4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Aerobic e1 ate2
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List of experiments correlated with "Aerobic e1 ate2"  Help Download transcriptome of top 30
Score Experiment Correlation from
Aerobic e1 ate2		 Correlation to
Aerobic e1 ate2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Aerobic e1 ate2 1.00 >More info 1.00 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
2 Hypoxic e1 ate 0.84 >More info 0.87 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
3 Aerobic prt6 0.83 >More info 0.85 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
4 root - 04% oxygen - 48h 0.81 >More info 0.81 >More info root - 21% oxygen - 48h Original data GEO bulk
5 root - 04% oxygen - 2h 0.78 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
6 root - 08% oxygen - 2h 0.75 >More info 0.80 >More info root - 21% oxygen - 2h Original data GEO bulk
7 Hypoxic prt6 0.76 >More info 0.77 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
8 root - 08% oxygen - 30min 0.69 >More info 0.82 >More info root - 21% oxygen - 30min Original data GEO bulk
9 MPK6 ox Shoot Hypoxia 0.67 >More info 0.81 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
10 root - 01% oxygen - 48h 0.76 >More info 0.71 >More info root - 21% oxygen - 48h Original data GEO bulk
11 root - 01% oxygen - 2h 0.78 >More info 0.69 >More info root - 21% oxygen - 2h Original data GEO bulk
12 shoot hypoxia total 0.75 >More info 0.70 >More info shoot control total Original data GEO bulk
13 root - 04% oxygen - 30min 0.66 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
14 WT Shoot Hypoxia 0.73 >More info 0.69 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
15 Col-0 wt Hypoxic 0.80 >More info 0.61 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
16 Col-0 2HS 0.75 >More info 0.63 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
17 root - 01% oxygen - 30min 0.67 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
18 root - 08% oxygen - 48h 0.68 >More info 0.68 >More info root - 21% oxygen - 48h Original data GEO bulk
19 MPK6 ox Root Hypoxia 0.68 >More info 0.68 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
20 WT Root Hypoxia 0.71 >More info 0.61 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
21 Stem tissue 5 days NAA 0.72 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
22 mdh -0.75 >More info -0.52 >More info Col Original data GEO bulk
23 35S:PCO1 hypoxia -0.61 >More info -0.65 >More info WT hypoxia whole rosette Original data
24 mbd4 mutant thaliana 10-day-old seedling 0.80 >More info 0.45 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
25 root hypoxia total 0.72 >More info 0.52 >More info root control total Original data GEO bulk
26 20m.KCl -0.73 >More info -0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
27 pepr1-1 Pepr2-3 untreated 0.61 >More info 0.62 >More info WT untreated untreated Original data GEO bulk
28 aerial organ callus inducing medium 12 h 0.62 >More info 0.59 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
29 Col upon hypoxia 6 hrs 0.80 >More info 0.40 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
30 TA induced 0.66 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
31 Mutant iaa5_6_19 0.76 >More info 0.44 >More info Col Original data GEO bulk
32 9 hr Hypoxia IP RNA 0.77 >More info 0.41 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
33 Drought Stress 24 h (root) -0.61 >More info -0.56 >More info Stress mock 24 h (root) Original data Stress treatments
34 ein2 mutant roots mock -0.62 >More info -0.55 >More info roots mock Original data GEO bulk
35 aerial organ callus inducing medium 96 h 0.73 >More info 0.44 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
36 2 hr Hypoxia IP RNA 0.73 >More info 0.43 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
37 PRR5-VP 12h light on -0.78 >More info -0.37 >More info WT 12h light on whole plant Original data GEO bulk
38 ubc13A-es -0.70 >More info -0.45 >More info Col-es root Original data GEO bulk
