4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Anoxia
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List of experiments correlated with "Anoxia"  Help Download transcriptome of top 30
Score Experiment Correlation from
Anoxia		 Correlation to
Anoxia		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Anoxia 1.00 >More info 1.00 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
2 Heat and anoxia 0.83 >More info 0.85 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
3 Heat 0.77 >More info 0.80 >More info Control 90 minutes at 38°C. Original data GEO bulk
4 Col-0 HS 0.70 >More info 0.85 >More info Col-0 control heat shocked seedling Original data GEO bulk
5 WT (Col-0) heat shock 0.70 >More info 0.85 >More info WT (Col-0) whole seedling Original data GEO bulk
6 Col-0 low oxygen 0.80 >More info 0.74 >More info Col-0 control low oxygen root Original data GEO bulk
7 Col-0 37C 0.74 >More info 0.80 >More info Col-0 22C Original data GEO bulk
8 roottip hypoxia total 0.75 >More info 0.78 >More info roottip control total Original data GEO bulk
9 9 hr Hypoxia Total RNA 0.77 >More info 0.75 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
10 Seedling-HeatStressed TOTALmRNA 0.72 >More info 0.80 >More info Seedling-control TOTALmRNA seedling Original data
11 Ws HS 0.68 >More info 0.83 >More info Ws control heat shocked seedling Original data GEO bulk
12 2 hr Hypoxia Total RNA 0.73 >More info 0.78 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
13 9 hr Hypoxia IP RNA 0.79 >More info 0.71 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
14 Seedling-HeatStressed POLYSOMESmRNA 0.70 >More info 0.80 >More info Seedling-control POLYSOMESmRNA seedling Original data
15 9 hr Hypoxia 1 hr recovery Total RNA 0.75 >More info 0.74 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
16 Col-0 2HS 0.72 >More info 0.76 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
17 root hypoxia total 0.77 >More info 0.71 >More info root control total Original data GEO bulk
18 inhibitor B Treated 0.69 >More info 0.78 >More info Negative Control Original data GEO bulk
19 WT Shoot Hypoxia 0.70 >More info 0.74 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
20 plant (tga2-5-6) 4h phytoprostane A1 0.68 >More info 0.75 >More info plant (tga2-5-6) 4h control Original data GEO bulk
21 WT seedlings MV 0.74 >More info 0.68 >More info WT seedlings control Seedlings Original data GEO bulk
22 NJ15 0.59 >More info 0.83 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
23 WT 30μM arsenate 8 hours. 0.75 >More info 0.67 >More info WT control (not supplemented). Original data
24 9 hr Hypoxia 1 hr recovery IP RNA 0.76 >More info 0.66 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
25 dark-hs 0.64 >More info 0.77 >More info dark-control seedling Original data
26 inhibitor A Treated 0.69 >More info 0.72 >More info Negative Control Original data GEO bulk
27 IAA/inhibitor B Treated 0.64 >More info 0.75 >More info IAA Treated Original data GEO bulk
28 WT Root Hypoxia 0.65 >More info 0.73 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
29 5-Triiodobenzoic acid3 h 0.63 >More info 0.74 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
30 Phytoprostane A1 4 h 0.67 >More info 0.69 >More info Col-0 Original data GEO bulk
31 2 hr Hypoxia IP RNA 0.76 >More info 0.59 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
32 IAA/inhibitor A Treated 0.70 >More info 0.63 >More info IAA Treated Original data GEO bulk
33 flu 0.68 >More info 0.62 >More info WT Col Original data GEO bulk
34 Col-0 wt Hypoxic 0.59 >More info 0.71 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
35 MPK6 ox Shoot Hypoxia 0.72 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
36 plant (Col-0) 4h OPDA 0.67 >More info 0.60 >More info plant (Col-0) 4h control Original data GEO bulk
37 OPDA 4 h 0.67 >More info 0.60 >More info Col-0 Original data GEO bulk
