxia 0.54 >More info 0.54 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
90 9 hr Hypoxia Total RNA 0.52 >More info 0.56 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
91 Cold Stress 24 h (root) 0.53 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
92 Cor 10h 0.51 >More info 0.57 >More info Mock 10h Cor Original data GEO bulk
93 ABA JA 3h 0.46 >More info 0.62 >More info EtOH 3h 3hr Original data GEO bulk
94 Seedling KUA1-IOX est 0.49 >More info 0.59 >More info Seedling KUA1-IOX mock Original data
95 roottip hypoxia total 0.51 >More info 0.56 >More info roottip control total Original data GEO bulk
96 Leafminer damaged seedlings 0.50 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
97 2 hr Hypoxia Total RNA 0.55 >More info 0.51 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
98 anac017-2 AntimycinA 3h -0.56 >More info -0.50 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
99 gai Control 0.53 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
100 IMI 4mM 0.57 >More info 0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
101 21h-DC3000 avrRpm1 -0.47 >More info -0.59 >More info 21h-DC3000 leaves Original data GEO bulk
102 root longitudinal zone-1 NaCl 0.37 >More info 0.69 >More info root longitudinal zone-1 Original data GEO bulk
103 WT leaf-drought 0.54 >More info 0.51 >More info WT leaf-well watered Original data GEO bulk
104 9 hr Hypoxia IP RNA 0.51 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
105 rosettes atx drought 0.61 >More info 0.44 >More info rosettes atx watered Original data GEO bulk
106 HopZ1a treated 0.57 >More info 0.48 >More info col Original data GEO bulk
107 WT (Col-0) inflorescence drought day 5 0.53 >More info 0.51 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
108 K starvation (root) 0.53 >More info 0.51 >More info Ws (root) Original data GEO bulk
109 SCR-GR Time 3H Dex 0.55 >More info 0.49 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
110 root cells stele -Fe 0.44 >More info 0.60 >More info whole roots standard Original data GEO bulk
111 Protoplast Induced 0.40 >More info 0.64 >More info Uninduced Original data GEO bulk
112 inhibitor B Treated 0.35 >More info 0.69 >More info Negative Control Original data GEO bulk
113 8h-DC3000 avrRpm1 0.46 >More info 0.58 >More info 8h-DC3000 leaves Original data GEO bulk
114 root cells epidermis 140mM NaCl 1 hour 0.42 >More info 0.62 >More info root cells epidermis standard 1 hour root cells epidermis Original data
115 plant (tga2-5-6) 4h OPDA 0.52 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
116 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.45 >More info WT +Pep2 2h Pep2 Original data GEO bulk
117 HSP90 Reduced RNAi-B1 0.50 >More info 0.53 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
118 Root -K 0.53 >More info 0.50 >More info Control-root Original data GEO bulk
119 6 h SL Attim 17-1 1 -0.61 >More info -0.42 >More info 0 h Attim 17-1 1 seed Original data
120 tfl1-1-16ºC 0.43 >More info 0.60 >More info WT-16ºC Original data GEO bulk
121 4h decapitation -0.48 >More info -0.55 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
122 Nicotinamide-53hr 0.49 >More info 0.54 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
123 ABA JA 24h 0.37 >More info 0.66 >More info EtOH 24h 24hr Original data GEO bulk
124 Salt Stress 24 h (shoot) 0.51 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
125 safener treated 0.52 >More info 0.50 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
126 root cells stele 140mM NaCl 8 hours 0.45 >More info 0.57 >More info root cells stele standard 1 hour root cells stele Original data
127 coi1-2 0.58 >More info 0.43 >More info Col-0 mock Whole seedling Original data GEO bulk
128 Laer pretreat GA Flg22 1h 0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
129 gun1gun5 far-red pretreated -0.37 >More info -0.64 >More info WT far-red pretreated Original data GEO bulk
130 6 h SL WT -0.63 >More info -0.37 >More info 0 h WT seed Original data
131 Fenclorim 24hr 0.58 >More info 0.42 >More info Acetone 24hr root Original data GEO bulk
132 low water potential 0.52 >More info 0.48 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
133 root cells stele 140mM NaCl 32 hours 0.42 >More info 0.58 >More info root cells stele standard 1 hour root cells stele Original data
134 pepr1-1 Pepr2-3 +Pep2 10h -0.56 >More info -0.43 >More info WT +Pep2 10h Pep2 Original data GEO bulk
135 ulp1c ulp1d +Pto 0.50 >More info 0.49 >More info ulp1c ulp1d mock Original data GEO bulk
136 oligomycin 1 h 0.50 >More info 0.49 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
137 rdr6-15 -0.59 >More info -0.40 >More info Col-0 Original data GEO bulk
138 Col-Luc WT 3h antimycin A 0.51 >More info 0.48 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