39 2 hr Hypoxia Total RNA 0.75 >More info 0.39 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
40 Col-0 low oxygen 0.70 >More info 0.44 >More info Col-0 Original data GEO bulk
41 seed germinating in countinuous light 24h SL 0.45 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
42 roottip hypoxia total 0.69 >More info 0.43 >More info roottip control total Original data GEO bulk
43 Te 3d 0.65 >More info 0.46 >More info Te CA Leaves Original data
44 Mutant iaa5_6_19(IAA) 0.64 >More info 0.46 >More info Col (IAA) Original data GEO bulk
45 ago4-1 0.65 >More info 0.44 >More info WT La-er whole plants Original data GEO bulk
46 PNO8 12 h -0.66 >More info -0.43 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
47 Seedling KUA1-IOX est 0.72 >More info 0.36 >More info Seedling KUA1-IOX mock Original data
48 mbd6 mutant thaliana 10-day-old seedling 0.68 >More info 0.40 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
49 DFPM 0.65 >More info 0.43 >More info control Original data GEO bulk
50 Col BTH 0.41 >More info 0.67 >More info Col rosettes Original data GEO bulk
51 8 hr ammonium 0.77 >More info 0.30 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
52 Ws seedlings -0.73 >More info -0.31 >More info ged1 seedlings Original data GEO bulk
53 ged1 seedlings 0.73 >More info 0.31 >More info Ws seedlings Original data GEO bulk
54 Col 3d 0.54 >More info 0.49 >More info Col CA Leaves Original data
55 aerial organ callus inducing medium 24h 0.51 >More info 0.52 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
56 npr1-1 SA -0.65 >More info -0.37 >More info Col-0 SA complete seedling Original data
57 prt6-1 0.70 >More info 0.32 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
58 9 hr Hypoxia Total RNA 0.75 >More info 0.27 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
59 GV3101 6dpi 0.67 >More info 0.35 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
60 edr1 36 h powdery mildew 0.52 >More info 0.50 >More info Col-0 36 h powdery mildew Original data GEO bulk
61 9 hr Hypoxia 1 hr recovery IP RNA 0.67 >More info 0.35 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
62 P.p 6hai 0.67 >More info 0.34 >More info At-Control roots Original data GEO bulk
63 mil4 BTH 0.61 >More info 0.40 >More info Col BTH rosettes Original data GEO bulk
64 Norflurazon 0.61 >More info 0.40 >More info Col-0 Original data GEO bulk
65 seedlings protease IV 0.59 >More info 0.42 >More info seedlings nontreated control whole seedling Original data
66 1.5 hr ammonium 0.73 >More info 0.28 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
67 rao2 H2O2 3h -0.55 >More info -0.46 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
68 Norflurazon 0.61 >More info 0.40 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
69 Mutant arf2-6 (IAA) -0.48 >More info -0.53 >More info Col (IAA) Original data GEO bulk
70 P.p 10.5hai 0.67 >More info 0.33 >More info At-Control roots Original data GEO bulk
71 pnp1-1 1wk +P 0.59 >More info 0.41 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
72 Prohexadione 3 h -0.72 >More info -0.28 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
73 SCR-GR Time 1H Dex 0.38 >More info 0.62 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
74 ice1 6H Cold 0.53 >More info 0.46 >More info WT 6H Cold Original data GEO bulk
75 aerial organ callus inducing medium 48 h 0.55 >More info 0.44 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
76 Col0-PsmES4326-24hpi 0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
77 edr1 18 h powdery mildew 0.49 >More info 0.50 >More info Col-0 18 h powdery mildew Original data GEO bulk
78 Col-0 9 hpi A. brassicicola 0.41 >More info 0.58 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
79 shoots bhlh100/101 0uM Fe 0.58 >More info 0.40 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
80 pnp1-1 3h +P 0.59 >More info 0.39 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
81 Sulfometuron EC50 0.42 >More info 0.56 >More info Carrier Original data GEO bulk
82 JMJ24 knockout 0.67 >More info 0.30 >More info WT Original data GEO bulk