38 Cocultivation 8 hrs root 0.69 >More info 0.58 >More info Mock cocultivation 8 hrs root Root Original data
39 TNT-seedlings 0.44 >More info 0.82 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
40 oligomycin 1 h 0.54 >More info 0.70 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
41 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.73 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
42 plant (tga2-5-6) 4h OPDA 0.67 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
43 Heat shock 20%Inhibition 0.65 >More info 0.58 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
44 shoot hypoxia total 0.54 >More info 0.68 >More info shoot control total Original data GEO bulk
45 SA 0.65 >More info 0.57 >More info WT mock Whole seedling Original data GEO bulk
46 flu over-tAPX 0.65 >More info 0.57 >More info WT Col Original data GEO bulk
47 WT+H2O2 0.60 >More info 0.61 >More info WT H2O2 Original data GEO bulk
48 Col-O high light 0.64 >More info 0.57 >More info Col-O bule light Original data GEO bulk
49 Osmotic Stress 24 h (root) 0.69 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
50 dicamba 0.64 >More info 0.56 >More info WT mock whole seedling Original data GEO bulk
51 WT H2O2 3h 0.61 >More info 0.57 >More info WT water 3h 3h_H2O2 Original data GEO bulk
52 Col-Luc WT 3h antimycin A 0.57 >More info 0.61 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
53 WT heat shock 0.58 >More info 0.59 >More info WT untreated above-ground parts Original data GEO bulk
54 CMP 4hr 0.64 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
55 QK HS 0.56 >More info 0.60 >More info QK control heat shocked seedling Original data GEO bulk
56 light-hs 0.52 >More info 0.64 >More info light-control seedling Original data
57 Light 0.5h steady-state 0.42 >More info 0.74 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
58 root stele 40 mM NaCls 0.60 >More info 0.55 >More info root stele Original data GEO bulk
59 gai Control 0.71 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
60 WT AntimycinA 3h 0.60 >More info 0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
61 Salt Stress 24 h (root) 0.71 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
62 Rose Bengal 0.5 uM 0.46 >More info 0.69 >More info Control RB and PER Rose Bengal Original data
63 Col-0 low oxygen 0.77 >More info 0.37 >More info Col-0 Original data GEO bulk
64 (Col-0)+200 uM As 0.64 >More info 0.50 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
65 Col0-PsmES4326-24hpi 0.53 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
66 21h-DC3000 hrpA -0.50 >More info -0.64 >More info 21h-DC3000 leaves Original data GEO bulk
67 oligomycin 4 h 0.63 >More info 0.50 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
68 anac017-2 water 3h 0.50 >More info 0.63 >More info WT water 3h 3h_water Original data GEO bulk
69 cell culture 4 h phytoprostane A1 0.61 >More info 0.52 >More info cell culture 4 h control Original data GEO bulk
70 HS 0.55 >More info 0.58 >More info noneHS Original data GEO bulk
71 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.69 >More info -0.43 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
72 anac017-2 AntimycinA 3h -0.66 >More info -0.45 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
73 rcf1-1 cold 24h 0.51 >More info 0.60 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
74 FHY3p dark+DEX -0.63 >More info -0.48 >More info FHY3p dark+mock Original data GEO bulk
75 plant (Col-0) 4h phytoprostane A1 0.52 >More info 0.59 >More info plant (tga2-5-6) 4h control Original data GEO bulk
76 ein3 eil1 0.61 >More info 0.49 >More info Col-0 mock Whole seedling Original data GEO bulk
77 cop1 Seedling BL 0.58 >More info 0.52 >More info WT Seedling BL Original data GEO bulk
78 6h +Pi -0.56 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
79 CMP 24hr 0.63 >More info 0.46 >More info Acetone 24hr root Original data GEO bulk
80 atmyc2 cop1 Seedling BL 0.54 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