139 Nicotinamide-57hr 0.54 >More info 0.45 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
140 ARR22-ox (t-zeatin 3 h) 0.54 >More info 0.45 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
141 21h-DC3000 hrpA -0.43 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
142 Shoot -Cs 0.33 >More info 0.66 >More info Control-shoot Original data GEO bulk
143 9 hr Hypoxia 1 hr recovery IP RNA 0.43 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
144 Leafminer locally damaged thaliana seedlings 0.50 >More info 0.48 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
145 Pst-DC3000(avrRpm1)-4hpi 0.50 >More info 0.48 >More info Pst-DC3000-4hpi Original data GEO bulk
146 Pto inoculated 0.56 >More info 0.42 >More info col Original data GEO bulk
147 JA 0.51 >More info 0.47 >More info Col-0 mock Whole seedling Original data GEO bulk
148 4d red light grown hmr-5 seedlings 0.59 >More info 0.39 >More info 4d red light grown WT(Col-0) seedlings Original data
149 oas-a1.1 Cd 18h 0.39 >More info 0.59 >More info Cd 18h root Root Original data GEO bulk
150 24h +Pi -0.45 >More info -0.53 >More info 24h -Pi root Original data GEO bulk
151 DC3000 7h 0.43 >More info 0.55 >More info Mock 7h DC3000 Original data GEO bulk
152 48 h S Attim 17-1 1 -0.55 >More info -0.42 >More info 0 h Attim 17-1 1 seed Original data
153 WT (Col-0) inflorescence drought day 10 0.57 >More info 0.40 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
154 Col-0 9 hpi A. brassicicola 0.50 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
155 WT flg22 2h 0.50 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
156 cell culture 4 h phytoprostane A1 0.44 >More info 0.53 >More info cell culture 4 h control Original data GEO bulk
157 IAA/inhibitor B Treated 0.32 >More info 0.65 >More info IAA Treated Original data GEO bulk
158 stn7-1 -0.45 >More info -0.52 >More info Col-0 rosette leaves Original data GEO bulk
159 ABA 24h 0.46 >More info 0.51 >More info EtOH 24h 24hr Original data GEO bulk
160 root stele -S -0.39 >More info -0.58 >More info root stele pH5.7 Original data GEO bulk
161 RRE2 Chitin 0.57 >More info 0.39 >More info Chitin Original data GEO bulk
162 root cells columella root cap -Fe 0.52 >More info 0.44 >More info whole roots standard Original data GEO bulk
163 Red/FR Light45min 0.23 >More info 0.73 >More info FarRed Light 45min Original data Light treatments
164 Mutant gh3.5-1D (AvrRpt2) 0.46 >More info 0.50 >More info Col-0 (AvrRpt2) Original data GEO bulk
165 plant (Col-0) 4h phytoprostane A1 0.43 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
166 rosette leaves fdh 0.43 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
167 TA induced 0.39 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
168 P.p 6hai 0.56 >More info 0.39 >More info At-Control roots Original data GEO bulk
169 Col ozone 3h 0.40 >More info 0.55 >More info Col clean-air 3h ozone Original data GEO bulk
170 WT Shoot-Pi 0.53 >More info 0.42 >More info WT Shoot+Pi shoots Original data GEO bulk
171 root callus inducing medium 96 h -0.51 >More info -0.44 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
172 6-trichlorophenoxyacetic acid 3 h 0.23 >More info 0.72 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
173 Col in Pi deficiency medium 0.36 >More info 0.59 >More info Col in control medium root Original data GEO bulk
174 gpa1 -ABA GC -0.32 >More info -0.63 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
175 ABA SA 24h 0.32 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
176 sfr6 drought -0.36 >More info -0.59 >More info WT drought All aerial tissue Original data GEO bulk
177 WT (Col) glucose -0.38 >More info -0.56 >More info WT (Col) glucose seedlings Original data GEO bulk
178 npr1-1 SA -0.57 >More info -0.37 >More info Col-0 SA complete seedling Original data
179 35S:RPS4 eds1-2 24h -0.52 >More info -0.42 >More info 35S:RPS4 24h leaves Original data
180 cat2-short-day 2d 0.33 >More info 0.61 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
181 35S:VND7-VP16-GR+DEX +CHX 0.27 >More info 0.66 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
182 rcf1-1 cold 24h 0.52 >More info 0.41 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
183 Dark 40 min pls UV-A 5 min 0.50 >More info 0.43 >More info Dark 45 min Original data Light treatments
184 WT-Dry 0.34 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
185 T8 leaf-drought 0.39 >More info 0.53 >More info T8 leaf-well watered Original data GEO bulk
186 Leaf wounded 0.28 >More info 0.64 >More info Leaf control vegetative leaf Original data GEO bulk
187 (Ws-2)+100 uM As 0.50 >More info 0.42 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
188 anac017-2 H2O2 3h -0.50 >More info -0.42 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
189 35S::MBF1c 0.29 >More info 0.63 >More info control Original data GEO bulk