83 Col-0 flu HL 0h -0.64 >More info -0.33 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
84 ein2-1 +Pep2 2h -0.55 >More info -0.41 >More info WT +Pep2 2h Pep2 Original data GEO bulk
85 phr1 Shoot-Pi -0.63 >More info -0.33 >More info WT Root-Pi shoots Original data GEO bulk
86 0.2µM SMX -0.64 >More info -0.32 >More info control Whole seedling Original data GEO bulk
87 ga1-3/brm-1 0.76 >More info 0.20 >More info wt shoots Original data GEO bulk
88 WT 1wk -P 0.55 >More info 0.41 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
89 ANAC102 knock-out 0.55 >More info 0.41 >More info Col-0 Original data GEO bulk
90 seedlings-week-old RECA1-overexpressing
transgenic		 0.50 >More info 0.46 >More info seedlings-week-old Col-0 seedlings Original data
91 HopZ1a treated 0.52 >More info 0.44 >More info col Original data GEO bulk
92 Shoot submergence 24h 0.62 >More info 0.33 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
93 ein2 mutant roots IAA -0.57 >More info -0.38 >More info roots ethylene Original data GEO bulk
94 tumour 0.57 >More info 0.38 >More info non-tumor tumour Original data GEO bulk
95 GO5; 0h switch to ambient CO2 concentrations; -0.50 >More info -0.44 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
96 ARR22-ox (t-zeatin 3 h) 0.57 >More info 0.37 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
97 hypoxic 0.67 >More info 0.26 >More info WT aerobic hypoxia Original data GEO bulk
98 sicy-192 gun1-101 cotyledons 0.54 >More info 0.39 >More info WT cotyledons cotyledons Original data
99 mbd11 mutant thaliana 10-day-old seedling 0.64 >More info 0.29 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
100 SCR-GR Time 12H Dex 0.57 >More info 0.36 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
101 shoots bhlh100/101 100uM Fe 0.64 >More info 0.29 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
102 OE-HRA1 2HS  -0.55 >More info -0.37 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
103 cngc1-3 0.67 >More info 0.25 >More info Col-0 root Original data GEO bulk
104 CLO 4mM 0.36 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
105 C58 6dpi 0.61 >More info 0.31 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
106 TAMM27 roots 2hr KCl control -0.55 >More info -0.36 >More info Col0 roots 2hr KCl control root Original data GEO bulk
107 GST NPP1 4 h (leaf) 0.38 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
108 dense canopy 0.39 >More info 0.52 >More info single (control) petiole Original data GEO bulk
109 Light 0.65 >More info 0.25 >More info Control Original data GEO bulk
110 Tsu-1 -Fe 48h 0.68 >More info 0.22 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
111 Tsu -Fe 48h Roots 0.68 >More info 0.22 >More info Tsu +Fe 24h Roots Original data GEO bulk
112 siliques AtHb1 control 0.38 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
113 Tsu -Fe 24h Roots 0.60 >More info 0.30 >More info Tsu +Fe 24h Roots Original data GEO bulk
114 Tsu-1 -Fe 24h 0.60 >More info 0.30 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
115 albino Ds13-2198-1 -0.56 >More info -0.33 >More info control Original data GEO bulk
116 E.coli TUV86 2 fliC 7h 0.34 >More info 0.55 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
117 9 hr Hypoxia 1 hr recovery Total RNA 0.73 >More info 0.16 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
118 msh1 albino 0.38 >More info 0.51 >More info WT aerial part Original data GEO bulk
119 Genotoxic Stress 3 h (root) -0.70 >More info -0.19 >More info Stress mock 3 h (root) Original data Stress treatments
120 P.p 2.5hai 0.69 >More info 0.20 >More info At-Control roots Original data GEO bulk
121 toc1-1-85hr -0.29 >More info -0.60 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
122 Glyphosate EC50 0.33 >More info 0.55 >More info Carrier (Glyphosate) Original data GEO bulk
123 HSP90 Reduced RNAi-C1 0.67 >More info 0.21 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
124 gun1gun5 far-red pretreated -0.64 >More info -0.24 >More info WT far-red pretreated Original data GEO bulk
125 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
126 iron minus 24h -0.70 >More info -0.18 >More info iron +24h root Original data GEO bulk
127 seedlings + TSA 0.56 >More info 0.31 >More info control seedlings 10-day old whole seedling Original data GEO bulk
128 scl3 0.55 >More info 0.32 >More info Col-0 whole root Original data GEO bulk
129 35S::ERF104 Flg22 4h 0.32 >More info 0.55 >More info 35S::ERF104 H2O 4h Original data GEO bulk
130 Var2-1 roots 2hr KCl control -0.62 >More info -0.25 >More info Col0 roots 2hr KCl control root Original data GEO bulk
131 Cs root -0.76 >More info -0.11 >More info control root Original data GEO bulk
132 bHLH122 ox -0.37 >More info -0.50 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
133 Mutant ap1-15(shoot apex) 0.58 >More info 0.29 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
134 ice1 control 0.54 >More info 0.32 >More info WT control Original data GEO bulk
135 WT seedlings NaCl -0.34 >More info -0.52 >More info WT seedlings control Seedlings Original data GEO bulk
136 bak1-3 untreated 0.69 >More info 0.17 >More info WT untreated untreated Original data GEO bulk
137 Cambium 5 days NAA 0.62 >More info 0.24 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
138 Brz220 12 h -0.54 >More info -0.31 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
139 ACC 3 h 0.51 >More info 0.34 >More info Mock 3 h Original data Basic hormone treatment of seedlings
140 Triazolopyrimidine EC50 0.31 >More info 0.54 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
141 Mutant iaa17-6 0.59 >More info 0.26 >More info Col Original data GEO bulk
142 Ts5 roots 2hr KNO3 nitrogen -0.59 >More info -0.26 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
143 +1.6 mM Tween 20 1 h. 0.26 >More info 0.59 >More info +distilled water 1 h. Original data GEO bulk
144 shoot control pRBCS 0.51 >More info 0.33 >More info shoot control total Original data GEO bulk
145 1.5 hr nitrate 0.68 >More info 0.16 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
146 root longitudinal zone-1 low sulfur -0.54 >More info -0.30 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
147 FOX line K19624 0.50 >More info 0.34 >More info empty vector control (T3) FOX lines Original data GEO bulk
148 IMI 4mM 0.52 >More info 0.32 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
149 col-5 hrpA 12h 0.31 >More info 0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
150 CT101 ozone 0.60 >More info 0.24 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
151 Mutant ap2-6(shoot apex) 0.58 >More info 0.26 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
152 IRP1-OE-Ctrl--shoot 0.63 >More info 0.21 >More info COL-0-Ctrl--shoot shoot Original data
153 roots ethylene 0.54 >More info 0.29 >More info roots air Original data GEO bulk
154 Kas2 roots 2hr KCl control -0.50 >More info -0.33 >More info Col0 roots 2hr KCl control root Original data GEO bulk
155 Elevated CO2 expanding leaf 0.31 >More info 0.52 >More info Ambient CO2 expanding leaf expanding leaf Original data
156 Col-0 SA 0.62 >More info 0.21 >More info Col-0 water complete seedling Original data
157 WT hypoxia 0.62 >More info 0.21 >More info WT normoxia whole rosette Original data
158 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.62 >More info 0.21 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
159 OE WRKY63.3 high light 0.52 >More info 0.30 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
160 Elevated CO2 leaf primordia 0.51 >More info 0.31 >More info Ambient CO2 leaf primordia leaf primordia Original data
161 hrcC 0.30 >More info 0.52 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
162 WT 2-4h Xanthomonas 0.20 >More info 0.62 >More info WT T0 Original data GEO bulk
163 ALC Toc1 light-light Mock -0.57 >More info -0.25 >More info Col light-light Mock no ethanol Original data GEO bulk
164 dde2-2 9 hpi A. brassicicola 0.25 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
165 myb50 xylem 0.66 >More info 0.15 >More info wt xylem xylem Original data GEO bulk
166 IRP1-OE-Fe--shoot 0.51 >More info 0.30 >More info COL-0-Fe--shoot shoot Original data
167 Laer treat paclobutrazol (PAC) 0.52 >More info 0.29 >More info Laer Control leaf discs Original data GEO bulk
168 rcf1-1 cold 0h 0.54 >More info 0.27 >More info WT cold 0h Control seedlings Original data GEO bulk
169 Flagellin 4 h (leaf) 0.30 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
170 gun4-1 0.57 >More info 0.24 >More info WT Col-0 seedling Original data GEO bulk
171 C24 ozone 0.58 >More info 0.23 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
172 SHR-GR Time 12H Dex -0.24 >More info -0.57 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
173 NAA -AA 0.50 >More info 0.30 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
174 erf5 erf6 0.56 >More info 0.24 >More info WT+water water seedlings Original data GEO bulk
175 phyABDE Rc50 -0.54 >More info -0.26 >More info phyABDE Dark red light whole seedling Original data GEO bulk
176 Nicotinamide-49hr 0.29 >More info 0.51 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
177 cngc1 -0.59 >More info -0.21 >More info Ws-2 Seedlings Original data GEO bulk
178 C58 35dpi 0.58 >More info 0.22 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
179 Leaf wounded 0.23 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
180 afb3-1 2h KCl -0.66 >More info -0.13 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
181 gai Control 0.61 >More info 0.18 >More info Laer Control leaf discs Original data GEO bulk
182 R. amphibia submerged 0.57 >More info 0.22 >More info R. amphibia air Original data GEO bulk
183 aux1 mutant roots air -0.50 >More info -0.28 >More info roots IAA Original data GEO bulk
184 flu over-tAPX 0.27 >More info 0.51 >More info WT Col Original data GEO bulk
185 gpa1 -ABA LF 0.24 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
186 hrpA 7h 0.27 >More info 0.51 >More info Mock 7h hrpA Original data GEO bulk
187 Cor hrpS 10h 0.28 >More info 0.50 >More info Mock 10h Cor hrpS Original data GEO bulk
188 Col-0 35S:MBS1 HL 3h -0.21 >More info -0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
189 RRE2 Chitin 0.57 >More info 0.20 >More info Chitin Original data GEO bulk
190 hira-protoplast -0.56 >More info -0.21 >More info WT-protoplast protoplast Original data
191 ckh2 CK25 0.60 >More info 0.17 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
192 WT seedlings MV 0.62 >More info 0.15 >More info WT seedlings control Seedlings Original data GEO bulk
193 cys-c1 root 0.62 >More info 0.15 >More info Root-WT roots Original data GEO bulk
194 pnp1-1 1wk -P 0.53 >More info 0.24 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
195 Root submergence 24h 0.66 >More info 0.11 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
196 9m.KCl 0.58 >More info 0.19 >More info To. KCl 14 day old Roots Original data GEO bulk
197 hrpA fliC 7h 0.22 >More info 0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
198 Col in Pi deficiency medium 0.51 >More info 0.25 >More info Col in control medium root Original data GEO bulk
199 cys-c1 leaf -0.51 >More info -0.25 >More info Leaf-WT leaves Original data GEO bulk
200 dsr1 -0.71 >More info -0.05 >More info WT mock Whole seedling Original data GEO bulk
201 spx1 spx2 complete -0.71 >More info -0.04 >More info WT complete seedlings Original data
202 msg2-BR 0.58 >More info 0.17 >More info BR BR dark-grown seedlings Original data GEO bulk
203 det2 light-dark -0.54 >More info -0.21 >More info det2 light light-dark Original data GEO bulk
204 Pseudomonas 0.63 >More info 0.12 >More info Control pseudomonas treated whole seedling Original data GEO bulk
205 Var2-1 roots 2hr KNO3 nitrogen -0.50 >More info -0.25 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
206 ckh2 CK0 0.53 >More info 0.21 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
207 Shoot submergence 7h 0.74 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
208 Est 0.61 >More info 0.13 >More info Col-0 Original data GEO bulk
209 light -0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
210 R. sylvestris submerged 0.59 >More info 0.15 >More info R. sylvestris air Original data GEO bulk
211 ABA SA 24h 0.13 >More info 0.61 >More info EtOH 24h 24hr Original data GEO bulk
212 ABA JA 24h 0.17 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
213 UV Stress 24 h (root) -0.64 >More info -0.09 >More info Stress mock 24 h (root) Original data Stress treatments
214 ani1 T16 -0.71 >More info -0.02 >More info WT T16 root tissue Original data GEO bulk
215 35S-MIF1 dark grown 0.52 >More info 0.21 >More info Dark-grown WT control Original data GEO bulk
216 ahg2-1abi1-1 0.55 >More info 0.18 >More info WT (Col) control Original data GEO bulk
217 cngc19 0.66 >More info 0.07 >More info Col-0 root Original data GEO bulk
218 GST 4 h (leaf) 0.21 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
219 cpctry -0.19 >More info -0.54 >More info Col Original data GEO bulk
220 Laer pretreat GA+JA Flg22 0h 0.50 >More info 0.22 >More info Laer pretreat water control leaf discs Original data GEO bulk
221 Col-0 root drought 0.54 >More info 0.18 >More info Col-0 root water root Original data GEO bulk
222 estradiole-induced ANAC059 -0.51 >More info -0.21 >More info transgenic (empty vector inducible system) Original data GEO bulk
223 pvip1 pvip2 seedling 0.74 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
224 IAA 1 h 0.14 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
225 L2.5 mutant -0.55 >More info -0.16 >More info Wt Original data GEO bulk
226 Leafminer damaged seedlings 0.15 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
227 Callus 0.63 >More info 0.08 >More info Control for tissue data callus Original data GEO bulk
228 hog1-7 0.57 >More info 0.14 >More info wt whole seedling Original data GEO bulk
229 whole roots -Fe 48 hour 0.57 >More info 0.14 >More info whole roots standard Original data GEO bulk
230 mutant-line774 0.57 >More info 0.14 >More info WT-control whole plant Original data GEO bulk
231 whole roots -Fe 72 hour 0.59 >More info 0.11 >More info whole roots standard Original data GEO bulk
232 WT Bc inoculation 14h 0.52 >More info 0.18 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
233 Fe starvation 72 h 0.59 >More info 0.11 >More info Control Original data GEO bulk
234 Root submergence 7h 0.60 >More info 0.10 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
235 ddm1 mutant seedlings -0.76 >More info 0.06 >More info control seedlings 10-day old whole seedling Original data GEO bulk
236 Wounding Stress3 h (root) -0.57 >More info -0.12 >More info Stress mock 3 h (root) Original data Stress treatments
237 B.cinerea 18 h infection 0.11 >More info 0.58 >More info Mock 18 h Original data Botrytis cinerea infection
238 Botrytis cinerea 18h 0.11 >More info 0.58 >More info control 18h Original data GEO bulk
239 seedling 30 min S Exp 0.19 >More info 0.50 >More info seedling -S Exp seedling Original data
240 siliques WT hypoxia 0.67 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
241 Te ozone 0.52 >More info 0.16 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
242 amiRAP aerobic -0.17 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
243 KCl germinant -0.60 >More info -0.08 >More info Millipore Water germinant KCl seedling Original data
244 cngc4 0.50 >More info 0.18 >More info Ws-2 Seedlings Original data GEO bulk
245 sav1-1 shade 0.18 >More info 0.50 >More info Col-0 shade seedlings Original data GEO bulk
246 elevated CO2 low Mg root -0.50 >More info -0.17 >More info atmospheric CO2 low Mg root Root Original data
247 CCA1-ox 6am non-polysomal 0.16 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
248 bbx24 in Simulated Shade 0.05 >More info 0.62 >More info WT in simulated shade shade seedling Original data
249 FHY3p dark+DEX -0.52 >More info -0.14 >More info FHY3p dark+mock Original data GEO bulk
250 root longitudinal zone-3 pH 4.6 -0.09 >More info -0.57 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
251 Col-0 low oxygen 0.64 >More info 0.01 >More info Col-0 control low oxygen root Original data GEO bulk
252 HSP90 Reduced Salk hsp90.1 -0.54 >More info -0.11 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