81 Dark 40 min pls UV-A 5 min 0.47 >More info 0.61 >More info Dark 45 min Original data Light treatments
82 root protoplasts 40 mM NaCl 0.59 >More info 0.48 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
83 24h SL WT -0.57 >More info -0.50 >More info 0 h WT seed Original data
84 Col light-dark EtOH 0.72 >More info 0.35 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
85 1h +Pi -0.59 >More info -0.48 >More info 1h -Pi root Original data GEO bulk
86 Col-0 flu HL 3h 0.64 >More info 0.42 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
87 MPK6 ox Root Hypoxia 0.65 >More info 0.41 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
88 IMI 4mM 0.74 >More info 0.32 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
89 FarRed Light 45min -0.26 >More info -0.80 >More info White Light 45min Original data Light treatments
90 whole roots 140 mM NaCl 1 hour 0.47 >More info 0.59 >More info whole roots standard Original data GEO bulk
91 rosettes WT drought 0.51 >More info 0.54 >More info rosettes WT watered Original data GEO bulk
92 gun1gun5 far-red pretreated -0.60 >More info -0.45 >More info WT far-red pretreated Original data GEO bulk
93 Heat shock optimum 0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
94 Light 0.5h polysome-bound 0.31 >More info 0.74 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
95 PNO8 12 h 0.69 >More info 0.36 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
96 15m.KCl 0.57 >More info 0.48 >More info To. KCl 14 day old Roots Original data GEO bulk
97 shoot-10 μM DEX- 6 hr 0.55 >More info 0.49 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
98 1 h Light Total RNA -0.52 >More info -0.52 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
99 cat2-short-day 2d 0.53 >More info 0.51 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
100 root - 01% oxygen - 2h 0.34 >More info 0.70 >More info root - 21% oxygen - 2h Original data GEO bulk
101 Protoplast Induced 0.44 >More info 0.60 >More info Uninduced Original data GEO bulk
102 Seedling KUA1-IOX est 0.40 >More info 0.64 >More info Seedling KUA1-IOX mock Original data
103 Col upon hypoxia 6 hrs 0.71 >More info 0.32 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
104 hira-root -0.57 >More info -0.46 >More info WT-root root Original data
105 24h SL Attim 17-1 1 -0.55 >More info -0.48 >More info 0 h Attim 17-1 1 seed Original data
106 Heat shock 30%Inhibition 0.57 >More info 0.46 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
107 shoot-10 μM DEX- 12 hr 0.44 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
108 sicy-192 gun1-101 cotyledons 0.62 >More info 0.40 >More info WT cotyledons cotyledons Original data
109 toc1-1-85hr 0.30 >More info 0.72 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
110 dsr1 SA Treated 0.58 >More info 0.43 >More info SA Whole seedling Original data GEO bulk
111 Col-0 0h NAA 0.52 >More info 0.49 >More info Col-0 6h MOCK Original data GEO bulk
112 6 h SL WT -0.52 >More info -0.49 >More info 0 h WT seed Original data
113 RRE1 Chitin 0.57 >More info 0.44 >More info Chitin Original data GEO bulk
114 Methyl Jasmonate 0.5 h 0.51 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
115 root cells cortex 140mM NaCl 1 hour 0.49 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
116 Selenate (root) 0.50 >More info 0.50 >More info Ws (root) Original data GEO bulk
117 Root Selenate 0.50 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
118 embryo paclobutrazol 0.53 >More info 0.47 >More info embryo-control paclobutrazol embryo Original data GEO bulk
119 (Col-0)+100 uM As 0.57 >More info 0.43 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
120 root cells cortex 140mM NaCl 48 hours 0.58 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
121 Fenclorim 4hr 0.56 >More info 0.44 >More info Acetone 4hr root Original data GEO bulk
122 root callus inducing medium 96 h -0.71 >More info -0.29 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
123 Red/FR Light45min 0.20 >More info 0.80 >More info FarRed Light 45min Original data Light treatments
124 35S::PI ap3-3 35S::AP-GR +DEX 0.40 >More info 0.60 >More info 0hr DEX Original data GEO bulk
125 root Dosed gold 0.63 >More info 0.36 >More info root No gold .125 mM gold 24 h roots Original data
126 0.125 mM gold 24 h 0.63 >More info 0.36 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
127 rosettes myoox drought 0.47 >More info 0.52 >More info rosettes myoox watered Original data GEO bulk
128 upb1-1 elongation zone -0.39 >More info -0.60 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
129 bbx24 in Simulated Shade -0.51 >More info -0.47 >More info WT in simulated shade shade seedling Original data
130 Fenclorim 24hr 0.56 >More info 0.42 >More info Acetone 24hr root Original data GEO bulk
131 safener treated 0.59 >More info 0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
132 6 h SL Attim 17-1 1 -0.50 >More info -0.48 >More info 0 h Attim 17-1 1 seed Original data
133 rosette Dark Wounded 0.42 >More info 0.56 >More info rosette Dark Control Original data GEO bulk
134 FLIGHT TAGESB plate6 ROOTS 0.47 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
135 wnk8-3 untreated -0.55 >More info -0.42 >More info Col-0 untreated seedlings Original data GEO bulk
136 (Ws-2)+100 uM As 0.57 >More info 0.40 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
137 Cycloheximide 3 h 0.51 >More info 0.46 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
138 root cells endodermis and quiescent center -Fe 0.53 >More info 0.44 >More info whole roots standard Original data GEO bulk
139 K starvation (root) 0.53 >More info 0.44 >More info Ws (root) Original data GEO bulk
140 4d red light grown hmr-5 seedlings 0.50 >More info 0.47 >More info 4d red light grown WT(Col-0) seedlings Original data
141 root callus inducing medium 48 h -0.68 >More info -0.29 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
142 ABA SA 3h 0.44 >More info 0.53 >More info EtOH 3h 3hr Original data GEO bulk
143 sfr6 drought -0.36 >More info -0.61 >More info WT drought All aerial tissue Original data GEO bulk
144 RRE2 Chitin 0.55 >More info 0.41 >More info Chitin Original data GEO bulk
145 toc1-1-77hr 0.53 >More info 0.43 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
146 gai Flg22 2h 0.57 >More info 0.39 >More info Laer Flg22 2h leaf discs Original data GEO bulk
147 hsfa1 quadruple mutant heat shock -0.51 >More info -0.45 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
148 R. solani AG8 0.52 >More info 0.44 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
149 irradiated leaf (cmt 5d) 0.41 >More info 0.55 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
150 shoots bhlh100/101 0uM Fe 0.65 >More info 0.30 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
151 Root -K 0.53 >More info 0.42 >More info Control-root Original data GEO bulk
152 toc1-1-81hr 0.38 >More info 0.57 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
153 hai1-2 low water potential 0.44 >More info 0.51 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
154 whole roots 140 mM NaCl 30 minutes 0.45 >More info 0.50 >More info whole roots standard Original data GEO bulk
155 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
156 WT 24H Cold 0.53 >More info 0.41 >More info WT control Original data GEO bulk
157 rosette Light Wounded 0.43 >More info 0.51 >More info rosette Light Control Original data GEO bulk
158 toc1-1-65hr 0.41 >More info 0.53 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
159 ahg1-1 0.41 >More info 0.53 >More info ABA control Original data GEO bulk
160 OsSAP11 expressing -0.50 >More info -0.43 >More info WT seedlings Original data GEO bulk
161 Dark 44min pls RedLigh 1min 0.29 >More info 0.64 >More info Dark 45 min Original data Light treatments
162 low CO2 + light 0.42 >More info 0.51 >More info normal CO2 + light Original data GEO bulk
163 Hydrogen Peroxide 500 uM 0.41 >More info 0.52 >More info Control RB and PER Hydrogen Peroxide Original data
164 toc1-1-57hr 0.51 >More info 0.41 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
165 ANOXIA -0.51 >More info -0.41 >More info ANOXIA+SUCROSE Original data GEO bulk
166 WT 3H Cold 0.30 >More info 0.62 >More info WT control Original data GEO bulk
167 jkd-4 QC 0.41 >More info 0.51 >More info Col-0 QC Quiescent Center Original data
168 WT Seedling BL+ABA 0.62 >More info 0.29 >More info WT Seedling BL Original data GEO bulk
169 root cells cortex 140mM NaCl 20 hours 0.58 >More info 0.33 >More info root cells cortex standard 1 hour root cells cortex Original data
170 Botrytis cinerea 48h 0.54 >More info 0.36 >More info control 48h Original data GEO bulk
171 AgNO3 3 h 0.40 >More info 0.50 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
172 cat2-short-day 4d 0.36 >More info 0.54 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
173 DC3000 24h 0.38 >More info 0.52 >More info Mock 24h DC3000 Original data GEO bulk
174 shoot-10 μM DEX- 24hr 0.36 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
175 root cells columella root cap -Fe 0.58 >More info 0.32 >More info whole roots standard Original data GEO bulk
176 root cells cortex 140mM NaCl 8 hours 0.54 >More info 0.35 >More info root cells cortex standard 1 hour root cells cortex Original data
177 abi3-6 16 DAF Seed -0.51 >More info -0.38 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
178 MG132 3 h 0.38 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
179 pip3 At2g19270 TDNA 9 0.28 >More info 0.61 >More info Col-0 whole plant Original data GEO bulk
180 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
181 pil5 red light 0.60 >More info 0.29 >More info Col-0 red light Original data GEO bulk
182 toc1-1-53hr 0.30 >More info 0.59 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
183 mp-B4149 mutant IAA 0.52 >More info 0.36 >More info GR-bdl IAA Original data GEO bulk
184 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
185 bak1-3 +Pep2 10h 0.58 >More info 0.30 >More info WT +Pep2 10h Pep2 Original data GEO bulk
186 Laer treat paclobutrazol (PAC) 0.69 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
187 Col leaf scrape 5 dpi 0.51 >More info 0.36 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
188 ein2 1% sucrose 14-day-old 0.36 >More info 0.51 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
189 npr1-1 SA -0.58 >More info -0.29 >More info Col-0 SA complete seedling Original data
190 FarRed Light 4 h 0.30 >More info 0.57 >More info White Light 4 h Original data Light treatments
191 Mutant axr3-1 (IAA) 0.18 >More info 0.69 >More info Col (IAA) Original data GEO bulk
192 root callus inducing medium 24h -0.55 >More info -0.31 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
193 Mutant cry1 (High Light) -0.51 >More info -0.35 >More info Col-0 (High Light) Original data GEO bulk
194 ABA DFPM 0.50 >More info 0.36 >More info control Original data GEO bulk
195 cry1 high light -0.51 >More info -0.35 >More info Col-O high light Original data GEO bulk
196 Osmotic Stress 24 h (shoot) 0.53 >More info 0.32 >More info Stress mock 24 h (shoot) Original data Stress treatments
197 Col-0 under 4 days salt 0.51 >More info 0.34 >More info Col-0 under control 4 days salt treatment rosette Original data
198 Tsu-1 -Fe 24h 0.31 >More info 0.54 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
199 Tsu -Fe 24h Roots 0.31 >More info 0.54 >More info Tsu +Fe 24h Roots Original data GEO bulk
200 Sulfometuron EC50 0.57 >More info 0.28 >More info Carrier Original data GEO bulk
201 root longitudinal zone-4 NaCl 0.24 >More info 0.61 >More info root longitudinal zone-4 Original data GEO bulk
202 vtc2 zygotic embryo -0.31 >More info -0.53 >More info WT zygotic embryo zygotic embryo Original data GEO bulk
203 penta Control 0.59 >More info 0.25 >More info Laer Control leaf discs Original data GEO bulk
204 toc1-1-73hr 0.23 >More info 0.61 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
205 root protophloem 40 mM NaCl 0.56 >More info 0.27 >More info root protophloem Original data GEO bulk
206 6-trichlorophenoxyacetic acid 3 h 0.33 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
207 AsAKiin11 T2 0.32 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
208 AtGATA2ox 0.62 >More info 0.21 >More info Col seedling Original data GEO bulk
209 Methyl Jasmonate 3 h 0.31 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
210 WT Red light 1h 0.29 >More info 0.53 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
211 desiccated mature pollen grains -0.32 >More info -0.50 >More info hydrated pollen grains Original data GEO bulk
212 protoplasted roots pH4.6 0.57 >More info 0.25 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
213 gul2-1 bri1-5 mutant 0.57 >More info 0.25 >More info WT 7 day-old whole seedlings Original data
214 8-DAC chr11-1chr17-1 0.57 >More info 0.24 >More info 8-DAC Col-0 leaf explants Original data
215 3x(m) 0.23 >More info 0.58 >More info 2x two week old seedlings Original data
216 WT flg22 2h 0.53 >More info 0.27 >More info WT 0h Leaf tissue Original data GEO bulk
217 ptpks2 -0.24 >More info -0.56 >More info Col-WT leaves Original data GEO bulk
218 root - 04% oxygen - 2h 0.08 >More info 0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
219 Heat 6h-recover 48h -0.51 >More info -0.28 >More info Heat 6h rosettes - 5 leaves stage Original data
220 SA 4mM 0.52 >More info 0.27 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
221 -Sulfate 24 h 0.23 >More info 0.56 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
222 bri1-116 0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
223 csn5 (csn5a-2 csn5b) light 0.57 >More info 0.22 >More info WT light Original data GEO bulk
224 coi1-2 0.51 >More info 0.27 >More info Col-0 mock Whole seedling Original data GEO bulk
225 SCR-GR Time 12H Dex 0.50 >More info 0.28 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
226 Mutant axr3-1 0.18 >More info 0.60 >More info Col Original data GEO bulk
227 Root dark control 24h 0.27 >More info 0.51 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
228 cpctry 0.20 >More info 0.58 >More info Col Original data GEO bulk
229 Roots Cd -0.55 >More info -0.22 >More info Roots control Cd Root Original data GEO bulk
230 Col-0 9 hpi A. brassicicola 0.51 >More info 0.26 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
231 DFPM 0.53 >More info 0.24 >More info control Original data GEO bulk
232 penta Alternaria 3dpi 0.51 >More info 0.26 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
233 Leaf wounded 0.25 >More info 0.52 >More info Leaf control vegetative leaf Original data GEO bulk
234 seedling -S Exp 0.22 >More info 0.55 >More info seedling FN Exp seedling Original data
235 P.p 6hai 0.54 >More info 0.22 >More info At-Control roots Original data GEO bulk
236 Laer pretreat GA+JA Flg22 1h 0.50 >More info 0.26 >More info Laer pretreat water control leaf discs Original data GEO bulk
237 JA 0.24 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
238 phyB Dark 0.26 >More info 0.50 >More info WT(Ler) Dark Original data GEO bulk
239 etiolated atbzip16 0.60 >More info 0.15 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
240 ein2-1 9 hpi A. brassicicola 0.53 >More info 0.21 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
241 root - 01% oxygen - 30min 0.12 >More info 0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
242 Col BTH 0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
243 seedling h S Exp -0.11 >More info -0.63 >More info seedling -S Exp seedling Original data
244 AvrRpt2 Col-0 6hpi 0.51 >More info 0.22 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
245 shoot-10 μM DEX- 3 hr 0.50 >More info 0.22 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
246 Wounding Stress3 h (root) -0.53 >More info -0.19 >More info Stress mock 3 h (root) Original data Stress treatments
247 seedlings +5AC 0.53 >More info 0.19 >More info control seedlings 10-day old whole seedling Original data GEO bulk
248 penta MeJA 1h 0.62 >More info 0.09 >More info Laer MeJA 1h leaf discs Original data GEO bulk
249 seedling 30 min S Exp -0.21 >More info -0.50 >More info seedling -S Exp seedling Original data
250 DUO1 induced 24h 0.18 >More info 0.52 >More info 24hr-not-induced whole plant Original data GEO bulk
251 AvrRpm1 2 h (leaf) 0.55 >More info 0.14 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
252 DUO1 induced 12h 0.16 >More info 0.53 >More info 12hr-not-induced whole plant Original data GEO bulk
253 downy mildew cotyledons late stage 0.63 >More info 0.06 >More info mock inoculated Cotyledons Original data GEO bulk
254 P.p 30hai 0.55 >More info 0.13 >More info At-Control roots Original data GEO bulk
255 sex1-3 0.13 >More info 0.55 >More info Col-WT leaves Original data GEO bulk
256 Col light-light EtOH 0.61 >More info 0.07 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
257 Truncated AC2 T1 -0.50 >More info -0.17 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
258 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
259 WT Nitrate 0.5h 0.56 >More info 0.10 >More info WT untreated Original data GEO bulk
260 Leafminer damaged seedlings 0.10 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
261 downy mildew cotyledons early stage -0.53 >More info -0.12 >More info mock inoculated Cotyledons Original data GEO bulk
262 4C 1h 0.12 >More info 0.53 >More info 4C 0h Original data GEO bulk
263 ABA control 0.11 >More info 0.54 >More info No ABA control Original data GEO bulk
264 ahg2-1sid2-2 0.12 >More info 0.51 >More info WT (Col) control Original data GEO bulk
265 SIV pollen tube 0.52 >More info 0.10 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
266 SLWF infested 0.66 >More info -0.04 >More info SLWF uninfested rosette tissue Original data GEO bulk
267 35S::RSL4 -0.06 >More info -0.55 >More info Col-0 Control root Original data GEO bulk
268 CLO 4mM 0.62 >More info -0.02 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
269 WT (Col) glucose -0.03 >More info -0.56 >More info WT (Col) glucose seedlings Original data GEO bulk
270 UV Stress 24 h (shoot) 0.50 >More info 0.07 >More info Stress mock 24 h (shoot) Original data Stress treatments
271 max3GR24 (1 uM) 0.03 >More info -0.55 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
272 Chemically -0.17 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
273 WT 2-4h Xanthomonas 0.53 >More info -0.02 >More info WT T0 Original data GEO bulk
274 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
275 triploid female excess 0.05 >More info -0.53 >More info tetraploid Original data GEO bulk
276 root - 04% oxygen - 30min -0.03 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
277 seed germinating in countinuous light 24h SL -0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
278 +1.6 mM Tween 20 1 h. 0.63 >More info -0.18 >More info +distilled water 1 h. Original data GEO bulk
279 Cs root 0.14 >More info -0.59 >More info control root Original data GEO bulk
280 root longitudinal zone-1 -Fe -0.09 >More info 0.52 >More info root longitudinal zone-1 standard Original data GEO bulk
281 Norflurazon 0.58 >More info -0.15 >More info Col-0 Original data GEO bulk
282 Norflurazon 0.58 >More info -0.15 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
283 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
284 root - 08% oxygen - 30min -0.14 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
285 Shoot apex inflorescence (after bolting) -0.28 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
286 DUO1 induced 6h -0.17 >More info 0.54 >More info 6hr-not-induced whole plant Original data GEO bulk
287 4d red light grown hmr-22 seedlings 0.54 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data