190 35S::PI ap3-3 35S::AP-GR +DEX 0.18 >More info 0.74 >More info 0hr DEX Original data GEO bulk
191 48 h S WT -0.54 >More info -0.37 >More info 0 h WT seed Original data
192 siliques AtHb1 control 0.39 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
193 WT drought 0.39 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
194 GST NPP1 4 h (leaf) 0.50 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
195 des1 water 0.50 >More info 0.41 >More info WT water water leaf Original data GEO bulk
196 penta Alternaria 3dpi 0.58 >More info 0.33 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
197 Mutant axr3-1 (IAA) 0.31 >More info 0.60 >More info Col (IAA) Original data GEO bulk
198 P.p 30hai 0.56 >More info 0.34 >More info At-Control roots Original data GEO bulk
199 gh3.5-1D 48 hpi 0.54 >More info 0.36 >More info Col-0 uninoculated Original data GEO bulk
200 T6 leaf-drought 0.37 >More info 0.53 >More info T6 leaf-well watered Original data GEO bulk
201 RRE1 Chitin 0.56 >More info 0.33 >More info Chitin Original data GEO bulk
202 Dark 3day ivd 0.52 >More info 0.37 >More info 0h ivd Original data
203 whole roots 140 mM NaCl 32 hour 0.61 >More info 0.28 >More info whole roots standard Original data GEO bulk
204 phyABCDE 4-day dark- 2 hours Rc50 0.37 >More info 0.52 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
205 pil5 red light 0.56 >More info 0.32 >More info Col-0 red light Original data GEO bulk
206 efr-1 +elf18 10h -0.54 >More info -0.34 >More info WT +elf18 10h elf18 Original data GEO bulk
207 gul2-1 mutant 0.52 >More info 0.35 >More info WT 7 day-old whole seedlings Original data
208 toc1-1-53hr 0.26 >More info 0.61 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
209 WT 30μM phosphate 8 hours. -0.35 >More info -0.52 >More info WT control (not supplemented). Original data
210 35S:RPS4 eds1-2 8h -0.52 >More info -0.34 >More info 35S:RPS4 8h leaves Original data
211 Ws HS 0.30 >More info 0.56 >More info Ws control heat shocked seedling Original data GEO bulk
212 root longitudinal zone-1 low sulfur -0.31 >More info -0.55 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
213 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.50 >More info 0.36 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
214 24h SL WT -0.60 >More info -0.26 >More info 0 h WT seed Original data
215 Laer pretreat JA Flg22 0h 0.28 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
216 root cells endodermis 140mM NaCl 1 hour 0.36 >More info 0.50 >More info root cells endodermis standard 1 hour root cells endodermis Original data
217 root epidermis and lateral root cap -S -0.29 >More info -0.57 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
218 Heat shock optimum 0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
219 Col-0 0h NAA 0.33 >More info 0.52 >More info Col-0 6h MOCK Original data GEO bulk
220 Col BTH 0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
221 24h SL Attim 17-1 1 -0.58 >More info -0.27 >More info 0 h Attim 17-1 1 seed Original data
222 Col-0 ozone 0.50 >More info 0.35 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
223 Homozygous-AtcesA4 0.50 >More info 0.35 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
224 AFB1 0h 0.52 >More info 0.32 >More info Col 0h Leaf Original data GEO bulk
225 cov1 cov2 stem Base 0.52 >More info 0.32 >More info WT stem Base stem Base Original data GEO bulk
226 WT in -N 0.52 >More info 0.32 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
227 Col-0 HS 0.30 >More info 0.54 >More info Col-0 control heat shocked seedling Original data GEO bulk
228 myb3 myb3r4d 0.31 >More info 0.53 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
229 WT (Col-0) heat shock 0.30 >More info 0.54 >More info WT (Col-0) whole seedling Original data GEO bulk
230 Elevated CO2 expanding leaf 0.32 >More info 0.52 >More info Ambient CO2 expanding leaf expanding leaf Original data
231 8-DAC chr11-1chr17-1 0.54 >More info 0.29 >More info 8-DAC Col-0 leaf explants Original data
232 Homozygous-AtcesA6 0.33 >More info 0.50 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
233 8h-DC3000 hrpA 0.24 >More info 0.59 >More info 8h-DC3000 leaves Original data GEO bulk
234 vte2 leaves 0h LT -0.25 >More info -0.58 >More info Col leaves 0h LT h 9-11th adult leaves Original data
235 Phaseolicola 2 h (leaf) 0.50 >More info 0.32 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
236 rosette leaves lcr 0.27 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
237 SHR-GR Time 6H Dex -0.32 >More info -0.50 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
238 3x(p) 0.31 >More info 0.51 >More info 2x two week old seedlings Original data
239 WT 1wk -P 0.50 >More info 0.31 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