253 Kas -Fe 24h Shoots -0.55 >More info -0.10 >More info Kas +Fe 24h Shoots Original data GEO bulk
254 Est SA 0.56 >More info 0.09 >More info Col-0 SA Original data GEO bulk
255 mpk6-ko Flg22 4h 0.12 >More info 0.52 >More info mpk6-ko H2O 4h Original data GEO bulk
256 E.coli 0157 H7 7h 0.12 >More info 0.52 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
257 Heat Recovery 24 h (root) -0.70 >More info 0.06 >More info Stress mock 24 h (root) Original data Stress treatments
258 RGA-GR-DEX 0.57 >More info 0.07 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
259 HSP90 Reduced RNAi-B1 0.53 >More info 0.10 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
260 elevated CO2 normal Mg root -0.50 >More info -0.12 >More info atmospheric CO2 normal Mg root Root Original data
261 msg2 0.57 >More info 0.05 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
262 Shoot apex inflorescence (after bolting) -0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
263 Ts5 roots 2hr KCl control -0.55 >More info -0.06 >More info Col0 roots 2hr KCl control root Original data GEO bulk
264 MYB51 OE -0.51 >More info -0.10 >More info WT for ATR1/MYB51 Original data GEO bulk
265 intact root control 0.52 >More info 0.09 >More info Control for tissue data mock whole root Original data GEO bulk
266 PRR5-VP 6h light on -0.63 >More info 0.02 >More info WT 6h light on whole plant Original data GEO bulk
267 del1-1 mutant 5d uninfected 0.09 >More info 0.52 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
268 F1 hybrid submerged 0.57 >More info 0.03 >More info F1 hybrid air Original data GEO bulk
269 hira-root -0.52 >More info -0.08 >More info WT-root root Original data
270 erf5 erf6 +chitooctaose 0.52 >More info 0.08 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
271 Col-0 mbs1-1 HL 0h 0.50 >More info 0.10 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
272 Truncated AC2 T1 -0.63 >More info 0.04 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
273 elevated CO2 high Mg root -0.54 >More info -0.04 >More info atmospheric CO2 high Mg root Root Original data
274 clf-28 swn-7 0.59 >More info -0.01 >More info Col whole plant Original data GEO bulk
275 mutant-line409 0.63 >More info -0.06 >More info WT-control whole plant Original data GEO bulk
276 arr-BA-sample 0.57 >More info -0.00 >More info Wt-BA-sample seedling Original data
277 phr1 Root-Pi -0.58 >More info 0.01 >More info WT Root+Pi roots Original data GEO bulk
278 CeO2 germinant -0.65 >More info 0.10 >More info Millipore Water germinant CeO2 seedling Original data
279 20m.KNO3 -0.54 >More info -0.01 >More info To. KNO3 14 day old Roots Original data GEO bulk
280 piffq 3d WL 0.51 >More info 0.04 >More info WT 3d WL whole seedling Original data GEO bulk
281 R. solani AG8 0.56 >More info -0.01 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
282 agb1 -ABA LF 0.02 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
283 etr1 1% sucrose 12-day-old 0.58 >More info -0.03 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
284 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
285 Mutant cry1 -0.75 >More info 0.21 >More info Col-0 Original data GEO bulk
286 cry1 low light -0.75 >More info 0.21 >More info Col-O low light Original data GEO bulk
287 sni1 0.04 >More info 0.50 >More info WT Original data GEO bulk
288 abi4-102 +lincomycin -0.51 >More info -0.02 >More info Col-0 +lincomycin Original data GEO bulk
289 IAA 24h 0.53 >More info -0.01 >More info control 24h root Original data GEO bulk
290 Red Light 45min -0.03 >More info 0.55 >More info White Light 45min Original data Light treatments
291 DC3000 hrcC 2 h (leaf) 0.01 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
292 Laer pretreat GA Flg22 1h -0.19 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
293 Mutant ga1-5 0.57 >More info -0.06 >More info Ler-1 Original data Comparison of plant hormone related mutant
294 IAA/inhibitor A Treated 0.51 >More info -0.01 >More info IAA Treated Original data GEO bulk
295 brat1 0.52 >More info -0.02 >More info WT Original data
296 24h +Pi -0.54 >More info 0.04 >More info 24h -Pi root Original data GEO bulk
297 6m.KNO3 -0.51 >More info 0.01 >More info To. KNO3 14 day old Roots Original data GEO bulk
298 Sha-1h IAA -0.60 >More info 0.11 >More info Sha-0h IAA whole plant Original data GEO bulk
299 empty vector IAA Treated -0.52 >More info 0.04 >More info empty vector mock Original data GEO bulk
300 toc1-1-65hr 0.57 >More info -0.10 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
301 sdg2 -0.62 >More info 0.15 >More info wt seedling Original data GEO bulk
302 35S::ZAT12 -0.54 >More info 0.08 >More info gl1 Original data GEO bulk
303 piffq FR 24h 0.51 >More info -0.05 >More info WT FR 24h whole seedling Original data GEO bulk
304 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.69 >More info 0.23 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
305 gai Flg22 2h 0.50 >More info -0.05 >More info Laer Flg22 2h leaf discs Original data GEO bulk
306 FarRed Light 45min -0.09 >More info 0.53 >More info White Light 45min Original data Light treatments
307 oas-a1.1 root -0.57 >More info 0.13 >More info WT-Untreated Root Original data GEO bulk
308 BI-1-30min IAA -0.56 >More info 0.13 >More info BI-1-0h IAA whole plant Original data GEO bulk
309 Nuclear GSH1 -0.56 >More info 0.13 >More info Cytoplasmic GSH1 Control Original data GEO bulk
310 ckh1 CK25 0.54 >More info -0.11 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
311 Col-0 INA 48h -0.10 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
312 whole roots 140 mM NaCl 4 hour 0.09 >More info -0.52 >More info whole roots standard Original data GEO bulk
313 iron minus 6 h -0.59 >More info 0.16 >More info iron +6 h root Original data GEO bulk
314 Col-O high light 0.58 >More info -0.15 >More info Col-O bule light Original data GEO bulk
315 P-chlorophenoxy- isobutyric acid 3 h -0.52 >More info 0.10 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
316 gun1gun5 Norflurazon 0.60 >More info -0.18 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
317 Col-0 WT HL 3h -0.57 >More info 0.15 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
318 SHR-GR Time 3H Dex 0.14 >More info -0.55 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
319 vtc2 day 7 induction 0.51 >More info -0.11 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
320 Sha-3h IAA -0.56 >More info 0.17 >More info Sha-0h IAA whole plant Original data GEO bulk
321 Mutant axr3-1 0.58 >More info -0.19 >More info Col Original data GEO bulk
322 mutant-line348 0.56 >More info -0.18 >More info WT-control whole plant Original data GEO bulk
323 9m.KNO3 -0.63 >More info 0.25 >More info To. KNO3 14 day old Roots Original data GEO bulk
324 Heat shock optimum -0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
325 PBZ 0.52 >More info -0.16 >More info none PBZ Rosette Original data GEO bulk
326 WT cold 24h -0.54 >More info 0.19 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
327 root cells epidermis 140mM NaCl 20 hours 0.52 >More info -0.18 >More info root cells epidermis standard 1 hour root cells epidermis Original data
328 15m.KNO3 -0.53 >More info 0.19 >More info To. KNO3 14 day old Roots Original data GEO bulk
329 Bay-0-3h IAA -0.51 >More info 0.17 >More info Bay-0-0h IAA whole plant Original data GEO bulk
330 4d red light grown hmr-22 seedlings 0.51 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
331 WT cold 12 h -0.50 >More info 0.20 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
332 WT +elf18 2h -0.56 >More info 0.27 >More info WT untreated elf18 Original data GEO bulk
333 Col-O low light 0.53 >More info -0.24 >More info Col-O bule light Original data GEO bulk
334 12m.KNO3 -0.59 >More info 0.30 >More info To. KNO3 14 day old Roots Original data GEO bulk
335 ANOXIA 0.32 >More info -0.57 >More info ANOXIA+SUCROSE Original data GEO bulk
336 TNT-seedlings 0.59 >More info -0.38 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
337 myb3 myb3r4d -0.69 >More info 0.58 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
338 ACN1-2 Sucrose -0.53 >More info 0.43 >More info Col-7 Sucrose Original data GEO bulk