240 2hr continuous KNO3 PeR cell -0.13 >More info -0.68 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
241 Col-0 (t-zeatin 3 h) -0.23 >More info -0.58 >More info Col-0 Original data Cytokinin treatment of seedlings
242 GO5; 8h switch to ambient CO2 concentrations; 0.24 >More info 0.56 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
243 root longitudinal zone-1 pH 4.6 0.50 >More info 0.29 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
244 til1-1 22C 0.28 >More info 0.50 >More info Col-0 22C Original data GEO bulk
245 Light 0.5h steady-state 0.19 >More info 0.59 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
246 root cells stele 140mM NaCl 48 hours 0.25 >More info 0.53 >More info root cells stele standard 1 hour root cells stele Original data
247 Col 8h 0.25 >More info 0.53 >More info Col CA Leaves Original data
248 Hydrogen Peroxide 500 uM 0.21 >More info 0.57 >More info Control RB and PER Hydrogen Peroxide Original data
249 cpr5scv1 0.53 >More info 0.24 >More info WT(COL) Original data GEO bulk
250 Selenate (root) 0.22 >More info 0.55 >More info Ws (root) Original data GEO bulk
251 Root Selenate 0.22 >More info 0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
252 Methyl Jasmonate 0.5 h 0.26 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
253 Mutant iaa5_6_19(IAA) 0.25 >More info 0.51 >More info Col (IAA) Original data GEO bulk
254 Ws leaf 100mM NaCl 0.26 >More info 0.50 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
255 Ws 100mM NaCl 0.26 >More info 0.50 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
256 ptpks2 -0.25 >More info -0.50 >More info Col-WT leaves Original data GEO bulk
257 Chemically 0.05 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
258 root longitudinal zone-4 low sulfur -0.50 >More info -0.23 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
259 M6PR transgenic leaf 100mM NaCl -0.09 >More info -0.63 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
260 cat2-short-day 4d 0.19 >More info 0.53 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
261 Mutant axr3-1 0.19 >More info 0.52 >More info Col Original data GEO bulk
262 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
263 Full C2 T3 -0.21 >More info -0.50 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
264 FarRed Light 45min -0.02 >More info -0.68 >More info White Light 45min Original data Light treatments
265 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.15 >More info 0.55 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
266 desiccated mature pollen grains -0.15 >More info -0.55 >More info hydrated pollen grains Original data GEO bulk
267 vte2-1 1d vernalization 0.20 >More info 0.50 >More info WT 1d vernalization Original data GEO bulk
268 OsSAP11 expressing -0.19 >More info -0.50 >More info WT seedlings Original data GEO bulk
269 cpctry 0.16 >More info 0.52 >More info Col Original data GEO bulk
270 35S:VND7-VP16-GR+CHX 0.07 >More info 0.61 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
271 JA 3h 0.18 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
272 PsJN -0.11 >More info -0.57 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
273 Ibuprofen 3 h 0.06 >More info 0.60 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
274 triploid female excess -0.06 >More info -0.60 >More info tetraploid Original data GEO bulk
275 Light 0.5h polysome-bound 0.10 >More info 0.55 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
276 CeO2 germinant -0.05 >More info -0.59 >More info Millipore Water germinant CeO2 seedling Original data
277 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
278 WT seedlings IAA 0.13 >More info 0.50 >More info WT seedlings control Seedlings Original data GEO bulk
279 downy mildew cotyledons late stage 0.58 >More info 0.04 >More info mock inoculated Cotyledons Original data GEO bulk
280 QC pSCR 3h BL 0.04 >More info 0.56 >More info QC pSCR 0h BL brassinosteroid root Original data
281 penta MeJA 1h 0.50 >More info 0.07 >More info Laer MeJA 1h leaf discs Original data GEO bulk
282 vte2 leaves 120h LT 0.51 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
283 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
284 opr3 JA 0.5 h -0.04 >More info 0.56 >More info opr3 0 h Original data GEO bulk
285 shoots bhlh100/101 100uM Fe 0.01 >More info -0.51 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
286 Col PSTDC3000 24h 0.57 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
287 elf3-7-23ºC -0.20 >More info 0.59 >More info WT-23ºC Original data GEO bulk
288 ABA 0.59 >More info -0.22 >More info control Original data GEO bulk
289 seed germinating in countinuous light 24h SL -0.32 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
290 Shoot apex inflorescence (after bolting) -0.48 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages